MELO3C019445 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C019445
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionATP-dependent DNA helicase Q-like 4A
Locationchr6 : 9760378 .. 9761235 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCCCGCCCAACGCTCCTTCGTTCAGAAGCAATGGAGCAAAGATGAAATTAATATAATTTCCGCTACAGTGGCTTTTGGAATGGTGGGTATAACTGATCATTGCTTGTTGAAATATGAATTTGTATAGAAATAACAATCAACTATGCACTTATTTGGATATTTCAGGCATCAACAAGCCAAATGTTCGGTTTGTCATTCACCATTCTCTTCCAAAAAGTACCATCAGGTAATTAATTGTATACTGCTTCATTTAGTTGGTATTGTCCATGTAATAATAGTCTTCATTCAAAATATTTTTAATTCATCTTGAGAACATAAAAACTACAATTGGTCTTTGTTTTACCTCCCCCCCTCACCCCCATTTGTCTTTTACCAAAATAAACAGTGCTCATAGAGCTGCTGGATTATCGATAAAATTGTTTCTTATTATAATGTTCTTGGCTTTCGGTGTGTTTCTAATGTTTTAGGAGTGTGGCCGTGCAGGCAGAGATGGTATGCCTTCATCCCGTGTGTTATATTATAGTTACAGTGATTATGTAAGTTAAGTGATCATGGACTAACGTCTTACATTATCTAGCTGTAAAGGGTATAATATTACATTCACAAGGTTCTTGAAAAGTGGTTTGGATTCTAGTATCCATTGCTTATTGCTTACTGGCTCTTAAACTGATGAGTGGAGGCAAATTTAATATAATATCTAATGCCTATGTTTGTCAAAACTTCTTGAACATGTATGCAGATACGAGTCAAGCATATGATTAGCCAAGGAGCCACTGAGCAAAGTCCTCTCGTATCTGGATATAATTGTACCAATCTGGGCAGCTCTAGAAGGATACTAAAAGACCAACACTGA

mRNA sequence

ATGGATCCCGCCCAACGCTCCTTCGTTCAGAAGCAATGGAGCAAAGATGAAATTAATATAATTTCCGCTACAGTGGCTTTTGGAATGGTGGGCATCAACAAGCCAAATGTTCGGTTTGTCATTCACCATTCTCTTCCAAAAAGTACCATCAGGAGTGTGGCCGTGCAGGCAGAGATGATACGAGTCAAGCATATGATTAGCCAAGGAGCCACTGAGCAAAGTCCTCTCGTATCTGGATATAATTGTACCAATCTGGGCAGCTCTAGAAGGATACTAAAAGACCAACACTGA

Coding sequence (CDS)

ATGGATCCCGCCCAACGCTCCTTCGTTCAGAAGCAATGGAGCAAAGATGAAATTAATATAATTTCCGCTACAGTGGCTTTTGGAATGGTGGGCATCAACAAGCCAAATGTTCGGTTTGTCATTCACCATTCTCTTCCAAAAAGTACCATCAGGAGTGTGGCCGTGCAGGCAGAGATGATACGAGTCAAGCATATGATTAGCCAAGGAGCCACTGAGCAAAGTCCTCTCGTATCTGGATATAATTGTACCAATCTGGGCAGCTCTAGAAGGATACTAAAAGACCAACACTGA

Protein sequence

MDPAQRSFVQKQWSKDEINIISATVAFGMVGINKPNVRFVIHHSLPKSTIRSVAVQAEMIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKDQH*
Homology
[Close]
BLAST of MELO3C019445 vs. Swiss-Prot
Match: RQL4A_ARATH (ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana GN=RECQL4A PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 8.6e-23
Identity = 63/111 (56.76%), Postives = 72/111 (64.86%), Query Frame = 1 

Query: 1   MDPAQRSFVQKQWSKDEINIISATVAFGMVGINKPNVRFVIHHSLPKST----------- 60
           M+P QR+F+Q QWSKDEINII ATVAFGM GINKP+VRFVIHHSLPKS            
Sbjct: 707 MEPEQRAFIQTQWSKDEINIICATVAFGM-GINKPDVRFVIHHSLPKSIEGYHQECGRAG 766

Query: 61  ---IRSVAV----QAEMIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILK 94
               RS  V      + IRVKHMISQG  +QSP+ +GYN   + SS R+L+
Sbjct: 767 RDGQRSSCVLYYGYGDYIRVKHMISQGGVDQSPMATGYN--RVASSGRLLE 814

