MELO3C020832 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C020832
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	L-amino-acid oxidase
Location	chr11 : 3668544 .. 3671250 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCTAATTGGGTCTACGACGTTGGGAATTGGAAGTTCCATTTCCTACAAATGTCACTTCTCGAACAGTCTGCGACGTGGGTTTTACAGTAAAGCTCATTCTAAACACCTATGTGTTAATGGAGGAGAGGATGGAAAGAAGAAAAGGGTCGTCGTCGTTGGCTCCGGTTGGGCTGGCCTTGCCGCTGCTAATCACCTCTGCAATCAGGTTCTTTTTGAAGAAAAGTTGCAAAGGAACATAGGAAAGGGAGAGGAAGAATAATAAATTAGTATAGCAGTCCATATTAACTTCCTAGCTCTCTGAGTCTCTACCTTGGTGCCAGTGTCAGTTTAACTGGTGAAATTTAGCTTCATCAATCAGTATAAGATTTTGGATCGGTGATTTAGCATGTTATTAATGGAAGACCTGTATTGTTATTGATGGTTTAATTTAACATGGTACAAGAGGACATCCGCGAATTTAGTATAGGTCTAGGATCGAGCCCTCAACTTTATCATCTTTATATAATATATAAAAATATTATTTAGTTATGCGTTTGTTAGCCCTTTTCAACCCAGATTCAAGTATCAAATTTTCTGCATTCGCCACTGAGAGAGGGAGTGTTATTAAAGTTCACTCGTCAGCTTTAAGTTTTGTAGTCGGTCGTTGATTTAACGTAGTACCGAAGCGATTTAACATTTTATGAAAGCAAGAAGTACAACTCCTATTATTTTATCTTCGACCGATGTTGATTCAATCGGTGGTTTAATAATTTTGGGTCAATAAGGGATTTAACAATATTTTTCTTACTATTTTATCTTGGATGCAGTCGAGTACTGAATATGATTTGATTAATGTTGAATGGAGTTTCTGTTGCAGGGATTTGATACCACTGTTCTTGAACCAAGCAATAATTTTGGTGGTGCTGATATTCATGGAATTCGTGGTAATAACCAAATGTGTTTGTTTAGGATCGATTTAGTAGTGTTCTTGTTTCCTATTTGTTTTTCACAGAAATAAGAATGTGAGTGTTACCAAGCAAGCACTTAATTTGTTGTTTCTGTAGATATATATGCTTGGTTTACTTATGTTTTGGATTGTTATATATTTTCGCAGTCCTGGTAATGTTTCATCCTGTTGTAGGTTACTGGCGTCCCTATAAGAATATATTTGGCCTCGTTGATGAGCTTGGTATCGCTCCTTTCACAAACTGGACAGCACCTGCTCATTATTCAGTTGACGGGTTGGAGGTAGATAGTACATAATAATTTTTTCAATCATTGATGAAATACCGAGACTCTCTGATCGATAAATTAATTTCCAATAGTTCCAAGTTTCATATTAGTCCATATACATTTATGTGTTCATCGATCTTGCAGTTAATTAGTTTTGAGGCTTGTTACTTTGAATTGTGTTGTGAATCGTGATGGCGATGTAGTTCTTGTGTAGGTAAAATTTCCACTATTCCAAGATCTGCCTCAACTGCCAACTCCTCTCGGAACCTTAATTTATCCAGAAGTATGGATAGCTTCACGTTTTCATGTCTCCACAATTGATTGCATAGTTTAAAATGGTCTTATGAAAACAACCTCCCTTTTGGTCCTTTTGGTCACAGTTCCCCCAGCTCCCGTTGTTGGATAGGTTAACATCACTTCTTTTGATGGCTGCAGGTGCATTTCTTTCGCATTTCAATATAGATAGTTCACAATGTATAGAAAAATTTCACATTAAAAATGAAATTTCCAACTAAAGCATTCTCAATTGGTTGAGGTTTTGGTCAACATGTTCGATTCTCCCCTTTGGTTAGTTCCTAGTATGCTCTCTTGTGTGAAACAGAACATAAAATGTTGGATTTTTTCTTATGCAATAAGTTAAAGCATGATTATAATTCATGGTAATTACGATTTTTAATTGTGCAAACGCATACCAAGTACAACACACTAACTTCTAAATTTCCAATGCATTCTTTATTCTATTTGGATCATCCATCATTGAAGGTCAACGAAGGAATATATTTGTTACAAGTGATTTATGTATTTCTCCCACTTCTTTATTTTGCTGAATTTTGTTTCTTTCAGTTATTGACTTCGACAATACGGATACGGCATGGAGAAAATATGACTCAAGTAATATCTTTGTTACCTGTGTAGACTCTTGGTAGTGGACTAATGCAAAATGAAGTGACTGATCAATAGTTGTTTCTCGCCGATAGTTACCGCCCGGGAGCTATTCAGGCAGTTTAGCTGTTCAGGAAAGCTCTATAGTAGCATACTCAATCCATTGCTTCAAGTAGGATTATATGCTCCAGCCGAGCAGTGCAGTGCTGCAGCAACCTTGGGAATTTTATACTACACTATACTTGCTCACCAGGTTTGGAGAATCAAGTTACTCCGACCAACATTCCTGCTTCTTCTGTTGCTAATAATGTCAACGTTCTGTACTCTAAACTCGTGGATGCATGCAGAATGATTTCAATCTAGTTTGGTGCCGTGGAACTGTTAAAGAAAGGATTTTCCAGCCATGGATGGACTTGCTGGAGAGCAAGGGATGTAAATTTGTTGGGAGGAGAAAACTCACAGACGTAATTGTAGATGATGATACAAACTGTCTATCGGACATTCTTTGTGGCAGAGAAAGATATGAGGCCGATGCAGTTGTATTTGCTGTTGAAATTTCTGTACTCCAAGAACTCATTCGTAATTCGTATGGTTCCATCTCCCCTTAA

