MELO3C020408 (gene) Melon (DHL92) v3.5.1

NameMELO3C020408
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionMethylenetetrahydrofolate reductase
Locationchr5 : 9511159 .. 9514054 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GCGATTTCCTATCGTCATTCCCCTTCTCTTTCACTCATTTCTCTCTTTCCATCTCTCATTCTCCTCTTTTTTTTTTTTTTTTTCTCTTTCGTAAGTCTTCACTTTCGATTCTATCCTTCTTCTACTTTCCCCCATATGTTTCACATTGTTCATTATTTCCATTGATTTCCAGGTTGCTGCTTCCGATCTCTAACTCCTACACCACTCAAGGGAAGAGAAGATGAAGGTGATTGACAAGATCCGGGCAGCCACCACCGGCGATGGCGGAAGAGTTGTTTTCTCCTTTGAGTACTTCCCTCCCAAGACAGAGGATGGTGTCGATAATCTTTTTGAGAGGATGGACCGTATGGTGGCTCATAATCCTTCCTTCTGCGACATTACTTGGGGCGCTGGTGGCTCCACTGCCGATCTCACCCTCGACATTGCCAACAAGATGCAGAACATGATCTGTGTTGAGACCATGATGCATCTCACTTGCACCAATATGCCTGTTGAGAAGATCGACCACGCTCTTCAGACTATCAAGGCCAATGGCCTTCAGAATGTCCTCGCGCTTCGCGGTGACCCTCCCCATGGACAGGACAAATTTGTCCAGATCGAAGGCGGCTTCGCTTGTGCTCTCGATCTTGTACTCTCTAAACCTTCGTCTGTGATTGTTTTTTGAATGTTAATTGTTTTTGCTCTCTAAATGTTTCCATTTCTTATTCATAGGTTAAACATATCAGGGAGAAATATGGTGACTACTTCGGCATTACTGTAGCTGGATATCCAGGTTTTTTTTTTTTTTTTTCTGATCAACAGTTACAGATCTACTTTTGGCTGCCTTTTCTTTTCTGTAACTAACGGAATGCTAATGGTTACTTCCACTCTGTTCTTCTCAGAGGCTCATCCGGATGTGATTGGAAGCAATGGCGTGGCGACGACTGAAGGCTACCAAAGCGATCTGGCTTATCTTAAGAAAAAGGTGACTCTGATCTTAAAGCAATCTTGATTGATCTTTTTCCTGTTCTTACATGGGTTACTTTTGATATGCTACTTTATTTGTTTTCTGCTTGCTGCTATTTTATTATTTTGTTTTGGGTTCTTCTCAGTTCGATGCTGGGGCTGATCTGATTGTTACTCAACTCTTCTATGACACTGACATTTTCCTCAAGTTTGTTAATGATTGTCGTCAAATTGGAATTACTTGCCCAATTGTACCTGGTATTATGCCCATCAATAATTACAAAGGTTTCTTACGCATGACTGGCTTTTGCAAAACTAAGGTATAACCTTCCTCTGATCTTCATTAATGGTCTTGATATAGGTTATAAGTATTAACACTTGTTCGTCGCACTTCATGATACTTCAAAATTTACAATCGGTGATCATCAATTTTTTATTTTTCTTCTCCAAAGAAAAACTACTTTGATGTATAGTGTTAAATTTTTTCTCTTCTACCTATATGCGTGATTTTTGAAAACCTACAGATTCCAGACGAGATCATGGCTGCCTTAGAGCCTATCAAGGATAATGAAGAAGCTGTCAAAGCTTATGGAATTCACCTTGGAACTGAGATGTGTAAGAAGATTTTGGCTCATGGAATCAAGACTCTGCATATTTATACACTGAATATGGAGAAATCGGCATTGGCTATACTAATGGTATATTCCAGTATACAATGAATGGCATTCTTGTTTTACTTCAAGATATTGTTTCTGTGGGTAATTTTGTCTGTGGATGCTCTGGTACAAGGGGAAGTTTCTGAAGCTTTTGTTGACGTGTTGTATTGGTGGGTGGTTTCCGTTTATTGAATATGGCTTCCTTTCATTTCTTAATCTTGGTTCATGTTTTATTTGAACAACTGAGAATCTGCATCTACCTTTGAAGTAAACTTGTAAGGAGTCATAAAGTAATTGTTATAATGAAAACTTCTGAATGTTAATTGCTGATACGCCTGTTAGAAGTATGTTTTGAAACACTGCCACAATTATCGTATACTAAGAGGAACATGAGACTCATACACTTCTATACGTTTTAATATAGAATAAATATATTATAACATGAGAGTTTTTTTTTTTTTTCATTGGATGTCCTTAGGCTCCCTTTTTCTATTATAAAGTAATTTATACTTCATTGTTCTTTTTCTCATTCTTTTTGTACATTATTATTAGGGATAGTTGCAAATATAGCAATTAGATTCAAAATATTAGTATATATAGCAACATTTTTTTTTTTAAATTACAAATATAACAAAATCTGTCAAAGTTCATCAATGATAGAAGTCTATCGTTGATAGACCATGTTGCAAATATTGGTCTATCACTAGTAGACCATAAGTGTCTATCGGCGGTAGAAGTCTATCACCTATTGATTTTGCTATATTTGCAATATTTTTAAAATGTTGCTATATACTTAATTATTATTTCTAAAATTGCTTCTTATTGTAATTACCCTTATTATTGTTACTATTTATTTATTTTGGAGGCTTGTAGTTTATTTATTTATTATTGTTATTATTTATTTATTTCATGTCGATAAATCATGTCTGAGTGCACTTCTACACTCATGGCAGAATCTTGGTCTCATTGAAGAGAGCAAAGTCTCTAGATCCTTGCCTTGGAGGCGACCGACAAATGTTTTCCGTGTCAGGGAGGATGTTCGTCCAATCTTCTGGTATTTCTTCTGCTTATTGCAAACCAAGGATGCATTCCTAATGGTTTTTGGGTGCATAAATTTTTTTTTTATTCACCAGGTTAATATTGAGATAGAGCTGATCTATTTAGTTGTTGATTACAGGGCTAATCGTCCTCGAAGCTACATATCAAGGACCATAGGTTGGGACCAGTACCCCCATGGTAGATGGAGTGATTCTAGAAATCCTTCATATGGGGCATTGACTGACTATCAGGTATGA

