MELO3C019189 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C019189
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Retrotransposon protein, putative, Ty3-gypsy subclass
Location	chr8 : 14169608 .. 14171115 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGAAGCCGCTGTGTCAGTAGGCAAGTTGGAAAGTTTAGTTGCACATTTCCAAGTGCGACCTTTTTTGATAGACCGTATTATTAAAGCCCAGCTAGATGATGCAAGACTGAGGAAGTTAGCAGAAGAGGTAAGACAAAACCAAAGATTGAATTATAGCTTGAGGGGTGATGGTGCCTTGATGAAATGTGATAGGTTGTGTGTACCCAGTGACCAAACGATAAAAGATCAAATTTTAGAGGAAGCACATAGTTCTGCATATGCAATGCATCCTGGTAGTACGAAAGTGTATAGAACTTTGAAGAAACACTATTGGTGGCCAGGTATAAAGCGTGAGATTGCAGATTATGTGGCTAAGTGTTTGATATGTCAGCAAGTTAAACCTGAACGTCAGAGACCAGCGGGACTCCTAAATCCTCTTCCAGTACCGGAATGGAAATGGGAGCATGTTACCATGGACTTTCATTTGGGACTACCCCGCACAACGAATGGGAATGATGGCATTTGGGTGATAGTTGACAGACTTACGAAGACAGCAAGATTTCTACCAAAGTCAAGGTCACTTTCACTTTGGATAAGCTGGCCAAATTGTATGTTGATAAAATTGTGAGTGCGTATGGAGCCCCAATATCTATTGTGTCTGATCGAGACTCCAAGTTTACCTCAAAGTTTTGGCCAAGTTTACAACAAGCCTTAGGTACCAAGTTACATTTTAGTACCGCATTTCATCCTCAGATAGATGGCCAGTAAGAACGAACCATTCAAACTTTGGAAGATATGCTTAGAGCTTGTGCTTTGCAGTTTAAGGGTAATTGGGATGCTCATCTATCCTTGATGGAATTTGCATATAATAATAGTTTCCATTCAAGTATTGGAATGGCACGATATGAGGCTTTGTATGGTAGATGTTGTAGAACTCTCGTGTGCTGGAATGAAGTTGGAGAAAGGAAGTTAGTGGGGCTAGAATTAGTACAAATCACTTCAGAGAATGTGAAGATTATTAGGGAAAGATTGAAAACAGCCCAGGATCGTAAAAAAAGTTATGCAGATAAGCGCCGACGAGATTTAGAATTTGAAGTTAGTGACAAAGTCTTTCTAAAGTTATCTCCTTGGAAAGGTGTGCTTCGATTTGGCAAAAAAGGAAAGTTGAGTCCAAGATTTATTGGGCCTTATGAGATACTTGAACGTATTGGGCCTGTAACATACCGTTTGGCGTTACCTATGGAACTTTCCAGGATTCCTGATGTGTTTCATGTGTCAATGCTGCGTAAGTACGTCCCAGATCCAGCTCATATTCTTGAAGCACAACCAGTTCATTTGAAAGAAAACTTGTCTTACGAAGAGGAGCCAATACAAATTCTTGACAAAAAAGAACAAGTGGTAAGGAACAAAATGATCCCATTAGTTAAGGTTCTTTGGAGGAACCATAATACTGAAGAAGCAACGTGGGAAACAGAGCAAGCAATGAAGGCGCAATACCCATATCTTTTCACATCATCACCTTGA

mRNA sequence

ATGGGTGAAGCCGCTGTGTCAGTAGGCAAGTTGGAAAGTTTAGTTGCACATTTCCAAGTGCGACCTTTTTTGATAGACCGTATTATTAAAGCCCAGCTAGATGATGCAAGACTGAGGAAGTTAGCAGAAGAGGTAAGACAAAACCAAAGATTGAATTATAGCTTGAGGGGTGATGGTGCCTTGATGAAATGTGATAGGTTGTGTGTACCCAGTGACCAAACGATAAAAGATCAAATTTTAGAGGAAGCACATAGTTCTGCATATGCAATGCATCCTGGTAGTACGAAAGTGTATAGAACTTTGAAGAAACACTATTGGTGGCCAGGTATAAAGCGTGAGATTGCAGATTATGTGGCTAAGTGTTTGATATGTCAGCAAGTTAAACCTGAACGTCAGAGACCAGCGGGACTCCTAAATCCTCTTCCAGTACCGGAATGGAAATGGGAGCATGTTACCATGGACTTTCATTTGGGACTACCCCGCACAACGAATGGGAATGATGGCATTTGGTTTAAGGGTAATTGGGATGCTCATCTATCCTTGATGGAATTTGCATATAATAATAGTTTCCATTCAAGTATTGGAATGGCACGATATGAGGCTTTGTATGGTAGATGTTGTAGAACTCTCGTGTGCTGGAATGAAGTTGGAGAAAGGAAGTTAGTGGGGCTAGAATTAGTACAAATCACTTCAGAGAATGTGAAGATTATTAGGGAAAGATTGAAAACAGCCCAGGATCGTAAAAAAAGTTATGCAGATAAGCGCCGACGAGATTTAGAATTTGAAGTTAGTGACAAAGTCTTTCTAAAGTTATCTCCTTGGAAAGGTGTGCTTCGATTTGGCAAAAAAGGAAAGTTGAGTCCAAGATTTATTGGGCCTTATGAGATACTTGAACGTATTGGGCCTGTAACATACCGTTTGGCGTTACCTATGGAACTTTCCAGGATTCCTGATGTGTTTCATGTGTCAATGCTGCGTAAGTACGTCCCAGATCCAGCTCATATTCTTGAAGCACAACCAGTTCATTTGAAAGAAAACTTGTCTTACGAAGAGGAGCCAATACAAATTCTTGACAAAAAAGAACAAGTGGTAAGGAACAAAATGATCCCATTAGTTAAGGTTCTTTGGAGGAACCATAATACTGAAGAAGCAACGTGGGAAACAGAGCAAGCAATGAAGGCGCAATACCCATATCTTTTCACATCATCACCTTGA