[Close]
BLAST of MELO3C019445 vs. Swiss-Prot
Match: RQL4B_ARATH (ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis thaliana GN=RECQL4B PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 5.6e-22
Identity = 64/111 (57.66%), Postives = 69/111 (62.16%), Query Frame = 1 

Query: 1   MDPAQRSFVQKQWSKDEINIISATVAFGMVGINKPNVRFVIHHSLPKST----------- 60
           MDP +R+FVQKQWSKDEINII ATVAFGM GINKP+VRFVIHHSLPKS            
Sbjct: 723 MDPGKRAFVQKQWSKDEINIICATVAFGM-GINKPDVRFVIHHSLPKSIEGYHQECGRAG 782

Query: 61  ---IRSVAV----QAEMIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILK 94
               RS  V      + IRVKHMISQG   Q  +  GYNC    SS R+L+
Sbjct: 783 RDGQRSSCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYNCK--ASSGRMLE 830

[Close]
BLAST of MELO3C019445 vs. Swiss-Prot
Match: RECQ1_CAEBR (Putative ATP-dependent DNA helicase Q1 OS=Caenorhabditis briggsae GN=CBG24191 PE=3 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.1e-09
Identity = 31/48 (64.58%), Postives = 35/48 (72.92%), Query Frame = 1 

Query: 1   MDPAQRSFVQKQWSKDEINIISATVAFGMVGINKPNVRFVIHHSLPKS 49
           M+P  RS   ++W   EI +I ATVAFGM GI+KP+VRFVIHHSLPKS
Sbjct: 343 MEPVDRSAAHQKWVSGEIQVIVATVAFGM-GIDKPDVRFVIHHSLPKS 389

[Close]
BLAST of MELO3C019445 vs. Swiss-Prot
Match: RECQ1_CAEEL (Putative ATP-dependent DNA helicase Q1 OS=Caenorhabditis elegans GN=K02F3.12 PE=3 SV=3)

HSP 1 Score: 62.8 bits (151), Expect = 2.4e-09
Identity = 31/48 (64.58%), Postives = 34/48 (70.83%), Query Frame = 1 

Query: 1   MDPAQRSFVQKQWSKDEINIISATVAFGMVGINKPNVRFVIHHSLPKS 49
           M+P  RS   + W   +I +I ATVAFGM GI+KPNVRFVIHHSLPKS
Sbjct: 366 MEPVDRSGAHQGWISGKIQVIVATVAFGM-GIDKPNVRFVIHHSLPKS 412

[Close]
BLAST of MELO3C019445 vs. Swiss-Prot
Match: RECQ1_HUMAN (ATP-dependent DNA helicase Q1 OS=Homo sapiens GN=RECQL PE=1 SV=3)

HSP 1 Score: 62.4 bits (150), Expect = 3.2e-09
Identity = 38/115 (33.04%), Postives = 60/115 (52.17%), Query Frame = 1 

Query: 1   MDPAQRSFVQKQWSKDEINIISATVAFGMVGINKPNVRFVIHHSLPKS------------ 60
           ++P  ++ V ++WS +EI ++ ATVAFGM GI+KP+VRFVIHHS+ KS            
Sbjct: 348 LEPEDKTTVHRKWSANEIQVVVATVAFGM-GIDKPDVRFVIHHSMSKSMENYYQESGRAG 407

Query: 61  --TIRSVAVQ----AEMIRVKHMISQGATEQSPLVSGYN-CTNLGSSRRILKDQH 97
              +++  +      ++ R+  M+      Q  L    + C N+   RR+L  QH
Sbjct: 408 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLMAQH 461

[Close]
BLAST of MELO3C019445 vs. TrEMBL
Match: A0A0A0L762_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G221760 PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.1e-29
Identity = 78/111 (70.27%), Postives = 84/111 (75.68%), Query Frame = 1 

Query: 1   MDPAQRSFVQKQWSKDEINIISATVAFGMVGINKPNVRFVIHHSLPKST----------- 60
           MDPAQRSF+QKQWSKDEINII ATVAFGM GINKP+VRFVIHHSLPKS            
Sbjct: 691 MDPAQRSFIQKQWSKDEINIICATVAFGM-GINKPDVRFVIHHSLPKSIEGYHQECGRAG 750

