Cp4.1LG01g25070 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g25070
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionTranscription factor
LocationCp4.1LG01 : 18561715 .. 18563821 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGTTATGTTTCACGACAGTCGGTGGACGACCATGACTCAGTCTTCGACTCAGTGGACTCGGTCGGAGGACAAGCTTTTCGAGGAGGCTTTGGTGGTGGTACCGGCGGACTTGCCTGATCGGTGGCAAAGGGTCGCCGACCTTGTGCCTGGAAAGTTGCCGAGGGAGGTTAAAGATCACTATGAGGCTCTGGTTTATGACGTCCTGGAAATTGACTCTGGTCGAGTTGAGTTGCCGAGTTATTCTGATGAATCGGCGGTGGGTTCGCCGGAATGGGACTCTTCTGGACAGATCTCTTTTGGATCCAAGGCTAAGCCTGGTGGGGACAGCGAGAGGAAGAAGGGGACGCCATGGACCNTTGTGTTGTACTTGTGATTAAAATTTTATTTCTATTAATATGTTTCCCTCTCTTAATCCTCAATTTAGTCCTCTGTGTTTCTGTTTGGCTGCTGAGAAAATGGTGGAAAAGGGAAAGGAAAGTGGCGAGAAAATTTTCGTGTCTGTTGGGTTTTGTGTCTTAATTCCTGTTCTATCTTCCAAATTGGGAATTCCAGAAACAGAGAACCAACCCAGTTTCGGATTTAGACGTGCTTTTTCTTGTATAAAGTTTTAACTAAGATGGTTATCTAAGCAATGGAAGCTCTCAAGGAAACTATGGCTTATATGGAATGACAAATCTTTACAAGTTGTAAGCCATTTGGGTTCTCTATTGGAAGAACAAGACTTCCCCATGAACAAGAATCAGGTGGCTGTCTGGGGATTTCTAGTCATTAACAAGGAAAACCATCTGTCAGAATTGTGTTCTTTCAGAGTATATAAGAGCGCAAGCCCACCGCTTGCAGATATTGTTCTCCTTCGGCTTTTCTTTGCGAGTTCTCCCTCAAGATTTTTAAAACGTGTCTGCTATGAGAGGTTTTCCACACCCTTATAACGAATGTTTCGTTCTCCTCCCCAACCGATGTAGGGTCTCACAGTCCACCCCTTCAGGGAGAGGCTCGAACTTTAGACCTTAGGATCACTCTATAAGCTATGGGACCTACGCGCTAACCAACTACGTCACCTATGGAAACCTCTCCCTAATAGACACGTTTTAAAAACTTTGAGAAGAAGCTCAAAAAAACAATATCTGCTAATGGTGGGCTTGGTGTACTTGTTTTTTTCATCATGCTTAGTTTTCAAAACTCAAATGGTTATCGAACAAAGCCTTTATTTTCTTGACGGAGAACATGACGCTTGGGACTATTGATCTGTCATAAGTGTCTAAGCTAGCTTTTTCAACAACCAGTTAAGCTTGTGACATTGACATTCATAAACTTTATTAGGTCGCTAGATGACAACTGGGTTCATGATTTGCCTCTTTAACCAATGAGCTGACTCATCTTGGCCATGTTTGGGCTAATGGCTGAGAAGAATGTTGCTGTCTATTTGCATATTACTTTGTTAACAACTTATTATTGATATTAGCTTCAATATCAAGTTTTTGAGCATTGGCCTAAAAGCTAAATCCAATAGTTGCTCTAGTTTTCAACTTTTGCCCCCTATGTTTCGAGATCTGTTGCTGCGATTGGTTCATATATATACGTAAAATCAGAGTTCTTTACTTTCTAAGTTTTCTTATGGCTGTGTTTTTAGAAGTGTAATGTAGAAGCTTGAATTTCGGAGACCAATGGGAGAAACGAAGCAGCGAGTATCAAACGATGTTCATGTTACTCTAGGCCTTTCTCGCTCTTTGGTTAGTCTTCTGATGCAAAGTTATGTTTGGCATTATGACAGGCTATTCCTCCTTGGACTGAAAAAATTCGGTAAGGGTGATTGGAGGAGCATCTCAAGGAACGTAGTGATCACAAGAACACCAACTCAAGTAGCTAGCCATGCTCAGAAATACTTTCTCCGACAAAACTCCGGGAAGAAAGAAAGGAAACGATCAAGCATTCACGACATCACTACAGTTGACAACAACTCCGCCCCTATACCTTTCGACCCGAATTGGATATCCCCAGTTCCCAACCCAACCATTCAATCAAGTATGCAGCAGCAGCTAAGCCCCACAGGTCATTTGCAAGACCAAGGAGGTGCACTCCAAACTTACAGGTTCCCGATGTAG

mRNA sequence

ATGGTTTGGACTCGGTCGGAGGACAAGCTTTTCGAGGAGGCTTTGGTGGTGGTACCGGCGGACTTGCCTGATCGGTGGCAAAGGGTCGCCGACCTTGTGCCTGGAAAGTTGCCGAGGGAGGTTAAAGATCACTATGAGGCTCTGGTTTATGACGTCCTGGAAATTGACTCTGGTCGAGTTGAGTTGCCGAGTTATTCTGATGAATCGGCGGTGGGTTCGCCGGAATGGGACTCTTCTGGACAGATCTCTTTTGGATCCAAGGCTAAGCCTGGTGGGGACAGCGAGAGGAAGAAGGGGACGCCATGGACCNTTAAGCTTGAATTTCGGAGACCAATGGGAGAAACGAAGCAGCGAGTATCAAACGATGTTCATGTTACTCTAGGCCTTTCTCGCTCTTTGGTTAGTCTTCTGATGCAAAGTTATGTTTGGCATTATGACAGGCTATTCCTCCTTGGACTGAAAAAATTCGGTAAGGGTGATTGGAGGAGCATCTCAAGGAACGTAGTGATCACAAGAACACCAACTCAAGTAGCTAGCCATGCTCAGAAATACTTTCTCCGACAAAACTCCGGGAAGAAAGAAAGGAAACGATCAAGCATTCACGACATCACTACAGTTGACAACAACTCCGCCCCTATACCTTTCGACCCGAATTGGATATCCCCAGTTCCCAACCCAACCATTCAATCAAGTATGCAGCAGCAGCTAAGCCCCACAGGTCATTTGCAAGACCAAGGAGGTGCACTCCAAACTTACAGGTTCCCGATGTAG