mRNA sequence

ATGATTCTAATTGGGTCTACGACGTTGGGAATTGGAAGTTCCATTTCCTACAAATGTCACTTCTCGAACAGTCTGCGACGTGGGTTTTACAGTAAAGCTCATTCTAAACACCTATGTGTTAATGGAGGAGAGGATGGAAAGAAGAAAAGGGTCGTCGTCGTTGGCTCCGGTTGGGCTGGCCTTGCCGCTGCTAATCACCTCTGCAATCAGGGATTTGATACCACTGTTCTTGAACCAAGCAATAATTTTGGTGGTGCTGATATTCATGGAATTCGTGGTTACTGGCGTCCCTATAAGAATATATTTGGCCTCGTTGATGAGCTTGGTATCGCTCCTTTCACAAACTGGACAGCACCTGCTCATTATTCAGTTGACGGGTTGGAGAATGATTTCAATCTAGTTTGGTGCCGTGGAACTGTTAAAGAAAGGATTTTCCAGCCATGGATGGACTTGCTGGAGAGCAAGGGATGTAAATTTGTTGGGAGGAGAAAACTCACAGACGTAATTGTAGATGATGATACAAACTGTCTATCGGACATTCTTTGTGGCAGAGAAAGATATGAGGCCGATGCAGTTGTATTTGCTGTTGAAATTTCTGTACTCCAAGAACTCATTCGTAATTCGTATGGTTCCATCTCCCCTTAA

Coding sequence (CDS)