Query: 61  ---IRSVAV----QAEMIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILK 94
              +RS  V     ++ IRVKHMISQGATEQSPLVSGYN TNLGSS RIL+
Sbjct: 751 RDGLRSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILE 800

[Close]
BLAST of MELO3C019445 vs. TrEMBL
Match: M5WMH6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000416mg PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.7e-25
Identity = 71/111 (63.96%), Postives = 78/111 (70.27%), Query Frame = 1 

Query: 1   MDPAQRSFVQKQWSKDEINIISATVAFGMVGINKPNVRFVIHHSLPKST----------- 60
           MDPAQR+FVQKQWSKDEINII ATVAFGM GINKP+VRFVIHHSLPKS            
Sbjct: 656 MDPAQRAFVQKQWSKDEINIICATVAFGM-GINKPDVRFVIHHSLPKSIEGYHQECGRAG 715

Query: 61  ---IRSVAV----QAEMIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILK 94
               RS  V     ++ IRVKHMISQG  EQSPL SGYN TN  +S R+L+
Sbjct: 716 RDGQRSSCVLYYSYSDYIRVKHMISQGVIEQSPLASGYNRTNTANSGRVLE 765

[Close]
BLAST of MELO3C019445 vs. TrEMBL
Match: A0A0L9VHB1_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g273300 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.1e-24
Identity = 65/93 (69.89%), Postives = 73/93 (78.49%), Query Frame = 1 

Query: 1   MDPAQRSFVQKQWSKDEINIISATVAFGMVGINKPNVRFVIHHSLPKSTIRSVAVQAEMI 60
           MDPAQR+FVQKQWSKDEINII ATVAFGM GINKP+VRFVIHHSLPKS           I
Sbjct: 610 MDPAQRAFVQKQWSKDEINIICATVAFGM-GINKPDVRFVIHHSLPKS-----IEGYHQI 669

Query: 61  RVKHMISQGATEQSPLVSGYNCTNLGSSRRILK 94
           RVKHMISQG+ EQSP+ SGYN +N+ +   IL+
Sbjct: 670 RVKHMISQGSIEQSPMASGYNRSNMINPGSILE 696

[Close]
BLAST of MELO3C019445 vs. TrEMBL
Match: F6HK69_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g00400 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.2e-24
Identity = 69/111 (62.16%), Postives = 78/111 (70.27%), Query Frame = 1 

Query: 1   MDPAQRSFVQKQWSKDEINIISATVAFGMVGINKPNVRFVIHHSLPKST----------- 60
           MDPA+R+FVQKQWSKDEINII ATVAFGM GINKP+VRFVIHHSLPKS            
Sbjct: 612 MDPARRAFVQKQWSKDEINIICATVAFGM-GINKPDVRFVIHHSLPKSIEGYHQECGRAG 671

Query: 61  ---IRSVAV----QAEMIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILK 94
               RS  V     ++ IRVKHMI+QG  EQSPL SG N +N+ SS RIL+
Sbjct: 672 RDGQRSSCVLYYSYSDYIRVKHMITQGVVEQSPLASGQNRSNMASSGRILE 721

[Close]
BLAST of MELO3C019445 vs. TrEMBL
Match: A0A151T850_CAJCA (ATP-dependent DNA helicase hus2/rqh1 OS=Cajanus cajan GN=KK1_017751 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.2e-24
Identity = 68/111 (61.26%), Postives = 79/111 (71.17%), Query Frame = 1 

Query: 1   MDPAQRSFVQKQWSKDEINIISATVAFGMVGINKPNVRFVIHHSLPKST----------- 60
           MDPAQR+ VQKQWSKDEINII ATVAFGM GINKP+VRFVIHHSLPKS            
Sbjct: 600 MDPAQRASVQKQWSKDEINIICATVAFGM-GINKPDVRFVIHHSLPKSIEGYHQECGRAG 659

Query: 61  ---IRSVAV----QAEMIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILK 94
               RS  V     ++ IRVKHM+SQGA EQSP+ SGYN +N+ +S R+L+
Sbjct: 660 RDGQRSSCVLYYNYSDYIRVKHMLSQGAIEQSPMTSGYNRSNMTNSGRVLE 709

[Close]
BLAST of MELO3C019445 vs. TAIR10
Match: AT1G10930.1 (AT1G10930.1 DNA helicase (RECQl4A))