Coding sequence (CDS)

ATGGTTTGGACTCGGTCGGAGGACAAGCTTTTCGAGGAGGCTTTGGTGGTGGTACCGGCGGACTTGCCTGATCGGTGGCAAAGGGTCGCCGACCTTGTGCCTGGAAAGTTGCCGAGGGAGGTTAAAGATCACTATGAGGCTCTGGTTTATGACGTCCTGGAAATTGACTCTGGTCGAGTTGAGTTGCCGAGTTATTCTGATGAATCGGCGGTGGGTTCGCCGGAATGGGACTCTTCTGGACAGATCTCTTTTGGATCCAAGGCTAAGCCTGGTGGGGACAGCGAGAGGAAGAAGGGGACGCCATGGACCNTTAAGCTTGAATTTCGGAGACCAATGGGAGAAACGAAGCAGCGAGTATCAAACGATGTTCATGTTACTCTAGGCCTTTCTCGCTCTTTGGTTAGTCTTCTGATGCAAAGTTATGTTTGGCATTATGACAGGCTATTCCTCCTTGGACTGAAAAAATTCGGTAAGGGTGATTGGAGGAGCATCTCAAGGAACGTAGTGATCACAAGAACACCAACTCAAGTAGCTAGCCATGCTCAGAAATACTTTCTCCGACAAAACTCCGGGAAGAAAGAAAGGAAACGATCAAGCATTCACGACATCACTACAGTTGACAACAACTCCGCCCCTATACCTTTCGACCCGAATTGGATATCCCCAGTTCCCAACCCAACCATTCAATCAAGTATGCAGCAGCAGCTAAGCCCCACAGGTCATTTGCAAGACCAAGGAGGTGCACTCCAAACTTACAGGTTCCCGATGTAG

Protein sequence

MVWTRSEDKLFEEALVVVPADLPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGRVELPSYSDESAVGSPEWDSSGQISFGSKAKPGGDSERKKGTPWTXKLEFRRPMGETKQRVSNDVHVTLGLSRSLVSLLMQSYVWHYDRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQNSGKKERKRSSIHDITTVDNNSAPIPFDPNWISPVPNPTIQSSMQQQLSPTGHLQDQGGALQTYRFPM
Homology
[Close]
BLAST of Cp4.1LG01g25070 vs. Swiss-Prot
Match: DIV_ANTMA (Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 5.2e-35
Identity = 96/237 (40.51%), Postives = 126/237 (53.16%), Query Frame = 1 

Query: 3   WTRSEDKLFEEALVVVPADLPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGRVEL 62
           WT +E+K FE AL V   + P+RW+RVA+ VPGK   +V   Y+ L  DV  I++G V +
Sbjct: 26  WTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVSSIEAGFVPV 85

Query: 63  PSYSDESAVGSPEWDSSGQISFGSKAKPGGDSERKKGTPWTXKLEFRRPMGETKQRVSND 122
           P YS  S   + EW S        ++   G  +   G P   + +   P  E + +    
Sbjct: 86  PGYSTSSPF-TLEWGSGHGFDGFKQSYGTGGRKSSSGRPSEQERKKGVPWTEEEHK---- 145

Query: 123 VHVTLGLSRSLVSLLMQSYVWHYDRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQ 182
                                    LFL+GLKK+GKGDWR+ISRN VITRTPTQVASHAQ
Sbjct: 146 -------------------------LFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQ 205

Query: 183 KYFLRQNSGKKERKRSSIHDITTVDNNSAPIPFDPNWISPVPNPTIQSSMQQQLSPT 240
           KYF+RQ SG K+++R+SIHDITTV+ +    P   N     P+    S  QQQ S T
Sbjct: 206 KYFIRQLSGGKDKRRASIHDITTVNLSDNQTPSPDN--KKPPSSPDHSMAQQQTSST 230

[Close]
BLAST of Cp4.1LG01g25070 vs. Swiss-Prot
Match: MY1R1_SOLTU (Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.9e-17
Identity = 45/67 (67.16%), Postives = 54/67 (80.60%), Query Frame = 1 

Query: 147 RLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQKYFLRQNSGKKERKRSSIHDITTV 206
           +LFLLGL+K GKGDWR ISRN V TRTPTQVASHAQKYFLR+++  + R+RSS+ DITT 
Sbjct: 103 KLFLLGLQKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTD 162

Query: 207 DNNSAPI 214
             +  PI
Sbjct: 163 SVSVMPI 169

[Close]
BLAST of Cp4.1LG01g25070 vs. Swiss-Prot
Match: RADL6_ARATH (Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-12
Identity = 34/63 (53.97%), Postives = 43/63 (68.25%), Query Frame = 1 

Query: 3  WTRSEDKLFEEALVVVPADLPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGRVEL 62
          WT S++K+FE AL V   D PDRW  VA  V GK   EVK HY+ LV D++ I++GRV L
Sbjct: 12 WTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRVPL 71

Query: 63 PSY 66
          P+Y
Sbjct: 72 PNY 74

[Close]
BLAST of Cp4.1LG01g25070 vs. Swiss-Prot
Match: RAD_ANTMA (Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.7e-12
Identity = 33/63 (52.38%), Postives = 40/63 (63.49%), Query Frame = 1 

Query: 3  WTRSEDKLFEEALVVVPADLPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGRVEL 62
          W+  E+K FE AL V   D PDRW  VA  V G+ P EVK HYE LV D+  I+SG+V  
Sbjct: 11 WSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIESGKVPF 70

