MELO3C019266.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C019266.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionDUF4228 domain-containing protein
Locationchr11 : 10383884 .. 10384724 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCTTTCTCATGTGCTCTTTATTCTTCTCTCTCTCTCTCTCTCTCTCTATAAATTCACCAAATTCAGTCTACACATTCAGTACTCAACATTTATTCGTTTCAATTTCTGCAATTCTCCATGGGGAATATCTGTTTTAGAACCAACAAAGTTATGGCTCAAGACGACTCTTATGACAATCTTCCTCCTGATCAGTTCATTGAAGCTGAGAAAGTCGAGGAACAACCGCTTCGTCCTGGATCGGCGATGGCGAAGCCGAAGAACGGAACCGGGGGTGCGGCCGGTAAGAAGGTAGTGAGGTTTAATTTACAAGAAGAAGAAGAAGATCAAGAGGACAGAAATTCCGGCGACGACTCTGGAGCGGGAGTGTTGAGGATTAAAGTGGTGATATCTCAGAAAGAGTTAAAAGAGATATTGAAGAATAGAGAGAACAATTCGTGTTCATTGGAGGAATTGATTGAGGAGTTGAAGGTGAAAGGGAGAGCGACGACGGTTTCAGATGAAATAGGAAGCTGGAAGCCGGCTTTGGAATGTATTCCTGAAGGTGAAGGTGATCTACATAAATGAATTGAAAGTTCTCTTGAGATCTGATGATCTCTTTAGTTTTCGTTAACAAATCTGTGAAATATTAGTGTAATTATTGTATAGGTGTGTTATTTAATTAATATCACCAAAACTGTTAGGGAATATCTGTGTGGATGTGATTCTTAGAAGGTAGAGAGTTGTGTGTTTCTTGAAGAACAATATGCTATATAGGGTGATAGTTTATACTAAGTAATTTTTGTAATAATCGTAGTTACATTTTTGAGATGCGATGGGAATAACAGCTTGATATACTTTATAG

mRNA sequence

GCTTTCTCATGTGCTCTTTATTCTTCTCTCTCTCTCTCTCTCTCTCTATAAATTCACCAAATTCAGTCTACACATTCAGTACTCAACATTTATTCGTTTCAATTTCTGCAATTCTCCATGGGGAATATCTGTTTTAGAACCAACAAAGTTATGGCTCAAGACGACTCTTATGACAATCTTCCTCCTGATCAGTTCATTGAAGCTGAGAAAGTCGAGGAACAACCGCTTCGTCCTGGATCGGCGATGGCGAAGCCGAAGAACGGAACCGGGGGTGCGGCCGGTAAGAAGGTAGTGAGGTTTAATTTACAAGAAGAAGAAGAAGATCAAGAGGACAGAAATTCCGGCGACGACTCTGGAGCGGGAGTGTTGAGGATTAAAGTGGTGATATCTCAGAAAGAGTTAAAAGAGATATTGAAGAATAGAGAGAACAATTCGTGTTCATTGGAGGAATTGATTGAGGAGTTGAAGGTGAAAGGGAGAGCGACGACGGTTTCAGATGAAATAGGAAGCTGGAAGCCGGCTTTGGAATGTATTCCTGAAGGTGAAGGTGATCTACATAAATGAATTGAAAGTTCTCTTGAGATCTGATGATCTCTTTAGTTTTCGTTAACAAATCTGTGAAATATTAGTGTAATTATTGTATAGGTGTGTTATTTAATTAATATCACCAAAACTGTTAGGGAATATCTGTGTGGATGTGATTCTTAGAAGGTAGAGAGTTGTGTGTTTCTTGAAGAACAATATGCTATATAGGGTGATAGTTTATACTAAGTAATTTTTGTAATAATCGTAGTTACATTTTTGAGATGCGATGGGAATAACAGCTTGATATACTTTATAG

Coding sequence (CDS)