Coding sequence (CDS)

ATGGGTGAAGCCGCTGTGTCAGTAGGCAAGTTGGAAAGTTTAGTTGCACATTTCCAAGTGCGACCTTTTTTGATAGACCGTATTATTAAAGCCCAGCTAGATGATGCAAGACTGAGGAAGTTAGCAGAAGAGGTAAGACAAAACCAAAGATTGAATTATAGCTTGAGGGGTGATGGTGCCTTGATGAAATGTGATAGGTTGTGTGTACCCAGTGACCAAACGATAAAAGATCAAATTTTAGAGGAAGCACATAGTTCTGCATATGCAATGCATCCTGGTAGTACGAAAGTGTATAGAACTTTGAAGAAACACTATTGGTGGCCAGGTATAAAGCGTGAGATTGCAGATTATGTGGCTAAGTGTTTGATATGTCAGCAAGTTAAACCTGAACGTCAGAGACCAGCGGGACTCCTAAATCCTCTTCCAGTACCGGAATGGAAATGGGAGCATGTTACCATGGACTTTCATTTGGGACTACCCCGCACAACGAATGGGAATGATGGCATTTGGTTTAAGGGTAATTGGGATGCTCATCTATCCTTGATGGAATTTGCATATAATAATAGTTTCCATTCAAGTATTGGAATGGCACGATATGAGGCTTTGTATGGTAGATGTTGTAGAACTCTCGTGTGCTGGAATGAAGTTGGAGAAAGGAAGTTAGTGGGGCTAGAATTAGTACAAATCACTTCAGAGAATGTGAAGATTATTAGGGAAAGATTGAAAACAGCCCAGGATCGTAAAAAAAGTTATGCAGATAAGCGCCGACGAGATTTAGAATTTGAAGTTAGTGACAAAGTCTTTCTAAAGTTATCTCCTTGGAAAGGTGTGCTTCGATTTGGCAAAAAAGGAAAGTTGAGTCCAAGATTTATTGGGCCTTATGAGATACTTGAACGTATTGGGCCTGTAACATACCGTTTGGCGTTACCTATGGAACTTTCCAGGATTCCTGATGTGTTTCATGTGTCAATGCTGCGTAAGTACGTCCCAGATCCAGCTCATATTCTTGAAGCACAACCAGTTCATTTGAAAGAAAACTTGTCTTACGAAGAGGAGCCAATACAAATTCTTGACAAAAAAGAACAAGTGGTAAGGAACAAAATGATCCCATTAGTTAAGGTTCTTTGGAGGAACCATAATACTGAAGAAGCAACGTGGGAAACAGAGCAAGCAATGAAGGCGCAATACCCATATCTTTTCACATCATCACCTTGA

Protein sequence

MGEAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIWFKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFTSSP*

Homology

[Close]

BLAST of MELO3C019189 vs. Swiss-Prot
Match: TF28_SCHPO (Transposon Tf2-8 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-8 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.8e-13
Identity = 40/142 (28.17%), Postives = 70/142 (49.30%), Query Frame = 1


Query: 26   DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKC-DRLCVPSDQTIKDQILEEAH 85
            ++++    +D +L  L     +    N  L+ DG L+   D++ +P+D  +   I+++ H
Sbjct: 862  NQVVTEYTNDTKLLNLLNNEDKRVEENIQLK-DGLLINSKDQILLPNDTQLTRTIIKKYH 921

Query: 86   SSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVP 145
                 +HPG   +   + + + W GI+++I +YV  C  CQ  K    +P G L P+P  
Sbjct: 922  EEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 981

Query: 146  EWKWEHVTMDFHLGLPRTTNGN 167
            E  WE ++MDF   LP ++  N
Sbjct: 982  ERPWESLSMDFITALPESSGYN 1002

HSP 2 Score: 68.9 bits (167), Expect = 1.4e-10
Identity = 49/158 (31.01%), Postives = 77/158 (48.73%), Query Frame = 1


Query: 175  WDAHLSLMEFAYNNSFHSSIGMARYEAL--YGRCCRTLVCWNEVGERKLVGLELVQITSE 234
            W  H+SL++ +YNN+ HS+  M  +E +  Y      L   +   +      E +Q+   
Sbjct: 1107 WVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQV--- 1166

Query: 235  NVKIIRERLKTAQDRKKSYADKRRRDLE-FEVSDKVFLKLSPWKGVLRFGKKGKLSPRFI 294
              + ++E L T   + K Y D + +++E F+  D V +K +   G L   K  KL+P F 
Sbjct: 1167 -FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK-TGFLH--KSNKLAPSFA 1226

Query: 295  GPYEILERIGPVTYRLALPMELSRI-PDVFHVSMLRKY 329
            GP+ +L++ GP  Y L LP  +  +    FHVS L KY
Sbjct: 1227 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of MELO3C019189 vs. Swiss-Prot
Match: YG31B_YEAST (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-G PE=1 SV=3)

HSP 1 Score: 78.6 bits (192), Expect = 1.8e-13
Identity = 45/121 (37.19%), Postives = 60/121 (49.59%), Query Frame = 1


