MELO3C019904 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C019904
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionMYB transcription factor
Locationchr3 : 21166430 .. 21168713 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCGATTCTTTTTCTGCATGTAAAATCCTATAAATACAAACCCACAAGTTTTTCAATCCTTCCCAACAAAACCCATTTCCCAATTCTTCATAAAAACTCTTCTAAATCCCTCCCATCAATCAAATCAGATCAAATCAAATCCCCCTTCTCTCTGTTTTTCCTTCTTATGTTTCACGACAGTCGGTGGACGACCATGACTCAGTCTTCGACTCACTGGACTCGGTCCGAGGACAAGCTTTTCGAGGAGGCTTTGGTGGTTGTTCCGGCCAACTTACCTGATCGCTGGCAAAGGGTCGCCGACCATGTCCCTGGTAAGTCGCCGAGGGAGGTTAAAGATCACTACGAGGCTTTGGTTCACGATGTCCTTGAAATTGACTCTGGTCGAGTTGAGTTGCCCAGTTATGCCGAGGAATCGGCGGTGGGTTTGCCGGAATGGGACTCTTCTGGACAGATCTCTTTTGGATCCAAGGCTAAGCATGGTGGAGATAACGAGAGGAAGAAAGGAACGCCATGGACTGAAGAAGAACATAGGTATTTATTTTTCAATATACATATCGACCCTTTTTGCTTCAATTTTATACTCTCTCCTTCTGTTTGGCTGCTGTGAAAATGGTGGGAAAACGGGAGGGATGAACAAACAAAGAGAATTCTAATTTGGTTTTGGGTTTTGTGTTTTATGTGTTTGGTTTCTTATTCCACCTTCCAATTTGGGAATTCCTAAGATTTAATCACCGTTTTCTGATTTAGAATTGCTTGTTTCTTGTGTATTATGCACCCTGATTTTCAGTTTTGTAAGGAGGAGGGGGGAATTTTGGAACTTTCATTTTAAGAAATTGAGGTCCTGTGATTTTGGAGTACCTAAATTTAGGAAGAATCTCGTTAGAATGAAGAGGTTAAGTTTACAGATGGAGTTCTTGTTCTTGATATGGTTTATATGCGATGCAACGTCTTGGGATTTATTGGAAAAGCGACACAACACTGTCCCCTGGACAAGAATCTTGATAATTTTTATTGTTAACAAACTCGAACCATCTTTTGGAATTGAGTTTAAGAGCAAGAATTCGACCAAGAACACGAAGATTGGAAAATCTTGATTTGTTTTCTTTGAGTAAGCCTGAGTGTTTAAGCTGGTTTTTGCAACAACCACTTAACCTTATGACATTGACATTCAGAAAGTTGATTGGCTGGACTATGTTTAATATCTTAGGTAGGTTACATACATGACAACTGGTTTCATGATTTCCCCTTCTAAATTGATGAGCTTGAGTGATGTTCGAAAAGAATATCACTGTCCCATTGTAGATTGCTGTTGAGAGTTAGCCTAAAAGCTCAAGCTAGTGTGTTGTTCTAGAGATCTGTTGTTGTTGCAGCTGTTGCTTCATAACGCATACCTAAAATTGAGTTCAACGCTTGAATATAGACCAATGAGGAAAACAAAAGCTCGCAAATATGAAAATGATGTTATTATAGAGATTTTAACTCTTTACTTTATAGGTTTTGTGATGCAACTATGTGTTTTGACATTGTGACAGGCTATTTCTCCTTGGACTGAAAAAATTCGGTAAGGGAGATTGGAGGAGCATCTCAAGGAATGTAGTGATCACAAGAACACCCACACAAGTAGCAAGTCATGCTCAGAAATACTTTCTCCGACAAACCTCCGGTAAGAAAGAGAGGAAACGATCAAGCATTCACGACATCACAACAGTCGACAACAACTCCATCCCCATGCCTATTGACCCCAATTGGATATCTCCAGCCCCCAACAATCCAACCATTCAATCAACTATGCAACAGTTAAGTCCAACAAGTCACGGGCAAGACCAAGGAGCTTCACTTGGGTTCCAAAACTACCGGTTCCCAATGTAGCAATCAACTAGATAACCCTTAGAAAACTACCACCATTACTACAATGTAAATACACCAAAAATATCTGTAAAGACCAACCTACATACATGCCCGGGGGTTTGGTTTCGTCGTTCTTTTGGTTGCCACAGTTTAGAGAGAACCCTGCCTGTAAGTAAATAGAGAAGAAAGGAGAAAGTATTAGAAGTTAGTAGTAGTGAATGATTGTTAGAAACAGCAGTTAAAAGCTAATGTAAAAGAATTAGGGAAAAACACAGAATATGAATGGCAAAACAAAATTCTTTGTTGGATTGTGACAAGTCCTGCAAGCAGATTTTTGTGGCAGGAAGTTTCACTTTCATTCGTTAGATTACTGTTTGTTGGGCTGAAGATTTAGACTGATTACTCTTCTTTTATGGAATTGGGCTTTGACTTTGT

