MELO3C019446 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C019446
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	ATP-dependent DNA helicase Q-like 4A
Location	chr6 : 9802909 .. 9804048 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTACAGATAGAACTATGCCCAGAAGCTTCAAGCCATTTGCAGGAGTTGAAAGATAGGCTAATCTCTATATCAAATGACCTGCTTGATAATGTTAATAACCTGAGCCCAGTGCAGATCGATAAGCTTCGGCAAGAAAGGTTTGCTATCCTGTATCCAATCCATTTTCTAAATAGGAGTATGTAAAATGTCTAACTTGCATGCACATATGTATATAAACAAGGACCGAAAGAACGTAACAGAATGAATTTTGGTTGGATCTATTTATGTACAAGTAGAAGAATTTTTTCTTTTGCCTTTTATATTGTAGTTTGTTTGTTTGTTGTTTATCTATATGCATAATACATAAGAAATGGGAACTTGAATTATCGTATCCATTCATTTGCAGGGTACATCTAAATAAACAAATTCAGCTACTAGAAAGACATATTTCTCTAGATGCAGTTAATGAGGAAAGGCGCAGGTCTCATCTTTTCGCGACAACAGTTACTCCGAAGACTTTTCATTTTGAAACACCTCAAGGAGCTGAATTCAGGACCGATGCAAAACTAAATACTTCTTACATTCACCAAGACCTTGAGCCTAGAAGGATTGAGCCATGGAATTCAATGGGTTCATCCTATGTAGATGAAAGATTTGGAATGTCATCTGGTCCGGTGGAGAGGGAACCATACATCCCCAAGGTGATTGATGTCAACTACATTGAAGGTTCTAATGACAAAAAGTGGAGCAGCCGGAATTTTTCTTGGACAAAAGAGTTGGAGGTGATACATTAAGGCTATTAAGCTTCTGTGTTTTTCTATGCTCATTGCCTTTTTTATCTTATATTTGATTTTTTATGCTTTAAGGCTAATAACAAAAAAGTGTTCGGTAATCACTCATTTCGTCCAAATCAAAGAGAGGTCATTAATGCTACAATGAGTGGGTATGACGTCTTTGTTTTAATGCCAACTGGAGGGGGAAAGAGCCTAACCTACCAGGTAAATGAACATATCTCAAAACCTCAAGCATTTACTTTAGGTTTCCCGTTCAGACACTCAAACTGGTCTACCATTTATATCTCTATTAACCTTCAATTTTGATGTTGGAGCTCTTTGTGCCTGCTATCATACAAGTTTTTCCAGTGCTATGAATATTTCC

mRNA sequence

ATGTTACAGATAGAACTATGCCCAGAAGCTTCAAGCCATTTGCAGGAGTTGAAAGATAGGCTAATCTCTATATCAAATGACCTGCTTGATAATGTTAATAACCTGAGCCCAGTGCAGATCGATAAGCTTCGGCAAGAAAGGGTACATCTAAATAAACAAATTCAGCTACTAGAAAGACATATTTCTCTAGATGCAGTTAATGAGGAAAGGCGCAGGTCTCATCTTTTCGCGACAACAGTTACTCCGAAGACTTTTCATTTTGAAACACCTCAAGGAGCTGAATTCAGGACCGATGCAAAACTAAATACTTCTTACATTCACCAAGACCTTGAGCCTAGAAGGATTGAGCCATGGAATTCAATGGGTTCATCCTATGTAGATGAAAGATTTGGAATGTCATCTGGTCCGGTGGAGAGGGAACCATACATCCCCAAGGTGATTGATGTCAACTACATTGAAGGTTCTAATGACAAAAAGTGGAGCAGCCGGAATTTTTCTTGGACAAAAGAGTTGGAGGCTAATAACAAAAAAGTGTTCGGTAATCACTCATTTCGTCCAAATCAAAGAGAGGTCATTAATGCTACAATGAGTGGGTATGACGTCTTTGTTTTAATGCCAACTGGAGGGGGAAAGAGCCTAACCTACCAGGTAAATGAACATATCTCAAAACCTCAAGCATTTACTTTAGGTTTCCCGTTCAGACACTCAAACTGGTCTACCATTTATATCTCTATTAACCTTCAATTTTGATGTTGGAGCTCTTTGTGCCTGCTATCATACAAGTTTTTCCAGTGCTATGAATATTTCC

