MELO3C020492.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACACATCCTTTTTAACTCCATCATTATTTCCCAACGAAACTTATTTTGAACTAATAACCACCCCTTCGGCAGCCGTTCGTCGCAATTACGAAACTGGCAAACCCGGAGTGGTCACCGGAGCAAAGGGAAAGCGTTGGGAGAGTGAGAGCCCTTTATGAGGCGTTGGGTACCAAAGACGTGGAGACTGTGCACCGCCTCCTGGCGCCGGATCTGGAGTGGTGGTTCCATGGTCCCCCCTCGCACCAGTACCTGATGCGCCTCCTCACCGGCGCCTCCTCCTCCTTCGTTTTCGCACCCATCTCCCTCGTCCCACTTGGGCCCACCATCGTTCTGGCGGAAGGCTTCCACCCAAAACGCGCCGTTTCGTGGGTTCACGCATGGACCATTACCGATGGAGTCATTACCCACGTGAAAGAATATCTTAATACTTCTGTTACTGTCAAGCGCTTCTCCTCCGCAGCCACCGACGGGGATTCGCCGTCCATATCGCCGCCGCCTAACTGCGAGAGTTTGTGGCAGAGCAAGGTGTGGAGAGAATCCATGCCTGCTCTTGTTTTGGCTCTTTAAAATTATTAATTAATAGTATAATACATATATACACACATATACATACATATATATGGTGTGTGTTTCTTCTGAACAAATAAATTTTCCTGCTTGTGTACTACCCACTTTTGGTTTGT AACACATCCTTTTTAACTCCATCATTATTTCCCAACGAAACTTATTTTGAACTAATAACCACCCCTTCGGCAGCCGTTCGTCGCAATTACGAAACTGGCAAACCCGGAGTGGTCACCGGAGCAAAGGGAAAGCGTTGGGAGAGTGAGAGCCCTTTATGAGGCGTTGGGTACCAAAGACGTGGAGACTGTGCACCGCCTCCTGGCGCCGGATCTGGAGTGGTGGTTCCATGGTCCCCCCTCGCACCAGTACCTGATGCGCCTCCTCACCGGCGCCTCCTCCTCCTTCGTTTTCGCACCCATCTCCCTCGTCCCACTTGGGCCCACCATCGTTCTGGCGGAAGGCTTCCACCCAAAACGCGCCGTTTCGTGGGTTCACGCATGGACCATTACCGATGGAGTCATTACCCACGTGAAAGAATATCTTAATACTTCTGTTACTGTCAAGCGCTTCTCCTCCGCAGCCACCGACGGGGATTCGCCGTCCATATCGCCGCCGCCTAACTGCGAGAGTTTGTGGCAGAGCAAGGTGTGGAGAGAATCCATGCCTGCTCTTGTTTTGGCTCTTTAAAATTATTAATTAATAGTATAATACATATATACACACATATACATACATATATATGGTGTGTGTTTCTTCTGAACAAATAAATTTTCCTGCTTGTGTACTACCCACTTTTGGTTTGT ATGCGCCTCCTCACCGGCGCCTCCTCCTCCTTCGTTTTCGCACCCATCTCCCTCGTCCCACTTGGGCCCACCATCGTTCTGGCGGAAGGCTTCCACCCAAAACGCGCCGTTTCGTGGGTTCACGCATGGACCATTACCGATGGAGTCATTACCCACGTGAAAGAATATCTTAATACTTCTGTTACTGTCAAGCGCTTCTCCTCCGCAGCCACCGACGGGGATTCGCCGTCCATATCGCCGCCGCCTAACTGCGAGAGTTTGTGGCAGAGCAAGGTGTGGAGAGAATCCATGCCTGCTCTTGTTTTGGCTCTTTAA MRLLTGASSSFVFAPISLVPLGPTIVLAEGFHPKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFSSAATDGDSPSISPPPNCESLWQSKVWRESMPALVLAL
BLAST of MELO3C020492.2 vs. NCBI nr
Match: XP_023523043.1 (senescence associated gene 20-like [Cucurbita pepo subsp. pepo] >XP_023524551.1 senescence associated gene 20-like [Cucurbita pepo subsp. pepo] >XP_023524552.1 senescence associated gene 20-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 147.9 bits (372), Expect = 1.9e-32 Identity = 83/114 (72.81%), Postives = 92/114 (80.70%), Query Frame = 0
BLAST of MELO3C020492.2 vs. NCBI nr
Match: XP_022949246.1 (senescence associated gene 20-like [Cucurbita moschata]) HSP 1 Score: 146.4 bits (368), Expect = 5.6e-32 Identity = 82/114 (71.93%), Postives = 91/114 (79.82%), Query Frame = 0
BLAST of MELO3C020492.2 vs. NCBI nr
Match: XP_022998178.1 (senescence associated gene 20-like [Cucurbita maxima]) HSP 1 Score: 146.0 bits (367), Expect = 7.3e-32 Identity = 82/114 (71.93%), Postives = 91/114 (79.82%), Query Frame = 0
