MELO3C019857 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATATTTATTATTAATGTAGTAAATACTAAATAGAAAGTTAGGTCACGCCGCCTCTATCATCTCTTGGTCACTCTCTCGTCTCGGCCTCTCGTCTGACGCCGTCGCCGGCGTTCAATCGTCTCTCCTTCTCAGTCTCCGGCGTTCATCGCCGATCGTCTCTACTTCTCAGAAGTCTCCGATCATTCGCTGGCGCTTGGCTCTCCCTAACCGTTGCTTTGCTTTGTTGTGTTGCCGTTGGCTACGATACTTTTTGCACTTCAATCGGATTATTTTTCTAATAACTTTTGCTTAAGTGAGTACATATTTTCTCTCTACTTAGAACTTTTGGATGACATTCATGACCATGCTTGAACAAGATTTATTCTAGACGATAAGTTCTTAGAATTGGGGGATGCTTTGGTAGTTTTATCATTTCTTATCTACTTGGTTTGATTCAACTCTGTTTAAGTGAAACCATCCGGGGGAGATTGGGAAAAACCTTCCAGGTGAGATTGGGGAAAAACCTTCCAGGTGAGAATGGGGAAAAACCTTCGGTCATATTGACCTTACTTTGGTAGTTTTATCATTTATTATCTATCTAGTTGGTTTGAGTGAAAATGGGAGTGGGAAAAACCTATCATATTGGCCTTACTTTGGTAGCTTTATTATTTATTATCTACTTGTTTTCATTCCTTTGTTCAAGTGAAAATGGAAGGTAGATTGGAGAAAAACCTTCAGTCATTACTTTGGTAGTTTTATTATTTATTATCTACTTGGTTTTGTTCCACCTTGTTTAACAGGATTGATTGGAGGAAAACCTTCAGTCATATTGGCCTTTAGTCATTCCTACTCGACATTGTCTTAGGGAAGTCACCACCGTCGGTGGGATCGCACCCAATGTTTTATTTATTTGTTTGTTAGGTTATTGTTGGTTTATTCTCTGCACCCACGGAACGGAGAAGAAAGTAAAGAACTGTATATTTTCTTCATTGGATTTGTTCTTCAAATTAGCGTTATGAAAATATAAAAACAATGTCTACCTGAAAAATTAGTAACATAAATAAATTGAAATTACGAATAAAAATAGCAAAATACATATGGTAGAGATTTTCTTCCGTTCCAGTCAATCTTCTGAATGTATGAGTTGCAGTTCATTTGATTATCTCATTCGTGCCTTTTGTTGCAGGAAATTTAGGTTTGTTATTTGCAGAAGAAAAGAATGAGGTTGGAGAAGTGTTGGTTCTGTTCCTCCCCTATATATCCAGGACATGGTATTCAGTTTGTTCGCAATGATGCAACGGTAAGGACGCAGGTTGCGAACTTCCACGATTTGTATGCTTTGTTCTGCACATTGCTTGTATGTTCTTACTTGCTAATGCTTACGGATTGACGAGACTACATCGTTCTGTTCTATTTTGGCTTGTTTGTGATGCATATTTTAGGCTATAGAAATAGATAGTTGTTCTTGTCTTGCTGTGCTTTTAAATTAGTAATGGTGGGTGGGAGTCCCATGTTCCTATTTCCTAATGTGATTTTATTCTGCAGATTTTTAGATTTTGTCGATCAAAATGCCACAAGAACTTCAAGATGAAGAGAAATCCTCGTAAAGTAAAATGGACTAAGGCTTATAGGAGGTTGCATGGAAAGGATATGACAAAGGTAAACTTTCTTCATTTATTTGTGGAGCAAATTGGATTTTATAAGTACAAACTTCCATTGTCTTCGTCCTTTTAATTGTTGTTTCATTTGTATTATCCAGGACTCTACTTTTGAATTTGAGAGGTGGCGTCATAGACCACATAAATATGACAGAAATGTCACTGAAGATACATTGAAGGCTATTAAGAAGATTGATAAAATCAGAATGGATAGGGAGTCGAGACATATTGCACGCAGGTTGAAAATTTTTTCCATTCCCATTTGTTACATGCCTATATATTTTGCAAATACTATTTCAGTTGTTAACTCAGGATCGTTCACATTTGCAGACACCAAGGAAAGAAAGCAAAGGAGTTCAGAGAGGCAAAGAAGGAATTGGATCAAAGCATCAGTTTGGTCAAAGCACCTTCCGTTCTCAAGGAGGATCCTTCCCTCACCCTTCCAAAGCTCAAAGTCAAAGTGGTACCAACACAATCAGAGCAAGATCGTATGGAAGAATGAGTTTAATCAATCTTATATCACTATATCAAATATTTACGTAGTAGTTACGTTTTAACATATCTAGAACTGTCACAGTTCTTGTGCAGTGGTAGATTATCTTTGTTTGTCCTTGCGCAAGCATGGTTATCATGTACAATTTCATTTTGATAATGTGTTTTTTTGACTTTAATAGACAAACTTCTAAAAAATTTTATTGAATCATATCCAACCGGTTTTTGCAGTTTTGTTTGAGGCTA ATATTTATTATTAATGTAGTAAATACTAAATAGAAAGTTAGGTCACGCCGCCTCTATCATCTCTTGGTCACTCTCTCGTCTCGGCCTCTCGTCTGACGCCGTCGCCGGCGTTCAATCGTCTCTCCTTCTCAGTCTCCGGCGTTCATCGCCGATCGTCTCTACTTCTCAGAAGTCTCCGATCATTCGCTGGCGCTTGGCTCTCCCTAACCGTTGCTTTGCTTTGTTGTGTTGCCGTTGGCTACGATACTTTTTGCACTTCAATCGGATTATTTTTCTAATAACTTTTGCTTAAGAAATTTAGGTTTGTTATTTGCAGAAGAAAAGAATGAGGTTGGAGAAGTGTTGGTTCTGTTCCTCCCCTATATATCCAGGACATGGTATTCAGTTTGTTCGCAATGATGCAACGATTTTTAGATTTTGTCGATCAAAATGCCACAAGAACTTCAAGATGAAGAGAAATCCTCGTAAAGTAAAATGGACTAAGGCTTATAGGAGGTTGCATGGAAAGGATATGACAAAGGACTCTACTTTTGAATTTGAGAGGTGGCGTCATAGACCACATAAATATGACAGAAATGTCACTGAAGATACATTGAAGGCTATTAAGAAGATTGATAAAATCAGAATGGATAGGGAGTCGAGACATATTGCACGCAGACACCAAGGAAAGAAAGCAAAGGAGTTCAGAGAGGCAAAGAAGGAATTGGATCAAAGCATCAGTTTGGTCAAAGCACCTTCCGTTCTCAAGGAGGATCCTTCCCTCACCCTTCCAAAGCTCAAAGTCAAAGTGGTACCAACACAATCAGAGCAAGATCGTATGGAAGAATGAGTTTAATCAATCTTATATCACTATATCAAATATTTACGTAGTAGTTACGTTTTAACATATCTAGAACTGTCACAGTTCTTGTGCAGTGGTAGATTATCTTTGTTTGTCCTTGCGCAAGCATGGTTATCATGTACAATTTCATTTTGATAATGTGTTTTTTTGACTTTAATAGACAAACTTCTAAAAAATTTTATTGAATCATATCCAACCGGTTTTTGCAGTTTTGTTTGAGGCTA ATGAGGTTGGAGAAGTGTTGGTTCTGTTCCTCCCCTATATATCCAGGACATGGTATTCAGTTTGTTCGCAATGATGCAACGATTTTTAGATTTTGTCGATCAAAATGCCACAAGAACTTCAAGATGAAGAGAAATCCTCGTAAAGTAAAATGGACTAAGGCTTATAGGAGGTTGCATGGAAAGGATATGACAAAGGACTCTACTTTTGAATTTGAGAGGTGGCGTCATAGACCACATAAATATGACAGAAATGTCACTGAAGATACATTGAAGGCTATTAAGAAGATTGATAAAATCAGAATGGATAGGGAGTCGAGACATATTGCACGCAGACACCAAGGAAAGAAAGCAAAGGAGTTCAGAGAGGCAAAGAAGGAATTGGATCAAAGCATCAGTTTGGTCAAAGCACCTTCCGTTCTCAAGGAGGATCCTTCCCTCACCCTTCCAAAGCTCAAAGTCAAAGTGGTACCAACACAATCAGAGCAAGATCGTATGGAAGAATGA MRLEKCWFCSSPIYPGHGIQFVRNDATIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHGKDMTKDSTFEFERWRHRPHKYDRNVTEDTLKAIKKIDKIRMDRESRHIARRHQGKKAKEFREAKKELDQSISLVKAPSVLKEDPSLTLPKLKVKVVPTQSEQDRMEE*
BLAST of MELO3C019857 vs. Swiss-Prot
Match: RLP24_ARATH (Probable ribosome biogenesis protein RLP24 OS=Arabidopsis thaliana GN=At2g44860 PE=1 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 9.2e-57 Identity = 111/168 (66.07%), Postives = 126/168 (75.00%), Query Frame = 1
BLAST of MELO3C019857 vs. Swiss-Prot
Match: RLP24_DICDI (Probable ribosome biogenesis protein RLP24 OS=Dictyostelium discoideum GN=rlp24 PE=2 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 4.0e-44 Identity = 77/142 (54.23%), Postives = 105/142 (73.94%), Query Frame = 1
BLAST of MELO3C019857 vs. Swiss-Prot
Match: RLP24_MOUSE (Probable ribosome biogenesis protein RLP24 OS=Mus musculus GN=Rsl24d1 PE=2 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 5.4e-41 Identity = 83/169 (49.11%), Postives = 116/169 (68.64%), Query Frame = 1
BLAST of MELO3C019857 vs. Swiss-Prot
Match: RLP24_HUMAN (Probable ribosome biogenesis protein RLP24 OS=Homo sapiens GN=RSL24D1 PE=1 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 1.2e-40 Identity = 82/169 (48.52%), Postives = 116/169 (68.64%), Query Frame = 1
BLAST of MELO3C019857 vs. Swiss-Prot
Match: RLP24_BOVIN (Probable ribosome biogenesis protein RLP24 OS=Bos taurus GN=RSL24D1 PE=2 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 1.6e-40 Identity = 72/137 (52.55%), Postives = 102/137 (74.45%), Query Frame = 1
BLAST of MELO3C019857 vs. TrEMBL
Match: A0A0A0LQI2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G385010 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 5.6e-93 Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 1
BLAST of MELO3C019857 vs. TrEMBL