Coding sequence (CDS)

ATGTTACAGATAGAACTATGCCCAGAAGCTTCAAGCCATTTGCAGGAGTTGAAAGATAGGCTAATCTCTATATCAAATGACCTGCTTGATAATGTTAATAACCTGAGCCCAGTGCAGATCGATAAGCTTCGGCAAGAAAGGGTACATCTAAATAAACAAATTCAGCTACTAGAAAGACATATTTCTCTAGATGCAGTTAATGAGGAAAGGCGCAGGTCTCATCTTTTCGCGACAACAGTTACTCCGAAGACTTTTCATTTTGAAACACCTCAAGGAGCTGAATTCAGGACCGATGCAAAACTAAATACTTCTTACATTCACCAAGACCTTGAGCCTAGAAGGATTGAGCCATGGAATTCAATGGGTTCATCCTATGTAGATGAAAGATTTGGAATGTCATCTGGTCCGGTGGAGAGGGAACCATACATCCCCAAGGTGATTGATGTCAACTACATTGAAGGTTCTAATGACAAAAAGTGGAGCAGCCGGAATTTTTCTTGGACAAAAGAGTTGGAGGCTAATAACAAAAAAGTGTTCGGTAATCACTCATTTCGTCCAAATCAAAGAGAGGTCATTAATGCTACAATGAGTGGGTATGACGTCTTTGTTTTAATGCCAACTGGAGGGGGAAAGAGCCTAACCTACCAGGTAAATGAACATATCTCAAAACCTCAAGCATTTACTTTAGGTTTCCCGTTCAGACACTCAAACTGGTCTACCATTTATATCTCTATTAACCTTCAATTTTGA

Protein sequence

MLQIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHISLDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRIEPWNSMGSSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQVNEHISKPQAFTLGFPFRHSNWSTIYISINLQF*

Homology

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BLAST of MELO3C019446 vs. Swiss-Prot
Match: RQL4A_ARATH (ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana GN=RECQL4A PE=2 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 2.0e-63
Identity = 121/218 (55.50%), Postives = 160/218 (73.39%), Query Frame = 1


Query: 2   LQIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHI 61
           +++ LCPEAS+H++++KD L++ISN+LLD+  +LSP ++ +LRQER+ L KQIQ LE HI
Sbjct: 275 IKLGLCPEASTHVEQMKDVLLAISNELLDDATDLSPDRVGQLRQERLRLKKQIQQLENHI 334

Query: 62  SLDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPR-RIEPWNS 121
                ++E ++S   ++T T + F +ETP+   ++ D        H   + R   + WN+
Sbjct: 335 R----DKESQKSQFLSSTAT-RIFQYETPKSTNYKMDQPQTDFRAHVSDQGRYACDSWNT 394

Query: 122 -MGSSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVF 181
              SS+  +R+G+SS PVERE Y+PK+IDV Y EGSNDKKWSSR F WT++LE NNKKVF
Sbjct: 395 PRDSSFSVDRYGLSSAPVEREQYVPKIIDVTYTEGSNDKKWSSREFPWTRKLEVNNKKVF 454

Query: 182 GNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQV 218
           GNHSFRPNQRE+INATMSG DVFVLMPTGGGKSLTYQ+
Sbjct: 455 GNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQL 487

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BLAST of MELO3C019446 vs. Swiss-Prot
Match: RQL4B_ARATH (ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis thaliana GN=RECQL4B PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 7.3e-50
Identity = 109/218 (50.00%), Postives = 142/218 (65.14%), Query Frame = 1


Query: 2   LQIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHI 61
           +++ LCPEAS+H++++KD L++ISN++LDN  +L P  +++L Q+R+ L KQIQ LE  I
Sbjct: 291 IKLGLCPEASTHVEQMKDTLLAISNEILDNTYDLGPDHVEQLHQKRLLLKKQIQQLEILI 350

