Carg07031 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg07031
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Wound-induced protein 1
Location	Cucurbita_argyrosperma_scaffold_065 : 1023940 .. 1025478 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCCAATATGGGGTATACGACGATTCACCAAAATCATGTCTACACCCACCAACGCTAAAATGTCTCAAAATGTACTATGGGCAAATGCGACTAATCATCCATTCTTCATACCTCAAGTTACATGATATTTAACCTGTTGTGTTTTCTTTACTTACAGCCATATAACGTTGTTTTCTATAATTCTTTCAAATATATTTCATCGCTCACACTTTTTTAAAACACATCTCGCAAACATGACTCGAGATTTGAGTATATGCTGACGTTGTCCGTGAAGTTCGAACTTCTCACAACTGACTTGTTCTCTAAATTATAATAAGTGCCGAGCAATCGTTATCGTGCTGCTAATATAATATTAATTAAAAAATTATATAAAAAAAATTCCGAGCAAAAATATAATTTCTAAAATTCAAATTTTAATATTACAATATAATTTTACCATTAAAAAAATAATTAAAGTTTCTGTCGAAATATAATATTTAGAGTATATATTATTTATGAAATATACGTTAGATATTATATCTTAATATTTTTCCTTTATAATTTGATTTATAATATATTTTATTTTATTCTCAATATTTAATTAATTTTTATTTTAGTTGTTTGATAGGAATTAGTTGTTGGCTTCTGTCCTATTAAAGGGTATGAATATGAATGAGAATACACACTTTTGATTTCAATTCTATTTCTATTTCTCATTCTTAACCGTCTCAAATGGACAAAGAAATATAGTCACCAAATTTGAAATATAATAATAATAATAATAAACACCATGAACTTGGAAACAATATATATATATATTATTTTTGTTTTATTATTGTCAAATTGACAAATTTCCTTGTCGTGTAGCGAAACTCTTGGCTATAAATGCTTTGGATTCAATCTTTAGAGCATAGAATCCTCTCGAACACATGCACTCCAACTCGTTATAAAAAGTTTAAAACTTTAATTCACTCCCACACTCGTTTTTCCGGCGACCATTATTCAACCGGCCTCCGGCAGCACTCGTCGGAAACACGAAACTGGCAAACTCAGAGTCGCCGTCGGAGCAGAACGAGATCAGCGTTGCGATAGTGACGGCACTTTACGAGGCGTTGAGTTCCAAAGACGTGGAGACGGTGCACCGCCTTCTGGCGCCGGACTTGGAGTGGTGGTTCCATGGTCCACCGTCGCACCAATACTTGATGCGTCTTCTCACCGGCGTCTCCTCCTCTTCCTTCGTCTTTGCACCCATCTCCATCGTCGCATTTGGGCCCACCGTCCTCGCTGAAGGCTATGACACGAAACGCGCCGTTTCGTGGGTCCATGCCTGGACCATTACTGATGGGGTTATAACGCATGTCAAGGAGTATCTCAACACTTCTGTTACTGTCAAGCGTTTCGCCACCGCCGCTGATGAGGAGTCGCCGTCGTCATCTCCGCCGTATGCGGAGGCGGATACCCTGACGACAACTAACTGTCAGAGTGTGTGGCAGAGCAAGGTGTGCGGCGAGTCGGTCCCTGGTCTTGTTTTGGCACTTCAGATGCATATGTTGTGA