ATGATTCTAATTGGGTCTACGACGTTGGGAATTGGAAGTTCCATTTCCTACAAATGTCACTTCTCGAACAGTCTGCGACGTGGGTTTTACAGTAAAGCTCATTCTAAACACCTATGTGTTAATGGAGGAGAGGATGGAAAGAAGAAAAGGGTCGTCGTCGTTGGCTCCGGTTGGGCTGGCCTTGCCGCTGCTAATCACCTCTGCAATCAGGGATTTGATACCACTGTTCTTGAACCAAGCAATAATTTTGGTGGTGCTGATATTCATGGAATTCGTGGTTACTGGCGTCCCTATAAGAATATATTTGGCCTCGTTGATGAGCTTGGTATCGCTCCTTTCACAAACTGGACAGCACCTGCTCATTATTCAGTTGACGGGTTGGAGAATGATTTCAATCTAGTTTGGTGCCGTGGAACTGTTAAAGAAAGGATTTTCCAGCCATGGATGGACTTGCTGGAGAGCAAGGGATGTAAATTTGTTGGGAGGAGAAAACTCACAGACGTAATTGTAGATGATGATACAAACTGTCTATCGGACATTCTTTGTGGCAGAGAAAGATATGAGGCCGATGCAGTTGTATTTGCTGTTGAAATTTCTGTACTCCAAGAACTCATTCGTAATTCGTATGGTTCCATCTCCCCTTAA

Protein sequence

MILIGSTTLGIGSSISYKCHFSNSLRRGFYSKAHSKHLCVNGGEDGKKKRVVVVGSGWAGLAAANHLCNQGFDTTVLEPSNNFGGADIHGIRGYWRPYKNIFGLVDELGIAPFTNWTAPAHYSVDGLENDFNLVWCRGTVKERIFQPWMDLLESKGCKFVGRRKLTDVIVDDDTNCLSDILCGRERYEADAVVFAVEISVLQELIRNSYGSISP*

Homology

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BLAST of MELO3C020832 vs. TrEMBL
Match: A0A0A0LLQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G271410 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.1e-64
Identity = 124/133 (93.23%), Postives = 125/133 (93.98%), Query Frame = 1


Query: 1   MILIGSTTLGIGSSISYKCHFSNSLRRGFYSKAHSKHLCVNGGEDGKKKRVVVVGSGWAG 60
           MILIGST LGIGSSISYK HFSNSLR GFY KA+SKHLC NGGEDGKKKRVVVVGSGWAG
Sbjct: 1   MILIGST-LGIGSSISYKPHFSNSLRTGFYIKAYSKHLCFNGGEDGKKKRVVVVGSGWAG 60

Query: 61  LAAANHLCNQGFDTTVLEPSNNFGGADIHGIRGYWRPYKNIFGLVDELGIAPFTNWTAPA 120
           LAAANHLCNQGFDTTVLEPSNNFGGADIHGIRGYWRPYKNIFGLVDELGIAPFTNWTAPA
Sbjct: 61  LAAANHLCNQGFDTTVLEPSNNFGGADIHGIRGYWRPYKNIFGLVDELGIAPFTNWTAPA 120

Query: 121 HYSVDGLENDFNL 134
           HYSVDGLE  F L
Sbjct: 121 HYSVDGLEVKFPL 132

[Close]

BLAST of MELO3C020832 vs. TrEMBL
Match: A0A0A0LLQ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G271410 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.8e-35
Identity = 78/117 (66.67%), Postives = 93/117 (79.49%), Query Frame = 1


Query: 98  YKNIFGLVDELGI-APFTNWTAPA-----HYSVDGLENDFNLVWCRGTVKERIFQPWMDL 157
           Y +I   + ++G+ AP    +A A     +Y++   +NDFNLVWCRGT KE IFQPW+DL
Sbjct: 201 YSSILNPLLQVGLYAPAEQCSAAATLGILYYTILAHQNDFNLVWCRGTAKEMIFQPWIDL 260

Query: 158 LESKGCKFVGRRKLTDVIVDDDTNCLSDILCGRERYEADAVVFAVEISVLQELIRNS 209
           LESKGC+FVG RK+TDV VDD+TNCLSDILCGRERYEADA+VFAV ISVLQELIRNS
Sbjct: 261 LESKGCRFVGSRKITDVTVDDETNCLSDILCGRERYEADAIVFAVGISVLQELIRNS 317