Query: 63 PSY 66
          P+Y
Sbjct: 71 PNY 73

[Close]
BLAST of Cp4.1LG01g25070 vs. Swiss-Prot
Match: RADL3_ARATH (Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.2e-12
Identity = 34/63 (53.97%), Postives = 40/63 (63.49%), Query Frame = 1 

Query: 3  WTRSEDKLFEEALVVVPADLPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGRVEL 62
          WTR E+KLFE AL     D PDRW  VA  V GK   EV+ HYE L+ DV +I+SGR   
Sbjct: 12 WTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDIESGRYPH 71

Query: 63 PSY 66
          P+Y
Sbjct: 72 PNY 74

[Close]
BLAST of Cp4.1LG01g25070 vs. TrEMBL
Match: A0A0A0KE73_CUCSA (Syringolide-induced protein 1-3-1B OS=Cucumis sativus GN=Csa_6G046240 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.9e-69
Identity = 157/257 (61.09%), Postives = 171/257 (66.54%), Query Frame = 1 

Query: 3   WTRSEDKLFEEALVVVPADLPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGRVEL 62
           WTRSEDKLFEEALVVVPA+LPDRWQRVAD VPGK PREVKDHY+ALV+DVLEIDSGRVE 
Sbjct: 17  WTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYDALVHDVLEIDSGRVE- 76

Query: 63  PSYSDESAVGSPEWDSSGQISFGSKAKPGGDSERKKGTPWTXKLEFRRPMGETKQRVSND 122
                      P +     +        G  S   K           +  G+ +++    
Sbjct: 77  ----------LPSYADESAVGLPEWDSSGQISFGSKA----------KHGGDNERKKGTP 136

Query: 123 VHVTLGLSRSLVSLLMQSYVWHYDRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQ 182
                             +     RLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQ
Sbjct: 137 ------------------WTEEEHRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQ 196

Query: 183 KYFLRQNSGKKERKRSSIHDITTVDNNSAPIPFDPNWISPVP-NPTIQSSMQQQLSPTGH 242
           KYFLRQ SGKKERKRSSIHDITTVDNNS P+P DPNWISP P NPTIQS+M QQLSPT H
Sbjct: 197 KYFLRQTSGKKERKRSSIHDITTVDNNSIPMPIDPNWISPAPNNPTIQSTM-QQLSPTSH 233

Query: 243 LQDQGGAL--QTYRFPM 257
            QDQG +L  Q YRFPM
Sbjct: 257 GQDQGASLGFQNYRFPM 233

[Close]
BLAST of Cp4.1LG01g25070 vs. TrEMBL
Match: A0A0L9U1R5_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g250900 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.0e-62
Identity = 140/264 (53.03%), Postives = 165/264 (62.50%), Query Frame = 1 

Query: 3   WTRSEDKLFEEALVVVPADLPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGRVEL 62
           WTR  DKLFE AL++VP DLPDRW ++A  VPGK P EV++HY+ALV+DV EIDSGRVE+
Sbjct: 20  WTRYHDKLFERALLLVPEDLPDRWNQIAVHVPGKTPAEVREHYDALVHDVFEIDSGRVEV 79

Query: 63  PSYSDESA-------VGSPEWDSSGQISFGSKAKPGGDSERKKGTPWTXKLEFRRPMGET 122
           PSY D+ A        G+  WDS+ QISFGSK K                       GET
Sbjct: 80  PSYVDDLAPPQLSGGAGNSAWDSANQISFGSKPK----------------------QGET 139

Query: 123 KQRVSNDVHVTLGLSRSLVSLLMQSYVWHYDRLFLLGLKKFGKGDWRSISRNVVITRTPT 182
           +++                      +     RLFL+GL KFGKGDWRSISRNVV+TRTPT
Sbjct: 140 ERKKGTP------------------WTEEEHRLFLIGLSKFGKGDWRSISRNVVVTRTPT 199

Query: 183 QVASHAQKYFLRQNSGKKERKRSSIHDITTVDNNSAPIPFDPNWISPVPNPTIQSSMQQQ 242
           QVASHAQKYFLRQNSGKKERKRSSIHDITTVD+NS P+P D NW+ P P  ++Q S Q  
Sbjct: 200 QVASHAQKYFLRQNSGKKERKRSSIHDITTVDSNSLPVPIDQNWVPP-PGTSMQQSSQDM 242

Query: 243 LS-PTGHLQDQGG--ALQTYRFPM 257
           LS  +  +QDQ G      Y F M
Sbjct: 260 LSYASSSMQDQMGPFGYSNYGFEM 242

[Close]
BLAST of Cp4.1LG01g25070 vs. TrEMBL
Match: A0A0S3SLK8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G025600 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.0e-62
Identity = 140/264 (53.03%), Postives = 165/264 (62.50%), Query Frame = 1 

Query: 3   WTRSEDKLFEEALVVVPADLPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGRVEL 62
           WTR  DKLFE AL++VP DLPDRW ++A  VPGK P EV++HY+ALV+DV EIDSGRVE+
Sbjct: 20  WTRYHDKLFERALLLVPEDLPDRWNQIAVHVPGKTPAEVREHYDALVHDVFEIDSGRVEV 79

Query: 63  PSYSDESA-------VGSPEWDSSGQISFGSKAKPGGDSERKKGTPWTXKLEFRRPMGET 122
           PSY D+ A        G+  WDS+ QISFGSK K                       GET
Sbjct: 80  PSYVDDLAPPQLSGGAGNSAWDSANQISFGSKPK----------------------QGET 139

Query: 123 KQRVSNDVHVTLGLSRSLVSLLMQSYVWHYDRLFLLGLKKFGKGDWRSISRNVVITRTPT 182
           +++                      +     RLFL+GL KFGKGDWRSISRNVV+TRTPT
Sbjct: 140 ERKKGTP------------------WTEEEHRLFLIGLSKFGKGDWRSISRNVVVTRTPT 199

