MELO3C019829 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C019829
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRNA binding protein
Locationchr3 : 22058452 .. 22069445 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAGCTTTGGCAGTCGCGGTGAAAAAATGGCGCGCAAGGGAAAGAAAACCAATAACCCTACTAGCGACAGCGACGAGGACGAAACTTTCTATTACCGGTATCCCTCCGCTGCCTCTTCTGCCCCGCCGCTGCCTTCGTCTTCACAGTCGCACTTCTCATCGCAATCGCACTCACACTCTTCCACTAAGTCCGGCGGTGGTTCCGGAGGTTTGGTTCCTTCGAAGTCTACTGTCTATGTTTCCAATTTCGACTATTCACTCACTAATTCCGACCTCCACACTCTCTTCTCCACCTTTGGTAAGATCGCTCGTGTTACGGTGTTGAAAGATAGACAGACTCGCAAGTCTCGCGGCGTTGCCTTCGTGCAGTTTATTTCTCAGGACGACGCGGTGAAGGCCGCGAAACAGATGCACGGGAAGATTTTGAATGGCCGTGTTCTTAAGGCTGCTATAGCGACTGATAATGGTCGCGCCGCTGAGTTTATAAGGAAGAGGGTTTATAAGGATAAGAGTAGGTGCTACGAGTGCGGCGCAGTTGATGGGCATTTGTCTTATGAATGCCCTAAAAATCAATTGGGGCCAAGGGAGCGACCAGAACCGAAGCGAGGGAGAAGGGGTGGAGTTGGTGCTAGGCACGAGGAGGATTGGGGATCGGATGTTGGAGAAGCGTTTGAGGATGACAATTGGGCCTCGGTGGTGGACGGAGATGCAGACCAGAGACTCCTGACTGGCGGTGAGAACATTGTAGAGAAGAAAAAGGCGAAGAAAGCAAGTTATTTCAGTGACGAGAGCGGCGAAGATGATTAACCGAGCCTGTCTCTTTGGGAAGAGTTTGTAAAAGGTACGTGGTTTTTACTATTGTATTGTTTTTTTTTTCTGCCGTTCCATTATATTTTGAACCTCTATTTCTGGTTGATTTTGGTGCATGATTTTTGGGAGGCATTGTTAGATGAGATAAAGCTTACAGAATTTAAATTTGGGCTGCCGGGTGCGATAAGTAATAATGAGTTATAGGTACGTAGTCTACATTCTGCTTCACGATAATGTCAGGAGTATTCAGGATTGGGATACTAACTGCCAACCTATGGCACTTGCCCTCCACCAATAGGTTAATAATTCAAACTACCCACCTCCAAATAGAAATGTTATGTTGAATTCACAGACTTTAGTTGGAGAGCTGAGATGTAATTAGAATTATTGGGGAATTGAAGACCGAACCGAAATGAGATCATAAGTTGTGAAAACAGTGAAAAAGAGGTTTGGATTGAAAAGTATCATATATGAATGAGTTTTAATTACAAATCAGCTCTAAAATGCTGAATCCAAACATTGGTTATTGATTACATTATATTACAATCTCATCCAATTACGGTCCACCGAACACCCAAGGATTTAGGTACTGTTGCTAACAGTATATGAGCCTAGGTACTGTTGCTAACAGTATATGAGCATGCCTTAGCAATAGCCGACCTTCACTGGAATTTGGAAGTGGTAATAAATACTCGATCTTCTAATTTCTCCTATTTTCTTTTAAGAGTTAAGGATTTCTGCAGTCAGAGAGTATAAGTCGCATATTCAATCCCTTGAGCATGAGCTTGTACTTCTGTACATTTAGGAATTCCCATATCATGATCTCGGCGTTTAATCCCAAAGGCTTGATTTCCCATGTGCCAAGACTTCTCCAAAGGATTCTTTGATCAAGCATTATTATTATCATTATTCTTTTTGAGGAGATATTTTTTGTATCAGAAACATATAAATAATTTCATTGATGGGATGAAATTACAAAAGAGCACATATGCTGCGAGAGATTGCAAAATACTATTCCATTGCGATATAAGAGAAGTAAGATTGTAATCACGAAAGTGTGGGGTGAATTAATACCAAGTGAAGGTTGTATACAAAAGATAATCGAAAAGTGAGTGAAGTCGGATTCCTTAACTTTGAAAGTACGATGGTGGCATCTGTTTCATATGAGCCAAAAGAGAACTCTTCAGTAAGATTATATGAAAAGTAAGGGTGGGGAACTTCAGAAAACCCAAGGGACTTGGGAAAAAAATCAGTCCAATTGACATCAATCAATAATGAGAGTGAAGTCATTACTTAAACCTTTAAAGTGGATACATGTTCCATTAGGCCTTGATCTCCTTCATTTTGCTGAACTTATGCTGGAGGTGTTGTTCAAGGTATTATTCTTTTTCTATCTTTTTCTGTGTTATGAGATTCTGTTTTGGCTGAGATGAATTTTGTTGGGATGATGAAATTTTTTTACATGCAACTGCTGAGATGAATTTTGTTGGTTGAGATTTAAGGTACAAGTAATAATGTTAAACTGTCTTTATATGTAATTTTAGCTTCAGTGTTTATATGGAATTGCCCTAAACCCGTATTAAAGAATTGAGCTTTAGTGTTTTTATATGTTTTGGCTGAGGTGAATTTAGTTTGAGGAATTGGAATTGTGTTTATATGTAAATTTGTAATATGGGTTGATAAAAATAATTCTTTTAAAGCTCAATTCTGTACTTACTCTCCCTCTCTTTTTTGTGTTATTCTTTGACCTATTTCTTACATTTTACTTTTTGTTTCATGATATTTGGCGGCTGTTATGTTATGATTTTTTTTTTTTTAATGAACTGACTTTGCAAATGTTGAACTAACATTTTGGGGGTGGGGGGCTGTGGCTGTTTTCATATGCATATAAATTTTGATTTAAATTTTTAACAAGTTCTACATTATGAGGAAATAGTGACTTTGTTTCGTTTGAATTTTGAAGTCTAGAAACTGAGATTAGTTGACCTAAATGTTTGGTTTGTGTCGTGAATTATGTATGCCCCTTTTCCTTTCTAGTTTATTGATTTTCTACTGTATTCCAATTTTAAAATTACATTCTAAATGTCACAAAAATCATCCGAACAACATTGCGTAAATGAGGTTGTCGAAATTGATGGATTAAGAAGTGAGGGGCCATGGTCAGACAAGAGTGAAACTATATTTGGTGATTTAATGGATGAAGAGCTTGTAAAAGGCAATAGATCAACCACAACATTTACAAATGCTAAATGCTAAATCGACCAACTAAATGCTAGTACGATATAGTTATACCAATGATCAATTGAAAAACAAAGTTCAATAAATTAAGACAAATTTGCAAAAACTTCACAAAGATATTGAGTGAAAAGACTGGAAATGGTTGGGATCCATTATCAGGCTCTATCAATTTGGAAAAGGAGCGATGAACAACTTTTTAAGGTATAATATTAGAGTGTGAGTGTTTTTTTTTCTTTTTCTTTCTATTTTTGATCATCTATTGAATTATGGTTGGTTTTATATCGTGTTGTGCTACTACTTCTTACAGAGCTAAAAAGTTTAAAAAAAGTGGTTCAACATCATTTTTATCTTCAAAATCTAAATTTATAAGTTTTGTTTATGGGCAAACATTTACACCTGTGTCAATACTATCTCCAAAAATACTCATTGGCTTTTCATAATGTGGGTAGCCACTTTTTTTTTTGAACTTTTGAGCCTCTCTTATTCACCTGGAAGTAGCGGTTCGGTTTGAAGCTAGAACCGTATCAAACCGCAAAATGCAAAAAAAAAAATCTCATATGAAACTAAATTGCTCATATGTGCAAACCGAACCGCTTATGCATAAGTATTATAATCGAAATCCTTTATGAACATTATACATAAGATCTTGTACTTCATTTTAAACGATGGCTTTCAAATTTAAACGATCGTGTAGATCATGATACATGATCTCAGGCCTTAGTTGCACCGAGATGCCCCGGGATGAAAGAATTCTGCCTCTAATTCATTCGATTTTGGGTATATAATGCCCTAAGATGAAATAATTTTTCAAATAGTTATTGGATCTCGGGCCTTAGTGGCACTGATATGGCTTGGGATGAAATAATTCTGTCTTTATTTTATTCGATCCCAGGTATACATTCCCCCGATATGCCCTGGGATGAAAGACTTTTGTCTTTAGTTATTCGATCTCGGGCTTTAGTGGCACTGAGATGGCTTAATGTCTGTATTTTATATATTTAATTTTTTTTTTTAATAAAGCAGTTTAGTTCTGTTTTAGAATCGGTTTAATGTCTTAAATCGAACCAATTTCAATTTCAACAATCTCATTGATGATTTTTGTGACATCTAGAATGTAATATTAAAATTGGAATAAAGAAGAAAATCAATAAAAGTAGAAAGGAGAAAGGGGCATAGATAATTAACGACACAAACCGAACATTTAAGTCAACTAATCTAAGTTTCTAGACTTCAAAATTCACACCCATCCTAGTTTTTAAATGAGGCCATTCCACTACAATACATATGAAACAAAGTCACTATTTCCACCTAAAAATTTTCATCATATGAAAAAAGCTCCTGCCCCGGTTAGTTCTTTTAGTTCCAACATCTGCAAAAATAGTTCATAACATAACAGTCATAAAAAATATCATGAAACAGAACTAAAGAAATGGGTCAATGATCTCATTCAGAAAACAAACATTTTCCTAAGGAAGTACACGGAAAAAGAAAGGGAGAGTAAGTACAGAATTGAGCTGTAGTACAATTATTCTTCATCAACCCATATTACAAAATTACATATAAACACCAAAACATATAAACGCTAAAGCTCAATTTTGTAATATGGGTTCAAGGTTGTTCCATAAGTAACACTAATATTTATACTTTAAATCTCAGCCAACAAAATTCATCTCAGTAGTTACCGATAAAATTTCATCATTCCCAATAAAATTCATCTTAGCCGAAACAGAATCTCATTACACAAACAAAGATAGAAAAAGAATAATACCTTGAACGACACCTCCGGTACAAATCAAGAAAAATATAGAAACAGAGAGATCAGAGGGGAGAAACAACACATACCTCCCTAACTATAGCCAAACGTAGCCCTAGCCGGAGAGAATGGAGTCGGAGAACGAAGAGAGAAGACAGCCAGAGAATGAAAAGAAAATTTGGAGAGAAGAGAACAAGAAATGGAACAAGAGAAACCTTTTTTTATTCTCATGAATTTCTAAATGAAATCAGAAACGTTTCTAATATTTTGAGAACGAGAAACAGGGAACGTTACCAAACACATTTTTTTTTCTTAGAAAATTAGAAACAAAAAACGGAAAAGTTACCAAACATGTTCTAATTTTTTCTAGAGTCCTGACTCTTATTGGGCAACTTAGAGATGGAAATCCCCGTCATCCTCATCAGATCTAAAAAATTACCATGCAATTTAAATCGCAATCCAAGAACCTAAGTTGAGGTTTCACATTATCTAATCATGTAAAATCCATATTTGTGCAGAGCTTAATTATAGAGGTTCAGAATATGCATATTTGGTCATCGTCCGGCCTGGCTCTCTTTTCTTTTAATTCTTTCTTCTTGTGATAGCCTCTGTCTTTTCAAGGAATCTGATGTGCTACCTTAGTGAAGGTTGCAACTCTTCACCGTGAGTAGGAACCCTAGCTTGGTAGTAACTATTTAATGTTGATTTCTACTAATTTCTCTCATTAGCATAGATCAGGATGTCTCAAGAATAATATTCAGAAGGCATTCTTAGATTTTGCCCATTCTGAACCTGATTTGCACTTACTGTAGCGAAGGTGTGCCATGATCCAATTTTTTGGCCTCTGCTAGTGCTTTGTTGTCCTTGCTTGTAGGAAAAGGTTTGTTCAATTGAATGATAGGTATATCATTGATTAAATCTTTATTGGGAGTATAGTGGTCAGTGTAAAAGGAAAAAAGGTTTTCTATATTTGATTGGGATGGCATATAAAATTATAAATAAATGATTATGTAGATTGAGACTTCTTAGATGAACTCTTGGAAATTAAGGGTTTTAGGTAAGAAATAAAAATAATGGATTTACAACTGGTTTCGCGTTCAACAAAATAACTTTGGCCAAAACTATATTCATAAAGGACCAAGGGAAAATTAGTTTGAAGTCCTCTTTCTCTTTTCATTTTTGATGTTGATGTTGATTTGTTGATGTTTTTTGATGTTTTTTTTGATTTGTTGATTAGTTTTGTTAAGTTTTTTGTTAAGTTTTGTTAAGTTTAGGCTTCTTTAAAAAACCTTGATGTTATGAAAGCTTTATTATTGAATTGTATATTTTAGGATTTCATTTTACCCGCTCCAATTTGCAGAAGTGAAGCCATTTTTAGGAGTGGCAATGACATAAGCCTTTTTTCCCCTACAACCTGCAAATAGTTGAGAAGATTAAACTTTATATTAATATTTAGTAGAGGAAGTCGGCCACGCGGCTGGGTCCTTTGATCACTTTCCTTAGGTACTAATCAGCTATGACAGTTAATAGTTGAGAAGATAAAAAACAAAGTTGAGTGTTAGAAATAATGGGCTTAGGTCATGTTGAAAGCCCATGGGTAGCTAAGATTTACTTTGCCCTAATTTTTATTCTTTTAATTAAGCTCGTGTTGCCTATAAATATTTTCTCCCTCTGTACCTCTATTATTATTGAAAAAAATAATAAAAATAAAAGTATCGTAGTTTTTCACCCAGTACTTGCCTTTCCATGTAAGTTTATGTGCTCTTTGTCTCTACTTTCAATGTTGAGAAATTATAAAATACCTTTTTTCAGGAAGAGTGGGAAAATGAGCTTAGCTTATTGTCATGCCCCAAATATGCCCCATGAAAGTCCAAAATCTTTTGCGAATTAGGCTCTCTAGCATAGGCAAGAGGGGTTAAATCATGCCATGTAACATCAAAAGGCACCATGCGCGGCTAGCATGCGCGCTCGTGCCATGTCGAGTGATGATGCACAACTAAGCTCATGGCCAAGTGTGCAGGCGTGCACGCGACCATGTAGACGCAAGTGTGCACGACCAAGTAAGGCTGATGGTCGAATGGCGCACATGTAGATCCACCAGAGATGGAGACAAGAAGCAAGCATATGGACGCCTAGTCAGCAAGCACGTTAACATGTAAAGCAAGCACAATGACACACGAAAGGTGTCATCTGTCAAGGCCGAGAAGTGAAGTGCCATGATGTGATCTTGGAGAACGATACATCATCCAGACATGAAGATTAGTGGGCTAGCATGCCAAGTTGAACCTTAGGCAAGAAGGCAAGCTTTAATGCCATTTGTGGTGTTAGTGACATGCTTAGTGGGGCAAAATGGGGCCCCAGACTATGACCGCAGAAGTCGGGGTTCCGTTGCGAATTTGGAAGAGTGGCTTTGGAGTTAGATGCATATTGATGAGATATGCAAGCACGTCGAATTTCTTATCTATTGCAGTACAAATGGGTGCTCTACATTGGTGAATCGTTTGCACAATTAATGTGCAAGGGTGGAAAAAATGCAAGAGTGGAGAAAATGTAAGGGTTCAAAATGTACTTTAGGGGAGGCTTTCCACCACCCCTGGCCCCAGTGAGCTATCCCATGACACACTCGTGTGTCATGTCGTGTGCGAGTGTCGTTGGAGGAGTGTTTCAGGTAACTTCCAGTGATGAGTAACTCGATGACATTGAGAGTGTGTCGACATTGCGCCTTCTCGAAATGGTTGGAGGTTGCAATATAGGTCAGGCTCAATATCCTTAAACGACACATTATTGTTGCAAGTGTAGTCAAGCCCCAATAATGTCTAAATAGTTAGATGTCTGTAAAGTCTTAACAAGCGATAAGTACAAATGAGTCGAGGCCCAGTTCTCGATAAGTGTGCTCTTATGTGCAGTGAAGGTCAATGTCATCGTAGGGTTCGAAATGACATCCCAAGTTACTAGTGGGCACAGATAAGCAACAGAAAGCTAGTATTGACCCAATAGATGTCAATACTCATCCTGTTTGGCAAGTTAAGCATTCCTTGGCTCAAAGTGCAACAAGAACTATCTTGAAAGCTCTCAGTGGACCCGATAAGCTAGTAATGAACTAGAATGCTGCAGGAATGGTCTTGGAAGCATTTGATGGTCCTGTTAAGCTACTTACGGCAAAGTGAGCAAGAGAAATCATCCGATAAACCTTGTAAGCTAGTTCTAGTTTTACTTAAGGTCATGACTTATTCTAGAAAGGTCCCTTATCATGGGACGACCTAGAGGTCAAGAACCTAGATTATAAAGTTACTGTACGATGACCTTGGCTGCATATATGGGCAAAGTTGAGCCTCATGGCTTGCTTAGAGTAGAGGCAAGTGGGCTAGAGTTGCATATTACGGAAAATGCATGTACAAGCAACATGTATGGCCGAATAAAGTTCAGTTCCGTATGAGCTCTAGCTTCAAAGAGTCGAGTAAAAAGTAGAATGGGACTTGAGTTTCCCTTAAGGTTGACCATGAACGTGTATAATGCCATGGTACCACATGGTTTAAAAGTATTGATCATCACACCTAGCGCACGTGTGCTCTTGACCAATGTGCAGGACCCTTTGGACACCCGTTGAGCAGACTTCTTGAGATAGTGCCACAAGCCTCTCAAGTGTCTTGAAGCTTTTTAAAAGGATAGACAGTGCTATGCCATGCTAGCATGAACGAGGAGGCTTCAGATGCATCTTGAAGGCCCCATATAGCTTTAGGCCATGCTACTCTACATGCCCAAGGCCTAGGTAGCACTAGAAGGCCTTAGAAGGTGCAAGACTATGTGTCACGGGGGTGATTCCAGACTATGGATTTTTCGCCCTTTAACCTCGTGCGGTTTCCCTTGACCAGCAATGCACCCATAAGGACACTTGGAATGCTAGATGAACTCCCAAAGGGCATTTTCCTCACACACATACCTCATGGCTCAACTAGAGAGTAGGGTAGGAGAGTAGCACGTATGTATGGTGGAAATATAGCACAGTTTATTCGTTAAAGCTCTATCAAAACCACAGTTTACAAGTTTGAGATTTGGAAGTTCCCAGACATGGGAGAGCTTCCATACAAGATGTGACCTAACAAATGCTTGAGATATGACTCCCATGGTTGTTCGGAGGAGTGAGTTTGGGAGAGAAAGTGGGTAAGGGGGGGCATAATCGCCCACTAGCCATAAGAATAGGGTCTTTCTCTCATGTTCTCTACAACAATCTTCTACATATTACGATAGTGGAGAGCATGGTCATCCCCTTTCCCTGTTAATAGTACACACTTCTCACTTAACATAGTGTTAGGACCACCTTTCTATTATTTAGAATATAACCACACAGGATCTCTATGAACATGAGTCTTCTCCATCCTTTAAAATAATTATGCTTGTTAGGTTCTTTGGGCCAAGCACGCTTGATAATATTCTTCTGTTATCAAGTGTCTCACAAGTCATGTTGTCATGTTGTCAAGCTCCTGATGAAATGCATTCCCTTCTGCCATGGACCAAGCTTGCCTCACCTTGAGCACATGCATGTGTTGTCTCATGGCTCATTGTCTAATGCGCACCTAAGACACCCGCGTGTCAGCTTAACATTGCACTTGCTTGTGGAGTGTCGCCATTGTGGTTGGCACTTGCGCACACGTTGTTGCATCTGCATGGGTGCGCACACTCAAGTGCCTGTGTGTCTCATGTCCTTCTGTCCATGGGCATGTCTTGGCACTCCTTGATGCCTTATGTGCACCAAAAACCCATGTTAACCTTCATGCATGGGGTGTAGGCCTCTGGCCCATGCTAGCTCTATGTCACACCTGTGTGCACATATGCCGCACGCCTCGTGGGCACTTGCAAAGTCTTCTATGCTAGTGACATGTTGATGTCACTCATCTTGCTTTTGCCTAATTGTTGTCTGTGCACATGCCATGACACGGCTGCCTGCAAGGCATTGGCGATGTGTCAATGCTTGAGTATTGAGGTCCTGACACTATGCCAATATATGCTAGAAGGTTCCAAACCTCTCGGGAAGGCTCTAGAACATGTTGGAGTGCTCGACAAGGTCAGACACTACAGTGTTGATGAAGGTCTAGAAGATCCCATGAGCGTTTAGGTTTGTCTAATAGGCTTAGAATATGTCATCTAATACTAGAATGAGCCAAAGTGTACCAAGAAGGCGTAGAGAGAACTATGACCAACCCGCTAAGGGTGGTTAAGAGGCCCCTATGTCGGTTGGGGCTTGTCTATAAATAGCCCTAAGGGACTCATTTGCAAGCATCCACGAGAAGCATCAATAAAGCTCTCTCAAACATTCACTCAAACCCAAACCCACTCACTCTGACTACTCTCTTTCATGAATTTCTTCATGCCCCAGCAAGTCAAGAACTTCTAAAGGCTTGCTTCGTTTCTCCTTTGATAGCAAAGGCACCAAATTACTTTGTTTCTCCTTTGATAGCAAAGACACTTCAGTGCCGCACGTCTAATTGCCTGAAATTAGCAACTACGTGACATTATGGTTGTCATCACTAGTATTAACTTCCTATCTTCAATCAATAATTCTCTTTGATAGGAAGAACGTTTTAGGACCCGTTTATTGGTTTCCAATCTCTTTCTTACATAGTTCGATGATTAGTTCACATTTTGCAAAGTCTAGCAGACAAGTCCTTAAAGACACAACGATAATTTTAAGTATACATCTATATAAAGATCAATTTTAACTATTAAACTAATAAGAAGATTCATTTTTTTTCTATGGTAGGTTAGCCGCAGTAGAAGCGATTGATGCTTTCAATGCTCTTGTGAAAAAGGCCCATGGATGGTTTCCGCTCCAAGTTGGTGTGCCTTTGTCGTGCTAATTCTGTCTTGATCTTTTGTGAATTTGCTTGAACATGTTGGGGGTGGATGTTAAAGTCCTTCAGTTGCAAATACCTCTAACATTGTTGAGTATGAGTTCTATTGGTCATCCTTTCAAGAAAGGAAAAGGTGATATTATAGGAATTCATTATCGAAGGCTTATGACTTATTTGAAATGAGAGAAATCATCATACTTTTGAATATAGAGAAACTGAATTCACACAATTCTTGATTGTCCTTATGTACACTTTATATGTGTTAGTGTAAATTAAGCTAAGCTTTTTTGTTATTACAACCGTACTTATCTTATTGCAGACAAATGCATAGCTTCACGAGATCTC