Match: A0A0A0LIW9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G855990 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 5.6e-93 Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 1
BLAST of MELO3C019857 vs. TrEMBL
Match: K4D2A8_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 3.8e-73 Identity = 137/167 (82.04%), Postives = 152/167 (91.02%), Query Frame = 1
BLAST of MELO3C019857 vs. TrEMBL
Match: A0A0V0HJF4_SOLCH (Putative ribosome biogenesis protein RLP24-like OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 282.0 bits (720), Expect = 4.9e-73 Identity = 137/167 (82.04%), Postives = 151/167 (90.42%), Query Frame = 1
BLAST of MELO3C019857 vs. TrEMBL
Match: A0A068V7P7_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019297001 PE=4 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 8.4e-73 Identity = 132/167 (79.04%), Postives = 151/167 (90.42%), Query Frame = 1
BLAST of MELO3C019857 vs. TAIR10
Match: AT2G44860.1 (AT2G44860.1 Ribosomal protein L24e family protein) HSP 1 Score: 221.1 bits (562), Expect = 5.2e-58 Identity = 111/168 (66.07%), Postives = 126/168 (75.00%), Query Frame = 1
BLAST of MELO3C019857 vs. TAIR10
Match: AT3G53020.1 (AT3G53020.1 Ribosomal protein L24e family protein) HSP 1 Score: 81.3 bits (199), Expect = 6.4e-16 Identity = 43/127 (33.86%), Postives = 67/127 (52.76%), Query Frame = 1
BLAST of MELO3C019857 vs. TAIR10
Match: AT2G36620.1 (AT2G36620.1 ribosomal protein L24) HSP 1 Score: 80.5 bits (197), Expect = 1.1e-15 Identity = 43/127 (33.86%), Postives = 67/127 (52.76%), Query Frame = 1
BLAST of MELO3C019857 vs. NCBI nr
Match: gi|659113416|ref|XP_008456562.1| (PREDICTED: probable ribosome biogenesis protein RLP24 [Cucumis melo]) HSP 1 Score: 349.7 bits (896), Expect = 2.7e-93 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 1
BLAST of MELO3C019857 vs. NCBI nr
Match: gi|700207913|gb|KGN63032.1| (hypothetical protein Csa_2G385010 [Cucumis sativus]) HSP 1 Score: 348.2 bits (892), Expect = 8.0e-93 Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 1
BLAST of MELO3C019857 vs. NCBI nr
Match: gi|778672743|ref|XP_011649861.1| (PREDICTED: probable ribosome biogenesis protein RLP24 [Cucumis sativus]) HSP 1 Score: 348.2 bits (892), Expect = 8.0e-93 Identity = 166/167 (99.40%), Postives = 167/167 (100.00%), Query Frame = 1
BLAST of MELO3C019857 vs. NCBI nr
Match: gi|659133122|ref|XP_008466567.1| (PREDICTED: probable ribosome biogenesis protein RLP24 [Cucumis melo]) HSP 1 Score: 347.1 bits (889), Expect = 1.8e-92 Identity = 165/167 (98.80%), Postives = 167/167 (100.00%), Query Frame = 1
BLAST of MELO3C019857 vs. NCBI nr
Match: gi|808175917|ref|NP_001294920.1| (ribosome biogenesis protein RLP24-like isoform a [Solanum lycopersicum]) HSP 1 Score: 282.3 bits (721), Expect = 5.4e-73 Identity = 137/167 (82.04%), Postives = 152/167 (91.02%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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