Query: 183 QVASHAQKYFLRQNSGKKERKRSSIHDITTVDNNSAPIPFDPNWISPVPNPTIQSSMQQQ 242
           QVASHAQKYFLRQNSGKKERKRSSIHDITTVD+NS P+P D NW+ P P  ++Q S Q  
Sbjct: 200 QVASHAQKYFLRQNSGKKERKRSSIHDITTVDSNSLPVPIDQNWVPP-PGTSMQQSSQDM 242

Query: 243 LS-PTGHLQDQGG--ALQTYRFPM 257
           LS  +  +QDQ G      Y F M
Sbjct: 260 LSYASSSMQDQMGPFGYSNYGFEM 242

[Close]
BLAST of Cp4.1LG01g25070 vs. TrEMBL
Match: A0A061GZK5_THECC (Duplicated homeodomain-like superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_041160 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 5.0e-61
Identity = 132/256 (51.56%), Postives = 165/256 (64.45%), Query Frame = 1 

Query: 3   WTRSEDKLFEEALVVVPADLPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGRVEL 62
           WTR EDKLFE+ALV++P  +PDRWQ++A+ VPGK  +EVK+HYE L+YDV EID+GR+E+
Sbjct: 28  WTRLEDKLFEQALVMLPEGIPDRWQKIAERVPGKSAKEVKEHYEMLLYDVYEIDAGRIEI 87

Query: 63  PSYSDESAVGSPEWDSSGQISFGSKAKPGGDSERKKGTPWTXKLEFRRPMGETKQRVSND 122
           PSY+D+S++ S  WDS  QISF          E  K           +  GE +++    
Sbjct: 88  PSYADDSSLLSSSWDSDTQISF----------EASKP----------KQHGENERKKGTP 147

Query: 123 VHVTLGLSRSLVSLLMQSYVWHYDRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQ 182
                             +     +LFL+GL KFGKGDWRSISRNVV+TRTPTQVASHAQ
Sbjct: 148 ------------------WTEEEHKLFLIGLHKFGKGDWRSISRNVVVTRTPTQVASHAQ 207

Query: 183 KYFLRQNSGKKERKRSSIHDITTVDNNSAPIPFDPNWISPVPNPTIQSSMQQQLSPTGHL 242
           KYFLRQ+S KKERKRSSIHDITTVD+N+   P D NWI  +  P  Q  ++ QL P  HL
Sbjct: 208 KYFLRQSSVKKERKRSSIHDITTVDSNTMDAPVDQNWIPVLGGPVQQVPVRHQLPPGSHL 245

Query: 243 QDQGGAL--QTYRFPM 257
             QGG+L  Q Y +PM
Sbjct: 268 PAQGGSLGYQNYSYPM 245

[Close]
BLAST of Cp4.1LG01g25070 vs. TrEMBL
Match: A0A151TQ52_CAJCA (Myb-like protein J OS=Cajanus cajan GN=KK1_008325 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 6.4e-56
Identity = 126/256 (49.22%), Postives = 151/256 (58.98%), Query Frame = 1 

Query: 3   WTRSEDKLFEEALVVVPADLPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGRVEL 62
           WTR  DKLFE AL+ VP D+PDRWQ++AD VPGK   EV+DHY+ALV+DV EIDSGRVE+
Sbjct: 17  WTRFHDKLFERALLAVPEDMPDRWQKIADQVPGKSAAEVRDHYDALVHDVFEIDSGRVEV 76

Query: 63  PSYSDESAVGSPEWDSSGQISFGSKAKPGGDSERKKGTPWTXKLEFRRPMGETKQRVSND 122
           PSY D         DS  +    +      DS  +           +   G+ +++    
Sbjct: 77  PSYVD---------DSPPRAPTAAAGTSSWDSANQ------ISFGSKPKQGDNERKKGTP 136

Query: 123 VHVTLGLSRSLVSLLMQSYVWHYDRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQ 182
                             +     RLFL+GL KFGKGDWRSISRNVV+TRTPTQVASHAQ
Sbjct: 137 ------------------WTEEEHRLFLIGLSKFGKGDWRSISRNVVVTRTPTQVASHAQ 196

Query: 183 KYFLRQNSGKKERKRSSIHDITTVDNNSAPIPFDPNWISPVPNPTIQSSMQQQLSPTGHL 242
           KYFLRQNS KKERKRSSIHDITTVD+NS P+P D NW+ P    ++Q     Q  P  +L
Sbjct: 197 KYFLRQNSVKKERKRSSIHDITTVDSNSVPVPIDQNWVPPPGTASVQQPQDMQQYPPSNL 239

Query: 243 QDQGG--ALQTYRFPM 257
            DQ G      Y F M
Sbjct: 257 HDQMGQFGYSNYGFQM 239

[Close]
BLAST of Cp4.1LG01g25070 vs. TAIR10
Match: AT5G04760.1 (AT5G04760.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 191.8 bits (486), Expect = 5.1e-49
Identity = 119/251 (47.41%), Postives = 149/251 (59.36%), Query Frame = 1 

Query: 3   WTRSEDKLFEEALVVVPADLPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGRVEL 62
           WTRSEDK+FE+ALV+ P   P+RW+R+AD +  K   EV++HYE LV+DV EIDSGRV++
Sbjct: 6   WTRSEDKMFEQALVLFPEGSPNRWERIADQLH-KSAGEVREHYEVLVHDVFEIDSGRVDV 65

Query: 63  PSYSDESAVGSPEWDSSGQISFGSKAKPGGDSERKKGTPWTXKLEFRRPMGETKQRVSND 122
           P Y D+SA                 A  G DS          ++ F    GE++++    
Sbjct: 66  PDYMDDSAA----------------AAAGWDS--------AGQISFGSKHGESERKRGTP 125

Query: 123 VHVTLGLSRSLVSLLMQSYVWHYDRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQ 182
                             +  +  +LFL+GLK++GKGDWRSISRNVV+TRTPTQVASHAQ
Sbjct: 126 ------------------WTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQ 185