Query: 44   EVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKK 103
            E+ +  R NYSL  D  +   DRL VP  Q      L   H+  +  H G T     +  
Sbjct: 1067 ELSETFRKNYSLE-DEMIYYQDRLVVPIKQQNAVMRLYHDHT-LFGGHFGVTVTLAKISP 1126

Query: 104  HYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTT 163
             Y+WP ++  I  Y+  C+ CQ +K  R R  GLL PLP+ E +W  ++MDF  GLP T+
Sbjct: 1127 IYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTS 1185

Query: 164  N 165
            N
Sbjct: 1187 N 1185

[Close]

BLAST of MELO3C019189 vs. Swiss-Prot
Match: YI31B_YEAST (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY3B-I PE=3 SV=2)

HSP 1 Score: 78.6 bits (192), Expect = 1.8e-13
Identity = 45/121 (37.19%), Postives = 60/121 (49.59%), Query Frame = 1


Query: 44   EVRQNQRLNYSLRGDGALMKCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKK 103
            E+ +  R NYSL  D  +   DRL VP  Q      L   H+  +  H G T     +  
Sbjct: 1093 ELSETFRKNYSLE-DEMIYYQDRLVVPIKQQNAVMRLYHDHT-LFGGHFGVTVTLAKISP 1152

Query: 104  HYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVPEWKWEHVTMDFHLGLPRTT 163
             Y+WP ++  I  Y+  C+ CQ +K  R R  GLL PLP+ E +W  ++MDF  GLP T+
Sbjct: 1153 IYYWPKLQHSIIQYIRTCVQCQLIKSHRPRLHGLLQPLPIAEGRWLDISMDFVTGLPPTS 1211

Query: 164  N 165
            N
Sbjct: 1213 N 1211

[Close]

BLAST of MELO3C019189 vs. Swiss-Prot
Match: TF212_SCHPO (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-12 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.8e-13
Identity = 40/142 (28.17%), Postives = 70/142 (49.30%), Query Frame = 1


Query: 26   DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKC-DRLCVPSDQTIKDQILEEAH 85
            ++++    +D +L  L     +    N  L+ DG L+   D++ +P+D  +   I+++ H
Sbjct: 862  NQVVTEYTNDTKLLNLLNNEDKRVEENIQLK-DGLLINSKDQILLPNDTQLTRTIIKKYH 921

Query: 86   SSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVP 145
                 +HPG   +   + + + W GI+++I +YV  C  CQ  K    +P G L P+P  
Sbjct: 922  EEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 981

Query: 146  EWKWEHVTMDFHLGLPRTTNGN 167
            E  WE ++MDF   LP ++  N
Sbjct: 982  ERPWESLSMDFITALPESSGYN 1002

HSP 2 Score: 68.9 bits (167), Expect = 1.4e-10
Identity = 49/158 (31.01%), Postives = 77/158 (48.73%), Query Frame = 1


Query: 175  WDAHLSLMEFAYNNSFHSSIGMARYEAL--YGRCCRTLVCWNEVGERKLVGLELVQITSE 234
            W  H+SL++ +YNN+ HS+  M  +E +  Y      L   +   +      E +Q+   
Sbjct: 1107 WVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQV--- 1166

Query: 235  NVKIIRERLKTAQDRKKSYADKRRRDLE-FEVSDKVFLKLSPWKGVLRFGKKGKLSPRFI 294
              + ++E L T   + K Y D + +++E F+  D V +K +   G L   K  KL+P F 
Sbjct: 1167 -FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK-TGFLH--KSNKLAPSFA 1226

Query: 295  GPYEILERIGPVTYRLALPMELSRI-PDVFHVSMLRKY 329
            GP+ +L++ GP  Y L LP  +  +    FHVS L KY
Sbjct: 1227 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of MELO3C019189 vs. Swiss-Prot
Match: TF211_SCHPO (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=Tf2-11 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.8e-13
Identity = 40/142 (28.17%), Postives = 70/142 (49.30%), Query Frame = 1


Query: 26   DRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKC-DRLCVPSDQTIKDQILEEAH 85
            ++++    +D +L  L     +    N  L+ DG L+   D++ +P+D  +   I+++ H
Sbjct: 862  NQVVTEYTNDTKLLNLLNNEDKRVEENIQLK-DGLLINSKDQILLPNDTQLTRTIIKKYH 921

Query: 86   SSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLICQQVKPERQRPAGLLNPLPVP 145
                 +HPG   +   + + + W GI+++I +YV  C  CQ  K    +P G L P+P  
Sbjct: 922  EEGKLIHPGIELLTNIILRRFTWKGIRKQIQEYVQNCHTCQINKSRNHKPYGPLQPIPPS 981

Query: 146  EWKWEHVTMDFHLGLPRTTNGN 167
            E  WE ++MDF   LP ++  N
Sbjct: 982  ERPWESLSMDFITALPESSGYN 1002

HSP 2 Score: 68.9 bits (167), Expect = 1.4e-10
Identity = 49/158 (31.01%), Postives = 77/158 (48.73%), Query Frame = 1


Query: 175  WDAHLSLMEFAYNNSFHSSIGMARYEAL--YGRCCRTLVCWNEVGERKLVGLELVQITSE 234
            W  H+SL++ +YNN+ HS+  M  +E +  Y      L   +   +      E +Q+   
Sbjct: 1107 WVDHISLVQQSYNNAIHSATQMTPFEIVHRYSPALSPLELPSFSDKTDENSQETIQV--- 1166

Query: 235  NVKIIRERLKTAQDRKKSYADKRRRDLE-FEVSDKVFLKLSPWKGVLRFGKKGKLSPRFI 294
              + ++E L T   + K Y D + +++E F+  D V +K +   G L   K  KL+P F 
Sbjct: 1167 -FQTVKEHLNTNNIKMKKYFDMKIQEIEEFQPGDLVMVKRTK-TGFLH--KSNKLAPSFA 1226