mRNA sequence

GCGATTTCCTATCGTCATTCCCCTTCTCTTTCACTCATTTCTCTCTTTCCATCTCTCATTCTCCTCTTTTTTTTTTTTTTTTTCTCTTTCGTAAGTCTTCACTTTCGATTCTATCCTTCTTCTACTTTCCCCCATATGTTTCACATTGTTCATTATTTCCATTGATTTCCAGGTTGCTGCTTCCGATCTCTAACTCCTACACCACTCAAGGGAAGAGAAGATGAAGGTGATTGACAAGATCCGGGCAGCCACCACCGGCGATGGCGGAAGAGTTGTTTTCTCCTTTGAGTACTTCCCTCCCAAGACAGAGGATGGTGTCGATAATCTTTTTGAGAGGATGGACCGTATGGTGGCTCATAATCCTTCCTTCTGCGACATTACTTGGGGCGCTGGTGGCTCCACTGCCGATCTCACCCTCGACATTGCCAACAAGATGCAGAACATGATCTGTGTTGAGACCATGATGCATCTCACTTGCACCAATATGCCTGTTGAGAAGATCGACCACGCTCTTCAGACTATCAAGGCCAATGGCCTTCAGAATGTCCTCGCGCTTCGCGGTGACCCTCCCCATGGACAGGACAAATTTGTCCAGATCGAAGGCGGCTTCGCTTGTGCTCTCGATCTTGTTAAACATATCAGGGAGAAATATGGTGACTACTTCGGCATTACTGTAGCTGGATATCCAGAGGCTCATCCGGATGTGATTGGAAGCAATGGCGTGGCGACGACTGAAGGCTACCAAAGCGATCTGGCTTATCTTAAGAAAAAGTTCGATGCTGGGGCTGATCTGATTGTTACTCAACTCTTCTATGACACTGACATTTTCCTCAAGTTTGTTAATGATTGTCGTCAAATTGGAATTACTTGCCCAATTGTACCTGGTATTATGCCCATCAATAATTACAAAGGTTTCTTACGCATGACTGGCTTTTGCAAAACTAAGATTCCAGACGAGATCATGGCTGCCTTAGAGCCTATCAAGGATAATGAAGAAGCTGTCAAAGCTTATGGAATTCACCTTGGAACTGAGATGTGTAAGAAGATTTTGGCTCATGGAATCAAGACTCTGCATATTTATACACTGAATATGGAGAAATCGGCATTGGCTATACTAATGAATCTTGGTCTCATTGAAGAGAGCAAAGTCTCTAGATCCTTGCCTTGGAGGCGACCGACAAATGTTTTCCGTGTCAGGGAGGATGTTCGTCCAATCTTCTGGGCTAATCGTCCTCGAAGCTACATATCAAGGACCATAGGTTGGGACCAGTACCCCCATGGTAGATGGAGTGATTCTAGAAATCCTTCATATGGGGCATTGACTGACTATCAGGTATGA