mRNA sequence

ATGGTGCCAATATGGGCACTCGTCGGAAACACGAAACTGGCAAACTCAGAGTCGCCGTCGGAGCAGAACGAGATCAGCGTTGCGATAGTGACGGCACTTTACGAGGCGTTGAGTTCCAAAGACGTGGAGACGGTGCACCGCCTTCTGGCGCCGGACTTGGAGTGGTGGTTCCATGGTCCACCGTCGCACCAATACTTGATGCGTCTTCTCACCGGCGTCTCCTCCTCTTCCTTCGTCTTTGCACCCATCTCCATCGTCGCATTTGGGCCCACCGTCCTCGCTGAAGGCTATGACACGAAACGCGCCGTTTCGTGGGTCCATGCCTGGACCATTACTGATGGGGTTATAACGCATGTCAAGGAGTATCTCAACACTTCTGTTACTGTCAAGCGTTTCGCCACCGCCGCTGATGAGGAGTCGCCGTCGTCATCTCCGCCGTATGCGGAGGCGGATACCCTGACGACAACTAACTGTCAGAGTGTGTGGCAGAGCAAGGTGTGCGGCGAGTCGGTCCCTGGTCTTGTTTTGGCACTTCAGATGCATATGTTGTGA

Coding sequence (CDS)

ATGGTGCCAATATGGGCACTCGTCGGAAACACGAAACTGGCAAACTCAGAGTCGCCGTCGGAGCAGAACGAGATCAGCGTTGCGATAGTGACGGCACTTTACGAGGCGTTGAGTTCCAAAGACGTGGAGACGGTGCACCGCCTTCTGGCGCCGGACTTGGAGTGGTGGTTCCATGGTCCACCGTCGCACCAATACTTGATGCGTCTTCTCACCGGCGTCTCCTCCTCTTCCTTCGTCTTTGCACCCATCTCCATCGTCGCATTTGGGCCCACCGTCCTCGCTGAAGGCTATGACACGAAACGCGCCGTTTCGTGGGTCCATGCCTGGACCATTACTGATGGGGTTATAACGCATGTCAAGGAGTATCTCAACACTTCTGTTACTGTCAAGCGTTTCGCCACCGCCGCTGATGAGGAGTCGCCGTCGTCATCTCCGCCGTATGCGGAGGCGGATACCCTGACGACAACTAACTGTCAGAGTGTGTGGCAGAGCAAGGTGTGCGGCGAGTCGGTCCCTGGTCTTGTTTTGGCACTTCAGATGCATATGTTGTGA

Protein sequence

MVPIWALVGNTKLANSESPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLTGVSSSSFVFAPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVCGESVPGLVLALQMHML

Homology

[Close]

BLAST of Carg07031 vs. NCBI nr
Match: XP_023523043.1 (senescence associated gene 20-like [Cucurbita pepo subsp. pepo] >XP_023524551.1 senescence associated gene 20-like [Cucurbita pepo subsp. pepo] >XP_023524552.1 senescence associated gene 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 230.3 bits (586), Expect = 5.1e-57
Identity = 116/117 (99.15%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 67  MRLLTGVSSSSFVFAPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTS 126
           MRLLTGVSSSSFVFAPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTS
Sbjct: 1   MRLLTGVSSSSFVFAPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTS 60

Query: 127 VTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVCGESVPGLVLALQMHML 184
           VTVKRFATAADEESPSSSPPYAEADTL TTNCQSVWQSKVCGESVPGLVLALQMHML
Sbjct: 61  VTVKRFATAADEESPSSSPPYAEADTLMTTNCQSVWQSKVCGESVPGLVLALQMHML 117

[Close]

BLAST of Carg07031 vs. NCBI nr
Match: XP_022949246.1 (senescence associated gene 20-like [Cucurbita moschata])

HSP 1 Score: 229.6 bits (584), Expect = 8.8e-57
Identity = 115/117 (98.29%), Postives = 116/117 (99.15%), Query Frame = 0


Query: 67  MRLLTGVSSSSFVFAPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTS 126
           MRLLTGVSSSSFVF PISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTS
Sbjct: 1   MRLLTGVSSSSFVFVPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTS 60

Query: 127 VTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVCGESVPGLVLALQMHML 184
           VTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVCGESVPGLVLALQMH+L
Sbjct: 61  VTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVCGESVPGLVLALQMHIL 117

[Close]

BLAST of Carg07031 vs. NCBI nr
Match: XP_022998178.1 (senescence associated gene 20-like [Cucurbita maxima])