Query: 295  GPYEILERIGPVTYRLALPMELSRI-PDVFHVSMLRKY 329
            GP+ +L++ GP  Y L LP  +  +    FHVS L KY
Sbjct: 1227 GPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKY 1257

[Close]

BLAST of MELO3C019189 vs. TrEMBL
Match: A0A061F9L8_THECC (Retrotransposon protein, putative OS=Theobroma cacao GN=TCM_033222 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 1.3e-132
Identity = 230/407 (56.51%), Postives = 303/407 (74.45%), Query Frame = 1


Query: 3   EAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALM 62
           E  +  G+  SL+A F VRP L+++I   Q  D  LRK  +++       + LR D  LM
Sbjct: 425 EVQLRNGEDGSLLASFIVRPSLLNQIKDIQRSDDELRKEIQKLIDEGVSEFRLREDNILM 484

Query: 63  KCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCL 122
             DR+CVP    ++  I+EEAHSSAYA+HP STK+YRT++++YWWPG+KR+IA++VAKCL
Sbjct: 485 FRDRVCVPKGNQLRQAIMEEAHSSAYALHPESTKMYRTIRENYWWPGMKRDIAEFVAKCL 544

Query: 123 ICQQVKPERQRPAGLLNPLPVPEWKWEHV------TMDFHLGLPRTTNGNDGIWFKGNWD 182
           +CQQVK E QRP G L  LPVPEWKWEH       T+     + R    +    F G+WD
Sbjct: 545 VCQQVKAEHQRPVGTLQSLPVPEWKWEHTDGQSERTIQIMEDMLRACVMD----FLGSWD 604

Query: 183 AHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQITSENVKI 242
            HL L+EFAYNNSF SSI MA YEALYG+ CRT +CW+EVGE+KL  +EL+++T++ +K+
Sbjct: 605 RHLPLVEFAYNNSFQSSISMAPYEALYGKKCRTPLCWDEVGEKKLCSVELIELTNDKIKV 664

Query: 243 IRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEI 302
           IRERLK AQDR+KSYADKRR+DLEF++ D+VFLK+SPWKGV+RF K+GKL+PR+IGP+ I
Sbjct: 665 IRERLKVAQDRQKSYADKRRKDLEFKIDDRVFLKVSPWKGVIRFAKRGKLNPRYIGPFRI 724

Query: 303 LERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQI 362
           +ERIGPV YRL LP EL RI +VFHVSML+KYVPDP+HILEA  + L ++L +E +P+ I
Sbjct: 725 IERIGPVAYRLELPPELDRIHNVFHVSMLKKYVPDPSHILEAPLIELHDDLKFEVQPVSI 784

Query: 363 LDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFTSS 404
           LD+K++V+RNK I +VKVLW++   EE TWE E  M+ QYP+LF  +
Sbjct: 785 LDRKDRVLRNKSISMVKVLWKSARMEEMTWEVEHQMRNQYPHLFVET 827

[Close]

BLAST of MELO3C019189 vs. TrEMBL
Match: Q5CAI7_ORYSJ (OSJNBa0032N05.11 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0032N05.11 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 6.6e-108
Identity = 189/425 (44.47%), Postives = 280/425 (65.88%), Query Frame = 1


Query: 15   VAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQT 74
            VA  + +P LID++ +AQ++D  ++++ + +R+ + + +     G +   +R+CVP ++ 
Sbjct: 979  VAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKD 1038

Query: 75   IKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLICQQVKPERQRP 134
            +KD +L+EAH + Y++HPGSTK+Y+ LK+ +WW  +KREIA+YVA C +CQ+VK E Q+P
Sbjct: 1039 LKDAVLKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKP 1098

Query: 135  AGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW------------------------ 194
            AGLL PL +PEWKWE + MDF  GLPRT++G+D IW                        
Sbjct: 1099 AGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPTDGQTERVNQ 1158

Query: 195  ------------FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGE 254
                        F G+WD +L   EF+YNNS+ +S+ MA YEALYGR CRT + W++ GE
Sbjct: 1159 ILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGE 1218

Query: 255  RKLVGLELVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVL 314
            R++ G ++++   E VKII+ERL+ AQ R KSYAD RRRDL FE  D V+L+++P +GV 
Sbjct: 1219 RQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVH 1278

Query: 315  RFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEA 374
            RF  KGKL+PRF+GPY+I+ R G V Y+L LP  L+   +VFHVS L+K +  P      
Sbjct: 1279 RFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGFHNVFHVSQLKKCLRIPTEEANI 1338

Query: 375  QPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPY 404
            + + ++E+L+Y E+PI+IL+  E+  RN++I   KV W NH+ EE+TWE E  +K+ +P+
Sbjct: 1339 EQIEVQEDLTYVEKPIRILETNERRTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPH 1398

[Close]

BLAST of MELO3C019189 vs. TrEMBL
Match: Q6UU73_ORYSJ (Putative polyprotein OS=Oryza sativa subsp. japonica GN=OSJNBa0023H09.24 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 1.1e-107
Identity = 186/412 (45.15%), Postives = 280/412 (67.96%), Query Frame = 1


Query: 15   VAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQT 74
            VA  + +P LID++ +AQ++D  ++++ + +R+ + + +     G +   +R+CVP ++ 
Sbjct: 1612 VAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKD 1671

