MELO3C019443 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGACACGAAGGAGATTTGTACGCTCGTGGGGTAATCAGACCCTTCGATCTGTGGATCCTAGGTTGTATGGGATTATAAAGAAAGAGAAACAATTCCAAATCAATGGCATTGAATTGTTTGCTTCTGAAAATTATGTGCGTCGAGCTGTAATGGAAGCACTTGGAAGCCACTTGACTAATAAGTACTCAAAAGGTATTCCTGGTGCGAGGTACTACGGTGGAAATCAATATATAGGTGAGATTGAAATCCTTTGTCATGAGCGCGCATTTTGGCAGCATTTGATCTTAATCCTCACACGTGGGGAGTTAACGTTCAACCTTATTCATGCACATCTGCAAATTTTTCCGTCTAAACTGGTTATATAGATTATGATAAGCTTGAGGAGAGGGCGCTTGCCTTTTGCCCTAAACTACTTATCTGTGGAGGGAGCGCGTATCCTCGTGAATTGGATTATGCAAGGTTTAGGCAGAATGCAGATAAGTTTGGAGCAGTTCTGATGTGTGATATGGCTCAAATTAGTGGCCTTGTTGCTGCTAAGGTGTGAATTTTTCGTCATCTTTAGCGATGTACTATCCCTTTAATGTCTGTGTAAAAAAAAAAAAAAATTTGGTTCGGGTCCACAAAGTTCTTGGTTTTCTTATCATATGTTCTAGTTACTATGACGTTCTCATTCTCTTGGGTTGCAATTTAGCTGGTTGTTAATATATTCATAATAATTGAATTGTTCTACCTGACACTTAGAAAAGGCTTCAAATGTGGTTGTGTGGAAATTTATTGTAGTTTTTAGCATTTAGGTTATGAATGGCTATGAAACTTAGTGATAGGAAAATGTAACTTATCGAGAGATTATGGTAGAGACTGATTTTAGGACTTAACCCTAGTTTACAAGTGCGTTGGGCCAAGATGTCAACCCATGGATATATTTTTTTTTGGACCAAAACGATTTGGTATTTATTCTTTCATGGTGGATATGTATTTATCAGAAAAACTGAAAGCTTGACCAACATCTATTATTTTTCTCAGCAGTAGGATGTTATTTTTTCTCTTCCTTTTCTACTTGGTTCTAATATACAGTTTTGTTCAACTGTGTGCTTATGTAGTTCTCAGTATTATTTGTTTACATGTGTAATTGTTTCTTCACTTACATTGTTTGGTCCAGTTCATCACTACTTCATACATGTGATCTTGTAATTTTGAATGAAGAATTGTCTCCATTCTGTTTATACTTTGATTGTGGTTTAAAATTTTGTTACAGGAATGTGCGAGTCTTTTTGAGTACTGTGATGTTGTGACTTCAACTACTCATAAGAGCCTTCGAAGTCCAAGGCGAGGTATAATTTTTTTATAA ATGGAGACACGAAGGAGATTTGTACGCTCGTGGGGTAATCAGACCCTTCGATCTGTGGATCCTAGGTTGTATGGGATTATAAAGAAAGAGAAACAATTCCAAATCAATGGCATTGAATTGTTTGCTTCTGAAAATTATGTGCGTCGAGCTGTAATGGAAGCACTTGGAAGCCACTTGACTAATAAGTACTCAAAAGGTATTCCTGGTGCGAGGTACTACGGTGGAAATCAATATATAGATTATGATAAGCTTGAGGAGAGGGCGCTTGCCTTTTGCCCTAAACTACTTATCTGTGGAGGGAGCGCGTATCCTCGTGAATTGGATTATGCAAGGTTTAGGCAGAATGCAGATAAGTTTGGAGCAGTTCTGATGTGTGATATGGCTCAAATTAGTGGCCTTGTTGCTGCTAAGGAATGTGCGAGTCTTTTTGAGTACTGTGATGTTGTGACTTCAACTACTCATAAGAGCCTTCGAAGTCCAAGGCGAGGTATAATTTTTTTATAA ATGGAGACACGAAGGAGATTTGTACGCTCGTGGGGTAATCAGACCCTTCGATCTGTGGATCCTAGGTTGTATGGGATTATAAAGAAAGAGAAACAATTCCAAATCAATGGCATTGAATTGTTTGCTTCTGAAAATTATGTGCGTCGAGCTGTAATGGAAGCACTTGGAAGCCACTTGACTAATAAGTACTCAAAAGGTATTCCTGGTGCGAGGTACTACGGTGGAAATCAATATATAGATTATGATAAGCTTGAGGAGAGGGCGCTTGCCTTTTGCCCTAAACTACTTATCTGTGGAGGGAGCGCGTATCCTCGTGAATTGGATTATGCAAGGTTTAGGCAGAATGCAGATAAGTTTGGAGCAGTTCTGATGTGTGATATGGCTCAAATTAGTGGCCTTGTTGCTGCTAAGGAATGTGCGAGTCTTTTTGAGTACTGTGATGTTGTGACTTCAACTACTCATAAGAGCCTTCGAAGTCCAAGGCGAGGTATAATTTTTTTATAA METRRRFVRSWGNQTLRSVDPRLYGIIKKEKQFQINGIELFASENYVRRAVMEALGSHLTNKYSKGIPGARYYGGNQYIDYDKLEERALAFCPKLLICGGSAYPRELDYARFRQNADKFGAVLMCDMAQISGLVAAKECASLFEYCDVVTSTTHKSLRSPRRGIIFL*
BLAST of MELO3C019443 vs. Swiss-Prot
Match: GLYC4_ARATH (Serine hydroxymethyltransferase 4 OS=Arabidopsis thaliana GN=SHM4 PE=1 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 6.4e-34 Identity = 70/89 (78.65%), Postives = 76/89 (85.39%), Query Frame = 1
HSP 2 Score: 101.3 bits (251), Expect = 1.1e-20 Identity = 48/73 (65.75%), Postives = 57/73 (78.08%), Query Frame = 1
BLAST of MELO3C019443 vs. Swiss-Prot
Match: GLYC7_ARATH (Serine hydroxymethyltransferase 7 OS=Arabidopsis thaliana GN=SHM7 PE=2 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 2.1e-32 Identity = 65/89 (73.03%), Postives = 75/89 (84.27%), Query Frame = 1