HSP 1 Score: 225.3 bits (573), Expect = 1.7e-55
Identity = 113/117 (96.58%), Postives = 114/117 (97.44%), Query Frame = 0


Query: 67  MRLLTGVSSSSFVFAPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTS 126
           MRLLTGVSSSSFVF PISIVAFGPTVLAEGY+TKRAVSWVHAWTITDGVITHVKEYLNTS
Sbjct: 1   MRLLTGVSSSSFVFTPISIVAFGPTVLAEGYNTKRAVSWVHAWTITDGVITHVKEYLNTS 60

Query: 127 VTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVCGESVPGLVLALQMHML 184
           VTVKRF TAADEESPSSSPPYAEADTL TTNCQSVWQSKVCGESVPGLVLALQMHML
Sbjct: 61  VTVKRFVTAADEESPSSSPPYAEADTLMTTNCQSVWQSKVCGESVPGLVLALQMHML 117

[Close]

BLAST of Carg07031 vs. NCBI nr
Match: POE66369.1 (wound-induced protein 1 [Quercus suber])

HSP 1 Score: 198.7 bits (504), Expect = 1.7e-47
Identity = 102/171 (59.65%), Postives = 125/171 (73.10%), Query Frame = 0


Query: 12  KLANSESPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLT 71
           +LAN ++  E+ E +  +V  LY+ALSSKD + V RLLAPDLEWWFHGPP+HQ+LM LLT
Sbjct: 131 ELANPQASLEEEEANERLVGTLYKALSSKDFDEVQRLLAPDLEWWFHGPPNHQHLMHLLT 190

Query: 72  G---VSSSSFVFAPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVT 131
           G    SSSSFVF P +IVAFG TVL EG++ +R+ SWVHAWT+TDG+IT V+EY NTSVT
Sbjct: 191 GSAPSSSSSFVFVPQTIVAFGSTVLVEGFEKERSASWVHAWTVTDGIITQVREYFNTSVT 250

Query: 132 VKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVCG-ESVPGLVLAL 179
           V RF   A +  P SSP      + +   CQSVW+SK+C   SVPGLVLAL
Sbjct: 251 VTRFGAGASQ--PISSPGVTTLRSASANKCQSVWESKLCDINSVPGLVLAL 299

[Close]

BLAST of Carg07031 vs. NCBI nr
Match: XP_024951499.1 (senescence associated gene 20-like [Citrus sinensis])

HSP 1 Score: 190.3 bits (482), Expect = 5.9e-45
Identity = 99/175 (56.57%), Postives = 124/175 (70.86%), Query Frame = 0


Query: 11  TKLANSE-SPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRL 70
           ++LANS+ S   + E ++ +V  LY+AL+S DV+TVHRLL  DLEWWFHGPP HQ+LM +
Sbjct: 4   SELANSKASVDNEEEYNIRVVKTLYDALNSFDVKTVHRLLTSDLEWWFHGPPGHQHLMHM 63

Query: 71  LTGVSSSS-----FVFAPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLN 130
           LTG SSSS     F F P+S VAFGPTV+ EG+  + +VSWVHAWT+TDG+IT V+EY N
Sbjct: 64  LTGSSSSSEDKRCFTFVPLSTVAFGPTVIVEGHSKEHSVSWVHAWTVTDGIITQVREYFN 123

Query: 131 TSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVC-GESVPGLVLAL 179
           TSVTV RF       SP+       A    +++CQSVWQSK+C   SVPGLVLAL
Sbjct: 124 TSVTVTRFGDPQLLSSPA-------APVTVSSSCQSVWQSKLCDNNSVPGLVLAL 171

[Close]

BLAST of Carg07031 vs. TAIR10
Match: AT3G10985.1 (senescence associated gene 20)

HSP 1 Score: 103.2 bits (256), Expect = 1.7e-22
Identity = 57/119 (47.90%), Postives = 77/119 (64.71%), Query Frame = 0