Query: 62  SLDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRI-EPWNS 121
                N+ER++S    +  +  T  +ETPQ            S  H   + R + + WN 
Sbjct: 351 H----NKERKKSQCLVSIPSHNT-QYETPQTTNLEVVYGQTDSPTHVKEQGRCVTDNWNM 410

Query: 122 MGSSYVD-ERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVF 181
                V  ER+ +SSG  ERE  + +VIDV   E SNDKKW+S +F WTK LE  NK VF
Sbjct: 411 PRDYLVSKERYDISSGSEEREQSVSEVIDVTDTESSNDKKWTSSDFPWTKNLEVYNKLVF 470

Query: 182 GNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQV 218
           GNHSFRPNQRE+INATMSG DVFVLMPTGGGKSLTYQ+
Sbjct: 471 GNHSFRPNQREIINATMSGCDVFVLMPTGGGKSLTYQL 503

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BLAST of MELO3C019446 vs. Swiss-Prot
Match: BLM_MOUSE (Bloom syndrome protein homolog OS=Mus musculus GN=Blm PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 4.3e-10
Identity = 34/63 (53.97%), Postives = 39/63 (61.90%), Query Frame = 1


Query: 160 WSSRNFSWTKELEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQVNE 219
           + S NF  TKE+     K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQ+  
Sbjct: 652 FQSLNFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPA 711

Query: 220 HIS 223
            +S
Sbjct: 712 CVS 714

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BLAST of MELO3C019446 vs. Swiss-Prot
Match: BLM_HUMAN (Bloom syndrome protein OS=Homo sapiens GN=BLM PE=1 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.4e-10
Identity = 33/65 (50.77%), Postives = 41/65 (63.08%), Query Frame = 1


Query: 158 KKWSSRNFSWTKELEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQV 217
           +++ S +F  TKE+     K FG H+FR NQ E INA + G D F+LMPTGGGKSL YQ+
Sbjct: 642 ERFQSLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQL 701

Query: 218 NEHIS 223
              +S
Sbjct: 702 PACVS 706

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BLAST of MELO3C019446 vs. Swiss-Prot
Match: BLM_XENLA (Bloom syndrome protein homolog OS=Xenopus laevis GN=blm PE=2 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-09
Identity = 35/71 (49.30%), Postives = 41/71 (57.75%), Query Frame = 1


Query: 152 IEGSNDKKWSSRNFSWTKELEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGK 211
           IE    +++   NF  +KE+     K FG H FR NQ E INA + G D F+LMPTGGGK
Sbjct: 588 IENPAHERFRGFNFPHSKEMMKIFHKKFGLHRFRTNQLEAINACLCGEDCFILMPTGGGK 647

Query: 212 SLTYQVNEHIS 223
           SL YQ+   IS
Sbjct: 648 SLCYQLPGCIS 658

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BLAST of MELO3C019446 vs. TrEMBL
Match: A0A0A0L762_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G221760 PE=4 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 1.7e-117
Identity = 209/215 (97.21%), Postives = 212/215 (98.60%), Query Frame = 1


Query: 3   QIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS 62
           +IELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS
Sbjct: 257 KIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS 316

Query: 63  LDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRIEPWNSMG 122
           LDAVNEERRRSHLFATTVTPKTFHFETP G EFRTDAKLNTSY+HQD EPRRIEPWNSMG
Sbjct: 317 LDAVNEERRRSHLFATTVTPKTFHFETPPGVEFRTDAKLNTSYVHQDFEPRRIEPWNSMG 376

Query: 123 SSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNH 182
           SSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNH
Sbjct: 377 SSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNH 436

Query: 183 SFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQV 218
           SFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQ+
Sbjct: 437 SFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQL 471

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BLAST of MELO3C019446 vs. TrEMBL
Match: M5WMH6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000416mg PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 4.1e-76
Identity = 145/217 (66.82%), Postives = 174/217 (80.18%), Query Frame = 1