mRNA sequence

AATCGATTCTTTTTCTGCATGTAAAATCCTATAAATACAAACCCACAAGTTTTTCAATCCTTCCCAACAAAACCCATTTCCCAATTCTTCATAAAAACTCTTCTAAATCCCTCCCATCAATCAAATCAGATCAAATCAAATCCCCCTTCTCTCTGTTTTTCCTTCTTATGTTTCACGACAGTCGGTGGACGACCATGACTCAGTCTTCGACTCACTGGACTCGGTCCGAGGACAAGCTTTTCGAGGAGGCTTTGGTGGTTGTTCCGGCCAACTTACCTGATCGCTGGCAAAGGGTCGCCGACCATGTCCCTGGTAAGTCGCCGAGGGAGGTTAAAGATCACTACGAGGCTTTGGTTCACGATGTCCTTGAAATTGACTCTGGTCGAGTTGAGTTGCCCAGTTATGCCGAGGAATCGGCGGTGGGTTTGCCGGAATGGGACTCTTCTGGACAGATCTCTTTTGGATCCAAGGCTAAGCATGGTGGAGATAACGAGAGGAAGAAAGGAACGCCATGGACTGAAGAAGAACATAGGCTATTTCTCCTTGGACTGAAAAAATTCGGTAAGGGAGATTGGAGGAGCATCTCAAGGAATGTAGTGATCACAAGAACACCCACACAAGTAGCAAGTCATGCTCAGAAATACTTTCTCCGACAAACCTCCGGTAAGAAAGAGAGGAAACGATCAAGCATTCACGACATCACAACAGTCGACAACAACTCCATCCCCATGCCTATTGACCCCAATTGGATATCTCCAGCCCCCAACAATCCAACCATTCAATCAACTATGCAACAGTTAAGTCCAACAAGTCACGGGCAAGACCAAGGAGCTTCACTTGGGTTCCAAAACTACCGGTTCCCAATGTAGCAATCAACTAGATAACCCTTAGAAAACTACCACCATTACTACAATGTAAATACACCAAAAATATCTGTAAAGACCAACCTACATACATGCCCGGGGGTTTGGTTTCGTCGTTCTTTTGGTTGCCACAGTTTAGAGAGAACCCTGCCTGTAAGTAAATAGAGAAGAAAGGAGAAAGTATTAGAAGTTAGTAGTAGTGAATGATTGTTAGAAACAGCAGTTAAAAGCTAATGTAAAAGAATTAGGGAAAAACACAGAATATGAATGGCAAAACAAAATTCTTTGTTGGATTGTGACAAGTCCTGCAAGCAGATTTTTGTGGCAGGAAGTTTCACTTTCATTCGTTAGATTACTGTTTGTTGGGCTGAAGATTTAGACTGATTACTCTTCTTTTATGGAATTGGGCTTTGACTTTGT

Coding sequence (CDS)

ATGTTTCACGACAGTCGGTGGACGACCATGACTCAGTCTTCGACTCACTGGACTCGGTCCGAGGACAAGCTTTTCGAGGAGGCTTTGGTGGTTGTTCCGGCCAACTTACCTGATCGCTGGCAAAGGGTCGCCGACCATGTCCCTGGTAAGTCGCCGAGGGAGGTTAAAGATCACTACGAGGCTTTGGTTCACGATGTCCTTGAAATTGACTCTGGTCGAGTTGAGTTGCCCAGTTATGCCGAGGAATCGGCGGTGGGTTTGCCGGAATGGGACTCTTCTGGACAGATCTCTTTTGGATCCAAGGCTAAGCATGGTGGAGATAACGAGAGGAAGAAAGGAACGCCATGGACTGAAGAAGAACATAGGCTATTTCTCCTTGGACTGAAAAAATTCGGTAAGGGAGATTGGAGGAGCATCTCAAGGAATGTAGTGATCACAAGAACACCCACACAAGTAGCAAGTCATGCTCAGAAATACTTTCTCCGACAAACCTCCGGTAAGAAAGAGAGGAAACGATCAAGCATTCACGACATCACAACAGTCGACAACAACTCCATCCCCATGCCTATTGACCCCAATTGGATATCTCCAGCCCCCAACAATCCAACCATTCAATCAACTATGCAACAGTTAAGTCCAACAAGTCACGGGCAAGACCAAGGAGCTTCACTTGGGTTCCAAAACTACCGGTTCCCAATGTAG

Protein sequence

MFHDSRWTTMTQSSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYEALVHDVLEIDSGRVELPSYAEESAVGLPEWDSSGQISFGSKAKHGGDNERKKGTPWTEEEHRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIHDITTVDNNSIPMPIDPNWISPAPNNPTIQSTMQQLSPTSHGQDQGASLGFQNYRFPM*
Homology
[Close]
BLAST of MELO3C019904 vs. Swiss-Prot
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 204.9 bits (520), Expect = 9.5e-52
Identity = 113/226 (50.00%), Postives = 141/226 (62.39%), Query Frame = 1 

Query: 2   FHDSRW-TTMTQSSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYE 61
           F  S W    ++S+T WT +E+K FE AL V   N P+RW+RVA+ VPGK+  +V   Y+
Sbjct: 10  FSSSSWFLEESRSTTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYK 69

Query: 62  ALVHDVLEIDSGRVELPSYAEESAVGLPEWDSSGQISFGSKAKHG-----------GDNE 121
            L  DV  I++G V +P Y+  S   L EW  SG    G K  +G            + E
Sbjct: 70  ELEDDVSSIEAGFVPVPGYSTSSPFTL-EW-GSGHGFDGFKQSYGTGGRKSSSGRPSEQE 129

Query: 122 RKKGTPWTEEEHRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKE 181
           RKKG PWTEEEH+LFL+GLKK+GKGDWR+ISRN VITRTPTQVASHAQKYF+RQ SG K+
Sbjct: 130 RKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKD 189

Query: 182 RKRSSIHDITTVDNNSIPMPIDPNWISPAPNNPTIQSTMQQLSPTS 216
           ++R+SIHDITTV+ +    P   N     P++P      QQ S TS
Sbjct: 190 KRRASIHDITTVNLSDNQTPSPDN--KKPPSSPDHSMAQQQTSSTS 231

[Close]
BLAST of MELO3C019904 vs. Swiss-Prot
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.0e-26
Identity = 65/111 (58.56%), Postives = 79/111 (71.17%), Query Frame = 1 

Query: 81  EESAVGLPEWDSSGQISFGSKAKHGGDNERKKGTPWTEEEHRLFLLGLKKFGKGDWRSIS 140
           E S V   E  +S   +   ++  G   ERK+G PWTEEEH+LFLLGL+K GKGDWR IS
Sbjct: 64  ESSKVAQDEGYASADDAVQHQSNSG--RERKRGVPWTEEEHKLFLLGLQKVGKGDWRGIS 123

Query: 141 RNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIHDITTVDNNSIPMPID 192
           RN V TRTPTQVASHAQKYFLR+++  + R+RSS+ DITT D+ S+ MPI+
Sbjct: 124 RNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITT-DSVSV-MPIE 170

[Close]
BLAST of MELO3C019904 vs. Swiss-Prot
Match: RADL3_ARATH (Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.1e-12
Identity = 36/67 (53.73%), Postives = 41/67 (61.19%), Query Frame = 1 

Query: 13 SSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYEALVHDVLEIDSG 72
          SS  WTR E+KLFE AL     + PDRW  VA  V GKS  EV+ HYE L+ DV +I+SG
Sbjct: 8  SSASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDIESG 67

Query: 73 RVELPSY 80
          R   P+Y
Sbjct: 68 RYPHPNY 74

[Close]
BLAST of MELO3C019904 vs. Swiss-Prot
Match: RADL6_ARATH (Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 3.3e-12
Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 1 

Query: 13 SSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYEALVHDVLEIDSG 72
          S + WT S++K+FE AL V   + PDRW  VA  V GK+  EVK HY+ LV D++ I++G
Sbjct: 8  SISPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETG 67

Query: 73 RVELPSY 80
          RV LP+Y
Sbjct: 68 RVPLPNY 74

[Close]
BLAST of MELO3C019904 vs. Swiss-Prot
Match: RADL4_ARATH (Protein RADIALIS-like 4 OS=Arabidopsis thaliana GN=RL4 PE=2 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 7.4e-12
Identity = 35/69 (50.72%), Postives = 42/69 (60.87%), Query Frame = 1 

Query: 11 TQSSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYEALVHDVLEID 70
          + S++ WT  EDK FE AL     + PDRWQ++A  V GKS  EVK HYE L+ DV +I+
Sbjct: 5  SMSTSSWTAREDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDIE 64

Query: 71 SGRVELPSY 80
          SGR   P Y
Sbjct: 65 SGRYPQPRY 73

[Close]
BLAST of MELO3C019904 vs. TrEMBL
Match: A0A0A0KE73_CUCSA (Syringolide-induced protein 1-3-1B OS=Cucumis sativus GN=Csa_6G046240 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 1.7e-132
Identity = 229/233 (98.28%), Postives = 232/233 (99.57%), Query Frame = 1 

Query: 1   MFHDSRWTTMTQSSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYE 60
           MFH +RWTTMTQSSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHY+
Sbjct: 1   MFHHTRWTTMTQSSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYD 60

Query: 61  ALVHDVLEIDSGRVELPSYAEESAVGLPEWDSSGQISFGSKAKHGGDNERKKGTPWTEEE 120
           ALVHDVLEIDSGRVELPSYA+ESAVGLPEWDSSGQISFGSKAKHGGDNERKKGTPWTEEE
Sbjct: 61  ALVHDVLEIDSGRVELPSYADESAVGLPEWDSSGQISFGSKAKHGGDNERKKGTPWTEEE 120

Query: 121 HRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIHDITT 180
           HRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIHDITT
Sbjct: 121 HRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIHDITT 180

Query: 181 VDNNSIPMPIDPNWISPAPNNPTIQSTMQQLSPTSHGQDQGASLGFQNYRFPM 234
           VDNNSIPMPIDPNWISPAPNNPTIQSTMQQLSPTSHGQDQGASLGFQNYRFPM
Sbjct: 181 VDNNSIPMPIDPNWISPAPNNPTIQSTMQQLSPTSHGQDQGASLGFQNYRFPM 233

[Close]
BLAST of MELO3C019904 vs. TrEMBL
Match: G7ZYT0_MEDTR (DnaJ homolog subfamily C member OS=Medicago truncatula GN=MTR_1g111830 PE=4 SV=1)