Query: 67  MRLLTG---VSSSSFVFAPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYL 126
           MR+LTG    SSSSF F P+S+V+FG TV+AEG D   ++SW+HAWT+ +G+IT V+EY 
Sbjct: 1   MRVLTGGVSPSSSSFEFVPLSVVSFGSTVIAEGCDAATSISWIHAWTVANGIITQVREYS 60

Query: 127 NTSVTVKRFA-TAADEESPSSSPPYAEADTLTTTNCQSVWQSKV---CGESVPGLVLAL 179
           NTS+TV R     A   S   +PP         ++C SVW+S+     G+ VPGLVLA+
Sbjct: 61  NTSLTVTRIGNVVAGRRSAEIAPP---------SHCSSVWESQFSGRAGKPVPGLVLAI 110

[Close]

BLAST of Carg07031 vs. TAIR10
Match: AT5G01740.1 (Nuclear transport factor 2 (NTF2) family protein)

HSP 1 Score: 98.2 bits (243), Expect = 5.5e-21
Identity = 53/132 (40.15%), Postives = 80/132 (60.61%), Query Frame = 0


Query: 10  NTKLANSESPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRL 69
           N +++   +P  +N+ ++ +   LY+AL   D  TV +++A D+EWWFHGP   Q++MRL
Sbjct: 5   NVEISTRLTPEMKNQGTIEL---LYKALQQGDTSTVTKVVASDVEWWFHGPHDCQHMMRL 64

Query: 70  LTG--VSSSSFVFAPISIVAFGP---TVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLN 129
           LTG      SF F P S+    P    V+AEG++  R V WVH W + DGV+T ++EY N
Sbjct: 65  LTGEPPRQVSFRFEPSSVQVVVPGHDCVIAEGWEGSR-VYWVHVWKLKDGVVTELREYFN 124

Query: 130 TSVTVKRFATAA 137
           T +TV  ++  A
Sbjct: 125 TWLTVTDYSLGA 132

[Close]

BLAST of Carg07031 vs. Swiss-Prot
Match: sp|Q94AK6|SAG20_ARATH (Senescence associated gene 20 OS=Arabidopsis thaliana OX=3702 GN=SAG20 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.1e-21
Identity = 57/119 (47.90%), Postives = 77/119 (64.71%), Query Frame = 0


Query: 67  MRLLTG---VSSSSFVFAPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYL 126
           MR+LTG    SSSSF F P+S+V+FG TV+AEG D   ++SW+HAWT+ +G+IT V+EY 
Sbjct: 1   MRVLTGGVSPSSSSFEFVPLSVVSFGSTVIAEGCDAATSISWIHAWTVANGIITQVREYS 60

Query: 127 NTSVTVKRFA-TAADEESPSSSPPYAEADTLTTTNCQSVWQSKV---CGESVPGLVLAL 179
           NTS+TV R     A   S   +PP         ++C SVW+S+     G+ VPGLVLA+
Sbjct: 61  NTSLTVTRIGNVVAGRRSAEIAPP---------SHCSSVWESQFSGRAGKPVPGLVLAI 110

[Close]

BLAST of Carg07031 vs. Swiss-Prot
Match: sp|P20144|WUN1_SOLTU (Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.5e-20
Identity = 55/118 (46.61%), Postives = 75/118 (63.56%), Query Frame = 0


Query: 67  MRLLTGVS---SSSFVFAPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYL 126
           M++LTG +   ++SF F   +I  FG  VL EG D  R+++WVHAWT+TDGVIT V+EY 
Sbjct: 1   MQILTGTAKFDNASFQFLHKTIDVFGSVVLVEGCDPTRSITWVHAWTVTDGVITQVREYF 60

Query: 127 NTSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKV---CGESVPGLVLAL 179
           NTS+TV RF               ++  ++TT +C SVW+S +    G+SVPGLVLAL
Sbjct: 61  NTSLTVTRFGK-------------SDISSITTLHCPSVWESSLPNRVGKSVPGLVLAL 105

[Close]