mRNA sequence

ATAGCTTTGGCAGTCGCGGTGAAAAAATGGCGCGCAAGGGAAAGAAAACCAATAACCCTACTAGCGACAGCGACGAGGACGAAACTTTCTATTACCGGTATCCCTCCGCTGCCTCTTCTGCCCCGCCGCTGCCTTCGTCTTCACAGTCGCACTTCTCATCGCAATCGCACTCACACTCTTCCACTAAGTCCGGCGGTGGTTCCGGAGGTTTGGTTCCTTCGAAGTCTACTGTCTATGTTTCCAATTTCGACTATTCACTCACTAATTCCGACCTCCACACTCTCTTCTCCACCTTTGGTAAGATCGCTCGTGTTACGGTGTTGAAAGATAGACAGACTCGCAAGTCTCGCGGCGTTGCCTTCGTGCAGTTTATTTCTCAGGACGACGCGGTGAAGGCCGCGAAACAGATGCACGGGAAGATTTTGAATGGCCGTGTTCTTAAGGCTGCTATAGCGACTGATAATGGTCGCGCCGCTGAGTTTATAAGGAAGAGGGTTTATAAGGATAAGAGTAGGTGCTACGAGTGCGGCGCAGTTGATGGGCATTTGTCTTATGAATGCCCTAAAAATCAATTGGGGCCAAGGGAGCGACCAGAACCGAAGCGAGGGAGAAGGGGTGGAGTTGGTGCTAGGCACGAGGAGGATTGGGGATCGGATGTTGGAGAAGCGTTTGAGGATGACAATTGGGCCTCGGTGGTGGACGGAGATGCAGACCAGAGACTCCTGACTGGCGGTGAGAACATTGTAGAGAAGAAAAAGGCGAAGAAAGCAAGTTATTTCAGTGACGAGAGCGGCGAAGATGATTAACCGAGCCTGTCTCTTTGGGAAGAGTTTGTAAAAGGTTAGCCGCAGTAGAAGCGATTGATGCTTTCAATGCTCTTGTGAAAAAGGCCCATGGATGGTTTCCGCTCCAAGTTGGTGTGCCTTTGTCGTGCTAATTCTGTCTTGATCTTTTGTGAATTTGCTTGAACATGTTGGGGGTGGATGTTAAAGTCCTTCAGTTGCAAATACCTCTAACATTGTTGAGTATGAGTTCTATTGGTCATCCTTTCAAGAAAGGAAAAGGTGATATTATAGGAATTCATTATCGAAGGCTTATGACTTATTTGAAATGAGAGAAATCATCATACTTTTGAATATAGAGAAACTGAATTCACACAATTCTTGATTGTCCTTATGTACACTTTATATGTGTTAGTGTAAATTAAGCTAAGCTTTTTTGTTATTACAACCGTACTTATCTTATTGCAGACAAATGCATAGCTTCACGAGATCTC