HSP 2 Score: 170.6 bits (431), Expect = 2.0e-39
Identity = 82/165 (49.70%), Postives = 113/165 (68.48%), Query Frame = 1


Query: 45  DGKKKRVVVVGSGWAGLAAANHLCNQGFDTTVLEPSNNFGGADIHGIRGYWRPYKNIFGL 104
           D ++K+V V G+GWAGLAAA+HL  QG++ T+L   +  G  +  G+RG+W PY+NIF L
Sbjct: 42  DTQRKKVAVAGAGWAGLAAAHHLVKQGYEVTLLGAES--GPTEEIGLRGFWYPYRNIFSL 101

Query: 105 VDELGIAPFTNWTAPAHYSVDGLENDFNLVWCRGTVKERIFQPWMDLLESKGCKFVGRRK 164
           VDELGI+PFT WT  A+YS  GL  + + + CRG V++ IF PW+  LE +G KF G R 
Sbjct: 102 VDELGISPFTGWTKAAYYSSQGLAENSDFLLCRGEVEDIIFSPWLKSLELQGLKFHGNRV 161

Query: 165 LTDVIVDDDTNCLSDILCGRERYEADAVVFAVEISVLQELIRNSY 210
            T + ++ DT C+S I+CG E +EADA V A  +S LQ +I+N Y
Sbjct: 162 PTSLAINKDTACISGIVCGEEVHEADAFVLANGLSSLQYIIKNRY 204

[Close]

BLAST of MELO3C020832 vs. TrEMBL
Match: M5VLW0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003998mg PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 7.3e-29
Identity = 68/114 (59.65%), Postives = 82/114 (71.93%), Query Frame = 1


Query: 21  FSNSLRRGFYSKAHSK--HLCVNGGEDG-KKKRVVVVGSGWAGLAAANHLCNQGFDTTVL 80
           FS+  R GF  +A+++  H   NG  +  + K+VVVVGSGWAGL AA+HL NQGFD TVL
Sbjct: 20  FSSRSRSGFRYRAYAEQDHAAANGSSNKKENKKVVVVGSGWAGLGAAHHLSNQGFDVTVL 79

Query: 81  EPSNNFGGADIHGIRGYWRPYKNIFGLVDELGIAPFTNWTAPAHYSVDGLENDF 132
           E  N+ GG +  GIRGYW PY+NIF LVDELGI PFTNWT  A YS +GLE +F
Sbjct: 80  ESGNDLGGLEEVGIRGYWYPYQNIFNLVDELGIKPFTNWTKFAQYSAEGLEVEF 133

[Close]

BLAST of MELO3C020832 vs. TrEMBL
Match: M5VLW0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003998mg PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.5e-21
Identity = 54/118 (45.76%), Postives = 82/118 (69.49%), Query Frame = 1


Query: 96  RPYKNIFGLVDELGI-APFTNWTAPAHYSVDGL----ENDFNLVWCRGTVKERIFQPWMD 155
           R Y+N+   + ++G+ AP    +A A   +       + DF+LVWCRGT +ERIF+PW++
Sbjct: 202 RLYQNVLSPLLQVGLFAPAEQCSAAATLGLLSYILAHQKDFDLVWCRGTSRERIFKPWVE 261

Query: 156 LLESKGCKFVGRRKLTDVIVDDDTNCLSDILCGRERYEADAVVFAVEISVLQELIRNS 209
            L +KGCKF  R ++TD +++++T C+S+++CG+E Y ADAVV AV IS LQ+LI NS
Sbjct: 262 SLTAKGCKFEKRIRVTDFLINEETGCVSEVICGKEIYNADAVVLAVGISTLQKLIENS 319

HSP 2 Score: 133.7 bits (335), Expect = 2.8e-28
Identity = 65/111 (58.56%), Postives = 80/111 (72.07%), Query Frame = 1