BLAST of Carg07031 vs. TrEMBL
Match: tr|A0A2N9EI45|A0A2N9EI45_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2202 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.9e-48
Identity = 107/171 (62.57%), Postives = 129/171 (75.44%), Query Frame = 0


Query: 12  KLANSESPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLT 71
           +LANS++  E+ E +  +VTALY+ALSSKD + V RLLAPDLEWWFHGPP+HQ+LMRLLT
Sbjct: 5   QLANSQASLEEQEPNERVVTALYKALSSKDFDEVQRLLAPDLEWWFHGPPNHQHLMRLLT 64

Query: 72  GVS-SSSFVFAPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVTVK 131
           G S   SFVF P SIVAFG TVL EGYD +R+VSWVHAWT+TDG+IT V+EY NTSV V 
Sbjct: 65  GSSKEDSFVFVPQSIVAFGSTVLVEGYDKERSVSWVHAWTVTDGIITQVREYFNTSVIVA 124

Query: 132 RFATAADEESPSSSPPYAE-ADTLTTTN-CQSVWQSKVC-GESVPGLVLAL 179
           RF  +  +    +S   +  A TL + N CQSVW+SK+C   SVPGLVLAL
Sbjct: 125 RFGDSKGQGVGGASQTISSPAVTLKSVNKCQSVWESKLCDNNSVPGLVLAL 175

[Close]

BLAST of Carg07031 vs. TrEMBL
Match: tr|A0A2P4ICW9|A0A2P4ICW9_QUESU (Wound-induced protein 1 OS=Quercus suber OX=58331 GN=CFP56_15091 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.1e-47
Identity = 102/171 (59.65%), Postives = 125/171 (73.10%), Query Frame = 0


Query: 12  KLANSESPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRLLT 71
           +LAN ++  E+ E +  +V  LY+ALSSKD + V RLLAPDLEWWFHGPP+HQ+LM LLT
Sbjct: 131 ELANPQASLEEEEANERLVGTLYKALSSKDFDEVQRLLAPDLEWWFHGPPNHQHLMHLLT 190

Query: 72  G---VSSSSFVFAPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTSVT 131
           G    SSSSFVF P +IVAFG TVL EG++ +R+ SWVHAWT+TDG+IT V+EY NTSVT
Sbjct: 191 GSAPSSSSSFVFVPQTIVAFGSTVLVEGFEKERSASWVHAWTVTDGIITQVREYFNTSVT 250

Query: 132 VKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVCG-ESVPGLVLAL 179
           V RF   A +  P SSP      + +   CQSVW+SK+C   SVPGLVLAL
Sbjct: 251 VTRFGAGASQ--PISSPGVTTLRSASANKCQSVWESKLCDINSVPGLVLAL 299

[Close]

BLAST of Carg07031 vs. TrEMBL
Match: tr|F6GUH4|F6GUH4_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g07550 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.1e-47
Identity = 107/177 (60.45%), Postives = 132/177 (74.58%), Query Frame = 0


Query: 9   GNTKLANSESPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMR 68
           G ++LA++E+  E  E S  +V ALYEALS++DVETVH+LLAPDLEWWFHGPP+HQ+LM+
Sbjct: 54  GVSELAHTEAALE--ESSKRVVGALYEALSTRDVETVHQLLAPDLEWWFHGPPNHQHLMQ 113

Query: 69  LLTGVSSSS--FVFAPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLNTS 128
           LLTG SSS   F F P+SIVAFG TVL EGY+ +R+V+WVHAW +TDG+IT V+EY NTS
Sbjct: 114 LLTGSSSSDDPFHFDPVSIVAFGSTVLVEGYEERRSVAWVHAWVVTDGIITQVREYFNTS 173

Query: 129 VTVKRFA-TAADEESPSSSPPYAEADTLTTTNCQSVWQSKVC---GESVPGLVLALQ 180
           VTV R + T    E PS+S   A      +  C  VWQSKVC   G+SVPGL+LALQ
Sbjct: 174 VTVTRLSNTDKAAEGPSTSTTAAR-----SVPCTCVWQSKVCESMGKSVPGLLLALQ 223