HSP 2 Score: 115.2 bits (287), Expect = 7.1e-25 Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = 1
BLAST of MELO3C019443 vs. Swiss-Prot
Match: GLYC6_ARATH (Serine hydroxymethyltransferase 6 OS=Arabidopsis thaliana GN=SHM6 PE=2 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 2.3e-31 Identity = 66/89 (74.16%), Postives = 74/89 (83.15%), Query Frame = 1
HSP 2 Score: 121.3 bits (303), Expect = 1.0e-26 Identity = 59/92 (64.13%), Postives = 72/92 (78.26%), Query Frame = 1
BLAST of MELO3C019443 vs. Swiss-Prot
Match: GLYC5_ARATH (Serine hydroxymethyltransferase 5 OS=Arabidopsis thaliana GN=SHM5 PE=3 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 3.0e-31 Identity = 72/124 (58.06%), Postives = 82/124 (66.13%), Query Frame = 1
HSP 2 Score: 95.9 bits (237), Expect = 4.5e-19 Identity = 46/73 (63.01%), Postives = 53/73 (72.60%), Query Frame = 1
BLAST of MELO3C019443 vs. Swiss-Prot
Match: GLYC1_DICDI (Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 5.3e-28 Identity = 70/122 (57.38%), Postives = 77/122 (63.11%), Query Frame = 1
HSP 2 Score: 87.8 bits (216), Expect = 1.2e-16 Identity = 38/69 (55.07%), Postives = 49/69 (71.01%), Query Frame = 1
BLAST of MELO3C019443 vs. TrEMBL
Match: M0TY90_MUSAM (Serine hydroxymethyltransferase OS=Musa acuminata subsp. malaccensis PE=3 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 1.3e-49 Identity = 108/186 (58.06%), Postives = 127/186 (68.28%), Query Frame = 1
BLAST of MELO3C019443 vs. TrEMBL
Match: A0A0A0LAD1_CUCSA (Serine hydroxymethyltransferase OS=Cucumis sativus GN=Csa_3G221750 PE=3 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 4.3e-37 Identity = 81/89 (91.01%), Postives = 81/89 (91.01%), Query Frame = 1
BLAST of MELO3C019443 vs. TrEMBL
Match: A0A0A0LAD1_CUCSA (Serine hydroxymethyltransferase OS=Cucumis sativus GN=Csa_3G221750 PE=3 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 7.2e-32 Identity = 73/92 (79.35%), Postives = 81/92 (88.04%), Query Frame = 1
HSP 2 Score: 156.4 bits (394), Expect = 3.1e-35 Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 1
BLAST of MELO3C019443 vs. TrEMBL
Match: S8BXF1_9LAMI (Serine hydroxymethyltransferase OS=Genlisea aurea GN=M569_15761 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 9.4e-24 Identity = 55/80 (68.75%), Postives = 66/80 (82.50%), Query Frame = 1
HSP 2 Score: 155.2 bits (391), Expect = 6.9e-35 Identity = 80/126 (63.49%), Postives = 91/126 (72.22%), Query Frame = 1
BLAST of MELO3C019443 vs. TrEMBL
Match: B9RJC7_RICCO (Serine hydroxymethyltransferase OS=Ricinus communis GN=RCOM_1033180 PE=3 SV=1) HSP 1 Score: 115.9 bits (289), Expect = 4.7e-23 Identity = 55/80 (68.75%), Postives = 66/80 (82.50%), Query Frame = 1
HSP 2 Score: 154.5 bits (389), Expect = 1.2e-34 Identity = 73/89 (82.02%), Postives = 80/89 (89.89%), Query Frame = 1
BLAST of MELO3C019443 vs. TAIR10
Match: AT4G13930.1 (AT4G13930.1 serine hydroxymethyltransferase 4) HSP 1 Score: 145.2 bits (365), Expect = 3.6e-35 Identity = 70/89 (78.65%), Postives = 76/89 (85.39%), Query Frame = 1
HSP 2 Score: 101.3 bits (251), Expect = 6.0e-22 Identity = 48/73 (65.75%), Postives = 57/73 (78.08%), Query Frame = 1