Query: 26  RRGFYSKAHSKHLCVNGGEDG-----KKKRVVVVGSGWAGLAAANHLCNQGFDTTVLEPS 85
           R GF+++A S     NGG++      KKK+VVVVGSGWAGL AANHLCNQGFD TVL+  
Sbjct: 21  RVGFFARADSVEAHANGGDNSIKNNDKKKKVVVVGSGWAGLGAANHLCNQGFDVTVLDGG 80

Query: 86  NNFGGADIHGIRGYWRPYKNIFGLVDELGIAPFTNWTAPAHYSVDGLENDF 132
           +  G  D  GI+G+W PY+NIF LV+ELGI PFT+WT  A YS +GLE +F
Sbjct: 81  DGLGNPDNVGIQGFWYPYQNIFSLVNELGIKPFTSWTRSAMYSGEGLEVEF 131

[Close]

BLAST of MELO3C020832 vs. TrEMBL
Match: A0A061DXU5_THECC (Phytoene desaturase 3 OS=Theobroma cacao GN=TCM_006576 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 5.2e-19
Identity = 46/119 (38.66%), Postives = 85/119 (71.43%), Query Frame = 1


Query: 96  RPYKNIFGLVDELGI-APFTNWTAPA-----HYSVDGLENDFNLVWCRGTVKERIFQPWM 155
           R Y+++FG + ++G+ AP    +A A     +Y +   +  F++V+CRGT +E+IF+PW+
Sbjct: 200 RLYQDVFGPLLQVGLFAPAELCSAAATLGLLYYLILAHQKHFDVVFCRGTTREKIFEPWV 259

Query: 156 DLLESKGCKFVGRRKLTDVIVDDDTNCLSDILCGRERYEADAVVFAVEISVLQELIRNS 209
           + L++KGC+ +  +K+TD+  +++T C+++++CG+E Y ADAV+ AV I+ LQE+I+ S
Sbjct: 260 ESLKAKGCEMLEDKKVTDIFFNEETGCITEVVCGKETYSADAVILAVGIATLQEIIKKS 318

HSP 2 Score: 131.3 bits (329), Expect = 1.4e-27
Identity = 64/92 (69.57%), Postives = 70/92 (76.09%), Query Frame = 1


Query: 41  NGGED-GKKKRVVVVGSGWAGLAAANHLCNQGFDTTVLEPSNNFGGADIHGIRGYWRPYK 100
           NGGE   ++K+VVVVGSGWAGL AA+HLCNQ FD TVLE  N FGG +  G RGYW PYK
Sbjct: 43  NGGESIERRKKVVVVGSGWAGLGAAHHLCNQEFDVTVLEGDNGFGGVEDVGNRGYWYPYK 102

Query: 101 NIFGLVDELGIAPFTNWTAPAHYSVDGLENDF 132
           NIF LVDELGI PFTNWT  A YS  GLE +F
Sbjct: 103 NIFSLVDELGIKPFTNWTKSAQYSEYGLEVEF 134

[Close]

BLAST of MELO3C020832 vs. NCBI nr
Match: gi|659115767|ref|XP_008457726.1| (PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 274.6 bits (701), Expect = 1.4e-70
Identity = 130/133 (97.74%), Postives = 130/133 (97.74%), Query Frame = 1


Query: 1   MILIGSTTLGIGSSISYKCHFSNSLRRGFYSKAHSKHLCVNGGEDGKKKRVVVVGSGWAG 60
           MILIGSTTLGIGSSISYKCHFSNSLRRGFYSKAHSKHLCVNGGEDGKKKRVVVVGSGWAG
Sbjct: 1   MILIGSTTLGIGSSISYKCHFSNSLRRGFYSKAHSKHLCVNGGEDGKKKRVVVVGSGWAG 60