HSP 1 Score: 107.5 bits (267), Expect = 4.8e-24
Identity = 63/111 (56.76%), Postives = 72/111 (64.86%), Query Frame = 1 

Query: 1   MDPAQRSFVQKQWSKDEINIISATVAFGMVGINKPNVRFVIHHSLPKST----------- 60
           M+P QR+F+Q QWSKDEINII ATVAFGM GINKP+VRFVIHHSLPKS            
Sbjct: 707 MEPEQRAFIQTQWSKDEINIICATVAFGM-GINKPDVRFVIHHSLPKSIEGYHQECGRAG 766

Query: 61  ---IRSVAV----QAEMIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILK 94
               RS  V      + IRVKHMISQG  +QSP+ +GYN   + SS R+L+
Sbjct: 767 RDGQRSSCVLYYGYGDYIRVKHMISQGGVDQSPMATGYN--RVASSGRLLE 814

[Close]
BLAST of MELO3C019445 vs. TAIR10
Match: AT1G60930.1 (AT1G60930.1 RECQ helicase L4B)

HSP 1 Score: 104.8 bits (260), Expect = 3.1e-23
Identity = 64/111 (57.66%), Postives = 69/111 (62.16%), Query Frame = 1 

Query: 1   MDPAQRSFVQKQWSKDEINIISATVAFGMVGINKPNVRFVIHHSLPKST----------- 60
           MDP +R+FVQKQWSKDEINII ATVAFGM GINKP+VRFVIHHSLPKS            
Sbjct: 723 MDPGKRAFVQKQWSKDEINIICATVAFGM-GINKPDVRFVIHHSLPKSIEGYHQECGRAG 782

Query: 61  ---IRSVAV----QAEMIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILK 94
               RS  V      + IRVKHMISQG   Q  +  GYNC    SS R+L+
Sbjct: 783 RDGQRSSCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYNCK--ASSGRMLE 830

[Close]
BLAST of MELO3C019445 vs. TAIR10
Match: AT1G31360.1 (AT1G31360.1 RECQ helicase L2)

HSP 1 Score: 60.5 bits (145), Expect = 6.8e-10
Identity = 30/48 (62.50%), Postives = 34/48 (70.83%), Query Frame = 1 

Query: 1   MDPAQRSFVQKQWSKDEINIISATVAFGMVGINKPNVRFVIHHSLPKS 49
           MD   R  V  +WSK+++ +I  TVAFGM GINKP+VRFVIHHSL KS
Sbjct: 347 MDANMREKVHMRWSKNKLQVIVGTVAFGM-GINKPDVRFVIHHSLSKS 393

[Close]
BLAST of MELO3C019445 vs. TAIR10
Match: AT3G05740.1 (AT3G05740.1 RECQ helicase l1)

HSP 1 Score: 50.4 bits (119), Expect = 7.0e-07
Identity = 24/44 (54.55%), Postives = 33/44 (75.00%), Query Frame = 1 

Query: 5   QRSFVQKQWSKDEINIISATVAFGMVGINKPNVRFVIHHSLPKS 49
           QR  VQ++W   E+ I+ AT+AFGM GI+K +VRFVIH++L K+
Sbjct: 466 QRVDVQRKWQTGEVRIVCATIAFGM-GIDKADVRFVIHNTLSKA 508

[Close]
BLAST of MELO3C019445 vs. NCBI nr
Match: gi|659112096|ref|XP_008456063.1| (PREDICTED: ATP-dependent DNA helicase Q-like 4B isoform X1 [Cucumis melo])

HSP 1 Score: 154.1 bits (388), Expect = 1.3e-34
Identity = 84/110 (76.36%), Postives = 87/110 (79.09%), Query Frame = 1 

Query: 1   MDPAQRSFVQKQWSKDEINIISATVAFGMVGINKPNVRFVIHHSLPK------------- 60
           MDPAQRSFVQKQWSKDEINIISATVAFGM GINKPNVRFVIHHSLPK             
Sbjct: 1   MDPAQRSFVQKQWSKDEINIISATVAFGM-GINKPNVRFVIHHSLPKYHQECGRAGRDGM 60

Query: 61  -STIRSVAVQAEMIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKDQH 97
            S+       ++ IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKDQH
Sbjct: 61  PSSRVLYYSYSDYIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKDQH 109

