MELO3C019249 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C019249
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Descriptionglutathione S-transferase tau 2
Locationchr11 : 9855072 .. 9855245 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAAAAGTAACCCAGTTTGTGGAGAAGGGAAAGGGCAAAGATATGACGTTTGATGAACACTACGAGGAGTTTGAGAAGGTGGTTGAGAATTTAAGTCTTTTAGAGCAAGAGGCGCTAAGGCCGAAGAAAAAGAGAAAGGTTATAATGAAGAAGAAGGCCTTGAAGGCATAA

mRNA sequence

ATGGAAAAAGTAACCCAGTTTGTGGAGAAGGGAAAGGGCAAAGATATGACGTTTGATGAACACTACGAGGAGTTTGAGAAGGTGGTTGAGAATTTAAGTCTTTTAGAGCAAGAGGCGCTAAGGCCGAAGAAAAAGAGAAAGGTTATAATGAAGAAGAAGGCCTTGAAGGCATAA

Coding sequence (CDS)

ATGGAAAAAGTAACCCAGTTTGTGGAGAAGGGAAAGGGCAAAGATATGACGTTTGATGAACACTACGAGGAGTTTGAGAAGGTGGTTGAGAATTTAAGTCTTTTAGAGCAAGAGGCGCTAAGGCCGAAGAAAAAGAGAAAGGTTATAATGAAGAAGAAGGCCTTGAAGGCATAA

Protein sequence

MEKVTQFVEKGKGKDMTFDEHYEEFEKVVENLSLLEQEALRPKKKRKVIMKKKALKA*
Homology
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BLAST of MELO3C019249 vs. NCBI nr
Match: gi|659083323|ref|XP_008442290.1| (PREDICTED: stress response protein NST1-like [Cucumis melo])

HSP 1 Score: 57.4 bits (137), Expect = 9.7e-06
Identity = 29/57 (50.88%), Postives = 39/57 (68.42%), Query Frame = 1 

Query: 1   MEKVTQFVEKGKGKDMTFDEHYEEFEKVVENLSLLEQEAL-RPKKKRKVIMKKKALK 57
           ++K+   VEKGK K+ TF+E Y+EFEK ++  S LE   + RP KKR V MKKK L+
Sbjct: 56  VDKLALSVEKGKEKEKTFEEFYKEFEKEIDEFSPLEDNVVERPAKKRNVTMKKKVLR 112

The following BLAST results are available for this feature:
BLAST of MELO3C019249 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659083323|ref|XP_008442290.1|9.7e-0650.88PREDICTED: stress response protein NST1-like [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019249T1MELO3C019249T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 18..38
scor

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C019249Wax gourdmewgoB107
MELO3C019249Wax gourdmewgoB126
MELO3C019249Melon (DHL92) v3.5.1memeB039
MELO3C019249Cucumber (Gy14) v1cgymeB014
MELO3C019249Cucumber (Gy14) v1cgymeB072
MELO3C019249Cucumber (Gy14) v1cgymeB246
MELO3C019249Cucurbita maxima (Rimu)cmameB087
MELO3C019249Cucurbita maxima (Rimu)cmameB451
MELO3C019249Cucurbita maxima (Rimu)cmameB502
MELO3C019249Cucurbita maxima (Rimu)cmameB533
MELO3C019249Cucurbita moschata (Rifu)cmomeB080
MELO3C019249Cucurbita moschata (Rifu)cmomeB443
MELO3C019249Cucurbita moschata (Rifu)cmomeB482
MELO3C019249Cucurbita moschata (Rifu)cmomeB523
MELO3C019249Cucurbita moschata (Rifu)cmomeB768
MELO3C019249Wild cucumber (PI 183967)cpimeB096
MELO3C019249Wild cucumber (PI 183967)cpimeB445
MELO3C019249Wild cucumber (PI 183967)cpimeB520
MELO3C019249Cucumber (Chinese Long) v2cumeB097
MELO3C019249Cucumber (Chinese Long) v2cumeB516
MELO3C019249Watermelon (Charleston Gray)mewcgB086
MELO3C019249Watermelon (Charleston Gray)mewcgB090
MELO3C019249Watermelon (Charleston Gray)mewcgB092
MELO3C019249Watermelon (97103) v1mewmB103
MELO3C019249Watermelon (97103) v1mewmB124
MELO3C019249Watermelon (97103) v1mewmB130
MELO3C019249Cucurbita pepo (Zucchini)cpemeB257
MELO3C019249Cucurbita pepo (Zucchini)cpemeB599
MELO3C019249Cucurbita pepo (Zucchini)cpemeB667
MELO3C019249Bottle gourd (USVL1VR-Ls)lsimeB053
MELO3C019249Bottle gourd (USVL1VR-Ls)lsimeB088
MELO3C019249Cucumber (Gy14) v2cgybmeB083
MELO3C019249Cucumber (Gy14) v2cgybmeB452
MELO3C019249Silver-seed gourdcarmeB0030
MELO3C019249Silver-seed gourdcarmeB0341
MELO3C019249Silver-seed gourdcarmeB0863
MELO3C019249Cucumber (Chinese Long) v3cucmeB103
MELO3C019249Cucumber (Chinese Long) v3cucmeB457
MELO3C019249Cucumber (Chinese Long) v3cucmeB532
MELO3C019249Watermelon (97103) v2mewmbB092
MELO3C019249Watermelon (97103) v2mewmbB106