Query: 75   IKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLICQQVKPERQRP 134
            +KD IL+EAH + Y++HPGSTK+Y+ L++ +WW  +KREIA+YVA C +CQ+VK E Q+P
Sbjct: 1672 LKDAILKEAHDTLYSIHPGSTKMYQDLEERFWWASMKREIAEYVAVCDVCQRVKAEHQKP 1731

Query: 135  AGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW-----------------------F 194
            AGLL PL +PEWKWE + MDF  GLPRT++G+D IW                       F
Sbjct: 1732 AGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVTDGQTERVNQILEDMLRACALDF 1791

Query: 195  KGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQITS 254
             G+WD +L   EF+YNNS+ +S+ MA YEALYGR CRT + W++ GER++ G ++++   
Sbjct: 1792 GGSWDRNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAE 1851

Query: 255  ENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFI 314
            E VKII+ERL+ AQ R KSYAD RRRDL F+  D V+L+++P +GV RF  KGKL P F+
Sbjct: 1852 EKVKIIQERLRVAQSRHKSYADNRRRDLSFDEGDYVYLRVTPLRGVHRFHTKGKLVPHFV 1911

Query: 315  GPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEE 374
            GPY+I+ R G V Y+L LP  L+ + +VFHVS L+K +  P      + + ++E+L+Y +
Sbjct: 1912 GPYKIVNRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANLEQIEVQEDLTYVQ 1971

Query: 375  EPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFTSS 404
            +PI+IL+ +E+  RN++I   KV W NH+ EE+TWE E  +K+ +P+LF SS
Sbjct: 1972 KPIRILEIEERRTRNRVIRFYKVQWSNHSEEESTWEREDELKSAHPHLFASS 2023

[Close]

BLAST of MELO3C019189 vs. TrEMBL
Match: Q7XRP6_ORYSJ (OSJNBb0080H08.12 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0080H08.12 PE=4 SV=2)

HSP 1 Score: 397.9 bits (1021), Expect = 1.5e-107
Identity = 190/425 (44.71%), Postives = 280/425 (65.88%), Query Frame = 1


Query: 15   VAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQT 74
            VA  + +P LID++ +AQ +D  ++++ + +R+ + + +     G +   +R+CVP ++ 
Sbjct: 1233 VAALEAKPTLIDQVREAQNNDPDIQEIKKNMRRGKAIGFLEDEHGTVWLGERICVPDNKD 1292

Query: 75   IKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLICQQVKPERQRP 134
            +KD IL+EAH + Y++HPGSTK+Y+ LK+ +WW  +KREIA+YVA C +CQ+VK E Q+P
Sbjct: 1293 LKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKP 1352

Query: 135  AGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW------------------------ 194
            AGLL PL +PEWKWE + MDF  GLPRT++G+D IW                        
Sbjct: 1353 AGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPTDGQTERVNQ 1412

Query: 195  ------------FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGE 254
                        F G+WD +L   EF+YNNS+ +S+ MA YEALYGR CRT + W++ GE
Sbjct: 1413 ILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGE 1472

Query: 255  RKLVGLELVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVL 314
            R++ G ++++   E VKII+ERL+ AQ R KSYAD RRRDL FE  D V+L+++P +GV 
Sbjct: 1473 RQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVH 1532

Query: 315  RFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEA 374
            RF  KGKL+PRF+GPY+I+ R G V Y+L LP  L+ + +VFHVS L+K +  P      
Sbjct: 1533 RFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANI 1592

Query: 375  QPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPY 404
            + + ++E+L+Y E+PI+IL+  E+  RN++I   KV W NH+ EE+TWE E  +K+ +P+
Sbjct: 1593 EQIEVQEDLTYVEKPIRILETSERRTRNRVIRFCKVPWSNHSEEESTWEREDELKSAHPH 1652

[Close]

BLAST of MELO3C019189 vs. TrEMBL
Match: Q2R8S5_ORYSJ (Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. japonica GN=LOC_Os11g11170 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 2.4e-105
Identity = 186/425 (43.76%), Postives = 278/425 (65.41%), Query Frame = 1


Query: 15   VAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQT 74
            VA  + +P LID++ +AQ++D  ++++ + +R+ + + +     G +   +R+CVP ++ 
Sbjct: 1096 VAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLKDEQGTVWLGERICVPDNKD 1155

Query: 75   IKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLICQQVKPERQRP 134
            +KD IL+EAH + Y++HPGSTK+Y+ L + +WW  +KREIA+YVA C +CQ+VK E Q+P
Sbjct: 1156 LKDAILKEAHDTLYSIHPGSTKMYQDLNEGFWWASMKREIAEYVAVCDVCQRVKAEHQKP 1215

Query: 135  AGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW------------------------ 194
            AGLL PL +PEWKWE + MDF  GLPRT++G+D IW                        
Sbjct: 1216 AGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPTDGQTERVNQ 1275

Query: 195  ------------FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGE 254
                        F G+WD +L   EF+YNNS+ +S+ MA YEALYGR CRT + W++ GE
Sbjct: 1276 ILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGE 1335

Query: 255  RKLVGLELVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVL 314
            R++ G ++++   E VKII+ERL+ AQ R KSYAD RRRDL F   D V+L+++P++GV 
Sbjct: 1336 RQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFGEGDYVYLRITPFRGVH 1395

Query: 315  RFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEA 374
            RF  K KL+PRF+GPY+I+ R G V Y+L LP  L+ + +VFHVS L+K +  P      
Sbjct: 1396 RFHTKEKLAPRFVGPYKIVNRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEETNL 1455

Query: 375  QPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPY 404
            + + ++E+L+Y E+PI+IL+  E+  RN++I    V W NH+ EE+TWE E  +K+ +P+
Sbjct: 1456 EQIEVQEDLTYIEKPIRILEIDERRTRNRVIRFCNVQWSNHSEEESTWEREDELKSAHPH 1515