[Close]
BLAST of MELO3C019445 vs. NCBI nr
Match: gi|659112098|ref|XP_008456064.1| (PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X2 [Cucumis melo])

HSP 1 Score: 149.4 bits (376), Expect = 3.1e-33
Identity = 81/97 (83.51%), Postives = 85/97 (87.63%), Query Frame = 1 

Query: 1  MDPAQRSFVQKQWSKDEINIISATVAFGMVGINKP-NVRFVIHHSLPKSTIRSVAVQAEM 60
          MDPAQRSFVQKQWSKDEINIISATVAFGM   ++   + F I   L +STIRSVAVQAEM
Sbjct: 1  MDPAQRSFVQKQWSKDEINIISATVAFGMASTSQMFGLSFTI---LFQSTIRSVAVQAEM 60

Query: 61 IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKDQH 97
          IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKDQH
Sbjct: 61 IRVKHMISQGATEQSPLVSGYNCTNLGSSRRILKDQH 94

[Close]
BLAST of MELO3C019445 vs. NCBI nr
Match: gi|659112086|ref|XP_008456059.1| (PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X2 [Cucumis melo])

HSP 1 Score: 138.7 bits (348), Expect = 5.6e-30
Identity = 75/93 (80.65%), Postives = 78/93 (83.87%), Query Frame = 1 

Query: 1   MDPAQRSFVQKQWSKDEINIISATVAFGMVGINKPNVRFVIHHSLPKSTIRSVAVQAEMI 60
           MDPAQRSF+QKQWSKDEINII ATVAFGM GINKP+VRFVIHHSLPKS           I
Sbjct: 711 MDPAQRSFIQKQWSKDEINIICATVAFGM-GINKPDVRFVIHHSLPKSI-----EGYHQI 770

Query: 61  RVKHMISQGATEQSPLVSGYNCTNLGSSRRILK 94
           RVKHMISQGATEQSPLVSGYN TNLGSS RIL+
Sbjct: 771 RVKHMISQGATEQSPLVSGYNRTNLGSSGRILE 797

[Close]
BLAST of MELO3C019445 vs. NCBI nr
Match: gi|778680266|ref|XP_011651280.1| (PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X1 [Cucumis sativus])

HSP 1 Score: 137.1 bits (344), Expect = 1.6e-29
Identity = 78/111 (70.27%), Postives = 84/111 (75.68%), Query Frame = 1 

Query: 1   MDPAQRSFVQKQWSKDEINIISATVAFGMVGINKPNVRFVIHHSLPKST----------- 60
           MDPAQRSF+QKQWSKDEINII ATVAFGM GINKP+VRFVIHHSLPKS            
Sbjct: 711 MDPAQRSFIQKQWSKDEINIICATVAFGM-GINKPDVRFVIHHSLPKSIEGYHQECGRAG 770

Query: 61  ---IRSVAV----QAEMIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILK 94
              +RS  V     ++ IRVKHMISQGATEQSPLVSGYN TNLGSS RIL+
Sbjct: 771 RDGLRSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILE 820

[Close]
BLAST of MELO3C019445 vs. NCBI nr
Match: gi|700202460|gb|KGN57593.1| (hypothetical protein Csa_3G221760 [Cucumis sativus])

HSP 1 Score: 137.1 bits (344), Expect = 1.6e-29
Identity = 78/111 (70.27%), Postives = 84/111 (75.68%), Query Frame = 1 

Query: 1   MDPAQRSFVQKQWSKDEINIISATVAFGMVGINKPNVRFVIHHSLPKST----------- 60
           MDPAQRSF+QKQWSKDEINII ATVAFGM GINKP+VRFVIHHSLPKS            
Sbjct: 691 MDPAQRSFIQKQWSKDEINIICATVAFGM-GINKPDVRFVIHHSLPKSIEGYHQECGRAG 750

Query: 61  ---IRSVAV----QAEMIRVKHMISQGATEQSPLVSGYNCTNLGSSRRILK 94
              +RS  V     ++ IRVKHMISQGATEQSPLVSGYN TNLGSS RIL+
Sbjct: 751 RDGLRSSCVLYYSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILE 800