Query: 2   LQIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHI 61
           L+I LCPEA+SHLQE+KD LI+ISN+LLD+VN+LSP +I+KLRQ+R+ LNK+IQ LERH+
Sbjct: 220 LKIGLCPEAASHLQEMKDTLITISNELLDDVNDLSPTRIEKLRQDRLQLNKKIQQLERHL 279

Query: 62  SLDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRIEPWNSM 121
             ++++EERR+SH  A+T TP+ F +ETPQ A FRTD  +  S +     P   E  NS 
Sbjct: 280 CNNSLDEERRKSHFSASTATPRPFQYETPQAAAFRTDTMIFDSQVQSHNVPGDYERCNSS 339

Query: 122 GSSYVD-ERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFG 181
             S+   + FG SS PVEREPYIPK ++VNYIEGSND KWSS NF WTK+LEANNKKVFG
Sbjct: 340 SVSFSSVDGFGFSSCPVEREPYIPKFVEVNYIEGSNDNKWSSNNFPWTKKLEANNKKVFG 399

Query: 182 NHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQV 218
           NHSFR NQREVINATMSGYDVFVLMPTGGGKSLTYQ+
Sbjct: 400 NHSFRLNQREVINATMSGYDVFVLMPTGGGKSLTYQL 436

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BLAST of MELO3C019446 vs. TrEMBL
Match: A0A022QCX5_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a000354mg PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.8e-71
Identity = 131/215 (60.93%), Postives = 163/215 (75.81%), Query Frame = 1


Query: 3   QIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS 62
           ++ LCPEAS+HLQ +KD LI+ISNDL+DNV+ +SP Q++ LRQER  L KQ+Q LE++++
Sbjct: 298 KLGLCPEASNHLQAMKDSLIAISNDLIDNVDEMSPEQVETLRQERQQLKKQVQQLEKYLN 357

Query: 63  LDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRIEPWNSMG 122
             +VNEER  S   A+T  P+ F  +TP    FR D +   +    + EP   + W S  
Sbjct: 358 TTSVNEERNMSQFSASTTAPRAFQSDTPSTMPFRIDPRRLDTQFQANNEPYGFDRWGSSS 417

Query: 123 SSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNH 182
           +S+  + FG S+ P EREPY+PK ID+NYI+GSNDKKWSSR FSWTKELE NNKKVFGNH
Sbjct: 418 TSFSADGFGTSTAPFEREPYVPKYIDINYIDGSNDKKWSSREFSWTKELEVNNKKVFGNH 477

Query: 183 SFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQV 218
           SFRPNQREVINATMSG+DVFVLMPTGGGKSLTYQ+
Sbjct: 478 SFRPNQREVINATMSGHDVFVLMPTGGGKSLTYQL 512

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BLAST of MELO3C019446 vs. TrEMBL
Match: A0A061E184_THECC (DNA helicase isoform 1 OS=Theobroma cacao GN=TCM_006933 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.8e-71
Identity = 139/216 (64.35%), Postives = 172/216 (79.63%), Query Frame = 1


Query: 3   QIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS 62
           ++ LCPEA+SH+QE+KD+LI++SN+LLDN +NLSP QI+KLR++R+ LNKQIQ LER+I 
Sbjct: 321 KLGLCPEAASHVQEMKDKLIAVSNELLDNASNLSPEQIEKLREDRLQLNKQIQQLERYIC 380

Query: 63  LDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRIEPWNSMG 122
               + ER++SH  A+T T +TF + TPQ A F  D     + +H   EP   E WNS  
Sbjct: 381 ----DMERQKSHFSASTAT-RTFLYGTPQTASFSIDPIRFDAQVHLCNEPNGYENWNSSS 440

Query: 123 SSYVD-ERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGN 182
            S+     FG+SSGP+EREPY+PK+I+VNYIEGSND+KWSSR+F WTK+LEANNKKVFGN
Sbjct: 441 VSFSSVNNFGVSSGPMEREPYVPKIIEVNYIEGSNDQKWSSRDFPWTKKLEANNKKVFGN 500

Query: 183 HSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQV 218
           HSFRPNQREVINATMSG DVFVLMPTGGGKSLTYQ+
Sbjct: 501 HSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQL 531