Query: 61  LAAANHLCNQGFDTTVLEPSNNFGGADIHGIRGYWRPYKNIFGLVDELGIAPFTNWTAPA 120
           LAAANHLCNQGFDTTVLEPSNNFGGADIHGIRGYWRPYKNIFGLVDELGIAPFTNWTAPA
Sbjct: 61  LAAANHLCNQGFDTTVLEPSNNFGGADIHGIRGYWRPYKNIFGLVDELGIAPFTNWTAPA 120

Query: 121 HYSVDGLENDFNL 134
           HYSVDGLE  F L
Sbjct: 121 HYSVDGLEVKFPL 133

[Close]

BLAST of MELO3C020832 vs. NCBI nr
Match: gi|659115767|ref|XP_008457726.1| (PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-39
Identity = 88/117 (75.21%), Postives = 98/117 (83.76%), Query Frame = 1


Query: 98  YKNIFGLVDELGI-APFTNWTAPA-----HYSVDGLENDFNLVWCRGTVKERIFQPWMDL 157
           Y +I   + ++G+ AP    +A A     +Y++   +NDFNLVWCRGTVKERIFQPWMDL
Sbjct: 202 YSSILNPLLQVGLYAPAEQCSAAATLGILYYTILAHQNDFNLVWCRGTVKERIFQPWMDL 261

Query: 158 LESKGCKFVGRRKLTDVIVDDDTNCLSDILCGRERYEADAVVFAVEISVLQELIRNS 209
           LESKGCKFVGRRKLTDVIVDDDTNCLSDILCGRERYEADAVVFAVEISVLQELIRNS
Sbjct: 262 LESKGCKFVGRRKLTDVIVDDDTNCLSDILCGRERYEADAVVFAVEISVLQELIRNS 318

HSP 2 Score: 254.6 bits (649), Expect = 1.5e-64
Identity = 124/133 (93.23%), Postives = 125/133 (93.98%), Query Frame = 1


Query: 1   MILIGSTTLGIGSSISYKCHFSNSLRRGFYSKAHSKHLCVNGGEDGKKKRVVVVGSGWAG 60
           MILIGST LGIGSSISYK HFSNSLR GFY KA+SKHLC NGGEDGKKKRVVVVGSGWAG
Sbjct: 1   MILIGST-LGIGSSISYKPHFSNSLRTGFYIKAYSKHLCFNGGEDGKKKRVVVVGSGWAG 60

Query: 61  LAAANHLCNQGFDTTVLEPSNNFGGADIHGIRGYWRPYKNIFGLVDELGIAPFTNWTAPA 120
           LAAANHLCNQGFDTTVLEPSNNFGGADIHGIRGYWRPYKNIFGLVDELGIAPFTNWTAPA
Sbjct: 61  LAAANHLCNQGFDTTVLEPSNNFGGADIHGIRGYWRPYKNIFGLVDELGIAPFTNWTAPA 120

Query: 121 HYSVDGLENDFNL 134
           HYSVDGLE  F L
Sbjct: 121 HYSVDGLEVKFPL 132

[Close]

BLAST of MELO3C020832 vs. NCBI nr
Match: gi|449458684|ref|XP_004147077.1| (PREDICTED: zeta-carotene desaturase, chloroplastic/chromoplastic-like [Cucumis sativus])

HSP 1 Score: 155.6 bits (392), Expect = 9.7e-35
Identity = 78/117 (66.67%), Postives = 93/117 (79.49%), Query Frame = 1


Query: 98  YKNIFGLVDELGI-APFTNWTAPA-----HYSVDGLENDFNLVWCRGTVKERIFQPWMDL 157
           Y +I   + ++G+ AP    +A A     +Y++   +NDFNLVWCRGT KE IFQPW+DL
Sbjct: 201 YSSILNPLLQVGLYAPAEQCSAAATLGILYYTILAHQNDFNLVWCRGTAKEMIFQPWIDL 260

Query: 158 LESKGCKFVGRRKLTDVIVDDDTNCLSDILCGRERYEADAVVFAVEISVLQELIRNS 209
           LESKGC+FVG RK+TDV VDD+TNCLSDILCGRERYEADA+VFAV ISVLQELIRNS
Sbjct: 261 LESKGCRFVGSRKITDVTVDDETNCLSDILCGRERYEADAIVFAVGISVLQELIRNS 317