Query: 183 KYFLRQNSGKKERKRSSIHDITTVDNNSAPIPFDPNWI----SPVPNP---TIQSSMQQQ 242
           KYFLRQNS KKERKRSSIHDITTVD   A    + +W     SPV  P    I S   QQ
Sbjct: 186 KYFLRQNSVKKERKRSSIHDITTVDATLAMPGSNMDWTGQHGSPVQAPQQQQIMSEFGQQ 212

Query: 243 LSPTGHLQDQG 247
           L+P GH +D G
Sbjct: 246 LNP-GHFEDFG 212

[Close]
BLAST of Cp4.1LG01g25070 vs. TAIR10
Match: AT5G08520.1 (AT5G08520.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 158.7 bits (400), Expect = 4.8e-39
Identity = 99/218 (45.41%), Postives = 124/218 (56.88%), Query Frame = 1 

Query: 2   VWTRSEDKLFEEALVVVPADLPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGRVE 61
           VW+R +D  FE AL     +  +RW+++A  VPGK   ++K+HYE LV DV  I+SG V 
Sbjct: 11  VWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVTRIESGCVP 70

Query: 62  LPSYSDESAVGSPEWDSSGQISFGSKAKPGGDSERKKGTPWTXKLEFRRPMGETKQRVSN 121
           LP+Y      GSPE  +      G+ +K GG+S                  GE+ Q    
Sbjct: 71  LPAY------GSPEGSNGHAGDEGASSKKGGNSHA----------------GESNQA--- 130

Query: 122 DVHVTLGLSRSLVSLLMQSYVWHYD--RLFLLGLKKFGKGDWRSISRNVVITRTPTQVAS 181
                 G S+S      +   W  D  RLFLLGL K+GKGDWRSISRN V+TRTPTQVAS
Sbjct: 131 ------GKSKSDQER-RKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVAS 190

Query: 182 HAQKYFLRQNSGKKERKRSSIHDITTVDNNSAPIPFDP 218
           HAQKYF+R NS  K+R+RSSIHDIT+V N     P  P
Sbjct: 191 HAQKYFIRLNSMNKDRRRSSIHDITSVGNADVSTPQGP 196

[Close]
BLAST of Cp4.1LG01g25070 vs. TAIR10
Match: AT1G49010.1 (AT1G49010.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-34
Identity = 92/242 (38.02%), Postives = 124/242 (51.24%), Query Frame = 1 

Query: 3   WTRSEDKLFEEALVVVPAD---LPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGR 62
           W+R E+K FE A+ +   +     D+W +++ +VP K   EVK HY+ L+ DV  I++G+
Sbjct: 8   WSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVKAIENGQ 67

Query: 63  VELPSYSDESAVGSPEWDSSGQISFGSKAKPGGDSERKKGTPWTXKLEFRRPMGETKQRV 122
           V LP Y     +   E  ++        +   G SE KK  P T  +           R 
Sbjct: 68  VPLPRYHHRKGLIVDEAAAAATSPANRDSHSSGSSE-KKPNPGTSGISSSNGGRSGGSRA 127

Query: 123 SNDVHVTLGLSRSLVSLLMQSYVWHYDRLFLLGLKKFGKGDWRSISRNVVITRTPTQVAS 182
             +    +             +     RLFLLGL KFGKGDWRSISRN VI+RTPTQVAS
Sbjct: 128 EQERRKGI------------PWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVAS 187

Query: 183 HAQKYFLRQNSGKKERKRSSIHDITTVDNNSAPIPFDPNWISPVPNPTIQSSMQQQLSPT 242
           HAQKYF+R NS  ++R+RSSIHDITTV+N +  +         V +   Q   Q Q  P 
Sbjct: 188 HAQKYFIRLNSMNRDRRRSSIHDITTVNNQAPAVTGGGQQPQVVKHRPAQPQPQPQPQPQ 236

[Close]
BLAST of Cp4.1LG01g25070 vs. TAIR10
Match: AT5G58900.1 (AT5G58900.1 Homeodomain-like transcriptional regulator)

HSP 1 Score: 141.7 bits (356), Expect = 6.1e-34
Identity = 89/205 (43.41%), Postives = 115/205 (56.10%), Query Frame = 1 

Query: 3   WTRSEDKLFEEALVVVPADLPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGRVEL 62
           WT +E+K FE AL V   + PDRWQ+VA ++PGK   +V   Y  L  DV  I++G + +
Sbjct: 34  WTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVSSIEAGLIPV 93

Query: 63  PSYSDESAVGSPEWDSSGQISFGSKAKPGGDSERKKGTPWTXKLEFRRPMGETKQRVSND 122
           P Y   S   + +W   G    G K  PG     K+          R P  E K+ V   
Sbjct: 94  PGYIT-SPPFTLDWAGGGGGCNGFK--PGHQVCNKRSQAG------RSPELERKKGVP-- 153

Query: 123 VHVTLGLSRSLVSLLMQSYVWHYDRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQ 182
                             +     +LFL+GLKK+GKGDWR+ISRN VITRTPTQVASHAQ
Sbjct: 154 ------------------WTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQ 209

Query: 183 KYFLRQNSGKKERKRSSIHDITTVD 208
           KYF+RQ SG K+++R+SIHDITTV+
Sbjct: 214 KYFIRQLSGGKDKRRASIHDITTVN 209

[Close]
BLAST of Cp4.1LG01g25070 vs. TAIR10
Match: AT5G01200.1 (AT5G01200.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 135.2 bits (339), Expect = 5.7e-32
Identity = 92/255 (36.08%), Postives = 130/255 (50.98%), Query Frame = 1 

Query: 3   WTRSEDKLFEEALVVVP-ADLPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGRVE 62
           WT  E+K FE+AL  +   D  + W ++ADL+PGK   +V   Y+ L  DV +I++G + 
Sbjct: 30  WTAEENKRFEKALAYLDDKDNLESWSKIADLIPGKTVADVIKRYKELEDDVSDIEAGLIP 89