Coding sequence (CDS)

ATGGCGCGCAAGGGAAAGAAAACCAATAACCCTACTAGCGACAGCGACGAGGACGAAACTTTCTATTACCGGTATCCCTCCGCTGCCTCTTCTGCCCCGCCGCTGCCTTCGTCTTCACAGTCGCACTTCTCATCGCAATCGCACTCACACTCTTCCACTAAGTCCGGCGGTGGTTCCGGAGGTTTGGTTCCTTCGAAGTCTACTGTCTATGTTTCCAATTTCGACTATTCACTCACTAATTCCGACCTCCACACTCTCTTCTCCACCTTTGGTAAGATCGCTCGTGTTACGGTGTTGAAAGATAGACAGACTCGCAAGTCTCGCGGCGTTGCCTTCGTGCAGTTTATTTCTCAGGACGACGCGGTGAAGGCCGCGAAACAGATGCACGGGAAGATTTTGAATGGCCGTGTTCTTAAGGCTGCTATAGCGACTGATAATGGTCGCGCCGCTGAGTTTATAAGGAAGAGGGTTTATAAGGATAAGAGTAGGTGCTACGAGTGCGGCGCAGTTGATGGGCATTTGTCTTATGAATGCCCTAAAAATCAATTGGGGCCAAGGGAGCGACCAGAACCGAAGCGAGGGAGAAGGGGTGGAGTTGGTGCTAGGCACGAGGAGGATTGGGGATCGGATGTTGGAGAAGCGTTTGAGGATGACAATTGGGCCTCGGTGGTGGACGGAGATGCAGACCAGAGACTCCTGACTGGCGGTGAGAACATTGTAGAGAAGAAAAAGGCGAAGAAAGCAAGTTATTTCAGTGACGAGAGCGGCGAAGATGATTAA

Protein sequence

MARKGKKTNNPTSDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSHSHSSTKSGGGSGGLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYECPKNQLGPRERPEPKRGRRGGVGARHEEDWGSDVGEAFEDDNWASVVDGDADQRLLTGGENIVEKKKAKKASYFSDESGEDD*
Homology
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BLAST of MELO3C019829 vs. Swiss-Prot
Match: U1131_ARATH (U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Arabidopsis thaliana GN=SNRNP31 PE=2 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.9e-78
Identity = 164/267 (61.42%), Postives = 189/267 (70.79%), Query Frame = 1 

Query: 6   KKTNNPTSDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSHSHSSTKSGGGSGGLVPS 65
           KK     SD +ED+TFYYRY S A  APP PS+ +   SS   S  S+  GGGSGGL PS
Sbjct: 2   KKRKIHHSDDEEDDTFYYRYSSVA--APP-PSNPKHQPSS---SAKSSAPGGGSGGLAPS 61

Query: 66  KSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAA 125
           KST+YVSN D+SLTNSD+HTLFSTFGK+ARVTVLKDR TR+SRGVAFV ++S++DA KAA
Sbjct: 62  KSTLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAA 121

Query: 126 KQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYECPKNQLGP 185
           + M  KILNGR L  +IA DNGRA+EFI+KRVYKDKSRCYECG  +GHLSYECPKNQLGP
Sbjct: 122 RSMDAKILNGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGD-EGHLSYECPKNQLGP 181

Query: 186 RERPEP--KRGRR-GGVGARHEEDWGSD------VGEAFEDDNWASVVDGDADQRLLTGG 245
           RERP P  KRGRR    G   E  W +         E FE++NWASVVD +A +RL    
Sbjct: 182 RERPPPPKKRGRRKEEEGEAEEISWSAAAPSLAVAEEEFEEENWASVVDNEAGERLRKRE 241

Query: 246 ENIVE----KKKAKKASYFSDESGEDD 260
               E    K+K KK SYFSDES ++D
Sbjct: 242 AEEEEERRMKRKEKKVSYFSDESDDED 261

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BLAST of MELO3C019829 vs. Swiss-Prot
Match: ZCRB1_RAT (Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Rattus norvegicus GN=Zcrb1 PE=2 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.5e-45
Identity = 102/217 (47.00%), Postives = 136/217 (62.67%), Query Frame = 1 

Query: 59  SGGLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ 118
           SGGL PSKSTVYVSN  +SLTN+DL+ +FS +GK+ +VT++KD+ TRKS+GVAF+ F+ +
Sbjct: 2   SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDK 61

Query: 119 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 178
           D A+   + ++ K L GRV+KA+IA DNGRAAEFIR+R Y DKS+CYECG   GHLSY C
Sbjct: 62  DSALNCTRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGE-SGHLSYAC 121

Query: 179 PKNQLGPRERPEPK-RGRRGGVGARHEEDWGSDVGEAFEDD------------NWASVVD 238
           PKN LG RE P+ K + ++  V    EE    +V E   +D              A + +
Sbjct: 122 PKNMLGEREPPKKKEKKKKKKVPEPEEEIEEVEVSEEEGEDPALDSLSQAIAFQQAKIEE 181

Query: 239 GDADQRLLTGGENIVE---KKKAKKASYFSDESGEDD 260
                R  TGG +  +   + + KK++YFSDE    D
Sbjct: 182 EQNKWRPSTGGPSTSDDSRRPRIKKSAYFSDEEELSD 217

[Close]
BLAST of MELO3C019829 vs. Swiss-Prot
Match: ZCRB1_MOUSE (Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Mus musculus GN=Zcrb1 PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.6e-44
Identity = 100/217 (46.08%), Postives = 136/217 (62.67%), Query Frame = 1 

Query: 59  SGGLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ 118
           SGGL PSKSTVYVSN  +SLTN+DL+ +FS +GK+ +VT++KD+ TRKS+GVAF+ F+ +
Sbjct: 2   SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDK 61

Query: 119 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 178
           D A+   + ++ K L GRV+KA+IA DNGRAAEFIR+R Y DKS+CYECG   GHLSY C
Sbjct: 62  DSALNCTRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGE-SGHLSYAC 121

Query: 179 PKNQLGPRERPEPK-RGRRGGVGARHEEDWGSDVGEAFEDD------------NWASVVD 238
           PKN LG RE P+ K + ++  +    EE    +V E   +D              A + +
Sbjct: 122 PKNMLGEREPPKKKEKKKKRKLPEPEEEIEEVEVSEEEGEDPALDSLSQAIAFQQAKIEE 181

Query: 239 GDADQRLLTGGENIVE---KKKAKKASYFSDESGEDD 260
             +  R   GG +  +   + + KK++YFSDE    D
Sbjct: 182 EQSKWRPNPGGPSTSDDSRRPRIKKSAYFSDEEELSD 217

[Close]
BLAST of MELO3C019829 vs. Swiss-Prot
Match: ZCRB1_DANRE (Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Danio rerio GN=zcrb1 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.8e-44
Identity = 103/218 (47.25%), Postives = 130/218 (59.63%), Query Frame = 1 

Query: 59  SGGLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ 118
           SGGL PSKSTVYVSN  +SLTNSD+H L S +GK+ +VT++KD+ TR S+GVAFV F+ +
Sbjct: 2   SGGLAPSKSTVYVSNIPFSLTNSDMHKLCSKYGKVVKVTIVKDKHTRMSKGVAFVLFLDR 61

Query: 119 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 178
           + A   ++ ++ K L GR++KA+IA DNGRAAEFIRKR Y DKS+CYECG  +GHLSY C
Sbjct: 62  ESAYNCSRSLNNKQLFGRMVKASIAIDNGRAAEFIRKRNYTDKSKCYECGE-EGHLSYAC 121

Query: 179 PKNQLGPRERPEPKRGRRGGVGARHEEDWGSDVGEAFEDDNWASVVDGDADQRLLTGGEN 238
           PKN LG RE P  K  ++     + EE    D  E  ED    S+    A Q+     E 
Sbjct: 122 PKNLLGEREPPPKKEKKKKKKVQQPEEVEPEDSEEEGEDPALDSLSQAIAFQQARIEEEE 181