HSP 2 Score: 181.0 bits (458), Expect = 2.2e-42
Identity = 85/177 (48.02%), Postives = 122/177 (68.93%), Query Frame = 1


Query: 48  KKRVVVVGSGWAGLAAANHLCNQGFDTTVLEPSNNFGGADIHGIRGYWRPYKNIFGLVDE 107
           +K+VVVVG+GWAGLA+A+HL  QGFD T+LE  +  G A+  G+RG+W PY+NIF L DE
Sbjct: 40  RKKVVVVGAGWAGLASAHHLSKQGFDVTLLEAGS--GPAEEVGVRGFWYPYRNIFSLADE 99

Query: 108 LGIAPFTNWTAPAHYSVDGLEN----------------DFNLVWCRGTVKERIFQPWMDL 167
           LGI PFT WT  A+YS +G+E+                +F++VWCRG V+E+IF PW++ 
Sbjct: 100 LGIQPFTKWTRSAYYSPEGMESLTLTTLMLPGENMIQQNFDVVWCRGKVEEKIFLPWLES 159

Query: 168 LESKGCKFVGRRKLTDVIVDDDTNCLSDILCGRERYEADAVVFAVEISVLQELIRNS 209
           ++  G KF   + +TD +V++DT C+S ++CG+E YEADA + AV +S LQ  + +S
Sbjct: 160 MKVNGLKFHDNKMVTDFMVNEDTGCISGVVCGQEIYEADAFILAVGVSTLQSTVISS 214

[Close]

BLAST of MELO3C020832 vs. NCBI nr
Match: gi|659115771|ref|XP_008457728.1| (PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic-like isoform X3 [Cucumis melo])

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-39
Identity = 88/117 (75.21%), Postives = 98/117 (83.76%), Query Frame = 1


Query: 98  YKNIFGLVDELGI-APFTNWTAPA-----HYSVDGLENDFNLVWCRGTVKERIFQPWMDL 157
           Y +I   + ++G+ AP    +A A     +Y++   +NDFNLVWCRGTVKERIFQPWMDL
Sbjct: 99  YSSILNPLLQVGLYAPAEQCSAAATLGILYYTILAHQNDFNLVWCRGTVKERIFQPWMDL 158

Query: 158 LESKGCKFVGRRKLTDVIVDDDTNCLSDILCGRERYEADAVVFAVEISVLQELIRNS 209
           LESKGCKFVGRRKLTDVIVDDDTNCLSDILCGRERYEADAVVFAVEISVLQELIRNS
Sbjct: 159 LESKGCKFVGRRKLTDVIVDDDTNCLSDILCGRERYEADAVVFAVEISVLQELIRNS 215

[Close]

BLAST of MELO3C020832 vs. NCBI nr
Match: gi|659115769|ref|XP_008457727.1| (PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic-like isoform X2 [Cucumis melo])

HSP 1 Score: 171.8 bits (434), Expect = 1.3e-39
Identity = 88/117 (75.21%), Postives = 98/117 (83.76%), Query Frame = 1


Query: 98  YKNIFGLVDELGI-APFTNWTAPA-----HYSVDGLENDFNLVWCRGTVKERIFQPWMDL 157
           Y +I   + ++G+ AP    +A A     +Y++   +NDFNLVWCRGTVKERIFQPWMDL
Sbjct: 147 YSSILNPLLQVGLYAPAEQCSAAATLGILYYTILAHQNDFNLVWCRGTVKERIFQPWMDL 206

Query: 158 LESKGCKFVGRRKLTDVIVDDDTNCLSDILCGRERYEADAVVFAVEISVLQELIRNS 209
           LESKGCKFVGRRKLTDVIVDDDTNCLSDILCGRERYEADAVVFAVEISVLQELIRNS
Sbjct: 207 LESKGCKFVGRRKLTDVIVDDDTNCLSDILCGRERYEADAVVFAVEISVLQELIRNS 263