Query: 63  LPSYSDE--SAVGSPEWDSSGQISFGSKAKPGGDSERKKGTPWTXKLEFRRPMGETKQRV 122
           +P Y  +  SA  S  +      S+G     GG    K+ +P      FR PM E +++ 
Sbjct: 90  IPGYGGDASSAANSDYFFGLENSSYGYDYVVGG----KRSSPAMTDC-FRSPMPEKERK- 149

Query: 123 SNDVHVTLGLSRSLVSLLMQSYVWHYDR--LFLLGLKKFGKGDWRSISRNVVITRTPTQV 182
                              +   W  D    FL+GLKK+GKGDWR+I+++ V TRTPTQV
Sbjct: 150 -------------------KGVPWTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQV 209

Query: 183 ASHAQKYFLRQNSGKKERKRSSIHDITTVDNNSAPIPFDPNWISPVPNPTIQSSMQQQLS 242
           ASHAQKYFLRQ +  K+++RSSIHDITTV+   A             +PT  +S    L 
Sbjct: 210 ASHAQKYFLRQLTDGKDKRRSSIHDITTVNIPDADASATATTADVALSPTPANSFDVFLQ 259

Query: 243 PTGHLQDQGGALQTY 253
           P  H      +  +Y
Sbjct: 270 PNPHYSFASASASSY 259

[Close]
BLAST of Cp4.1LG01g25070 vs. NCBI nr
Match: gi|659113502|ref|XP_008456608.1| (PREDICTED: transcription factor DIVARICATA [Cucumis melo])

HSP 1 Score: 271.2 bits (692), Expect = 1.9e-69
Identity = 158/257 (61.48%), Postives = 171/257 (66.54%), Query Frame = 1 

Query: 3   WTRSEDKLFEEALVVVPADLPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGRVEL 62
           WTRSEDKLFEEALVVVPA+LPDRWQRVAD VPGK PREVKDHYEALV+DVLEIDSGRVE 
Sbjct: 17  WTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYEALVHDVLEIDSGRVE- 76

Query: 63  PSYSDESAVGSPEWDSSGQISFGSKAKPGGDSERKKGTPWTXKLEFRRPMGETKQRVSND 122
                      P +     +        G  S   K           +  G+ +++    
Sbjct: 77  ----------LPSYAEESAVGLPEWDSSGQISFGSKA----------KHGGDNERKKGTP 136

Query: 123 VHVTLGLSRSLVSLLMQSYVWHYDRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQ 182
                             +     RLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQ
Sbjct: 137 ------------------WTEEEHRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQ 196

Query: 183 KYFLRQNSGKKERKRSSIHDITTVDNNSAPIPFDPNWISPVP-NPTIQSSMQQQLSPTGH 242
           KYFLRQ SGKKERKRSSIHDITTVDNNS P+P DPNWISP P NPTIQS+M QQLSPT H
Sbjct: 197 KYFLRQTSGKKERKRSSIHDITTVDNNSIPMPIDPNWISPAPNNPTIQSTM-QQLSPTSH 233

Query: 243 LQDQGGAL--QTYRFPM 257
            QDQG +L  Q YRFPM
Sbjct: 257 GQDQGASLGFQNYRFPM 233

[Close]
BLAST of Cp4.1LG01g25070 vs. NCBI nr
Match: gi|449446301|ref|XP_004140910.1| (PREDICTED: transcription factor DIVARICATA [Cucumis sativus])

HSP 1 Score: 270.0 bits (689), Expect = 4.2e-69
Identity = 157/257 (61.09%), Postives = 171/257 (66.54%), Query Frame = 1 

Query: 3   WTRSEDKLFEEALVVVPADLPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGRVEL 62
           WTRSEDKLFEEALVVVPA+LPDRWQRVAD VPGK PREVKDHY+ALV+DVLEIDSGRVE 
Sbjct: 17  WTRSEDKLFEEALVVVPANLPDRWQRVADHVPGKSPREVKDHYDALVHDVLEIDSGRVE- 76

Query: 63  PSYSDESAVGSPEWDSSGQISFGSKAKPGGDSERKKGTPWTXKLEFRRPMGETKQRVSND 122
                      P +     +        G  S   K           +  G+ +++    
Sbjct: 77  ----------LPSYADESAVGLPEWDSSGQISFGSKA----------KHGGDNERKKGTP 136

Query: 123 VHVTLGLSRSLVSLLMQSYVWHYDRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQ 182
                             +     RLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQ
Sbjct: 137 ------------------WTEEEHRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQ 196

Query: 183 KYFLRQNSGKKERKRSSIHDITTVDNNSAPIPFDPNWISPVP-NPTIQSSMQQQLSPTGH 242
           KYFLRQ SGKKERKRSSIHDITTVDNNS P+P DPNWISP P NPTIQS+M QQLSPT H
Sbjct: 197 KYFLRQTSGKKERKRSSIHDITTVDNNSIPMPIDPNWISPAPNNPTIQSTM-QQLSPTSH 233

Query: 243 LQDQGGAL--QTYRFPM 257
            QDQG +L  Q YRFPM
Sbjct: 257 GQDQGASLGFQNYRFPM 233

[Close]
BLAST of Cp4.1LG01g25070 vs. NCBI nr
Match: gi|920693134|gb|KOM36359.1| (hypothetical protein LR48_Vigan02g250900 [Vigna angularis])

HSP 1 Score: 247.3 bits (630), Expect = 2.9e-62
Identity = 140/264 (53.03%), Postives = 165/264 (62.50%), Query Frame = 1 

Query: 3   WTRSEDKLFEEALVVVPADLPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGRVEL 62
           WTR  DKLFE AL++VP DLPDRW ++A  VPGK P EV++HY+ALV+DV EIDSGRVE+
Sbjct: 20  WTRYHDKLFERALLLVPEDLPDRWNQIAVHVPGKTPAEVREHYDALVHDVFEIDSGRVEV 79