[Close]

BLAST of MELO3C019446 vs. TrEMBL
Match: A0A061E0C7_THECC (DNA helicase (RECQl4A) isoform 2 OS=Theobroma cacao GN=TCM_006933 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 1.8e-71
Identity = 139/216 (64.35%), Postives = 172/216 (79.63%), Query Frame = 1


Query: 3   QIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS 62
           ++ LCPEA+SH+QE+KD+LI++SN+LLDN +NLSP QI+KLR++R+ LNKQIQ LER+I 
Sbjct: 267 KLGLCPEAASHVQEMKDKLIAVSNELLDNASNLSPEQIEKLREDRLQLNKQIQQLERYIC 326

Query: 63  LDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRIEPWNSMG 122
               + ER++SH  A+T T +TF + TPQ A F  D     + +H   EP   E WNS  
Sbjct: 327 ----DMERQKSHFSASTAT-RTFLYGTPQTASFSIDPIRFDAQVHLCNEPNGYENWNSSS 386

Query: 123 SSYVD-ERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGN 182
            S+     FG+SSGP+EREPY+PK+I+VNYIEGSND+KWSSR+F WTK+LEANNKKVFGN
Sbjct: 387 VSFSSVNNFGVSSGPMEREPYVPKIIEVNYIEGSNDQKWSSRDFPWTKKLEANNKKVFGN 446

Query: 183 HSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQV 218
           HSFRPNQREVINATMSG DVFVLMPTGGGKSLTYQ+
Sbjct: 447 HSFRPNQREVINATMSGCDVFVLMPTGGGKSLTYQL 477

[Close]

BLAST of MELO3C019446 vs. TAIR10
Match: AT1G10930.1 (AT1G10930.1 DNA helicase (RECQl4A))

HSP 1 Score: 243.8 bits (621), Expect = 1.1e-64
Identity = 121/218 (55.50%), Postives = 160/218 (73.39%), Query Frame = 1


Query: 2   LQIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHI 61
           +++ LCPEAS+H++++KD L++ISN+LLD+  +LSP ++ +LRQER+ L KQIQ LE HI
Sbjct: 275 IKLGLCPEASTHVEQMKDVLLAISNELLDDATDLSPDRVGQLRQERLRLKKQIQQLENHI 334

Query: 62  SLDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPR-RIEPWNS 121
                ++E ++S   ++T T + F +ETP+   ++ D        H   + R   + WN+
Sbjct: 335 R----DKESQKSQFLSSTAT-RIFQYETPKSTNYKMDQPQTDFRAHVSDQGRYACDSWNT 394

Query: 122 -MGSSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVF 181
              SS+  +R+G+SS PVERE Y+PK+IDV Y EGSNDKKWSSR F WT++LE NNKKVF
Sbjct: 395 PRDSSFSVDRYGLSSAPVEREQYVPKIIDVTYTEGSNDKKWSSREFPWTRKLEVNNKKVF 454

Query: 182 GNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQV 218
           GNHSFRPNQRE+INATMSG DVFVLMPTGGGKSLTYQ+
Sbjct: 455 GNHSFRPNQREIINATMSGSDVFVLMPTGGGKSLTYQL 487

[Close]

BLAST of MELO3C019446 vs. TAIR10
Match: AT1G60930.1 (AT1G60930.1 RECQ helicase L4B)

HSP 1 Score: 198.7 bits (504), Expect = 4.1e-51
Identity = 109/218 (50.00%), Postives = 142/218 (65.14%), Query Frame = 1


Query: 2   LQIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHI 61
           +++ LCPEAS+H++++KD L++ISN++LDN  +L P  +++L Q+R+ L KQIQ LE  I
Sbjct: 291 IKLGLCPEASTHVEQMKDTLLAISNEILDNTYDLGPDHVEQLHQKRLLLKKQIQQLEILI 350

Query: 62  SLDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRI-EPWNS 121
                N+ER++S    +  +  T  +ETPQ            S  H   + R + + WN 
Sbjct: 351 H----NKERKKSQCLVSIPSHNT-QYETPQTTNLEVVYGQTDSPTHVKEQGRCVTDNWNM 410