ATGGGGAATATCTGTTTTAGAACCAACAAAGTTATGGCTCAAGACGACTCTTATGACAATCTTCCTCCTGATCAGTTCATTGAAGCTGAGAAAGTCGAGGAACAACCGCTTCGTCCTGGATCGGCGATGGCGAAGCCGAAGAACGGAACCGGGGGTGCGGCCGGTAAGAAGGTAGTGAGGTTTAATTTACAAGAAGAAGAAGAAGATCAAGAGGACAGAAATTCCGGCGACGACTCTGGAGCGGGAGTGTTGAGGATTAAAGTGGTGATATCTCAGAAAGAGTTAAAAGAGATATTGAAGAATAGAGAGAACAATTCGTGTTCATTGGAGGAATTGATTGAGGAGTTGAAGGTGAAAGGGAGAGCGACGACGGTTTCAGATGAAATAGGAAGCTGGAAGCCGGCTTTGGAATGTATTCCTGAAGGTGAAGGTGATCTACATAAATGA

Protein sequence

MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGKKVVRFNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKVKGRATTVSDEIGSWKPALECIPEGEGDLHK
BLAST of MELO3C019266.2 vs. NCBI nr
Match: KGN63254.1 (hypothetical protein Csa_2G418890 [Cucumis sativus])

HSP 1 Score: 225.7 bits (574), Expect = 1.0e-55
Identity = 119/147 (80.95%), Postives = 127/147 (86.39%), Query Frame = 0

Query: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGKKVVR 60
           MGNICF++NKVMAQDDSYD+ PP   IE +KV++QPL PGSAMAKPKNGTGGAAGKKVVR
Sbjct: 1   MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPL-PGSAMAKPKNGTGGAAGKKVVR 60

Query: 61  FNLQEEXXXXXXXXSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKVKG 120
           FNLQEE        SG DSG GVLRIKVVISQKELK+ILK+RENNSCSLEELIEELKVKG
Sbjct: 61  FNLQEEEKDEEGRNSG-DSGPGVLRIKVVISQKELKQILKSRENNSCSLEELIEELKVKG 120

Query: 121 RATTVS-DEIGSWKPALECIPEGEGDL 147
           RATTVS DE GSWKPALECIPEGE  L
Sbjct: 121 RATTVSADETGSWKPALECIPEGESTL 145

BLAST of MELO3C019266.2 vs. NCBI nr
Match: XP_022140639.1 (uncharacterized protein LOC111011249 [Momordica charantia])

HSP 1 Score: 96.3 bits (238), Expect = 9.4e-17
Identity = 75/154 (48.70%), Postives = 92/154 (59.74%), Query Frame = 0

Query: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAE-KVEEQPLRPGSAMAKPKNGTGGAAGKKVV 60
           MGN C R N+VMAQD++    P     E   KVE++P   GSA+A+PK        +  +
Sbjct: 43  MGN-CLRNNRVMAQDEACSPSPNSSLTETNYKVEDKP-AAGSALARPK------TEEARI 102

Query: 61  RFNLQEEXXXXXXXXSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKVK 120
                  XXXXXXXX          RIKVV+SQKELK+ILK+RE+NS +LEEL+ ELK+K
Sbjct: 103 XXXXXXXXXXXXXXXXXXXXXXXXXRIKVVVSQKELKQILKDRESNSSTLEELLAELKMK 162

Query: 121 G------RATTVSDEIGSWKPALECIPEGEGDLH 148
           G      RA    DE GSW+PALE IPE   DLH
Sbjct: 163 GRTISDARADNEEDENGSWRPALESIPE---DLH 185

BLAST of MELO3C019266.2 vs. NCBI nr
Match: XP_011047269.1 (PREDICTED: uncharacterized protein LOC105141672 [Populus euphratica])

HSP 1 Score: 77.4 bits (189), Expect = 4.5e-11
Identity = 57/154 (37.01%), Postives = 89/154 (57.79%), Query Frame = 0

Query: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGK-KVV 60
           MGN CF ++K+++++  +D     Q  EA+++ E+  RP   +AK + G     GK K+V
Sbjct: 1   MGN-CFASSKIVSENAMFD----QQSNEADQMIEKTTRPFVPLAKIERG-----GKAKMV 60