Query: 63  PSYSDESA-------VGSPEWDSSGQISFGSKAKPGGDSERKKGTPWTXKLEFRRPMGET 122
           PSY D+ A        G+  WDS+ QISFGSK K                       GET
Sbjct: 80  PSYVDDLAPPQLSGGAGNSAWDSANQISFGSKPK----------------------QGET 139

Query: 123 KQRVSNDVHVTLGLSRSLVSLLMQSYVWHYDRLFLLGLKKFGKGDWRSISRNVVITRTPT 182
           +++                      +     RLFL+GL KFGKGDWRSISRNVV+TRTPT
Sbjct: 140 ERKKGTP------------------WTEEEHRLFLIGLSKFGKGDWRSISRNVVVTRTPT 199

Query: 183 QVASHAQKYFLRQNSGKKERKRSSIHDITTVDNNSAPIPFDPNWISPVPNPTIQSSMQQQ 242
           QVASHAQKYFLRQNSGKKERKRSSIHDITTVD+NS P+P D NW+ P P  ++Q S Q  
Sbjct: 200 QVASHAQKYFLRQNSGKKERKRSSIHDITTVDSNSLPVPIDQNWVPP-PGTSMQQSSQDM 242

Query: 243 LS-PTGHLQDQGG--ALQTYRFPM 257
           LS  +  +QDQ G      Y F M
Sbjct: 260 LSYASSSMQDQMGPFGYSNYGFEM 242

[Close]
BLAST of Cp4.1LG01g25070 vs. NCBI nr
Match: gi|590585965|ref|XP_007015574.1| (Duplicated homeodomain-like superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 242.7 bits (618), Expect = 7.2e-61
Identity = 132/256 (51.56%), Postives = 165/256 (64.45%), Query Frame = 1 

Query: 3   WTRSEDKLFEEALVVVPADLPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGRVEL 62
           WTR EDKLFE+ALV++P  +PDRWQ++A+ VPGK  +EVK+HYE L+YDV EID+GR+E+
Sbjct: 28  WTRLEDKLFEQALVMLPEGIPDRWQKIAERVPGKSAKEVKEHYEMLLYDVYEIDAGRIEI 87

Query: 63  PSYSDESAVGSPEWDSSGQISFGSKAKPGGDSERKKGTPWTXKLEFRRPMGETKQRVSND 122
           PSY+D+S++ S  WDS  QISF          E  K           +  GE +++    
Sbjct: 88  PSYADDSSLLSSSWDSDTQISF----------EASKP----------KQHGENERKKGTP 147

Query: 123 VHVTLGLSRSLVSLLMQSYVWHYDRLFLLGLKKFGKGDWRSISRNVVITRTPTQVASHAQ 182
                             +     +LFL+GL KFGKGDWRSISRNVV+TRTPTQVASHAQ
Sbjct: 148 ------------------WTEEEHKLFLIGLHKFGKGDWRSISRNVVVTRTPTQVASHAQ 207

Query: 183 KYFLRQNSGKKERKRSSIHDITTVDNNSAPIPFDPNWISPVPNPTIQSSMQQQLSPTGHL 242
           KYFLRQ+S KKERKRSSIHDITTVD+N+   P D NWI  +  P  Q  ++ QL P  HL
Sbjct: 208 KYFLRQSSVKKERKRSSIHDITTVDSNTMDAPVDQNWIPVLGGPVQQVPVRHQLPPGSHL 245

Query: 243 QDQGGAL--QTYRFPM 257
             QGG+L  Q Y +PM
Sbjct: 268 PAQGGSLGYQNYSYPM 245

[Close]
BLAST of Cp4.1LG01g25070 vs. NCBI nr
Match: gi|951021038|ref|XP_014512566.1| (PREDICTED: transcription factor DIVARICATA [Vigna radiata var. radiata])

HSP 1 Score: 242.3 bits (617), Expect = 9.4e-61
Identity = 136/263 (51.71%), Postives = 161/263 (61.22%), Query Frame = 1 

Query: 3   WTRSEDKLFEEALVVVPADLPDRWQRVADLVPGKLPREVKDHYEALVYDVLEIDSGRVEL 62
           WTR  DKLFE AL++VP DLPDRW ++A  VPGK P EV++HY+ALV+DV EIDSGRVE+
Sbjct: 20  WTRYHDKLFERALLLVPEDLPDRWNQIAVHVPGKTPAEVREHYDALVHDVFEIDSGRVEV 79

Query: 63  PSYSDESA-------VGSPEWDSSGQISFGSKAKPGGDSERKKGTPWTXKLEFRRPMGET 122
           PSY D+ A        G+  WDS+ QISFGSK K                       GET
Sbjct: 80  PSYVDDLAPPQLSGGAGNSAWDSANQISFGSKPK----------------------QGET 139

Query: 123 KQRVSNDVHVTLGLSRSLVSLLMQSYVWHYDRLFLLGLKKFGKGDWRSISRNVVITRTPT 182
           +++                      +     RLFL+GL KFGKGDWRSISRNVV+TRTPT
Sbjct: 140 ERKKGTP------------------WTEEEHRLFLIGLSKFGKGDWRSISRNVVVTRTPT 199

Query: 183 QVASHAQKYFLRQNSGKKERKRSSIHDITTVDNNSAPIPFDPNWISPVPNPTIQSSMQQQ 242
           QVASHAQKYFLRQNSGKKERKRSSIHDITTVD+NS P+P D NW+ P P  ++Q S    
Sbjct: 200 QVASHAQKYFLRQNSGKKERKRSSIHDITTVDSNSLPVPIDQNWVPP-PGTSMQQSQDML 241