Query: 122 MGSSYVD-ERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVF 181
                V  ER+ +SSG  ERE  + +VIDV   E SNDKKW+S +F WTK LE  NK VF
Sbjct: 411 PRDYLVSKERYDISSGSEEREQSVSEVIDVTDTESSNDKKWTSSDFPWTKNLEVYNKLVF 470

Query: 182 GNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQV 218
           GNHSFRPNQRE+INATMSG DVFVLMPTGGGKSLTYQ+
Sbjct: 471 GNHSFRPNQREIINATMSGCDVFVLMPTGGGKSLTYQL 503

[Close]

BLAST of MELO3C019446 vs. TAIR10
Match: AT1G31360.1 (AT1G31360.1 RECQ helicase L2)

HSP 1 Score: 58.2 bits (139), Expect = 8.7e-09
Identity = 27/56 (48.21%), Postives = 32/56 (57.14%), Query Frame = 1


Query: 162 SRNFSWTKELEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQV 218
           S  F W    +     VFG   +R NQ+E+INA M+G DV V+M  GGGKSL YQ+
Sbjct: 68  SETFEWDSRADDVRFNVFGISKYRANQKEIINAIMTGRDVLVIMAAGGGKSLCYQL 123

[Close]

BLAST of MELO3C019446 vs. TAIR10
Match: AT3G05740.1 (AT3G05740.1 RECQ helicase l1)

HSP 1 Score: 55.8 bits (133), Expect = 4.3e-08
Identity = 27/48 (56.25%), Postives = 30/48 (62.50%), Query Frame = 1


Query: 170 ELEANNKKVFGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQV 218
           +LE  N  +FGN  FRP Q +   A+M   D FVLMPTGGGKSL YQ+
Sbjct: 193 DLEFANLVIFGNKVFRPLQHQACRASMERKDCFVLMPTGGGKSLCYQL 240

[Close]

BLAST of MELO3C019446 vs. TAIR10
Match: AT4G35740.1 (AT4G35740.1 DEAD/DEAH box RNA helicase family protein )

HSP 1 Score: 50.4 bits (119), Expect = 1.8e-06
Identity = 23/39 (58.97%), Postives = 25/39 (64.10%), Query Frame = 1


Query: 179 FGNHSFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQV 218
           FG+  FR  Q E I A +SG D F LMPTGGGKS+ YQ+
Sbjct: 32  FGHADFRGKQLEAIQAVVSGRDCFCLMPTGGGKSICYQI 70

[Close]

BLAST of MELO3C019446 vs. NCBI nr
Match: gi|659112086|ref|XP_008456059.1| (PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X2 [Cucumis melo])

HSP 1 Score: 436.0 bits (1120), Expect = 4.3e-119
Identity = 213/215 (99.07%), Postives = 215/215 (100.00%), Query Frame = 1


Query: 3   QIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS 62
           +IELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS
Sbjct: 277 KIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS 336

Query: 63  LDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRIEPWNSMG 122
           LDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRIEPWNSMG
Sbjct: 337 LDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRIEPWNSMG 396

Query: 123 SSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNH 182
           SSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNH
Sbjct: 397 SSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNH 456

Query: 183 SFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQV 218
           SFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQ+
Sbjct: 457 SFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQL 491

[Close]

BLAST of MELO3C019446 vs. NCBI nr
Match: gi|659112088|ref|XP_008456060.1| (PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X3 [Cucumis melo])

HSP 1 Score: 436.0 bits (1120), Expect = 4.3e-119
Identity = 213/215 (99.07%), Postives = 215/215 (100.00%), Query Frame = 1


Query: 3   QIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS 62
           +IELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS
Sbjct: 244 KIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS 303

Query: 63  LDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRIEPWNSMG 122
           LDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRIEPWNSMG
Sbjct: 304 LDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRIEPWNSMG 363

Query: 123 SSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNH 182
           SSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNH
Sbjct: 364 SSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNH 423