Query: 61  RFNLQEEXXXXXXXXSGDDS---GAGVLRIKVVISQKELKEILKNREN-NSCSLEELIEE 120
           RF L EE         GD++   G G +RI+VV++++ELK+IL  REN N  S+E+L+  
Sbjct: 61  RFRLNEEVNVDKDGDLGDETASKGGGAVRIRVVVTKEELKQILNFRENINYSSVEQLVSA 120

Query: 121 LKVKGRA------TTVSDEI--GSWKPALECIPE 142
           L+++ R+      T+    I  G WKP L  IPE
Sbjct: 121 LRLRERSRPDEGGTSTDGRIMCGGWKPLLGSIPE 144

BLAST of MELO3C019266.2 vs. NCBI nr
Match: XP_023923427.1 (uncharacterized protein LOC112034846 [Quercus suber] >POE96867.1 hypothetical protein CFP56_49616 [Quercus suber])

HSP 1 Score: 74.3 bits (181), Expect = 3.8e-10
Identity = 60/148 (40.54%), Postives = 83/148 (56.08%), Query Frame = 0

Query: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGG-AAGKKVV 60
           MGN C  +NK +AQ++           EAE VE+      S +   K   GG    KKVV
Sbjct: 1   MGN-CL-SNKSLAQEEEVPR-------EAEVVEQTKPSTASKIEPVKLVDGGQKKKKKVV 60

Query: 61  RFNLQEEXXXXXXXXSGDDSGAGVLRIKVVISQKELKEILKNREN-NSCSLEELIEELKV 120
           RF L+E+         G DS +GV+RI+VV++QKELK+IL  +E     S+E+L+  LK+
Sbjct: 61  RFKLEEDDINVGTSSEG-DSRSGVVRIRVVVTQKELKQILDCKEGLKFSSVEQLVNALKL 120

Query: 121 KGRATT---VSDE--IGSWKPALECIPE 142
           +GR  +    SDE    +W+PALE IPE
Sbjct: 121 RGRKISEVRTSDEGINSNWRPALESIPE 138

BLAST of MELO3C019266.2 vs. NCBI nr
Match: OIW05943.1 (hypothetical protein TanjilG_07219 [Lupinus angustifolius])

HSP 1 Score: 73.2 bits (178), Expect = 8.5e-10
Identity = 55/149 (36.91%), Postives = 84/149 (56.38%), Query Frame = 0

Query: 1   MGNICFRTNKVMAQDDSYDNLPPD-QFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGKKVV 60
           MGN C R NK+ AQD  ++N     +  +  KV++      S + +      G   KK V
Sbjct: 1   MGN-CLRNNKISAQD--HENYGTHVESCDVAKVQKVNASSSSKLKESVQKEQGMKKKKKV 60

Query: 61  RFNLQ-EEXXXXXXXXSGDDSGAGVLRIKVVISQKELKEIL--KNRENNSCSLEELIEEL 120
           RFN+Q ++        S  +S +GV+RIKVV++QKE K +L  +N E+N+ SLE+L+   
Sbjct: 61  RFNIQNDDGEENGDGGSEKNSRSGVVRIKVVMTQKEFKRVLSCQNDEHNT-SLEQLLSAF 120

Query: 121 KVKGRATTVSD--EIG--SWKPALECIPE 142
           K +G  + + +   +G  SW+PALE IPE
Sbjct: 121 KFRGGVSKICEYNNVGTSSWRPALESIPE 145

BLAST of MELO3C019266.2 vs. TAIR10
Match: AT3G21680.1 (unknown protein)

HSP 1 Score: 43.9 bits (102), Expect = 1.0e-04
Identity = 27/67 (40.30%), Postives = 43/67 (64.18%), Query Frame = 0

Query: 83  VLRIKVVISQKELKEILKNRENNSCSLEELIEELKVKGRATTVSD------EIG--SWKP 142
           V+RIKVV+++KEL++IL   +N   S+++L+  LK  GR  +++       E G  +W+P
Sbjct: 51  VVRIKVVVTKKELRQIL-GHKNGINSIQQLVHVLKDSGRNISMASYEEDEKEEGDENWRP 110