Query: 243 LSPTGHLQDQGG--ALQTYRFPM 257
              +  + DQ G      Y F M
Sbjct: 260 SYASTSMHDQMGPFGYSNYGFEM 241

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g25070 vs. Swiss-Prot
Match NameE-valueIdentityDescription
DIV_ANTMA5.2e-3540.51Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA PE=2 SV=1[more]
MY1R1_SOLTU2.9e-1767.16Transcription factor MYB1R1 OS=Solanum tuberosum PE=2 SV=1[more]
RADL6_ARATH1.2e-1253.97Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1[more]
RAD_ANTMA4.7e-1252.38Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1 SV=1[more]
RADL3_ARATH6.2e-1253.97Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1[more]
BLAST of Cp4.1LG01g25070 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KE73_CUCSA2.9e-6961.09Syringolide-induced protein 1-3-1B OS=Cucumis sativus GN=Csa_6G046240 PE=4 SV=1[more]
A0A0L9U1R5_PHAAN2.0e-6253.03Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g250900 PE=4 SV=1[more]
A0A0S3SLK8_PHAAN2.0e-6253.03Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G025600 PE=... [more]
A0A061GZK5_THECC5.0e-6151.56Duplicated homeodomain-like superfamily protein isoform 1 OS=Theobroma cacao GN=... [more]
A0A151TQ52_CAJCA6.4e-5649.22Myb-like protein J OS=Cajanus cajan GN=KK1_008325 PE=4 SV=1[more]
BLAST of Cp4.1LG01g25070 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G04760.15.1e-4947.41 Duplicated homeodomain-like superfamily protein[more]
AT5G08520.14.8e-3945.41 Duplicated homeodomain-like superfamily protein[more]
AT1G49010.11.2e-3438.02 Duplicated homeodomain-like superfamily protein[more]
AT5G58900.16.1e-3443.41 Homeodomain-like transcriptional regulator[more]
AT5G01200.15.7e-3236.08 Duplicated homeodomain-like superfamily protein[more]
BLAST of Cp4.1LG01g25070 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659113502|ref|XP_008456608.1|1.9e-6961.48PREDICTED: transcription factor DIVARICATA [Cucumis melo][more]
gi|449446301|ref|XP_004140910.1|4.2e-6961.09PREDICTED: transcription factor DIVARICATA [Cucumis sativus][more]
gi|920693134|gb|KOM36359.1|2.9e-6253.03hypothetical protein LR48_Vigan02g250900 [Vigna angularis][more]
gi|590585965|ref|XP_007015574.1|7.2e-6151.56Duplicated homeodomain-like superfamily protein isoform 1 [Theobroma cacao][more]
gi|951021038|ref|XP_014512566.1|9.4e-6151.71PREDICTED: transcription factor DIVARICATA [Vigna radiata var. radiata][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR017877Myb-like_dom
IPR009057Homeobox-like_sf
IPR006447Myb_dom_plants
IPR001005SANT/Myb
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g25070.1Cp4.1LG01g25070.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 2..46
score: 7.4E-6coord: 146..184
score: 7.
IPR001005SANT/Myb domainSMARTSM00717santcoord: 2..51
score: 0.15coord: 137..187
score: 0.
IPR006447Myb domain, plantsTIGRFAMsTIGR01557TIGR01557coord: 146..188
score: 1.7
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 146..183
score: 1.
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 3..56
score: 7.57E-10coord: 145..189
score: 5.53
IPR017877Myb-like domainPROFILEPS50090MYB_LIKEcoord: 1..49
score: 6.876coord: 146..185
score:
NoneNo IPR availablePANTHERPTHR24078DNAJ HOMOLOG SUBFAMILY C MEMBERcoord: 2..80
score: 4.0E-50coord: 127..208
score: 4.0
NoneNo IPR availablePANTHERPTHR24078:SF279DUPLICATED SANT DNA-BINDING DOMAIN-CONTAINING PROTEINcoord: 2..80
score: 4.0E-50coord: 127..208
score: 4.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g25070Cucsa.364590Cucumber (Gy14) v1cgycpeB0961
Cp4.1LG01g25070CmaCh15G005270Cucurbita maxima (Rimu)cmacpeB318
Cp4.1LG01g25070CmaCh04G025120Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g25070CmoCh04G026290Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g25070CmoCh15G005340Cucurbita moschata (Rifu)cmocpeB280
Cp4.1LG01g25070Cla013687Watermelon (97103) v1cpewmB395
Cp4.1LG01g25070Csa6G046240Cucumber (Chinese Long) v2cpecuB459
Cp4.1LG01g25070MELO3C019904Melon (DHL92) v3.5.1cpemeB396
Cp4.1LG01g25070ClCG08G008340Watermelon (Charleston Gray)cpewcgB417
Cp4.1LG01g25070CSPI06G04030Wild cucumber (PI 183967)cpecpiB460
Cp4.1LG01g25070Lsi08G006410Bottle gourd (USVL1VR-Ls)cpelsiB382
Cp4.1LG01g25070MELO3C019904.2Melon (DHL92) v3.6.1cpemedB460
Cp4.1LG01g25070CsaV3_6G004320Cucumber (Chinese Long) v3cpecucB0568
Cp4.1LG01g25070Bhi04G001316Wax gourdcpewgoB0526
Cp4.1LG01g25070CsGy6G004000Cucumber (Gy14) v2cgybcpeB797
Cp4.1LG01g25070Carg01672Silver-seed gourdcarcpeB1158
Cp4.1LG01g25070Carg15854Silver-seed gourdcarcpeB0096
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g25070Cp4.1LG13g10620Cucurbita pepo (Zucchini)cpecpeB199
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g25070Cucurbita pepo (Zucchini)cpecpeB038
Cp4.1LG01g25070Cucurbita pepo (Zucchini)cpecpeB379
Cp4.1LG01g25070Cucurbita maxima (Rimu)cmacpeB734
Cp4.1LG01g25070Cucurbita moschata (Rifu)cmocpeB401
Cp4.1LG01g25070Cucurbita moschata (Rifu)cmocpeB687
Cp4.1LG01g25070Bottle gourd (USVL1VR-Ls)cpelsiB365
Cp4.1LG01g25070Watermelon (Charleston Gray)cpewcgB398
Cp4.1LG01g25070Watermelon (97103) v1cpewmB438
Cp4.1LG01g25070Cucumber (Gy14) v2cgybcpeB635
Cp4.1LG01g25070Silver-seed gourdcarcpeB1176
Cp4.1LG01g25070Wax gourdcpewgoB0560