[Close]

BLAST of Carg07031 vs. TrEMBL
Match: tr|A0A2H5Q3N1|A0A2H5Q3N1_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_190400 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.1e-45
Identity = 99/175 (56.57%), Postives = 124/175 (70.86%), Query Frame = 0


Query: 11  TKLANSE-SPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRL 70
           ++LANS+ S   ++E ++ +V  LY+AL+S DV+TVHRLL  DLEWWFHGPP HQ+LM +
Sbjct: 4   SELANSKASVDNEDEYNIRVVKTLYDALNSFDVKTVHRLLTSDLEWWFHGPPGHQHLMHM 63

Query: 71  LTGVSSSS-----FVFAPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLN 130
           LTG SSSS     F F P+S VAFGPTV+ EG+  + +VSWVHAWT+TDG+IT V+EY N
Sbjct: 64  LTGSSSSSEDKRCFTFVPLSTVAFGPTVIVEGHSKEHSVSWVHAWTVTDGIITQVREYFN 123

Query: 131 TSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVC-GESVPGLVLAL 179
           TSVTV RF       SP        A    +++CQSVWQSK+C   SVPGLVLAL
Sbjct: 124 TSVTVTRFGDPQLLSSP-------VAPVTVSSSCQSVWQSKLCDNNSVPGLVLAL 171

[Close]

BLAST of Carg07031 vs. TrEMBL
Match: tr|A0A067EEE9|A0A067EEE9_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g037228mg PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 5.1e-45
Identity = 99/175 (56.57%), Postives = 124/175 (70.86%), Query Frame = 0


Query: 11  TKLANSE-SPSEQNEISVAIVTALYEALSSKDVETVHRLLAPDLEWWFHGPPSHQYLMRL 70
           ++LANS+ S   ++E ++ +V  LY+AL+S DV+TVHRLL  DLEWWFHGPP HQ+LM +
Sbjct: 4   SELANSKASVDNEDEYNIRVVKTLYDALNSFDVKTVHRLLTSDLEWWFHGPPGHQHLMHM 63

Query: 71  LTGVSSSS-----FVFAPISIVAFGPTVLAEGYDTKRAVSWVHAWTITDGVITHVKEYLN 130
           LTG SSSS     F F P+S VAFGPTV+ EG+  + +VSWVHAWT+TDG+IT V+EY N
Sbjct: 64  LTGSSSSSEDKRCFTFVPLSTVAFGPTVIVEGHSKEHSVSWVHAWTVTDGIITQVREYFN 123

Query: 131 TSVTVKRFATAADEESPSSSPPYAEADTLTTTNCQSVWQSKVC-GESVPGLVLAL 179
           TSVTV RF       SP        A    +++CQSVWQSK+C   SVPGLVLAL
Sbjct: 124 TSVTVTRFGDPQLLSSP-------VAPVTVSSSCQSVWQSKLCDNNSVPGLVLAL 171

The following BLAST results are available for this feature:

BLAST of Carg07031 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023523043.1	5.1e-57	99.15	senescence associated gene 20-like [Cucurbita pepo subsp. pepo] >XP_023524551.1 ...	[more]
XP_022949246.1	8.8e-57	98.29	senescence associated gene 20-like [Cucurbita moschata]	[more]
XP_022998178.1	1.7e-55	96.58	senescence associated gene 20-like [Cucurbita maxima]	[more]
POE66369.1	1.7e-47	59.65	wound-induced protein 1 [Quercus suber]	[more]
XP_024951499.1	5.9e-45	56.57	senescence associated gene 20-like [Citrus sinensis]	[more]

BLAST of Carg07031 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G10985.1	1.7e-22	47.90	senescence associated gene 20	[more]
AT5G01740.1	5.5e-21	40.15	Nuclear transport factor 2 (NTF2) family protein	[more]