BLAST of MELO3C019266.2 vs. TrEMBL
Match: tr|A0A0A0LQE9|A0A0A0LQE9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 6.8e-56
Identity = 119/147 (80.95%), Postives = 127/147 (86.39%), Query Frame = 0

Query: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGKKVVR 60
           MGNICF++NKVMAQDDSYD+ PP   IE +KV++QPL PGSAMAKPKNGTGGAAGKKVVR
Sbjct: 1   MGNICFKSNKVMAQDDSYDDFPPHHLIEPKKVQQQPL-PGSAMAKPKNGTGGAAGKKVVR 60

Query: 61  FNLQEEXXXXXXXXSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIEELKVKG 120
           FNLQEE        SG DSG GVLRIKVVISQKELK+ILK+RENNSCSLEELIEELKVKG
Sbjct: 61  FNLQEEEKDEEGRNSG-DSGPGVLRIKVVISQKELKQILKSRENNSCSLEELIEELKVKG 120

Query: 121 RATTVS-DEIGSWKPALECIPEGEGDL 147
           RATTVS DE GSWKPALECIPEGE  L
Sbjct: 121 RATTVSADETGSWKPALECIPEGESTL 145

BLAST of MELO3C019266.2 vs. TrEMBL
Match: tr|A0A2P4KV19|A0A2P4KV19_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_49616 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.5e-10
Identity = 60/148 (40.54%), Postives = 83/148 (56.08%), Query Frame = 0

Query: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGG-AAGKKVV 60
           MGN C  +NK +AQ++           EAE VE+      S +   K   GG    KKVV
Sbjct: 1   MGN-CL-SNKSLAQEEEVPR-------EAEVVEQTKPSTASKIEPVKLVDGGQKKKKKVV 60

Query: 61  RFNLQEEXXXXXXXXSGDDSGAGVLRIKVVISQKELKEILKNREN-NSCSLEELIEELKV 120
           RF L+E+         G DS +GV+RI+VV++QKELK+IL  +E     S+E+L+  LK+
Sbjct: 61  RFKLEEDDINVGTSSEG-DSRSGVVRIRVVVTQKELKQILDCKEGLKFSSVEQLVNALKL 120

Query: 121 KGRATT---VSDE--IGSWKPALECIPE 142
           +GR  +    SDE    +W+PALE IPE
Sbjct: 121 RGRKISEVRTSDEGINSNWRPALESIPE 138

BLAST of MELO3C019266.2 vs. TrEMBL
Match: tr|A0A1J7GZ96|A0A1J7GZ96_LUPAN (Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_07219 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 5.6e-10
Identity = 55/149 (36.91%), Postives = 84/149 (56.38%), Query Frame = 0

Query: 1   MGNICFRTNKVMAQDDSYDNLPPD-QFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGKKVV 60
           MGN C R NK+ AQD  ++N     +  +  KV++      S + +      G   KK V
Sbjct: 1   MGN-CLRNNKISAQD--HENYGTHVESCDVAKVQKVNASSSSKLKESVQKEQGMKKKKKV 60

Query: 61  RFNLQ-EEXXXXXXXXSGDDSGAGVLRIKVVISQKELKEIL--KNRENNSCSLEELIEEL 120
           RFN+Q ++        S  +S +GV+RIKVV++QKE K +L  +N E+N+ SLE+L+   
Sbjct: 61  RFNIQNDDGEENGDGGSEKNSRSGVVRIKVVMTQKEFKRVLSCQNDEHNT-SLEQLLSAF 120

Query: 121 KVKGRATTVSD--EIG--SWKPALECIPE 142
           K +G  + + +   +G  SW+PALE IPE
Sbjct: 121 KFRGGVSKICEYNNVGTSSWRPALESIPE 145

BLAST of MELO3C019266.2 vs. TrEMBL
Match: tr|A0A2P5D5Z5|A0A2P5D5Z5_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_093360 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 9.6e-10
Identity = 53/156 (33.97%), Postives = 83/156 (53.21%), Query Frame = 0