Query: 239 IVEKKKA-----------------KKASYFSDESGEDD 260
              K+ A                 KK++YFSDE    D
Sbjct: 182 KRRKQAAEDASQASTSEDTHKPRIKKSAYFSDEEELSD 218

[Close]
BLAST of MELO3C019829 vs. Swiss-Prot
Match: ZCRB1_HUMAN (Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Homo sapiens GN=ZCRB1 PE=1 SV=2)

HSP 1 Score: 179.5 bits (454), Expect = 4.8e-44
Identity = 100/219 (45.66%), Postives = 131/219 (59.82%), Query Frame = 1 

Query: 59  SGGLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQ 118
           SGGL PSKSTVYVSN  +SLTN+DL+ +FS +GK+ +VT++KD+ TRKS+GVAF+ F+ +
Sbjct: 2   SGGLAPSKSTVYVSNLPFSLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDK 61

Query: 119 DDAVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYEC 178
           D A    + ++ K L GRV+KA+IA DNGRAAEFIR+R Y DKS+CYECG   GHLSY C
Sbjct: 62  DSAQNCTRAINNKQLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGE-SGHLSYAC 121

Query: 179 PKNQLGPRERPEPKRGRRGGVGARHEEDWGSDVGEAFEDDNWASVVDGDADQRLLTGGEN 238
           PKN LG RE P+ K  ++       EE+   +  E  ED+     +D  +        + 
Sbjct: 122 PKNMLGEREPPKKKEKKKKKKAPEPEEE--IEEVEESEDEGEDPALDSLSQAIAFQQAKI 181

Query: 239 IVEKKK------------------AKKASYFSDESGEDD 260
             E+KK                   KK++YFSDE    D
Sbjct: 182 EEEQKKWKPSSGVPSTSDDSRRPRIKKSTYFSDEEELSD 217

[Close]
BLAST of MELO3C019829 vs. TrEMBL
Match: W9RLG6_9ROSA (Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Morus notabilis GN=L484_017050 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.5e-89
Identity = 178/272 (65.44%), Postives = 208/272 (76.47%), Query Frame = 1 

Query: 3   RKGKKTNNPTSDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSHSHSSTKSGGGSGGL 62
           +K  K NNPT   D+D+TFYYRY SAA++ P    ++ S  +++ HS      GGGSG L
Sbjct: 96  KKTTKKNNPTDSDDDDDTFYYRYASAAANPPDGAGATTS--AAKKHSGG----GGGSGTL 155

Query: 63  VPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAV 122
            PSKST+YVSN D++LTNSDLHTLFSTFGKIARV+VLKDR TR+SRGVAFVQF+S+DDAV
Sbjct: 156 APSKSTLYVSNIDFALTNSDLHTLFSTFGKIARVSVLKDRHTRQSRGVAFVQFVSRDDAV 215

Query: 123 KAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYECPKNQ 182
            AA QMHGK+LNGR L A+IA DNGR+AEFIRKRVY+DKSRCYECGA +GHLSYECPKNQ
Sbjct: 216 FAASQMHGKVLNGRTLTASIAADNGRSAEFIRKRVYRDKSRCYECGA-EGHLSYECPKNQ 275

Query: 183 LGPRERPEPK--RGRRGGVGA------------RHEEDWGSDVGEAFEDDNWASVVDGDA 242
           LGPRERP PK  RGR GG G               +E+ G D GE FE+DNWASVVDG A
Sbjct: 276 LGPRERPPPKRERGRGGGGGGGGGRGTNCWRENEQDEEIGPDGGEGFEEDNWASVVDGGA 335

Query: 243 DQRLL-TGGENIVEKKKAKKASYFSDESGEDD 260
           D RLL + G+   EKK+ KKASYFSDESG+D+
Sbjct: 336 DDRLLRSRGDGGQEKKRMKKASYFSDESGDDE 360

[Close]
BLAST of MELO3C019829 vs. TrEMBL
Match: A0A0D2TUZ0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G310500 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 7.6e-89
Identity = 182/264 (68.94%), Postives = 203/264 (76.89%), Query Frame = 1 

Query: 4   KGKKTNNPTSDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSHSHSSTKSGGGSGGLV 63
           K K T N  SDSDEDETFY+RY SA   APP  SSS  + ++      ST  GGGSGGL 
Sbjct: 2   KRKSTKN--SDSDEDETFYFRYSSAV--APPSSSSSNPNLATSK----STGGGGGSGGLA 61

Query: 64  PSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVK 123
           PSKST+YVSN DYSLTNSDLHTLFSTFGKIARVTVLKDR TR S+GVAFVQF+S++DA+ 
Sbjct: 62  PSKSTLYVSNLDYSLTNSDLHTLFSTFGKIARVTVLKDRATRNSKGVAFVQFVSREDALS 121

Query: 124 AAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYECPKNQL 183
           AA  MHGKILNGR L A+IA DNGRA EFI+KRVYKDKSRCYECGA  GHLSYECPKNQL
Sbjct: 122 AASVMHGKILNGRTLSASIAVDNGRAPEFIKKRVYKDKSRCYECGA-GGHLSYECPKNQL 181

Query: 184 GPRERPEPKRGRRGGVGARHEE---DWG---SDVGEAFEDDNWASVVDGDADQRLLTGGE 243
           GPRERP PK+GRRGG G    E   DWG   S+ GE FE++NWASVVDG A++R L   E
Sbjct: 182 GPRERPVPKKGRRGGGGGEKREDGGDWGEEESEGGEGFEEENWASVVDGAAEER-LRKSE 241

Query: 244 NIVEKKK--AKKASYFSDESGEDD 260
              EKKK   +KASYFSDES E++
Sbjct: 242 MAEEKKKKMTRKASYFSDESDEEE 255

[Close]
BLAST of MELO3C019829 vs. TrEMBL
Match: A0A067KDZ5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16159 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.7e-85
Identity = 171/248 (68.95%), Postives = 194/248 (78.23%), Query Frame = 1 

Query: 13  SDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSHSHSSTKSGGGSGGLVPSKSTVYVS 72
           SDSDEDETFYYRY    SSAP  PSSS       S+         GS GL PSKST+YVS
Sbjct: 7   SDSDEDETFYYRY----SSAPQPPSSS-------SNPSKPNPKSNGSDGLAPSKSTLYVS 66

Query: 73  NFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKI 132
           N DYSLTNSDLHTLFSTFGKIARVTVLKDR +R+S+GVAF+QF+S++DAV AA+QM  KI
Sbjct: 67  NLDYSLTNSDLHTLFSTFGKIARVTVLKDRVSRQSKGVAFIQFVSRNDAVSAARQMDKKI 126

Query: 133 LNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYECPKNQLGPRERPEPK 192
           LNGR L A+IA DNGRA EFI+KRVYKDKSRCYECG  +GHLSYECP+NQLG RERP  K
Sbjct: 127 LNGRTLSASIAADNGRAPEFIKKRVYKDKSRCYECGE-NGHLSYECPRNQLGARERPVAK 186

Query: 193 RGRRGGVGARHEEDWGSDVGEAFEDDNWASVVDGDADQRLLTGGENI-VEKKKAKKASYF 252
           RGR  G   R EE+W  + GE FE++NWASVVDGDAD+RLL+ GE   VE+KK KKASYF
Sbjct: 187 RGRGDGGQGRREEEW--EDGEVFEEENWASVVDGDADERLLSRGEETKVERKKVKKASYF 240

Query: 253 SDESGEDD 260
           SDES E++
Sbjct: 247 SDESDEEE 240

[Close]
BLAST of MELO3C019829 vs. TrEMBL
Match: A0A061FPI6_THECC (RNA recognition motif and CCHC-type zinc finger domains containing protein OS=Theobroma cacao GN=TCM_043293 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.7e-85
Identity = 179/267 (67.04%), Postives = 204/267 (76.40%), Query Frame = 1 

Query: 1   MARKGKKTNNPTSDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSHSHSSTKSGGGSG 60
           M  K K T+N  SDS+EDETFY+RY SAA  APP  SSS+    +Q+ S   T  GGGS 
Sbjct: 1   MTLKRKSTSN--SDSEEDETFYFRYSSAA--APPSSSSSKPSNPNQTIS-KCTGGGGGSS 60

Query: 61  GLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDD 120
           GL PSKST+YVSN DYSLTNSDLHTLFSTFGKIARVTVLKD  TR S+GVAF+QF+S+DD
Sbjct: 61  GLAPSKSTLYVSNIDYSLTNSDLHTLFSTFGKIARVTVLKDSVTRISKGVAFIQFVSRDD 120