The following BLAST results are available for this feature:

BLAST of MELO3C020832 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLQ3_CUCSA	1.1e-64	93.23	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G271410 PE=4 SV=1	[more]
A0A0A0LLQ3_CUCSA	6.8e-35	66.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G271410 PE=4 SV=1	[more]
M5VLW0_PRUPE	7.3e-29	59.65	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003998mg PE=4 SV=1	[more]
M5VLW0_PRUPE	2.5e-21	45.76	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003998mg PE=4 SV=1	[more]
A0A061DXU5_THECC	5.2e-19	38.66	Phytoene desaturase 3 OS=Theobroma cacao GN=TCM_006576 PE=4 SV=1	[more]

BLAST of MELO3C020832 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659115767\|ref\|XP_008457726.1\|	1.4e-70	97.74	PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic-like isoform X1 [...	[more]
gi\|659115767\|ref\|XP_008457726.1\|	1.3e-39	75.21	PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic-like isoform X1 [...	[more]
gi\|449458684\|ref\|XP_004147077.1\|	9.7e-35	66.67	PREDICTED: zeta-carotene desaturase, chloroplastic/chromoplastic-like [Cucumis s...	[more]
gi\|659115771\|ref\|XP_008457728.1\|	1.3e-39	75.21	PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic-like isoform X3 [...	[more]
gi\|659115769\|ref\|XP_008457727.1\|	1.3e-39	75.21	PREDICTED: phytoene dehydrogenase, chloroplastic/chromoplastic-like isoform X2 [...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR023753	FAD/NAD-binding_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0016491	oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0009536	plastid
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016491	oxidoreductase activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU65154	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C020832T1	MELO3C020832T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU65154	MU65154	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023753	FAD/NAD(P)-binding domain	GENE3D	G3DSA:3.50.50.60		coord: 47..205 score: 1.8
IPR023753	FAD/NAD(P)-binding domain	unknown	SSF51905	FAD/NAD(P)-binding domain	coord: 49..207 score: 4.66
None	No IPR available	PANTHER	PTHR10742	AMINE OXIDASE	coord: 44..208 score: 7.5
None	No IPR available	PANTHER	PTHR10742:SF290	SUBFAMILY NOT NAMED	coord: 44..208 score: 7.5
None	No IPR available	PFAM	PF13450	NAD_binding_8	coord: 53..85 score: 4.

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C020832	Cp4.1LG16g03360	Cucurbita pepo (Zucchini)	cpemeB258
MELO3C020832	Carg16159	Silver-seed gourd	carmeB0349

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C020832	Watermelon (Charleston Gray)	mewcgB106
MELO3C020832	Watermelon (97103) v1	mewmB120
MELO3C020832	Cucurbita pepo (Zucchini)	cpemeB658
MELO3C020832	Bottle gourd (USVL1VR-Ls)	lsimeB054
MELO3C020832	Cucumber (Gy14) v2	cgybmeB084
MELO3C020832	Silver-seed gourd	carmeB0800
MELO3C020832	Cucumber (Chinese Long) v3	cucmeB102
MELO3C020832	Watermelon (97103) v2	mewmbB108
MELO3C020832	Wax gourd	mewgoB115
MELO3C020832	Wax gourd	mewgoB135
MELO3C020832	Cucumber (Gy14) v1	cgymeB393
MELO3C020832	Cucurbita maxima (Rimu)	cmameB490
MELO3C020832	Cucurbita maxima (Rimu)	cmameB551
MELO3C020832	Cucurbita moschata (Rifu)	cmomeB484
MELO3C020832	Cucurbita moschata (Rifu)	cmomeB541
MELO3C020832	Wild cucumber (PI 183967)	cpimeB097
MELO3C020832	Cucumber (Chinese Long) v2	cumeB098