Query: 183 SFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQV 218
           SFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQ+
Sbjct: 424 SFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQL 458

[Close]

BLAST of MELO3C019446 vs. NCBI nr
Match: gi|659112090|ref|XP_008456061.1| (PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X4 [Cucumis melo])

HSP 1 Score: 436.0 bits (1120), Expect = 4.3e-119
Identity = 213/215 (99.07%), Postives = 215/215 (100.00%), Query Frame = 1


Query: 3   QIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS 62
           +IELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS
Sbjct: 210 KIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS 269

Query: 63  LDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRIEPWNSMG 122
           LDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRIEPWNSMG
Sbjct: 270 LDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRIEPWNSMG 329

Query: 123 SSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNH 182
           SSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNH
Sbjct: 330 SSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNH 389

Query: 183 SFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQV 218
           SFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQ+
Sbjct: 390 SFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQL 424

[Close]

BLAST of MELO3C019446 vs. NCBI nr
Match: gi|659112082|ref|XP_008456057.1| (PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X1 [Cucumis melo])

HSP 1 Score: 436.0 bits (1120), Expect = 4.3e-119
Identity = 213/215 (99.07%), Postives = 215/215 (100.00%), Query Frame = 1


Query: 3   QIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS 62
           +IELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS
Sbjct: 277 KIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS 336

Query: 63  LDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRIEPWNSMG 122
           LDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRIEPWNSMG
Sbjct: 337 LDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRIEPWNSMG 396

Query: 123 SSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNH 182
           SSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNH
Sbjct: 397 SSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNH 456

Query: 183 SFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQV 218
           SFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQ+
Sbjct: 457 SFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQL 491

[Close]

BLAST of MELO3C019446 vs. NCBI nr
Match: gi|778680266|ref|XP_011651280.1| (PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X1 [Cucumis sativus])

HSP 1 Score: 430.3 bits (1105), Expect = 2.4e-117
Identity = 209/215 (97.21%), Postives = 212/215 (98.60%), Query Frame = 1


Query: 3   QIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS 62
           +IELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS
Sbjct: 277 KIELCPEASSHLQELKDRLISISNDLLDNVNNLSPVQIDKLRQERVHLNKQIQLLERHIS 336

Query: 63  LDAVNEERRRSHLFATTVTPKTFHFETPQGAEFRTDAKLNTSYIHQDLEPRRIEPWNSMG 122
           LDAVNEERRRSHLFATTVTPKTFHFETP G EFRTDAKLNTSY+HQD EPRRIEPWNSMG
Sbjct: 337 LDAVNEERRRSHLFATTVTPKTFHFETPPGVEFRTDAKLNTSYVHQDFEPRRIEPWNSMG 396

Query: 123 SSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNH 182
           SSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNH
Sbjct: 397 SSYVDERFGMSSGPVEREPYIPKVIDVNYIEGSNDKKWSSRNFSWTKELEANNKKVFGNH 456

Query: 183 SFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQV 218
           SFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQ+
Sbjct: 457 SFRPNQREVINATMSGYDVFVLMPTGGGKSLTYQL 491

The following BLAST results are available for this feature:

BLAST of MELO3C019446 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RQL4A_ARATH	2.0e-63	55.50	ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana GN=RECQL4A PE=2 SV=...	[more]
RQL4B_ARATH	7.3e-50	50.00	ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis thaliana GN=RECQL4B PE=2 SV=...	[more]
BLM_MOUSE	4.3e-10	53.97	Bloom syndrome protein homolog OS=Mus musculus GN=Blm PE=1 SV=1	[more]
BLM_HUMAN	7.4e-10	50.77	Bloom syndrome protein OS=Homo sapiens GN=BLM PE=1 SV=1	[more]
BLM_XENLA	1.3e-09	49.30	Bloom syndrome protein homolog OS=Xenopus laevis GN=blm PE=2 SV=1	[more]