Query: 121 AVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYECPK 180
           A+ A + MHGK+LNGR L  +IA DNGRA EFIRKRVYKDKSRCYECG V GHLSYECPK
Sbjct: 121 ALSAERVMHGKVLNGRTLSTSIAVDNGRAPEFIRKRVYKDKSRCYECG-VSGHLSYECPK 180

Query: 181 NQLGPRERPEPKRGRRG-GVGARHEE--DWGS---DVGEAFEDDNWASVVDGDADQRLLT 240
           NQLGPRERP  K+GRRG G G R E+  DW     D G  FE++NWASVVDG A++R L 
Sbjct: 181 NQLGPRERPVSKKGRRGCGGGERREDNGDWSDEELDGGVGFEEENWASVVDGSAEER-LR 240

Query: 241 GGENIVEKKK--AKKASYFSDESGEDD 260
             E + EKKK  A+KASYFSDES E++
Sbjct: 241 KAEMVEEKKKKVARKASYFSDESDEEE 260

[Close]
BLAST of MELO3C019829 vs. TrEMBL
Match: A0A061FNC2_THECC (RNA recognition motif and CCHC-type zinc finger domains containing protein OS=Theobroma cacao GN=TCM_043295 PE=4 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 1.7e-85
Identity = 177/267 (66.29%), Postives = 203/267 (76.03%), Query Frame = 1 

Query: 1   MARKGKKTNNPTSDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSHSHSSTKSGGGSG 60
           M +K K T N  SDS+EDETFY+RY S A  APP  SSS  +      +  ST  GGGS 
Sbjct: 1   MTQKRKSTTN--SDSEEDETFYFRYSSVA--APPSSSSSNPN----QITSKSTGGGGGSS 60

Query: 61  GLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDD 120
           GL PSKST+YVSN DYSLTNSDLHTLFSTFGKIARV+VLKDR TRK +GVAF+QF+S+D 
Sbjct: 61  GLAPSKSTLYVSNLDYSLTNSDLHTLFSTFGKIARVSVLKDRVTRKPKGVAFIQFVSRDG 120

Query: 121 AVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYECPK 180
           A+ A + MHGK+LNGR L A+IA DNGRA EFIRKRVYKDKSRCYECG V GHLSYECPK
Sbjct: 121 ALSAERVMHGKVLNGRTLSASIAIDNGRAPEFIRKRVYKDKSRCYECG-VTGHLSYECPK 180

Query: 181 NQLGPRERPEPKRGRRG-GVGARHEE--DWG---SDVGEAFEDDNWASVVDGDADQRLLT 240
           NQLGPRERP PK+GRRG G G R E+  DW    SD G+ FE++NWASVVDG A++R L 
Sbjct: 181 NQLGPRERPVPKKGRRGCGGGERREDNGDWADEESDGGDGFEEENWASVVDGAAEER-LR 240

Query: 241 GGENIVEKKK--AKKASYFSDESGEDD 260
             E + EKKK   +K SYFSDES E++
Sbjct: 241 KAEMVEEKKKKVTRKVSYFSDESDEEE 257

[Close]
BLAST of MELO3C019829 vs. TAIR10
Match: AT3G10400.1 (AT3G10400.1 RNA recognition motif and CCHC-type zinc finger domains containing protein)

HSP 1 Score: 292.7 bits (748), Expect = 2.2e-79
Identity = 164/267 (61.42%), Postives = 189/267 (70.79%), Query Frame = 1 

Query: 6   KKTNNPTSDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSHSHSSTKSGGGSGGLVPS 65
           KK     SD +ED+TFYYRY S A  APP PS+ +   SS   S  S+  GGGSGGL PS
Sbjct: 2   KKRKIHHSDDEEDDTFYYRYSSVA--APP-PSNPKHQPSS---SAKSSAPGGGSGGLAPS 61

Query: 66  KSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAA 125
           KST+YVSN D+SLTNSD+HTLFSTFGK+ARVTVLKDR TR+SRGVAFV ++S++DA KAA
Sbjct: 62  KSTLYVSNLDFSLTNSDIHTLFSTFGKVARVTVLKDRHTRQSRGVAFVLYVSREDAAKAA 121

Query: 126 KQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYECPKNQLGP 185
           + M  KILNGR L  +IA DNGRA+EFI+KRVYKDKSRCYECG  +GHLSYECPKNQLGP
Sbjct: 122 RSMDAKILNGRKLTVSIAADNGRASEFIKKRVYKDKSRCYECGD-EGHLSYECPKNQLGP 181

Query: 186 RERPEP--KRGRR-GGVGARHEEDWGSD------VGEAFEDDNWASVVDGDADQRLLTGG 245
           RERP P  KRGRR    G   E  W +         E FE++NWASVVD +A +RL    
Sbjct: 182 RERPPPPKKRGRRKEEEGEAEEISWSAAAPSLAVAEEEFEEENWASVVDNEAGERLRKRE 241

Query: 246 ENIVE----KKKAKKASYFSDESGEDD 260
               E    K+K KK SYFSDES ++D
Sbjct: 242 AEEEEERRMKRKEKKVSYFSDESDDED 261

[Close]
BLAST of MELO3C019829 vs. TAIR10
Match: AT3G23830.1 (AT3G23830.1 glycine-rich RNA-binding protein 4)

HSP 1 Score: 68.9 bits (167), Expect = 5.1e-12
Identity = 34/90 (37.78%), Postives = 50/90 (55.56%), Query Frame = 1 

Query: 60  GGLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQD 119
           G L    S ++V    +   +S L   F++FG++   TV+ DR+T +SRG  FV F  +D
Sbjct: 28  GSLRYMSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCED 87

Query: 120 DAVKAAKQMHGKILNGRVLKAAIATDNGRA 150
            A  A K+M GK LNGR ++  +AT+   A
Sbjct: 88  SANNAIKEMDGKELNGRQIRVNLATERSSA 117

[Close]
BLAST of MELO3C019829 vs. TAIR10
Match: AT5G64200.1 (AT5G64200.1 ortholog of human splicing factor SC35)

HSP 1 Score: 65.5 bits (158), Expect = 5.7e-11
Identity = 37/128 (28.91%), Postives = 64/128 (50.00%), Query Frame = 1 

Query: 68  TVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQ 127
           ++ V N  +  T  DL+ LF+ +GK+  V + +DR+T  SRG AFV++  +D+A KA ++
Sbjct: 17  SLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFAFVRYKYKDEAHKAVER 76

Query: 128 MHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYECPKNQLGPRE 187
           + G++++GR +    A     A +  + RV +   +     +     S   P+    P  
Sbjct: 77  LDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSRRSRSRSPRRS-RSPRRSRSPPR 136

Query: 188 RPEPKRGR 196
           R  P+R R
Sbjct: 137 RRSPRRSR 143

[Close]
BLAST of MELO3C019829 vs. TAIR10
Match: AT4G20030.1 (AT4G20030.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 65.5 bits (158), Expect = 5.7e-11
Identity = 41/124 (33.06%), Postives = 59/124 (47.58%), Query Frame = 1 

Query: 25  YPSAASSAPPLPSSSQSHFSSQSHSHSSTKSGGGSGGLVPSKSTVYVSNFDYSLTNSDLH 84
           +PS  +S+  LP+     F     S  +           P  S + V N  +S +   L 
Sbjct: 8   FPSFVASSSSLPNYRNLRFPKIKASLFN----------YPLASKIMVRNLPFSTSEDFLK 67

Query: 85  TLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKILNGRVLKAAIAT 144
             FS FG+IA V ++KD   ++S+G AF+QF SQDDA  A + M  ++ NGR++   IA 
Sbjct: 68  REFSAFGEIAEVKLIKDEAMKRSKGYAFIQFTSQDDAFLAIETMDRRMYNGRMIYIDIAK 121

Query: 145 DNGR 149
              R
Sbjct: 128 PGKR 121

[Close]
BLAST of MELO3C019829 vs. TAIR10
Match: AT5G59950.5 (AT5G59950.5 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 64.7 bits (156), Expect = 9.6e-11
Identity = 46/146 (31.51%), Postives = 69/146 (47.26%), Query Frame = 1 

Query: 7   KTNNPTSDSDEDETFYYRYPSAASSAPPLPSSSQSH--FSSQSHSHSSTKSGGGSGGLVP 66
           + NNP   S           SA   +   P S+  H  FS +S  H S +S  G    + 
Sbjct: 39  RRNNPNRKSTR---------SAPYQSAKAPESTWGHDMFSDRSEDHRSGRSSAG----IE 98