HSP 1 Score: 330.5 bits (846), Expect = 1.7e-87
Identity = 160/234 (68.38%), Postives = 191/234 (81.62%), Query Frame = 1 

Query: 5   SRWTTMTQSSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYEALVH 64
           +RW T     T WTR  DKLFE AL++VP +LPDRW+++A+ VPGKS  E++DHYEALVH
Sbjct: 15  TRWPTQP---TQWTRDHDKLFERALLMVPEDLPDRWEKIAEQVPGKSAAEIRDHYEALVH 74

Query: 65  DVLEIDSGRVELPSYAEESAV---GLPEWDSSGQISFGSKAKHGGDNERKKGTPWTEEEH 124
           D+LEIDSGRVE+PSY++ESAV   GL EWDSS QISFGSK +HGGDNERKKGTPWTEEEH
Sbjct: 75  DILEIDSGRVEVPSYSDESAVSGGGLAEWDSSNQISFGSKPRHGGDNERKKGTPWTEEEH 134

Query: 125 RLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIHDITTV 184
           RLFL+GL KFGKGDWRSISRNVV+TRTPTQVASHAQKYFLRQ S KKERKRSSIHDIT+V
Sbjct: 135 RLFLIGLTKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITSV 194

Query: 185 DNNSIPMPIDPNWISPAPNNPTIQSTMQQLS--PTSHGQDQGASLGFQNYRFPM 234
           D+NS P+PID NW+ P P   ++Q    ++   P+++ QDQ ++ G+ NY F M
Sbjct: 195 DSNSAPVPIDQNWV-PPPGGGSMQQQSPEMHHYPSNNLQDQMSAYGYSNYGFQM 244

[Close]
BLAST of MELO3C019904 vs. TrEMBL
Match: V7BAF7_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G023600g PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 6.6e-84
Identity = 159/242 (65.70%), Postives = 183/242 (75.62%), Query Frame = 1 

Query: 1   MFHDS---RWTTMTQSSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKD 60
           MFH+S   RW T     T WTR  DKLFE AL++VP +LPDRW ++A HVPG SP EV++
Sbjct: 1   MFHESSVTRWQTQPVQPTEWTRYHDKLFERALLLVPEDLPDRWNQIAGHVPGMSPAEVRE 60

Query: 61  HYEALVHDVLEIDSGRVELPSYAEESA------VGLPEWDSSGQISFGSKAKHGGDNERK 120
           HY+ALVHDV EIDSGRVE+PSY ++SA       G   WDS+ QISFGSK K G D+ERK
Sbjct: 61  HYDALVHDVFEIDSGRVEVPSYVDDSAPQLSGGAGNSAWDSANQISFGSKPKQG-DSERK 120

Query: 121 KGTPWTEEEHRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERK 180
           KGTPWTEEEHRLFL+GL KFGKGDWRSISRNVV+TRTPTQVASHAQKYFLRQ SGKKERK
Sbjct: 121 KGTPWTEEEHRLFLIGLSKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSGKKERK 180

Query: 181 RSSIHDITTVDNNSIPMPIDPNWISPAPNNPTIQSTMQQLSPTSHGQDQGASLGFQNYRF 234
           RSSIHDITTVD+NS+P+PID NW+ P P     QS      P+S+  DQ    G+ +Y F
Sbjct: 181 RSSIHDITTVDSNSVPVPIDQNWV-PPPGASMQQSQDMLQYPSSNMHDQMGPFGYSSYGF 240

[Close]
BLAST of MELO3C019904 vs. TrEMBL
Match: M5WIS8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010926mg PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 3.3e-83
Identity = 156/228 (68.42%), Postives = 184/228 (80.70%), Query Frame = 1 

Query: 7   WTTMTQS-STHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYEALVHD 66
           W++M QS S  WTR EDKLFE+ALV    +LPDRW+R+A  VPGK+P EV +HYE LVHD
Sbjct: 9   WSSMAQSASAPWTRFEDKLFEQALVRFSEDLPDRWERIAGEVPGKTPEEVLEHYETLVHD 68

Query: 67  VLEIDSGRVELPSYAEESAVGLPEWDSSGQISFGSKAKHGGDNERKKGTPWTEEEHRLFL 126
           VLEIDSGRVELPSYA++S VG   WD++ QISFGSK    G+ ERKKGTPWTE+EH+LFL
Sbjct: 69  VLEIDSGRVELPSYADDSVVG---WDTASQISFGSKLNKHGEPERKKGTPWTEQEHKLFL 128

Query: 127 LGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIHDITTVDNNS 186
           +GLKKFGKGDWRSISRNVV+TRTPTQVASHAQKYFLRQ+S KKERKRSSIHDITTV++NS
Sbjct: 129 IGLKKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQSSVKKERKRSSIHDITTVESNS 188

Query: 187 IPMPIDPNWISPAPNNPTIQSTMQQLSPTSHGQDQGASLGFQNYRFPM 234
           + +P D NWI P P  P  Q  +QQ  P  H  DQG S+G+Q++ +PM
Sbjct: 189 VAVPADRNWI-PPPGVPAQQPPLQQ--PQGHLPDQGGSMGYQDFGYPM 230

[Close]
BLAST of MELO3C019904 vs. TrEMBL
Match: Q8S8Z9_SOYBN (Syringolide-induced protein 1-3-1B OS=Glycine max GN=1-3-1B PE=2 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 4.3e-83
Identity = 156/240 (65.00%), Postives = 183/240 (76.25%), Query Frame = 1 

Query: 1   MFHDSRWTTMTQSSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYE 60
           MF +S  T      T WTR  DKLFE AL+VVP +LPDRW+++AD VPGKS  EV++HYE
Sbjct: 1   MFQESSATRWPTQPTQWTRYHDKLFERALLVVPEDLPDRWEKIADQVPGKSAVEVREHYE 60

Query: 61  ALVHDVLEIDSGRVELPSYAEESAVGLPE-------WDSSGQISFGSKAKHGGDNERKKG 120
           ALVHDV EIDSGRVE+PSY ++S    P        WD++ QISFGSK K  GDNERKKG
Sbjct: 61  ALVHDVFEIDSGRVEVPSYVDDSVATPPSGGAEISTWDNANQISFGSKPKQQGDNERKKG 120

Query: 121 TPWTEEEHRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRS 180
           TPWTEEEHRLFL+GL KFGKGDWRSISRNVV+TRTPTQVASHAQKYFLRQ S KKERKRS
Sbjct: 121 TPWTEEEHRLFLIGLSKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRS 180

Query: 181 SIHDITTVDNNSIPMPIDPNWISPAPNNPTIQSTMQQLSPTSHGQDQGASLGFQNYRFPM 234
           SIHDITTVD+NS+P+PID NW+ P     ++Q ++Q   P+S+  DQ  + G+ NY F M
Sbjct: 181 SIHDITTVDSNSVPVPIDQNWVPPP--GGSVQQSLQY--PSSNMLDQMGTFGYSNYGFGM 236

[Close]
BLAST of MELO3C019904 vs. TAIR10
Match: AT5G04760.1 (AT5G04760.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 255.4 bits (651), Expect = 3.5e-68
Identity = 134/216 (62.04%), Postives = 160/216 (74.07%), Query Frame = 1 

Query: 13  SSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYEALVHDVLEIDSG 72
           +S+ WTRSEDK+FE+ALV+ P   P+RW+R+AD +  KS  EV++HYE LVHDV EIDSG
Sbjct: 2   ASSQWTRSEDKMFEQALVLFPEGSPNRWERIADQLH-KSAGEVREHYEVLVHDVFEIDSG 61

Query: 73  RVELPSYAEESAVGLPEWDSSGQISFGSKAKHGGDNERKKGTPWTEEEHRLFLLGLKKFG 132
           RV++P Y ++SA     WDS+GQISFGSK    G++ERK+GTPWTE EH+LFL+GLK++G
Sbjct: 62  RVDVPDYMDDSAAAAAGWDSAGQISFGSKH---GESERKRGTPWTENEHKLFLIGLKRYG 121

Query: 133 KGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIHDITTVDNNSIPMPIDP 192
           KGDWRSISRNVV+TRTPTQVASHAQKYFLRQ S KKERKRSSIHDITTVD        + 
Sbjct: 122 KGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITTVDATLAMPGSNM 181

Query: 193 NWI----SP--APNNPTIQSTM-QQLSPTSHGQDQG 222
           +W     SP  AP    I S   QQL+P  H +D G
Sbjct: 182 DWTGQHGSPVQAPQQQQIMSEFGQQLNP-GHFEDFG 212

[Close]
BLAST of MELO3C019904 vs. TAIR10
Match: AT5G08520.1 (AT5G08520.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 188.0 bits (476), Expect = 6.8e-48
Identity = 98/191 (51.31%), Postives = 119/191 (62.30%), Query Frame = 1 

Query: 17  WTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYEALVHDVLEIDSGRVEL 76
           W+R +D  FE AL        +RW+++A  VPGKS  ++K+HYE LV DV  I+SG V L
Sbjct: 12  WSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVTRIESGCVPL 71

Query: 77  PSYAEESAVGLPEWDSSGQISFGSKAKHGG---------------DNERKKGTPWTEEEH 136
           P+Y      G PE  +      G+ +K GG               D ER+KG  WTE+EH
Sbjct: 72  PAY------GSPEGSNGHAGDEGASSKKGGNSHAGESNQAGKSKSDQERRKGIAWTEDEH 131

Query: 137 RLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIHDITTV 193
           RLFLLGL K+GKGDWRSISRN V+TRTPTQVASHAQKYF+R  S  K+R+RSSIHDIT+V
Sbjct: 132 RLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSV 191

[Close]
BLAST of MELO3C019904 vs. TAIR10
Match: AT2G38090.1 (AT2G38090.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 186.8 bits (473), Expect = 1.5e-47
Identity = 105/231 (45.45%), Postives = 136/231 (58.87%), Query Frame = 1 

Query: 5   SRWTTMTQSSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYEALVH 64
           S W       T WT  E+K FE AL     + PDRW RVA  +PGK+  +V   Y  L  
Sbjct: 17  SNWLFQENRGTKWTAEENKKFENALAFYDKDTPDRWSRVAAMLPGKTVGDVIKQYRELEE 76

Query: 65  DVLEIDSGRVELPSYAEES----------AVGLPEWDSSGQISFGSKAKHGG-----DNE 124
           DV +I++G + +P YA +S          A G   ++ +G     +  K G      ++E
Sbjct: 77  DVSDIEAGLIPIPGYASDSFTLDWGGYDGASGNNGFNMNGYYFSAAGGKRGSAARTAEHE 136

Query: 125 RKKGTPWTEEEHRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKE 184
           RKKG PWTEEEHR FL+GLKK+GKGDWR+I+RN V TRTPTQVASHAQKYF+RQ +G K+
Sbjct: 137 RKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIRQVNGGKD 196

Query: 185 RKRSSIHDITTVDNNSIPMPIDPNWISPAPNNPTIQSTMQQLSPTSHGQDQ 221
           ++RSSIHDITTV+     +P  P+  + A +N T  +     SP S G +Q
Sbjct: 197 KRRSSIHDITTVN-----IPDSPD--AAAADNATANA---PCSPPSVGGNQ 237

[Close]
BLAST of MELO3C019904 vs. TAIR10
Match: AT5G58900.1 (AT5G58900.1 Homeodomain-like transcriptional regulator)

HSP 1 Score: 184.5 bits (467), Expect = 7.5e-47
Identity = 96/177 (54.24%), Postives = 115/177 (64.97%), Query Frame = 1 

Query: 17  WTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYEALVHDVLEIDSGRVEL 76
           WT +E+K FE AL V   N PDRWQ+VA  +PGK+  +V   Y  L  DV  I++G + +
Sbjct: 34  WTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVSSIEAGLIPV 93

Query: 77  PSYAEESAVGLPEWDSSGQISFGSKAKHGGDN-----------ERKKGTPWTEEEHRLFL 136
           P Y       L +W   G    G K  H   N           ERKKG PWTEEEH+LFL
Sbjct: 94  PGYITSPPFTL-DWAGGGGGCNGFKPGHQVCNKRSQAGRSPELERKKGVPWTEEEHKLFL 153

Query: 137 LGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIHDITTVD 183
           +GLKK+GKGDWR+ISRN VITRTPTQVASHAQKYF+RQ SG K+++R+SIHDITTV+
Sbjct: 154 MGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITTVN 209

[Close]
BLAST of MELO3C019904 vs. TAIR10
Match: AT3G11280.1 (AT3G11280.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 183.0 bits (463), Expect = 2.2e-46
Identity = 91/171 (53.22%), Postives = 118/171 (69.01%), Query Frame = 1 

Query: 11  TQSSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYEALVHDVLEID 70
           + SS  WT+ E+K+FE AL +   + PDRW +VA  +PGK+  +V   Y  L  DV +I+
Sbjct: 27  SSSSGSWTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFDIE 86

Query: 71  SGRVELPSY-AEESAVGLPEWDSSGQISFGSKAKHGGDNERKKGTPWTEEEHRLFLLGLK 130
           +GRV +P Y A  S +G  + D   +   G++   G D +RKKG PWTEEEHR FLLGL 
Sbjct: 87  AGRVPIPGYPAASSPLGF-DTDMCRKRPSGAR---GSDQDRKKGVPWTEEEHRRFLLGLL 146

Query: 131 KFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIHDITT 181
           K+GKGDWR+ISRN V+++TPTQVASHAQKY+ RQ SG K+++R SIHDITT
Sbjct: 147 KYGKGDWRNISRNFVVSKTPTQVASHAQKYYQRQLSGAKDKRRPSIHDITT 193

[Close]
BLAST of MELO3C019904 vs. NCBI nr
Match: gi|659113502|ref|XP_008456608.1| (PREDICTED: transcription factor DIVARICATA [Cucumis melo])

HSP 1 Score: 486.1 bits (1250), Expect = 3.4e-134
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 1 

Query: 1   MFHDSRWTTMTQSSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYE 60
           MFHDSRWTTMTQSSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYE
Sbjct: 1   MFHDSRWTTMTQSSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYE 60

Query: 61  ALVHDVLEIDSGRVELPSYAEESAVGLPEWDSSGQISFGSKAKHGGDNERKKGTPWTEEE 120
           ALVHDVLEIDSGRVELPSYAEESAVGLPEWDSSGQISFGSKAKHGGDNERKKGTPWTEEE
Sbjct: 61  ALVHDVLEIDSGRVELPSYAEESAVGLPEWDSSGQISFGSKAKHGGDNERKKGTPWTEEE 120

Query: 121 HRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIHDITT 180
           HRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIHDITT
Sbjct: 121 HRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIHDITT 180

Query: 181 VDNNSIPMPIDPNWISPAPNNPTIQSTMQQLSPTSHGQDQGASLGFQNYRFPM 234
           VDNNSIPMPIDPNWISPAPNNPTIQSTMQQLSPTSHGQDQGASLGFQNYRFPM
Sbjct: 181 VDNNSIPMPIDPNWISPAPNNPTIQSTMQQLSPTSHGQDQGASLGFQNYRFPM 233

[Close]
BLAST of MELO3C019904 vs. NCBI nr
Match: gi|449446301|ref|XP_004140910.1| (PREDICTED: transcription factor DIVARICATA [Cucumis sativus])

HSP 1 Score: 479.9 bits (1234), Expect = 2.5e-132
Identity = 229/233 (98.28%), Postives = 232/233 (99.57%), Query Frame = 1 

Query: 1   MFHDSRWTTMTQSSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYE 60
           MFH +RWTTMTQSSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHY+
Sbjct: 1   MFHHTRWTTMTQSSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYD 60

Query: 61  ALVHDVLEIDSGRVELPSYAEESAVGLPEWDSSGQISFGSKAKHGGDNERKKGTPWTEEE 120
           ALVHDVLEIDSGRVELPSYA+ESAVGLPEWDSSGQISFGSKAKHGGDNERKKGTPWTEEE
Sbjct: 61  ALVHDVLEIDSGRVELPSYADESAVGLPEWDSSGQISFGSKAKHGGDNERKKGTPWTEEE 120

Query: 121 HRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIHDITT 180
           HRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIHDITT
Sbjct: 121 HRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIHDITT 180

Query: 181 VDNNSIPMPIDPNWISPAPNNPTIQSTMQQLSPTSHGQDQGASLGFQNYRFPM 234
           VDNNSIPMPIDPNWISPAPNNPTIQSTMQQLSPTSHGQDQGASLGFQNYRFPM
Sbjct: 181 VDNNSIPMPIDPNWISPAPNNPTIQSTMQQLSPTSHGQDQGASLGFQNYRFPM 233

[Close]
BLAST of MELO3C019904 vs. NCBI nr
Match: gi|922408375|ref|XP_013470249.1| (MYB-like transcription factor family protein [Medicago truncatula])

HSP 1 Score: 330.5 bits (846), Expect = 2.4e-87
Identity = 160/234 (68.38%), Postives = 191/234 (81.62%), Query Frame = 1 

Query: 5   SRWTTMTQSSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYEALVH 64
           +RW T     T WTR  DKLFE AL++VP +LPDRW+++A+ VPGKS  E++DHYEALVH
Sbjct: 15  TRWPTQP---TQWTRDHDKLFERALLMVPEDLPDRWEKIAEQVPGKSAAEIRDHYEALVH 74

Query: 65  DVLEIDSGRVELPSYAEESAV---GLPEWDSSGQISFGSKAKHGGDNERKKGTPWTEEEH 124
           D+LEIDSGRVE+PSY++ESAV   GL EWDSS QISFGSK +HGGDNERKKGTPWTEEEH
Sbjct: 75  DILEIDSGRVEVPSYSDESAVSGGGLAEWDSSNQISFGSKPRHGGDNERKKGTPWTEEEH 134

Query: 125 RLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIHDITTV 184
           RLFL+GL KFGKGDWRSISRNVV+TRTPTQVASHAQKYFLRQ S KKERKRSSIHDIT+V
Sbjct: 135 RLFLIGLTKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDITSV 194

Query: 185 DNNSIPMPIDPNWISPAPNNPTIQSTMQQLS--PTSHGQDQGASLGFQNYRFPM 234
           D+NS P+PID NW+ P P   ++Q    ++   P+++ QDQ ++ G+ NY F M
Sbjct: 195 DSNSAPVPIDQNWV-PPPGGGSMQQQSPEMHHYPSNNLQDQMSAYGYSNYGFQM 244

[Close]
BLAST of MELO3C019904 vs. NCBI nr
Match: gi|1009119689|ref|XP_015876516.1| (PREDICTED: transcription factor DIVARICATA [Ziziphus jujuba])

HSP 1 Score: 322.8 bits (826), Expect = 5.0e-85
Identity = 160/235 (68.09%), Postives = 185/235 (78.72%), Query Frame = 1 

Query: 1   MFHD-SRWTTMTQSSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHY 60
           M+ D S W  +  +ST WTR EDKLFE+ALV    +LPDRW+++A  +PG+SP +V +HY
Sbjct: 1   MYQDNSCWAMIQSASTRWTRYEDKLFEQALVRFSEDLPDRWEKIAQQLPGRSPSDVMEHY 60

Query: 61  EALVHDVLEIDSGRVELPSYAEESAVGLPEWDSSGQISFGSKAKH-GGDNERKKGTPWTE 120
           EALVHDV EIDSGRV+LPSYA++S  GL  WDS+ QISFGSK K  GG+ ERKKGTPWTE
Sbjct: 61  EALVHDVFEIDSGRVQLPSYADDS-FGLSRWDSASQISFGSKPKQQGGEPERKKGTPWTE 120

Query: 121 EEHRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIHDI 180
           EEHR FLLGL++FGKGDWRSISRNVVITRTPTQVASHAQKYFLRQ S KKERKRSSIHDI
Sbjct: 121 EEHRKFLLGLQQFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQNSVKKERKRSSIHDI 180

Query: 181 TTVDNNSIPMPIDPNWISPAPNNPTIQSTMQQLSPTSHGQDQGASLGFQNYRFPM 234
           T+ + NS+PM  D NWI P    P     +QQL PT H  DQGASLG+QN+ FPM
Sbjct: 181 TSAETNSVPMSADQNWIPPPGGQPL---PLQQLPPTGHMPDQGASLGYQNFSFPM 231

[Close]
BLAST of MELO3C019904 vs. NCBI nr
Match: gi|502120946|ref|XP_004497135.1| (PREDICTED: transcription factor DIVARICATA [Cicer arietinum])

HSP 1 Score: 319.3 bits (817), Expect = 5.5e-84
Identity = 157/234 (67.09%), Postives = 184/234 (78.63%), Query Frame = 1 

Query: 5   SRWTTMTQSSTHWTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYEALVH 64
           +RW       + WTR  DKLFE AL++VP +LPDRW+++A+ VPGKS  EV+DHYEALVH
Sbjct: 15  TRWPNQP---SQWTRDHDKLFERALLIVPEDLPDRWEKIAEQVPGKSAAEVRDHYEALVH 74

Query: 65  DVLEIDSGRVELPSYAEESAV-----GLPEWDSSGQISFGSKAKHGGDNERKKGTPWTEE 124
           DVLEIDSGRVE+PSY+++SA      GL +WDSS QISFGSK++H GDNERKKGTPWTEE
Sbjct: 75  DVLEIDSGRVEVPSYSDDSAASGGGGGLSDWDSSNQISFGSKSRH-GDNERKKGTPWTEE 134

Query: 125 EHRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQTSGKKERKRSSIHDIT 184
           EHRLFL+GL KFGKGDWRSISRNVV+TRTPTQVASHAQKYFLRQ S KKERKRSSIHDIT
Sbjct: 135 EHRLFLIGLSKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQNSVKKERKRSSIHDIT 194

Query: 185 TVDNNSIPMPIDPNWISPAPNNPTIQSTMQQLSPTSHGQDQGASLGFQNYRFPM 234
           +VD+NS PMPID NW+ P P     QS      P+++ QD   + G+ NY F M
Sbjct: 195 SVDSNSAPMPIDQNWV-PPPGGSIQQSQEMHNYPSNNLQDHMGTFGYSNYGFQM 243

The following BLAST results are available for this feature:
BLAST of MELO3C019904 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DIV_ANTMA9.5e-5250.00Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1[more]
MY1R1_SOLTU4.0e-2658.56Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1[more]
RADL3_ARATH1.1e-1253.73Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1[more]
RADL6_ARATH3.3e-1250.75Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1[more]
RADL4_ARATH7.4e-1250.72Protein RADIALIS-like 4 OS=Arabidopsis thaliana GN=RL4 PE=2 SV=1[more]
BLAST of MELO3C019904 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KE73_CUCSA1.7e-13298.28Syringolide-induced protein 1-3-1B OS=Cucumis sativus GN=Csa_6G046240 PE=4 SV=1[more]
G7ZYT0_MEDTR1.7e-8768.38DnaJ homolog subfamily C member OS=Medicago truncatula GN=MTR_1g111830 PE=4 SV=1[more]
V7BAF7_PHAVU6.6e-8465.70Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G023600g PE=4 SV=1[more]
M5WIS8_PRUPE3.3e-8368.42Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010926mg PE=4 SV=1[more]
Q8S8Z9_SOYBN4.3e-8365.00Syringolide-induced protein 1-3-1B OS=Glycine max GN=1-3-1B PE=2 SV=1[more]
BLAST of MELO3C019904 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G04760.13.5e-6862.04 Duplicated homeodomain-like superfamily protein[more]
AT5G08520.16.8e-4851.31 Duplicated homeodomain-like superfamily protein[more]
AT2G38090.11.5e-4745.45 Duplicated homeodomain-like superfamily protein[more]
AT5G58900.17.5e-4754.24 Homeodomain-like transcriptional regulator[more]
AT3G11280.12.2e-4653.22 Duplicated homeodomain-like superfamily protein[more]
BLAST of MELO3C019904 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659113502|ref|XP_008456608.1|3.4e-134100.00PREDICTED: transcription factor DIVARICATA [Cucumis melo][more]
gi|449446301|ref|XP_004140910.1|2.5e-13298.28PREDICTED: transcription factor DIVARICATA [Cucumis sativus][more]
gi|922408375|ref|XP_013470249.1|2.4e-8768.38MYB-like transcription factor family protein [Medicago truncatula][more]
gi|1009119689|ref|XP_015876516.1|5.0e-8568.09PREDICTED: transcription factor DIVARICATA [Ziziphus jujuba][more]
gi|502120946|ref|XP_004497135.1|5.5e-8467.09PREDICTED: transcription factor DIVARICATA [Cicer arietinum][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR006447Myb_dom_plants
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0000785 chromatin
molecular_function GO:0003677 DNA binding
molecular_function GO:0003682 chromatin binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU54720melon EST collection version 4.0transcribed_cluster
MU60684melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019904T1MELO3C019904T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU54720MU54720transcribed_cluster
MU60684MU60684transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 16..60
score: 1.3E-7coord: 115..159
score: 1.0
IPR001005SANT/Myb domainSMARTSM00717santcoord: 112..162
score: 1.6E-12coord: 13..65
score: 2.
IPR006447Myb domain, plantsTIGRFAMsTIGR01557TIGR01557coord: 111..163
score: 1.6
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 112..158
score: 1.7E-11coord: 15..62
score: 7.
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 9..64
score: 5.96E-12coord: 110..164
score: 1.15
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 108..164
score: 20.748coord: 9..67
score: 9
NoneNo IPR availablePANTHERPTHR24078DNAJ HOMOLOG SUBFAMILY C MEMBERcoord: 12..192
score: 7.9
NoneNo IPR availablePANTHERPTHR24078:SF279DUPLICATED SANT DNA-BINDING DOMAIN-CONTAINING PROTEINcoord: 12..192
score: 7.9