BLAST of MELO3C019446 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L762_CUCSA	1.7e-117	97.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G221760 PE=4 SV=1	[more]
M5WMH6_PRUPE	4.1e-76	66.82	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000416mg PE=4 SV=1	[more]
A0A022QCX5_ERYGU	1.8e-71	60.93	Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a000354mg PE=4 SV=1	[more]
A0A061E184_THECC	1.8e-71	64.35	DNA helicase isoform 1 OS=Theobroma cacao GN=TCM_006933 PE=4 SV=1	[more]
A0A061E0C7_THECC	1.8e-71	64.35	DNA helicase (RECQl4A) isoform 2 OS=Theobroma cacao GN=TCM_006933 PE=4 SV=1	[more]

BLAST of MELO3C019446 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G10930.1	1.1e-64	55.50	DNA helicase (RECQl4A)	[more]
AT1G60930.1	4.1e-51	50.00	RECQ helicase L4B	[more]
AT1G31360.1	8.7e-09	48.21	RECQ helicase L2	[more]
AT3G05740.1	4.3e-08	56.25	RECQ helicase l1	[more]
AT4G35740.1	1.8e-06	58.97	DEAD/DEAH box RNA helicase family protein	[more]

BLAST of MELO3C019446 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659112086\|ref\|XP_008456059.1\|	4.3e-119	99.07	PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X2 [Cucumis melo]	[more]
gi\|659112088\|ref\|XP_008456060.1\|	4.3e-119	99.07	PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X3 [Cucumis melo]	[more]
gi\|659112090\|ref\|XP_008456061.1\|	4.3e-119	99.07	PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X4 [Cucumis melo]	[more]
gi\|659112082\|ref\|XP_008456057.1\|	4.3e-119	99.07	PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X1 [Cucumis melo]	[more]
gi\|778680266\|ref\|XP_011651280.1\|	2.4e-117	97.21	PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X1 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032508	DNA duplex unwinding
biological_process	GO:0006310	DNA recombination
biological_process	GO:0006281	DNA repair
biological_process	GO:0006260	DNA replication
cellular_component	GO:0005657	replication fork
cellular_component	GO:0005622	intracellular
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0043140	ATP-dependent 3'-5' DNA helicase activity
molecular_function	GO:0003676	nucleic acid binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU44193	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019446T1	MELO3C019446T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU44193	MU44193	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 164..217 score: 5.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 161..221 score: 1.57
None	No IPR available	unknown	Coil	Coil	coord: 40..60 scor
None	No IPR available	PANTHER	PTHR13710	DNA HELICASE RECQ FAMILY MEMBER	coord: 144..217 score: 5.3E-51coord: 3..16 score: 5.3
None	No IPR available	PANTHER	PTHR13710:SF94	ATP-DEPENDENT DNA HELICASE RECQ FAMILY PROTEIN	coord: 144..217 score: 5.3E-51coord: 3..16 score: 5.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C019446	Csa3G221760	Cucumber (Chinese Long) v2	cumeB166
MELO3C019446	ClCG05G009530	Watermelon (Charleston Gray)	mewcgB427
MELO3C019446	CsGy3G018970	Cucumber (Gy14) v2	cgybmeB210

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C019446	Watermelon (97103) v1	mewmB461
MELO3C019446	Cucurbita pepo (Zucchini)	cpemeB192
MELO3C019446	Cucurbita pepo (Zucchini)	cpemeB412
MELO3C019446	Bottle gourd (USVL1VR-Ls)	lsimeB368
MELO3C019446	Silver-seed gourd	carmeB0041
MELO3C019446	Silver-seed gourd	carmeB0651
MELO3C019446	Cucumber (Chinese Long) v3	cucmeB247
MELO3C019446	Watermelon (97103) v2	mewmbB434
MELO3C019446	Wax gourd	mewgoB530
MELO3C019446	Cucumber (Gy14) v1	cgymeB002
MELO3C019446	Cucurbita maxima (Rimu)	cmameB298
MELO3C019446	Cucurbita maxima (Rimu)	cmameB691
MELO3C019446	Cucurbita moschata (Rifu)	cmomeB290
MELO3C019446	Cucurbita moschata (Rifu)	cmomeB683
MELO3C019446	Wild cucumber (PI 183967)	cpimeB241