The following BLAST results are available for this feature:
BLAST of MELO3C019445 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RQL4A_ARATH8.6e-2356.76ATP-dependent DNA helicase Q-like 4A OS=Arabidopsis thaliana GN=RECQL4A PE=2 SV=... [more]
RQL4B_ARATH5.6e-2257.66ATP-dependent DNA helicase Q-like 4B OS=Arabidopsis thaliana GN=RECQL4B PE=2 SV=... [more]
RECQ1_CAEBR1.1e-0964.58Putative ATP-dependent DNA helicase Q1 OS=Caenorhabditis briggsae GN=CBG24191 PE... [more]
RECQ1_CAEEL2.4e-0964.58Putative ATP-dependent DNA helicase Q1 OS=Caenorhabditis elegans GN=K02F3.12 PE=... [more]
RECQ1_HUMAN3.2e-0933.04ATP-dependent DNA helicase Q1 OS=Homo sapiens GN=RECQL PE=1 SV=3[more]
BLAST of MELO3C019445 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L762_CUCSA1.1e-2970.27Uncharacterized protein OS=Cucumis sativus GN=Csa_3G221760 PE=4 SV=1[more]
M5WMH6_PRUPE1.7e-2563.96Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000416mg PE=4 SV=1[more]
A0A0L9VHB1_PHAAN1.1e-2469.89Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan09g273300 PE=4 SV=1[more]
F6HK69_VITVI3.2e-2462.16Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0035g00400 PE=4 SV=... [more]
A0A151T850_CAJCA3.2e-2461.26ATP-dependent DNA helicase hus2/rqh1 OS=Cajanus cajan GN=KK1_017751 PE=4 SV=1[more]
BLAST of MELO3C019445 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10930.14.8e-2456.76 DNA helicase (RECQl4A)[more]
AT1G60930.13.1e-2357.66 RECQ helicase L4B[more]
AT1G31360.16.8e-1062.50 RECQ helicase L2[more]
AT3G05740.17.0e-0754.55 RECQ helicase l1[more]
BLAST of MELO3C019445 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659112096|ref|XP_008456063.1|1.3e-3476.36PREDICTED: ATP-dependent DNA helicase Q-like 4B isoform X1 [Cucumis melo][more]
gi|659112098|ref|XP_008456064.1|3.1e-3383.51PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X2 [Cucumis melo][more]
gi|659112086|ref|XP_008456059.1|5.6e-3080.65PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X2 [Cucumis melo][more]
gi|778680266|ref|XP_011651280.1|1.6e-2970.27PREDICTED: ATP-dependent DNA helicase Q-like 4A isoform X1 [Cucumis sativus][more]
gi|700202460|gb|KGN57593.1|1.6e-2970.27hypothetical protein Csa_3G221760 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0008026 ATP-dependent helicase activity
molecular_function GO:0000166 nucleotide binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU44193melon EST collection version 4.0transcribed_cluster
MU67114melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019445T1MELO3C019445T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU44193MU44193transcribed_cluster
MU67114MU67114transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 1..50
score: 8.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..47
score: 7.8
NoneNo IPR availablePANTHERPTHR13710DNA HELICASE RECQ FAMILY MEMBERcoord: 1..72
score: 4.3
NoneNo IPR availablePANTHERPTHR13710:SF94ATP-DEPENDENT DNA HELICASE RECQ FAMILY PROTEINcoord: 1..72
score: 4.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C019445Cucumber (Gy14) v1cgymeB002
MELO3C019445Cucurbita maxima (Rimu)cmameB298
MELO3C019445Cucurbita maxima (Rimu)cmameB691
MELO3C019445Cucurbita moschata (Rifu)cmomeB290
MELO3C019445Cucurbita moschata (Rifu)cmomeB683
MELO3C019445Wild cucumber (PI 183967)cpimeB241
MELO3C019445Cucumber (Chinese Long) v2cumeB166
MELO3C019445Watermelon (Charleston Gray)mewcgB427
MELO3C019445Watermelon (97103) v1mewmB461
MELO3C019445Cucurbita pepo (Zucchini)cpemeB192
MELO3C019445Cucurbita pepo (Zucchini)cpemeB412
MELO3C019445Bottle gourd (USVL1VR-Ls)lsimeB368
MELO3C019445Cucumber (Gy14) v2cgybmeB210
MELO3C019445Silver-seed gourdcarmeB0041
MELO3C019445Silver-seed gourdcarmeB0651
MELO3C019445Cucumber (Chinese Long) v3cucmeB247
MELO3C019445Watermelon (97103) v2mewmbB434
MELO3C019445Wax gourdmewgoB530