Query: 67  SKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKA 126
           + + +Y+SN DY + N D+  LF+  G++ R TV  DR  R S+G A V +  + DA+ A
Sbjct: 99  TGTKLYISNLDYGVMNEDIKELFAEVGELKRYTVHFDRSGR-SKGTAEVVYSRRGDALAA 158

Query: 127 AKQMHGKILNGRVLKAAIATDNGRAA 151
            K+ +   L+G+ +K  I   N + A
Sbjct: 159 VKKYNDVQLDGKPMKIEIVGTNLQTA 170

[Close]
BLAST of MELO3C019829 vs. NCBI nr
Match: gi|659113349|ref|XP_008456528.1| (PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing protein 1 [Cucumis melo])

HSP 1 Score: 526.6 bits (1355), Expect = 2.5e-146
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 1 

Query: 1   MARKGKKTNNPTSDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSHSHSSTKSGGGSG 60
           MARKGKKTNNPTSDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSHSHSSTKSGGGSG
Sbjct: 1   MARKGKKTNNPTSDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSHSHSSTKSGGGSG 60

Query: 61  GLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDD 120
           GLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDD
Sbjct: 61  GLVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDD 120

Query: 121 AVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYECPK 180
           AVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYECPK
Sbjct: 121 AVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYECPK 180

Query: 181 NQLGPRERPEPKRGRRGGVGARHEEDWGSDVGEAFEDDNWASVVDGDADQRLLTGGENIV 240
           NQLGPRERPEPKRGRRGGVGARHEEDWGSDVGEAFEDDNWASVVDGDADQRLLTGGENIV
Sbjct: 181 NQLGPRERPEPKRGRRGGVGARHEEDWGSDVGEAFEDDNWASVVDGDADQRLLTGGENIV 240

Query: 241 EKKKAKKASYFSDESGEDD 260
           EKKKAKKASYFSDESGEDD
Sbjct: 241 EKKKAKKASYFSDESGEDD 259

[Close]
BLAST of MELO3C019829 vs. NCBI nr
Match: gi|703126292|ref|XP_010103541.1| (Zinc finger CCHC-type and RNA-binding motif-containing protein 1 [Morus notabilis])

HSP 1 Score: 337.4 bits (864), Expect = 2.2e-89
Identity = 178/272 (65.44%), Postives = 208/272 (76.47%), Query Frame = 1 

Query: 3   RKGKKTNNPTSDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSHSHSSTKSGGGSGGL 62
           +K  K NNPT   D+D+TFYYRY SAA++ P    ++ S  +++ HS      GGGSG L
Sbjct: 96  KKTTKKNNPTDSDDDDDTFYYRYASAAANPPDGAGATTS--AAKKHSGG----GGGSGTL 155

Query: 63  VPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAV 122
            PSKST+YVSN D++LTNSDLHTLFSTFGKIARV+VLKDR TR+SRGVAFVQF+S+DDAV
Sbjct: 156 APSKSTLYVSNIDFALTNSDLHTLFSTFGKIARVSVLKDRHTRQSRGVAFVQFVSRDDAV 215

Query: 123 KAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYECPKNQ 182
            AA QMHGK+LNGR L A+IA DNGR+AEFIRKRVY+DKSRCYECGA +GHLSYECPKNQ
Sbjct: 216 FAASQMHGKVLNGRTLTASIAADNGRSAEFIRKRVYRDKSRCYECGA-EGHLSYECPKNQ 275

Query: 183 LGPRERPEPK--RGRRGGVGA------------RHEEDWGSDVGEAFEDDNWASVVDGDA 242
           LGPRERP PK  RGR GG G               +E+ G D GE FE+DNWASVVDG A
Sbjct: 276 LGPRERPPPKRERGRGGGGGGGGGRGTNCWRENEQDEEIGPDGGEGFEEDNWASVVDGGA 335

Query: 243 DQRLL-TGGENIVEKKKAKKASYFSDESGEDD 260
           D RLL + G+   EKK+ KKASYFSDESG+D+
Sbjct: 336 DDRLLRSRGDGGQEKKRMKKASYFSDESGDDE 360

[Close]
BLAST of MELO3C019829 vs. NCBI nr
Match: gi|823229932|ref|XP_012447703.1| (PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Gossypium raimondii])

HSP 1 Score: 335.1 bits (858), Expect = 1.1e-88
Identity = 182/264 (68.94%), Postives = 203/264 (76.89%), Query Frame = 1 

Query: 4   KGKKTNNPTSDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSHSHSSTKSGGGSGGLV 63
           K K T N  SDSDEDETFY+RY SA   APP  SSS  + ++      ST  GGGSGGL 
Sbjct: 2   KRKSTKN--SDSDEDETFYFRYSSAV--APPSSSSSNPNLATSK----STGGGGGSGGLA 61

Query: 64  PSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVK 123
           PSKST+YVSN DYSLTNSDLHTLFSTFGKIARVTVLKDR TR S+GVAFVQF+S++DA+ 
Sbjct: 62  PSKSTLYVSNLDYSLTNSDLHTLFSTFGKIARVTVLKDRATRNSKGVAFVQFVSREDALS 121

Query: 124 AAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYECPKNQL 183
           AA  MHGKILNGR L A+IA DNGRA EFI+KRVYKDKSRCYECGA  GHLSYECPKNQL
Sbjct: 122 AASVMHGKILNGRTLSASIAVDNGRAPEFIKKRVYKDKSRCYECGA-GGHLSYECPKNQL 181

Query: 184 GPRERPEPKRGRRGGVGARHEE---DWG---SDVGEAFEDDNWASVVDGDADQRLLTGGE 243
           GPRERP PK+GRRGG G    E   DWG   S+ GE FE++NWASVVDG A++R L   E
Sbjct: 182 GPRERPVPKKGRRGGGGGEKREDGGDWGEEESEGGEGFEEENWASVVDGAAEER-LRKSE 241

Query: 244 NIVEKKK--AKKASYFSDESGEDD 260
              EKKK   +KASYFSDES E++
Sbjct: 242 MAEEKKKKMTRKASYFSDESDEEE 255

[Close]
BLAST of MELO3C019829 vs. NCBI nr
Match: gi|1009119832|ref|XP_015876595.1| (PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Ziziphus jujuba])

HSP 1 Score: 325.9 bits (834), Expect = 6.6e-86
Identity = 177/266 (66.54%), Postives = 205/266 (77.07%), Query Frame = 1 

Query: 4   KGKKTNNPTSDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSHSHSSTKSGGGSGG-- 63
           K KK ++  SDSD+D TFYYRY SA   APP  S++QS       + +++   GGS    
Sbjct: 7   KNKKDSDNNSDSDDD-TFYYRYSSAP--APPSFSAAQSPRHKNPTTITTSIINGGSSSSS 66

Query: 64  -LVPSKSTVYVSNFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDD 123
            L PSKST+YVSN DYSLTNSDLHTLFSTFGKIARVT+LK R TR SRGVAF+QF+S++D
Sbjct: 67  SLAPSKSTIYVSNLDYSLTNSDLHTLFSTFGKIARVTILKHRDTRLSRGVAFIQFVSRND 126

Query: 124 AVKAAKQMHGKILNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYECPK 183
           A  AA+QMHGKILNGR L A+IA DNGRA EFIRKRVY+DKS+CYECG V+GHLSYECPK
Sbjct: 127 AASAARQMHGKILNGRKLVASIAADNGRAPEFIRKRVYRDKSQCYECG-VEGHLSYECPK 186

Query: 184 NQLGPRERPEPKRGRRGG-VGARHEEDWGSDV----GEAFEDDNWASVVDGDADQRLLTG 243
           NQLGPRERP PKRGR+GG  G   +ED G D+    GE FEDDNWASVVDG A++RLL G
Sbjct: 187 NQLGPRERPVPKRGRKGGWSGGGKKEDEGEDLVDDGGEGFEDDNWASVVDGGANERLLKG 246

Query: 244 GENIV--EKKKAKKASYFSDESGEDD 260
            +N V  E+KK KKASYFSDES  D+
Sbjct: 247 SDNGVMEERKKMKKASYFSDESDGDE 268

[Close]
BLAST of MELO3C019829 vs. NCBI nr
Match: gi|802660682|ref|XP_012080966.1| (PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Jatropha curcas])

HSP 1 Score: 323.9 bits (829), Expect = 2.5e-85
Identity = 171/248 (68.95%), Postives = 194/248 (78.23%), Query Frame = 1 

