MELO3C019180 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C019180
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionType III secretion ATP synthase HrcN
Locationchr8 : 13882481 .. 13882930 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGGTTTTTATGTGCTTGAGCCACCAATAGCTAGAGAGGAAGAAGTGGATGGAATTACTTCATTGAGTGAAGCAACGAGTACGGAATCTACCGAACACACATCAAATAGGTATAGTAAGAAAAGAGCAAGAAGTGTGGATCCATCGGTAGCGGCAACGAATATTTTTGAGAATGTTATGAGCAGACACCTTTCAAGTGCTAATGATAATATTCAAGAAATTATTGCATTTTATAAACAGGTAGCTGAACGAGAGTCCACAAGAGAAGAACGTCGAAACTCATTAGCCAGTAAAATTAGAAGGATAAATAGATTAGTTCAAAAAAGGGTGAGAGCGGCTAAGATTATCACTAAAGATCAATCTCAGATTGACTATTTTTTTAATCTTCTACATGGTGAAAGATATGAATTCATAATGGAGGTTCCATATGAAGACGTTCATCCTTAA

mRNA sequence

ATGGATGGTTTTTATGTGCTTGAGCCACCAATAGCTAGAGAGGAAGAAGTGGATGGAATTACTTCATTGAGTGAAGCAACGAGTACGGAATCTACCGAACACACATCAAATAGGTATAGTAAGAAAAGAGCAAGAAGTGTGGATCCATCGGTAGCGGCAACGAATATTTTTGAGAATGTTATGAGCAGACACCTTTCAAGTGCTAATGATAATATTCAAGAAATTATTGCATTTTATAAACAGGTAGCTGAACGAGAGTCCACAAGAGAAGAACGTCGAAACTCATTAGCCAGTAAAATTAGAAGGATAAATAGATTAGTTCAAAAAAGGGTGAGAGCGGCTAAGATTATCACTAAAGATCAATCTCAGATTGACTATTTTTTTAATCTTCTACATGGTGAAAGATATGAATTCATAATGGAGGTTCCATATGAAGACGTTCATCCTTAA

Coding sequence (CDS)

ATGGATGGTTTTTATGTGCTTGAGCCACCAATAGCTAGAGAGGAAGAAGTGGATGGAATTACTTCATTGAGTGAAGCAACGAGTACGGAATCTACCGAACACACATCAAATAGGTATAGTAAGAAAAGAGCAAGAAGTGTGGATCCATCGGTAGCGGCAACGAATATTTTTGAGAATGTTATGAGCAGACACCTTTCAAGTGCTAATGATAATATTCAAGAAATTATTGCATTTTATAAACAGGTAGCTGAACGAGAGTCCACAAGAGAAGAACGTCGAAACTCATTAGCCAGTAAAATTAGAAGGATAAATAGATTAGTTCAAAAAAGGGTGAGAGCGGCTAAGATTATCACTAAAGATCAATCTCAGATTGACTATTTTTTTAATCTTCTACATGGTGAAAGATATGAATTCATAATGGAGGTTCCATATGAAGACGTTCATCCTTAA

Protein sequence

MDGFYVLEPPIAREEEVDGITSLSEATSTESTEHTSNRYSKKRARSVDPSVAATNIFENVMSRHLSSANDNIQEIIAFYKQVAERESTREERRNSLASKIRRINRLVQKRVRAAKIITKDQSQIDYFFNLLHGERYEFIMEVPYEDVHP*
Homology
[Close]
BLAST of MELO3C019180 vs. TrEMBL
Match: A0A0A0L2J4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G099560 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-08
Identity = 36/55 (65.45%), Postives = 41/55 (74.55%), Query Frame = 1 

Query: 1  MDGFYVLEPPIAREEEVDGITSLSEATSTEST--EHTSNRYSKKRARSVDPSVAA 54
          MD FYVLEPPI   EEVDG  S+SEAT+   +   HTSNR+SKKRARSVD  VA+
Sbjct: 1  MDSFYVLEPPITGGEEVDGYASMSEATTNTQSYRAHTSNRFSKKRARSVDLLVAS 55

[Close]
BLAST of MELO3C019180 vs. NCBI nr
Match: gi|700201062|gb|KGN56195.1| (hypothetical protein Csa_3G099560 [Cucumis sativus])

HSP 1 Score: 67.8 bits (164), Expect = 1.9e-08
Identity = 36/55 (65.45%), Postives = 41/55 (74.55%), Query Frame = 1 

Query: 1  MDGFYVLEPPIAREEEVDGITSLSEATSTEST--EHTSNRYSKKRARSVDPSVAA 54
          MD FYVLEPPI   EEVDG  S+SEAT+   +   HTSNR+SKKRARSVD  VA+
Sbjct: 1  MDSFYVLEPPITGGEEVDGYASMSEATTNTQSYRAHTSNRFSKKRARSVDLLVAS 55

The following BLAST results are available for this feature:
BLAST of MELO3C019180 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L2J4_CUCSA1.3e-0865.45Uncharacterized protein OS=Cucumis sativus GN=Csa_3G099560 PE=4 SV=1[more]
BLAST of MELO3C019180 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700201062|gb|KGN56195.1|1.9e-0865.45hypothetical protein Csa_3G099560 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019180T1MELO3C019180T1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C019180Cucumber (Gy14) v2cgybmeB286
MELO3C019180Cucumber (Chinese Long) v3cucmeB337
MELO3C019180Watermelon (97103) v2mewmbB544
MELO3C019180Cucumber (Gy14) v1cgymeB449
MELO3C019180Cucurbita maxima (Rimu)cmameB613
MELO3C019180Cucurbita maxima (Rimu)cmameB810
MELO3C019180Cucurbita moschata (Rifu)cmomeB601
MELO3C019180Cucurbita moschata (Rifu)cmomeB794
MELO3C019180Wild cucumber (PI 183967)cpimeB331
MELO3C019180Cucumber (Chinese Long) v2cumeB272
MELO3C019180Watermelon (Charleston Gray)mewcgB534
MELO3C019180Watermelon (97103) v1mewmB580
MELO3C019180Cucurbita pepo (Zucchini)cpemeB451