[Close]

BLAST of MELO3C019189 vs. NCBI nr
Match: gi|590612958|ref|XP_007022530.1| (Retrotransposon protein, putative [Theobroma cacao])

HSP 1 Score: 481.1 bits (1237), Expect = 1.9e-132
Identity = 230/407 (56.51%), Postives = 303/407 (74.45%), Query Frame = 1


Query: 3   EAAVSVGKLESLVAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALM 62
           E  +  G+  SL+A F VRP L+++I   Q  D  LRK  +++       + LR D  LM
Sbjct: 425 EVQLRNGEDGSLLASFIVRPSLLNQIKDIQRSDDELRKEIQKLIDEGVSEFRLREDNILM 484

Query: 63  KCDRLCVPSDQTIKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCL 122
             DR+CVP    ++  I+EEAHSSAYA+HP STK+YRT++++YWWPG+KR+IA++VAKCL
Sbjct: 485 FRDRVCVPKGNQLRQAIMEEAHSSAYALHPESTKMYRTIRENYWWPGMKRDIAEFVAKCL 544

Query: 123 ICQQVKPERQRPAGLLNPLPVPEWKWEHV------TMDFHLGLPRTTNGNDGIWFKGNWD 182
           +CQQVK E QRP G L  LPVPEWKWEH       T+     + R    +    F G+WD
Sbjct: 545 VCQQVKAEHQRPVGTLQSLPVPEWKWEHTDGQSERTIQIMEDMLRACVMD----FLGSWD 604

Query: 183 AHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQITSENVKI 242
            HL L+EFAYNNSF SSI MA YEALYG+ CRT +CW+EVGE+KL  +EL+++T++ +K+
Sbjct: 605 RHLPLVEFAYNNSFQSSISMAPYEALYGKKCRTPLCWDEVGEKKLCSVELIELTNDKIKV 664

Query: 243 IRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFIGPYEI 302
           IRERLK AQDR+KSYADKRR+DLEF++ D+VFLK+SPWKGV+RF K+GKL+PR+IGP+ I
Sbjct: 665 IRERLKVAQDRQKSYADKRRKDLEFKIDDRVFLKVSPWKGVIRFAKRGKLNPRYIGPFRI 724

Query: 303 LERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEEEPIQI 362
           +ERIGPV YRL LP EL RI +VFHVSML+KYVPDP+HILEA  + L ++L +E +P+ I
Sbjct: 725 IERIGPVAYRLELPPELDRIHNVFHVSMLKKYVPDPSHILEAPLIELHDDLKFEVQPVSI 784

Query: 363 LDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFTSS 404
           LD+K++V+RNK I +VKVLW++   EE TWE E  M+ QYP+LF  +
Sbjct: 785 LDRKDRVLRNKSISMVKVLWKSARMEEMTWEVEHQMRNQYPHLFVET 827

[Close]

BLAST of MELO3C019189 vs. NCBI nr
Match: gi|32489966|emb|CAE05583.1| (OSJNBa0032N05.11 [Oryza sativa Japonica Group])

HSP 1 Score: 399.1 bits (1024), Expect = 9.5e-108
Identity = 189/425 (44.47%), Postives = 280/425 (65.88%), Query Frame = 1


Query: 15   VAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQT 74
            VA  + +P LID++ +AQ++D  ++++ + +R+ + + +     G +   +R+CVP ++ 
Sbjct: 979  VAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKD 1038

Query: 75   IKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLICQQVKPERQRP 134
            +KD +L+EAH + Y++HPGSTK+Y+ LK+ +WW  +KREIA+YVA C +CQ+VK E Q+P
Sbjct: 1039 LKDAVLKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKP 1098

Query: 135  AGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW------------------------ 194
            AGLL PL +PEWKWE + MDF  GLPRT++G+D IW                        
Sbjct: 1099 AGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPTDGQTERVNQ 1158

Query: 195  ------------FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGE 254
                        F G+WD +L   EF+YNNS+ +S+ MA YEALYGR CRT + W++ GE
Sbjct: 1159 ILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGE 1218

Query: 255  RKLVGLELVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVL 314
            R++ G ++++   E VKII+ERL+ AQ R KSYAD RRRDL FE  D V+L+++P +GV 
Sbjct: 1219 RQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVH 1278

Query: 315  RFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEA 374
            RF  KGKL+PRF+GPY+I+ R G V Y+L LP  L+   +VFHVS L+K +  P      
Sbjct: 1279 RFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGFHNVFHVSQLKKCLRIPTEEANI 1338

Query: 375  QPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPY 404
            + + ++E+L+Y E+PI+IL+  E+  RN++I   KV W NH+ EE+TWE E  +K+ +P+
Sbjct: 1339 EQIEVQEDLTYVEKPIRILETNERRTRNRVIRFCKVQWSNHSEEESTWEREDELKSAHPH 1398

[Close]

BLAST of MELO3C019189 vs. NCBI nr
Match: gi|34015295|gb|AAQ56486.1| (putative polyprotein [Oryza sativa Japonica Group])

HSP 1 Score: 398.3 bits (1022), Expect = 1.6e-107
Identity = 186/412 (45.15%), Postives = 280/412 (67.96%), Query Frame = 1


Query: 15   VAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQT 74
            VA  + +P LID++ +AQ++D  ++++ + +R+ + + +     G +   +R+CVP ++ 
Sbjct: 1612 VAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLEDEQGTVWLGERICVPDNKD 1671