Coding sequence (CDS)

ATGAAGGTGATTGACAAGATCCGGGCAGCCACCACCGGCGATGGCGGAAGAGTTGTTTTCTCCTTTGAGTACTTCCCTCCCAAGACAGAGGATGGTGTCGATAATCTTTTTGAGAGGATGGACCGTATGGTGGCTCATAATCCTTCCTTCTGCGACATTACTTGGGGCGCTGGTGGCTCCACTGCCGATCTCACCCTCGACATTGCCAACAAGATGCAGAACATGATCTGTGTTGAGACCATGATGCATCTCACTTGCACCAATATGCCTGTTGAGAAGATCGACCACGCTCTTCAGACTATCAAGGCCAATGGCCTTCAGAATGTCCTCGCGCTTCGCGGTGACCCTCCCCATGGACAGGACAAATTTGTCCAGATCGAAGGCGGCTTCGCTTGTGCTCTCGATCTTGTTAAACATATCAGGGAGAAATATGGTGACTACTTCGGCATTACTGTAGCTGGATATCCAGAGGCTCATCCGGATGTGATTGGAAGCAATGGCGTGGCGACGACTGAAGGCTACCAAAGCGATCTGGCTTATCTTAAGAAAAAGTTCGATGCTGGGGCTGATCTGATTGTTACTCAACTCTTCTATGACACTGACATTTTCCTCAAGTTTGTTAATGATTGTCGTCAAATTGGAATTACTTGCCCAATTGTACCTGGTATTATGCCCATCAATAATTACAAAGGTTTCTTACGCATGACTGGCTTTTGCAAAACTAAGATTCCAGACGAGATCATGGCTGCCTTAGAGCCTATCAAGGATAATGAAGAAGCTGTCAAAGCTTATGGAATTCACCTTGGAACTGAGATGTGTAAGAAGATTTTGGCTCATGGAATCAAGACTCTGCATATTTATACACTGAATATGGAGAAATCGGCATTGGCTATACTAATGAATCTTGGTCTCATTGAAGAGAGCAAAGTCTCTAGATCCTTGCCTTGGAGGCGACCGACAAATGTTTTCCGTGTCAGGGAGGATGTTCGTCCAATCTTCTGGGCTAATCGTCCTCGAAGCTACATATCAAGGACCATAGGTTGGGACCAGTACCCCCATGGTAGATGGAGTGATTCTAGAAATCCTTCATATGGGGCATTGACTGACTATCAGGTATGA
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR003171Mehydrof_redctse
IPR004621Fadh2_euk
Vocabulary: Molecular Function
TermDefinition
GO:0004489methylenetetrahydrofolate reductase (NAD(P)H) activity
Vocabulary: Biological Process
TermDefinition
GO:0006555methionine metabolic process
GO:0055114oxidation-reduction process
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0035999 tetrahydrofolate interconversion
biological_process GO:0006555 methionine metabolic process
biological_process GO:0046653 tetrahydrofolate metabolic process
cellular_component GO:0005829 cytosol
cellular_component GO:0005575 cellular_component
molecular_function GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU66980melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C020408T2MELO3C020408T2mRNA
MELO3C020408T1MELO3C020408T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU66980MU66980transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003171Methylenetetrahydrofolate reductasePFAMPF02219MTHFRcoord: 15..303
score: 4.0E
IPR004621Eukaryotic-type methylenetetrahydrofolate reductaseTIGRFAMsTIGR00677TIGR00677coord: 19..307
score: 2.8E
NoneNo IPR availablePANTHERPTHR21091METHYLTETRAHYDROFOLATE:HOMOCYSTEINE METHYLTRANSFERASE RELATEDcoord: 131..149
score: 1.3E-126coord: 180..372
score: 1.3E
NoneNo IPR availablePANTHERPTHR21091:SF31METHYLENETETRAHYDROFOLATE REDUCTASEcoord: 131..149
score: 1.3E-126coord: 180..372
score: 1.3E

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C020408Wild cucumber (PI 183967)cpimeB134
MELO3C020408Cucumber (Chinese Long) v2cumeB134