BLAST of MELO3C019443 vs. TAIR10
Match: AT1G36370.1 (AT1G36370.1 serine hydroxymethyltransferase 7) HSP 1 Score: 140.2 bits (352), Expect = 1.2e-33 Identity = 65/89 (73.03%), Postives = 75/89 (84.27%), Query Frame = 1
HSP 2 Score: 115.2 bits (287), Expect = 4.0e-26 Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = 1
BLAST of MELO3C019443 vs. TAIR10
Match: AT1G22020.1 (AT1G22020.1 serine hydroxymethyltransferase 6) HSP 1 Score: 136.7 bits (343), Expect = 1.3e-32 Identity = 66/89 (74.16%), Postives = 74/89 (83.15%), Query Frame = 1
HSP 2 Score: 121.3 bits (303), Expect = 5.6e-28 Identity = 59/92 (64.13%), Postives = 72/92 (78.26%), Query Frame = 1
BLAST of MELO3C019443 vs. TAIR10
Match: AT4G13890.1 (AT4G13890.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein) HSP 1 Score: 136.3 bits (342), Expect = 1.7e-32 Identity = 72/124 (58.06%), Postives = 82/124 (66.13%), Query Frame = 1
HSP 2 Score: 95.9 bits (237), Expect = 2.5e-20 Identity = 46/73 (63.01%), Postives = 53/73 (72.60%), Query Frame = 1
BLAST of MELO3C019443 vs. TAIR10
Match: AT4G32520.1 (AT4G32520.1 serine hydroxymethyltransferase 3) HSP 1 Score: 113.2 bits (282), Expect = 1.5e-25 Identity = 56/88 (63.64%), Postives = 62/88 (70.45%), Query Frame = 1
HSP 2 Score: 87.8 bits (216), Expect = 6.9e-18 Identity = 46/77 (59.74%), Postives = 52/77 (67.53%), Query Frame = 1
BLAST of MELO3C019443 vs. NCBI nr
Match: gi|659112103|ref|XP_008456065.1| (PREDICTED: serine hydroxymethyltransferase 7-like [Cucumis melo]) HSP 1 Score: 164.1 bits (414), Expect = 2.1e-37 Identity = 82/89 (92.13%), Postives = 82/89 (92.13%), Query Frame = 1
BLAST of MELO3C019443 vs. NCBI nr
Match: gi|659112103|ref|XP_008456065.1| (PREDICTED: serine hydroxymethyltransferase 7-like [Cucumis melo]) HSP 1 Score: 145.2 bits (365), Expect = 1.0e-31 Identity = 73/92 (79.35%), Postives = 81/92 (88.04%), Query Frame = 1
HSP 2 Score: 162.5 bits (410), Expect = 6.2e-37 Identity = 81/89 (91.01%), Postives = 81/89 (91.01%), Query Frame = 1
BLAST of MELO3C019443 vs. NCBI nr
Match: gi|449457095|ref|XP_004146284.1| (PREDICTED: serine hydroxymethyltransferase 7-like [Cucumis sativus]) HSP 1 Score: 145.2 bits (365), Expect = 1.0e-31 Identity = 73/92 (79.35%), Postives = 81/92 (88.04%), Query Frame = 1
HSP 2 Score: 156.4 bits (394), Expect = 4.5e-35 Identity = 74/89 (83.15%), Postives = 81/89 (91.01%), Query Frame = 1
BLAST of MELO3C019443 vs. NCBI nr
Match: gi|747089415|ref|XP_011092343.1| (PREDICTED: serine hydroxymethyltransferase 6-like [Sesamum indicum]) HSP 1 Score: 122.5 bits (306), Expect = 7.1e-25 Identity = 63/94 (67.02%), Postives = 76/94 (80.85%), Query Frame = 1
HSP 2 Score: 156.4 bits (394), Expect = 4.5e-35 Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 1
BLAST of MELO3C019443 vs. NCBI nr
Match: gi|527185784|gb|EPS59049.1| (hypothetical protein M569_15761 [Genlisea aurea]) HSP 1 Score: 118.2 bits (295), Expect = 1.3e-23 Identity = 55/80 (68.75%), Postives = 66/80 (82.50%), Query Frame = 1
HSP 2 Score: 155.2 bits (391), Expect = 9.9e-35 Identity = 80/126 (63.49%), Postives = 91/126 (72.22%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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