Query: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNGTGGAAGKKVVR 60
           MGN C R N  +  +D  +   P +  E     EQ     ++ +KP++    A  K  VR
Sbjct: 1   MGN-CLRKNNKILGEDVDEQESPRKLAEQAVALEQNTSTSTSHSKPED-LKDAEKKNRVR 60

Query: 61  FNLQE-EXXXXXXXXSG-----DDSGAGVLRIKVVISQKELKEILKNRENNS---CSLEE 120
           F LQ+ E         G      DS +GV+RI++V++Q+ELK+IL  ++NN     S+E+
Sbjct: 61  FKLQDLEEKRTIGGGRGLNDPHGDSKSGVVRIRLVVTQEELKQILNYKKNNDSKFSSVEQ 120

Query: 121 LIEELKVKGRATTV----SDEIGSWKPALECIPEGE 144
           L+ E+K++G ++        + GSW PALE IPE +
Sbjct: 121 LLNEIKLRGSSSVFEVENKSDRGSWSPALETIPEDQ 154

BLAST of MELO3C019266.2 vs. TrEMBL
Match: tr|A0A2N9I735|A0A2N9I735_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47701 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.3e-09
Identity = 58/152 (38.16%), Postives = 80/152 (52.63%), Query Frame = 0

Query: 1   MGNICFRTNKVMAQDDSYDNLPPDQFIEAEKVE--EQPLRPGSAMAKPKNGTGGAAGKKV 60
           MGN C  +NK +A     + LP     EAE VE  E    P S +            KK+
Sbjct: 1   MGN-CL-SNKSLALVRKEEELPS----EAEMVEQTEPTFTPSSKLEASVKSVETKKKKKM 60

Query: 61  VRFNLQEEXXXXXXXXSGDDSGAGVLRIKVVISQKELKEILKNREN-NSCSLEELIEELK 120
           VRF L+E+            S +GV+RI+VV+S+KELKEIL  +E     S+E+L+  +K
Sbjct: 61  VRFKLEEDDNVGGRRSDHSASRSGVVRIRVVVSKKELKEILDCKEGFKYSSVEQLVNAMK 120

Query: 121 VKGR-----ATTVSDEIG---SWKPALECIPE 142
           ++GR      T+ +D+ G   SWKP LE IPE
Sbjct: 121 LRGRRISEVRTSTTDQGGINSSWKPDLESIPE 146

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN63254.11.0e-5580.95hypothetical protein Csa_2G418890 [Cucumis sativus][more]
XP_022140639.19.4e-1748.70uncharacterized protein LOC111011249 [Momordica charantia][more]
XP_011047269.14.5e-1137.01PREDICTED: uncharacterized protein LOC105141672 [Populus euphratica][more]
XP_023923427.13.8e-1040.54uncharacterized protein LOC112034846 [Quercus suber] >POE96867.1 hypothetical pr... [more]
OIW05943.18.5e-1036.91hypothetical protein TanjilG_07219 [Lupinus angustifolius][more]
Match NameE-valueIdentityDescription
AT3G21680.11.0e-0440.30unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0LQE9|A0A0A0LQE9_CUCSA6.8e-5680.95Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1[more]
tr|A0A2P4KV19|A0A2P4KV19_QUESU2.5e-1040.54Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_49616 PE=4 SV=1[more]
tr|A0A1J7GZ96|A0A1J7GZ96_LUPAN5.6e-1036.91Uncharacterized protein OS=Lupinus angustifolius OX=3871 GN=TanjilG_07219 PE=4 S... [more]
tr|A0A2P5D5Z5|A0A2P5D5Z5_PARAD9.6e-1033.97Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_093360 PE... [more]
tr|A0A2N9I735|A0A2N9I735_FAGSY1.3e-0938.16Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS47701 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0005525 GTP binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019266.2.1MELO3C019266.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 95..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..81
NoneNo IPR availablePANTHERPTHR33148FAMILY NOT NAMEDcoord: 1..142
NoneNo IPR availablePANTHERPTHR33148:SF5SUBFAMILY NOT NAMEDcoord: 1..142

The following gene(s) are paralogous to this gene:

None