Query: 13  SDSDEDETFYYRYPSAASSAPPLPSSSQSHFSSQSHSHSSTKSGGGSGGLVPSKSTVYVS 72
           SDSDEDETFYYRY    SSAP  PSSS       S+         GS GL PSKST+YVS
Sbjct: 7   SDSDEDETFYYRY----SSAPQPPSSS-------SNPSKPNPKSNGSDGLAPSKSTLYVS 66

Query: 73  NFDYSLTNSDLHTLFSTFGKIARVTVLKDRQTRKSRGVAFVQFISQDDAVKAAKQMHGKI 132
           N DYSLTNSDLHTLFSTFGKIARVTVLKDR +R+S+GVAF+QF+S++DAV AA+QM  KI
Sbjct: 67  NLDYSLTNSDLHTLFSTFGKIARVTVLKDRVSRQSKGVAFIQFVSRNDAVSAARQMDKKI 126

Query: 133 LNGRVLKAAIATDNGRAAEFIRKRVYKDKSRCYECGAVDGHLSYECPKNQLGPRERPEPK 192
           LNGR L A+IA DNGRA EFI+KRVYKDKSRCYECG  +GHLSYECP+NQLG RERP  K
Sbjct: 127 LNGRTLSASIAADNGRAPEFIKKRVYKDKSRCYECGE-NGHLSYECPRNQLGARERPVAK 186

Query: 193 RGRRGGVGARHEEDWGSDVGEAFEDDNWASVVDGDADQRLLTGGENI-VEKKKAKKASYF 252
           RGR  G   R EE+W  + GE FE++NWASVVDGDAD+RLL+ GE   VE+KK KKASYF
Sbjct: 187 RGRGDGGQGRREEEW--EDGEVFEEENWASVVDGDADERLLSRGEETKVERKKVKKASYF 240

Query: 253 SDESGEDD 260
           SDES E++
Sbjct: 247 SDESDEEE 240

The following BLAST results are available for this feature:
BLAST of MELO3C019829 vs. Swiss-Prot
Match NameE-valueIdentityDescription
U1131_ARATH3.9e-7861.42U11/U12 small nuclear ribonucleoprotein 31 kDa protein OS=Arabidopsis thaliana G... [more]
ZCRB1_RAT2.5e-4547.00Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Rattus norve... [more]
ZCRB1_MOUSE1.6e-4446.08Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Mus musculus... [more]
ZCRB1_DANRE2.8e-4447.25Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Danio rerio ... [more]
ZCRB1_HUMAN4.8e-4445.66Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Homo sapiens... [more]
BLAST of MELO3C019829 vs. TrEMBL
Match NameE-valueIdentityDescription
W9RLG6_9ROSA1.5e-8965.44Zinc finger CCHC-type and RNA-binding motif-containing protein 1 OS=Morus notabi... [more]
A0A0D2TUZ0_GOSRA7.6e-8968.94Uncharacterized protein OS=Gossypium raimondii GN=B456_009G310500 PE=4 SV=1[more]
A0A067KDZ5_JATCU1.7e-8568.95Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16159 PE=4 SV=1[more]
A0A061FPI6_THECC1.7e-8567.04RNA recognition motif and CCHC-type zinc finger domains containing protein OS=Th... [more]
A0A061FNC2_THECC1.7e-8566.29RNA recognition motif and CCHC-type zinc finger domains containing protein OS=Th... [more]
BLAST of MELO3C019829 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G10400.12.2e-7961.42 RNA recognition motif and CCHC-type zinc finger domains containing p... [more]
AT3G23830.15.1e-1237.78 glycine-rich RNA-binding protein 4[more]
AT5G64200.15.7e-1128.91 ortholog of human splicing factor SC35[more]
AT4G20030.15.7e-1133.06 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT5G59950.59.6e-1131.51 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
BLAST of MELO3C019829 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659113349|ref|XP_008456528.1|2.5e-146100.00PREDICTED: zinc finger CCHC-type and RNA-binding motif-containing protein 1 [Cuc... [more]
gi|703126292|ref|XP_010103541.1|2.2e-8965.44Zinc finger CCHC-type and RNA-binding motif-containing protein 1 [Morus notabili... [more]
gi|823229932|ref|XP_012447703.1|1.1e-8868.94PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa protein-like [Gossypiu... [more]
gi|1009119832|ref|XP_015876595.1|6.6e-8666.54PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Ziziphus juju... [more]
gi|802660682|ref|XP_012080966.1|2.5e-8568.95PREDICTED: U11/U12 small nuclear ribonucleoprotein 31 kDa protein [Jatropha curc... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR001878Znf_CCHC
IPR003954RRM_dom_euk
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0008270zinc ion binding
GO:0000166nucleotide binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009987 cellular process
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0005575 cellular_component
cellular_component GO:0005689 U12-type spliceosomal complex
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:1901363 heterocyclic compound binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0097159 organic cyclic compound binding
molecular_function GO:0003723 RNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU65969melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019829T1MELO3C019829T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU65969MU65969transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 69..139
score: 6.9
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 68..141
score: 9.0
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 67..145
score: 18
IPR001878Zinc finger, CCHC-typeGENE3DG3DSA:4.10.60.10coord: 159..182
score: 0
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 68..141
score: 1.
IPR012677Nucleotide-binding alpha-beta plait domainGENE3DG3DSA:3.30.70.330coord: 46..146
score: 8.0E-29coord: 190..199
score: 8.0
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 11..143
score: 4.97
NoneNo IPR availablePANTHERPTHR23139RNA-BINDING PROTEINcoord: 56..195
score: 2.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C019829Cla013743Watermelon (97103) v1mewmB308
MELO3C019829ClCG08G007750Watermelon (Charleston Gray)mewcgB300
MELO3C019829Cla97C08G150530Watermelon (97103) v2mewmbB307
MELO3C019829Bhi04G001062Wax gourdmewgoB327
MELO3C019829CSPIUnG00650Wild cucumber (PI 183967)cpimeB087
MELO3C019829Cucsa.317330Cucumber (Gy14) v1cgymeB522
MELO3C019829CmaCh15G005030Cucurbita maxima (Rimu)cmameB269
MELO3C019829CmoCh15G005120Cucurbita moschata (Rifu)cmomeB260
MELO3C019829Lsi08G006970Bottle gourd (USVL1VR-Ls)lsimeB470
MELO3C019829Cp4.1LG13g10350Cucurbita pepo (Zucchini)cpemeB169
MELO3C019829Carg01693Silver-seed gourdcarmeB0825
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C019829Silver-seed gourdcarmeB0490
MELO3C019829Silver-seed gourdcarmeB0686
MELO3C019829Silver-seed gourdcarmeB0836
MELO3C019829Cucumber (Chinese Long) v3cucmeB403
MELO3C019829Watermelon (97103) v2mewmbB291
MELO3C019829Watermelon (97103) v2mewmbB299
MELO3C019829Wax gourdmewgoB361
MELO3C019829Melon (DHL92) v3.5.1memeB030
MELO3C019829Cucumber (Gy14) v1cgymeB190
MELO3C019829Cucumber (Gy14) v1cgymeB509
MELO3C019829Cucurbita maxima (Rimu)cmameB273
MELO3C019829Cucurbita maxima (Rimu)cmameB374
MELO3C019829Cucurbita maxima (Rimu)cmameB595
MELO3C019829Cucurbita maxima (Rimu)cmameB675
MELO3C019829Cucurbita maxima (Rimu)cmameB784
MELO3C019829Cucurbita moschata (Rifu)cmomeB264
MELO3C019829Cucurbita moschata (Rifu)cmomeB366
MELO3C019829Cucurbita moschata (Rifu)cmomeB585
MELO3C019829Cucurbita moschata (Rifu)cmomeB667
MELO3C019829Cucurbita moschata (Rifu)cmomeB674
MELO3C019829Wild cucumber (PI 183967)cpimeB390
MELO3C019829Wild cucumber (PI 183967)cpimeB481
MELO3C019829Cucumber (Chinese Long) v2cumeB394
MELO3C019829Cucumber (Chinese Long) v2cumeB475
MELO3C019829Watermelon (Charleston Gray)mewcgB286
MELO3C019829Watermelon (Charleston Gray)mewcgB292
MELO3C019829Watermelon (97103) v1mewmB321
MELO3C019829Watermelon (97103) v1mewmB326
MELO3C019829Cucurbita pepo (Zucchini)cpemeB166
MELO3C019829Cucurbita pepo (Zucchini)cpemeB396
MELO3C019829Cucurbita pepo (Zucchini)cpemeB404
MELO3C019829Bottle gourd (USVL1VR-Ls)lsimeB304
MELO3C019829Cucumber (Gy14) v2cgybmeB341
MELO3C019829Cucumber (Gy14) v2cgybmeB416