Query: 75   IKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLICQQVKPERQRP 134
            +KD IL+EAH + Y++HPGSTK+Y+ L++ +WW  +KREIA+YVA C +CQ+VK E Q+P
Sbjct: 1672 LKDAILKEAHDTLYSIHPGSTKMYQDLEERFWWASMKREIAEYVAVCDVCQRVKAEHQKP 1731

Query: 135  AGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW-----------------------F 194
            AGLL PL +PEWKWE + MDF  GLPRT++G+D IW                       F
Sbjct: 1732 AGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVTDGQTERVNQILEDMLRACALDF 1791

Query: 195  KGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGERKLVGLELVQITS 254
             G+WD +L   EF+YNNS+ +S+ MA YEALYGR CRT + W++ GER++ G ++++   
Sbjct: 1792 GGSWDRNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDILREAE 1851

Query: 255  ENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVLRFGKKGKLSPRFI 314
            E VKII+ERL+ AQ R KSYAD RRRDL F+  D V+L+++P +GV RF  KGKL P F+
Sbjct: 1852 EKVKIIQERLRVAQSRHKSYADNRRRDLSFDEGDYVYLRVTPLRGVHRFHTKGKLVPHFV 1911

Query: 315  GPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEAQPVHLKENLSYEE 374
            GPY+I+ R G V Y+L LP  L+ + +VFHVS L+K +  P      + + ++E+L+Y +
Sbjct: 1912 GPYKIVNRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANLEQIEVQEDLTYVQ 1971

Query: 375  EPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPYLFTSS 404
            +PI+IL+ +E+  RN++I   KV W NH+ EE+TWE E  +K+ +P+LF SS
Sbjct: 1972 KPIRILEIEERRTRNRVIRFYKVQWSNHSEEESTWEREDELKSAHPHLFASS 2023

[Close]

BLAST of MELO3C019189 vs. NCBI nr
Match: gi|38344420|emb|CAE02386.2| (OSJNBb0080H08.12 [Oryza sativa Japonica Group])

HSP 1 Score: 397.9 bits (1021), Expect = 2.1e-107
Identity = 190/425 (44.71%), Postives = 280/425 (65.88%), Query Frame = 1


Query: 15   VAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQT 74
            VA  + +P LID++ +AQ +D  ++++ + +R+ + + +     G +   +R+CVP ++ 
Sbjct: 1233 VAALEAKPTLIDQVREAQNNDPDIQEIKKNMRRGKAIGFLEDEHGTVWLGERICVPDNKD 1292

Query: 75   IKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLICQQVKPERQRP 134
            +KD IL+EAH + Y++HPGSTK+Y+ LK+ +WW  +KREIA+YVA C +CQ+VK E Q+P
Sbjct: 1293 LKDAILKEAHDTLYSIHPGSTKMYQDLKERFWWASMKREIAEYVAVCDVCQRVKAEHQKP 1352

Query: 135  AGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW------------------------ 194
            AGLL PL +PEWKWE + MDF  GLPRT++G+D IW                        
Sbjct: 1353 AGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPTDGQTERVNQ 1412

Query: 195  ------------FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGE 254
                        F G+WD +L   EF+YNNS+ +S+ MA YEALYGR CRT + W++ GE
Sbjct: 1413 ILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGE 1472

Query: 255  RKLVGLELVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVL 314
            R++ G ++++   E VKII+ERL+ AQ R KSYAD RRRDL FE  D V+L+++P +GV 
Sbjct: 1473 RQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVH 1532

Query: 315  RFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEA 374
            RF  KGKL+PRF+GPY+I+ R G V Y+L LP  L+ + +VFHVS L+K +  P      
Sbjct: 1533 RFHTKGKLAPRFVGPYKIVSRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEEANI 1592

Query: 375  QPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPY 404
            + + ++E+L+Y E+PI+IL+  E+  RN++I   KV W NH+ EE+TWE E  +K+ +P+
Sbjct: 1593 EQIEVQEDLTYVEKPIRILETSERRTRNRVIRFCKVPWSNHSEEESTWEREDELKSAHPH 1652

[Close]

BLAST of MELO3C019189 vs. NCBI nr
Match: gi|77549283|gb|ABA92080.1| (retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group])

HSP 1 Score: 390.6 bits (1002), Expect = 3.4e-105
Identity = 186/425 (43.76%), Postives = 278/425 (65.41%), Query Frame = 1


Query: 15   VAHFQVRPFLIDRIIKAQLDDARLRKLAEEVRQNQRLNYSLRGDGALMKCDRLCVPSDQT 74
            VA  + +P LID++ +AQ++D  ++++ + +R+ + + +     G +   +R+CVP ++ 
Sbjct: 1096 VAALEAKPTLIDQVREAQINDPDIQEIKKNMRRGKAIGFLKDEQGTVWLGERICVPDNKD 1155

Query: 75   IKDQILEEAHSSAYAMHPGSTKVYRTLKKHYWWPGIKREIADYVAKCLICQQVKPERQRP 134
            +KD IL+EAH + Y++HPGSTK+Y+ L + +WW  +KREIA+YVA C +CQ+VK E Q+P
Sbjct: 1156 LKDAILKEAHDTLYSIHPGSTKMYQDLNEGFWWASMKREIAEYVAVCDVCQRVKAEHQKP 1215

Query: 135  AGLLNPLPVPEWKWEHVTMDFHLGLPRTTNGNDGIW------------------------ 194
            AGLL PL +PEWKWE + MDF  GLPRT++G+D IW                        
Sbjct: 1216 AGLLQPLKIPEWKWEEIGMDFITGLPRTSSGHDSIWVIVDRLTKVAHFIPTDGQTERVNQ 1275