BLAST of Carg07031 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94AK6\|SAG20_ARATH	3.1e-21	47.90	Senescence associated gene 20 OS=Arabidopsis thaliana OX=3702 GN=SAG20 PE=2 SV=1	[more]
sp\|P20144\|WUN1_SOLTU	4.5e-20	46.61	Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1	[more]

BLAST of Carg07031 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A2N9EI45\|A0A2N9EI45_FAGSY	2.9e-48	62.57	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2202 PE=4 SV=1	[more]
tr\|A0A2P4ICW9\|A0A2P4ICW9_QUESU	1.1e-47	59.65	Wound-induced protein 1 OS=Quercus suber OX=58331 GN=CFP56_15091 PE=4 SV=1	[more]
tr\|F6GUH4\|F6GUH4_VITVI	7.1e-47	60.45	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g07550 PE=4 SV=...	[more]
tr\|A0A2H5Q3N1\|A0A2H5Q3N1_CITUN	5.1e-45	56.57	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_190400 PE=4 SV=1	[more]
tr\|A0A067EEE9\|A0A067EEE9_CITSI	5.1e-45	56.57	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g037228mg PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR032710	NTF2-like_dom_sf
IPR009798	Wun1-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg07031-RA	Carg07031-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.10.450.50		coord: 11..138 e-value: 9.9E-15 score: 56.5
None	No IPR available	PANTHER	PTHR33703:SF4	SUBFAMILY NOT NAMED	coord: 28..178
IPR009798	Wound-induced protein Wun1-like	PFAM	PF07107	WI12	coord: 67..178 e-value: 2.0E-31 score: 108.2
IPR009798	Wound-induced protein Wun1-like	PANTHER	PTHR33703	FAMILY NOT NAMED	coord: 28..178
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	SSF54427	NTF2-like	coord: 28..130

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg07031	Cla008106	Watermelon (97103) v1	carwmB0517
Carg07031	MELO3C020492	Melon (DHL92) v3.5.1	carmeB0524
Carg07031	ClCG03G000150	Watermelon (Charleston Gray)	carwcgB0506
Carg07031	CmaCh01G007130	Cucurbita maxima (Rimu)	carcmaB0731
Carg07031	CmoCh01G007400	Cucurbita moschata (Rifu)	carcmoB0708
Carg07031	Lsi02G012220	Bottle gourd (USVL1VR-Ls)	carlsiB472
Carg07031	MELO3C020492.2	Melon (DHL92) v3.6.1	carmedB0530
Carg07031	Cla97C03G050960	Watermelon (97103) v2	carwmbB0547
Carg07031	Bhi08G000355	Wax gourd	carwgoB0632

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg07031	Silver-seed gourd	carcarB350
Carg07031	Cucumber (Gy14) v2	carcgybB0525
Carg07031	Cucumber (Gy14) v2	carcgybB0526
Carg07031	Cucumber (Gy14) v1	carcgyB0597
Carg07031	Cucumber (Gy14) v1	carcgyB0602
Carg07031	Cucurbita maxima (Rimu)	carcmaB0728
Carg07031	Cucurbita moschata (Rifu)	carcmoB0705
Carg07031	Cucurbita pepo (Zucchini)	carcpeB0737
Carg07031	Cucurbita pepo (Zucchini)	carcpeB0738
Carg07031	Wild cucumber (PI 183967)	carcpiB0556
Carg07031	Cucumber (Chinese Long) v2	carcuB0549
Carg07031	Cucumber (Chinese Long) v3	carcucB0555
Carg07031	Bottle gourd (USVL1VR-Ls)	carlsiB475
Carg07031	Melon (DHL92) v3.5.1	carmeB0522
Carg07031	Melon (DHL92) v3.6.1	carmedB0528
Carg07031	Watermelon (Charleston Gray)	carwcgB0504
Carg07031	Watermelon (97103) v1	carwmB0515
Carg07031	Watermelon (97103) v2	carwmbB0544
Carg07031	Watermelon (97103) v2	carwmbB0545
Carg07031	Wax gourd	carwgoB0630