BLAST of MELO3C020492.2 vs. NCBI nr
Match: XP_022154901.1 (senescence associated gene 20 [Momordica charantia]) HSP 1 Score: 137.9 bits (346), Expect = 2.0e-29 Identity = 73/108 (67.59%), Postives = 85/108 (78.70%), Query Frame = 0
BLAST of MELO3C020492.2 vs. NCBI nr
Match: PNS91728.1 (hypothetical protein POPTR_019G125900v3 [Populus trichocarpa]) HSP 1 Score: 108.2 bits (269), Expect = 1.7e-20 Identity = 57/103 (55.34%), Postives = 71/103 (68.93%), Query Frame = 0
BLAST of MELO3C020492.2 vs. TAIR10
Match: AT3G10985.1 (senescence associated gene 20) HSP 1 Score: 95.1 bits (235), Expect = 2.7e-20 Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = 0
BLAST of MELO3C020492.2 vs. TAIR10
Match: AT5G01740.1 (Nuclear transport factor 2 (NTF2) family protein) HSP 1 Score: 61.6 bits (148), Expect = 3.3e-10 Identity = 44/112 (39.29%), Postives = 62/112 (55.36%), Query Frame = 0
BLAST of MELO3C020492.2 vs. Swiss-Prot
Match: sp|Q94AK6|SAG20_ARATH (Senescence associated gene 20 OS=Arabidopsis thaliana OX=3702 GN=SAG20 PE=2 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 4.8e-19 Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = 0
BLAST of MELO3C020492.2 vs. Swiss-Prot
Match: sp|P20144|WUN1_SOLTU (Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 3.2e-15 Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = 0
BLAST of MELO3C020492.2 vs. TrEMBL
Match: tr|A0A2K1WT77|A0A2K1WT77_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_019G125900v3 PE=4 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 1.1e-20 Identity = 57/103 (55.34%), Postives = 71/103 (68.93%), Query Frame = 0
BLAST of MELO3C020492.2 vs. TrEMBL
Match: tr|A0A061GYQ0|A0A061GYQ0_THECC (Senescence associated gene 20, putative OS=Theobroma cacao OX=3641 GN=TCM_042245 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.4e-20 Identity = 55/109 (50.46%), Postives = 80/109 (73.39%), Query Frame = 0
BLAST of MELO3C020492.2 vs. TrEMBL
Match: tr|A0A1R3K5H8|A0A1R3K5H8_9ROSI (Wound-induced protein, Wun1 OS=Corchorus olitorius OX=93759 GN=COLO4_11170 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.7e-19 Identity = 53/105 (50.48%), Postives = 77/105 (73.33%), Query Frame = 0
BLAST of MELO3C020492.2 vs. TrEMBL
Match: tr|A0A2N9EI45|A0A2N9EI45_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2202 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 4.7e-19 Identity = 61/117 (52.14%), Postives = 76/117 (64.96%), Query Frame = 0
BLAST of MELO3C020492.2 vs. TrEMBL
Match: tr|A0A059A8H8|A0A059A8H8_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_J00155 PE=4 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 4.7e-19 Identity = 55/110 (50.00%), Postives = 76/110 (69.09%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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