Query: 195  ------------FKGNWDAHLSLMEFAYNNSFHSSIGMARYEALYGRCCRTLVCWNEVGE 254
                        F G+WD +L   EF+YNNS+ +S+ MA YEALYGR CRT + W++ GE
Sbjct: 1276 ILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGRKCRTPLLWDQTGE 1335

Query: 255  RKLVGLELVQITSENVKIIRERLKTAQDRKKSYADKRRRDLEFEVSDKVFLKLSPWKGVL 314
            R++ G ++++   E VKII+ERL+ AQ R KSYAD RRRDL F   D V+L+++P++GV 
Sbjct: 1336 RQVFGTDILREAEEKVKIIQERLRVAQSRHKSYADNRRRDLSFGEGDYVYLRITPFRGVH 1395

Query: 315  RFGKKGKLSPRFIGPYEILERIGPVTYRLALPMELSRIPDVFHVSMLRKYVPDPAHILEA 374
            RF  K KL+PRF+GPY+I+ R G V Y+L LP  L+ + +VFHVS L+K +  P      
Sbjct: 1396 RFHTKEKLAPRFVGPYKIVNRRGEVAYQLELPQSLAGVHNVFHVSQLKKCLRVPTEETNL 1455

Query: 375  QPVHLKENLSYEEEPIQILDKKEQVVRNKMIPLVKVLWRNHNTEEATWETEQAMKAQYPY 404
            + + ++E+L+Y E+PI+IL+  E+  RN++I    V W NH+ EE+TWE E  +K+ +P+
Sbjct: 1456 EQIEVQEDLTYIEKPIRILEIDERRTRNRVIRFCNVQWSNHSEEESTWEREDELKSAHPH 1515

The following BLAST results are available for this feature:

BLAST of MELO3C019189 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TF28_SCHPO	1.8e-13	28.17	Transposon Tf2-8 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
YG31B_YEAST	1.8e-13	37.19	Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
YI31B_YEAST	1.8e-13	37.19	Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
TF212_SCHPO	1.8e-13	28.17	Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]
TF211_SCHPO	1.8e-13	28.17	Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24...	[more]

BLAST of MELO3C019189 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061F9L8_THECC	1.3e-132	56.51	Retrotransposon protein, putative OS=Theobroma cacao GN=TCM_033222 PE=4 SV=1	[more]
Q5CAI7_ORYSJ	6.6e-108	44.47	OSJNBa0032N05.11 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0032N05.11 PE=...	[more]
Q6UU73_ORYSJ	1.1e-107	45.15	Putative polyprotein OS=Oryza sativa subsp. japonica GN=OSJNBa0023H09.24 PE=4 SV...	[more]
Q7XRP6_ORYSJ	1.5e-107	44.71	OSJNBb0080H08.12 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0080H08.12 PE=...	[more]
Q2R8S5_ORYSJ	2.4e-105	43.76	Retrotransposon protein, putative, Ty3-gypsy subclass OS=Oryza sativa subsp. jap...	[more]

BLAST of MELO3C019189 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|590612958\|ref\|XP_007022530.1\|	1.9e-132	56.51	Retrotransposon protein, putative [Theobroma cacao]	[more]
gi\|32489966\|emb\|CAE05583.1\|	9.5e-108	44.47	OSJNBa0032N05.11 [Oryza sativa Japonica Group]	[more]
gi\|34015295\|gb\|AAQ56486.1\|	1.6e-107	45.15	putative polyprotein [Oryza sativa Japonica Group]	[more]
gi\|38344420\|emb\|CAE02386.2\|	2.1e-107	44.71	OSJNBb0080H08.12 [Oryza sativa Japonica Group]	[more]
gi\|77549283\|gb\|ABA92080.1\|	3.4e-105	43.76	retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Gro...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR016197	Chromo-like_dom_sf
IPR023780	Chromo_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006333	chromatin assembly or disassembly
biological_process	GO:0015074	DNA integration
biological_process	GO:0006508	proteolysis
biological_process	GO:0006278	RNA-dependent DNA biosynthetic process
cellular_component	GO:0000785	chromatin
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003964	RNA-directed DNA polymerase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C019189T1	MELO3C019189T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016197	Chromo domain-like	unknown	SSF54160	Chromo domain-like	coord: 315..394 score: 7.5
IPR023780	Chromo domain	PFAM	PF00385	Chromo	coord: 352..399 score: 2.
None	No IPR available	unknown	Coil	Coil	coord: 234..254 scor
None	No IPR available	PANTHER	PTHR24559	FAMILY NOT NAMED	coord: 12..403 score: 1.4E
None	No IPR available	PANTHER	PTHR24559:SF207	SUBFAMILY NOT NAMED	coord: 12..403 score: 1.4E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C019189	Cucumber (Chinese Long) v3	cucmeB337
MELO3C019189	Watermelon (97103) v2	mewmbB544
MELO3C019189	Cucumber (Gy14) v1	cgymeB449
MELO3C019189	Cucurbita maxima (Rimu)	cmameB613
MELO3C019189	Cucurbita maxima (Rimu)	cmameB810
MELO3C019189	Cucurbita moschata (Rifu)	cmomeB601
MELO3C019189	Cucurbita moschata (Rifu)	cmomeB794
MELO3C019189	Wild cucumber (PI 183967)	cpimeB331
MELO3C019189	Cucumber (Chinese Long) v2	cumeB272
MELO3C019189	Watermelon (Charleston Gray)	mewcgB534
MELO3C019189	Watermelon (97103) v1	mewmB580
MELO3C019189	Cucurbita pepo (Zucchini)	cpemeB451
MELO3C019189	Cucumber (Gy14) v2	cgybmeB286