MELO3C019179 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C019179
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionTranscription initiation factor iib, putative
Locationchr8 : 13848911 .. 13855524 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCCCTTTCAATTTCCCTCCCTCATCGTCGAAATCTATTACCGACGCCTCGCCTGAGCAGCCAATACCAATTTCTCCCTGGAACCAACATTCATCTCTCTTCTGCTCTCCAATTCCCCGCTTGCTCAAGCTTTTTTAGGGTTTAGAAGAGCCCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCTGGTTGTGAACAATGTCTGATGCGTTCTGCTCTGACTGCAAGCGTCAGACTGAGGTTGTTTTTGACCATTCCGCCGGAGATACGGTGTGTTCCGAGTGTGGTCTTGTCCTTGAATCCCACTCCATCGATGAGACCTCCGAGTGGAGGACTTTTGCCAATGAGTCTGGGGATAACGACCCGGTTCGTGTTGGTGGACCCACAAATCCTCTTTTGGCTGATGGTGGACTTTCCACGGTGATTGCGAAGCCTAATGGTACCACTGGGGAGTTCTTGTCCTCGTCTTTGGGTCGGTGGCAGAATCGTGGCTCCAATCCAGATCGAGGGTTGATTCTTGCTTTCAAGACCATTGCTACTATGTCTGATAGGTAAGGGGGTTTGATGTTTTGGATGCTGCTGAGGAAATTGGTATTTGTTGGATGTTTCTTGATTGAGCTGAATCTTGATTTCCTTTCCTAACCCATATAGGCTTATACAGATCGAATTGGGACTGTGGAGGGGTGGGAATTGGGAAATCTTACTAAATTAAGGTTTTTTTGTATTCGTGGGGGAACTTTTGATGATGGATACAAATTTTGTGAACTGATTGTTGGCTTGGTGGTTGTACAGGATTCGGGTCATGCAGCTGGGGCTATTGGAAAAACTTTAGTCTTTTAGAGAAACGTTTCTTTCTTTCTTGGTAGAGAAATCGATTAAAATCTTTGTATTGGTGCTCTTATCTTATTTATGGAATTGACTAATCAGAATTTAGAAACTTAGAGTTGAGCTAAGAAGTCGTGTAAATGAAAAGCCTATCTGGGTAGATCTTTTGGAGGAGAATATCGACTTGAAACATATACTCATGCTGTAGATGTGCATCTATGTAGTTGCGGTGAATTTGATAAAAAGGTTCTTCAGGTCTGGAATGCCAAGGAACAAAACGTTTTGAGTTGAATTTTCTTGTATCTTTTGTTTATTTCTTCAATATTCTGGCAAGCGACTTTGTTGGTGCAATGAGAATGGTATATGTTAAGTTCACTCAATTAGGTCGATTTACCTTGTTGCTTTGGAGTTTCGAGTTTTTTTATTCATATTGGGAGAAGCCACTTCTCTAATTGGAATTAAGTAGTGAATAAACTTAGTGTATACTCTTTCCATCTAATGTTTGAAAATTTTCTGTTATCGGCCTTGCCACAAGATGGTCATGGATCGTTCTATGGGATTTTCGTATTTTAGTTCATTTTATGGTCTTCTTGCACTGTAATTATAGTTTTTGGGATGCTTAGTATAAGTAACCCAACTTTGAGTTATGATAAAGATGAGACTGATTCATAATGTTTAATAAATATATGAGTTTGTCACATTTAGAAAGGTCTAATACCGCCAGCTTTATTGTGTTTCAGGTTGGGCCTTGTTGCAACCATAAAGGTATGCAGTTTTCGACCCATTATGACATAATTCCACGAGTTTCCATTTTTTGTATTTTCTAAAAGCATTCAGGTTAGTTGTCAGTATAGAATGATCATGCAGTGTTCTCAAGGTTTGAGATAATGTATGTTTCATAGTTTTTGTTAAACATTTATCTGGAAGTGATGCACAATGAATGAATGACCAAGGAATGGTCAGATACATACGGTTCAAGTTCACATACCCGCACACACACATATAGGTAAGAAACAACACTCAATATGAAAAAGGAGGTTATAAAGGATGGGAGATGTGGTCCCTGCCTAGCTATGTGGATTACAAAACGCTTCCCAGTTGGCATAAATTTGAAGAAAAGGTAATGAAAAACATTATAAAAGATTAACACCAGCATAAAGTGTAAACTTTGGACGTGGGATTCAAGACCATATGAATCGTGTGATGTAAGCCTAGAATAGAAAATAACCAAATTTTTCAGAGAGAGAAAATTCTATAATTTCTAGAGCCCTCCTCCCTACTTCTAACCAAGATTATGCATGCCTCAATAGTTGAGTCACTTTACGCACTGGTTTTTACTGGTAGTAGCCTCAGGACTACAAGTGTGTTATGACTTCATTTTGTTATTTGTAGTAACAAAACACATCTTGAAGGTAGAATGCTGTCGAGCAAGGGTAGAAAGCAGCAAAAGGAAGAGGAATTTGTGGAAAATTAACAATAGAATATTGAGACTGAATAAGGAAGTTGAAACTCCAAAGCCATAACCATTTAGCTAAAAGGGCTTTGTTACTCATCGTAAGGTTTCCAATTTCCAAACCTCTGAAAGACACTGGTCTCTCAATAACCTCATCTAATCAAACCTTTTCCTCTTCTTTAACAAATCCCTTCCTAGAGGAAGTCACACATGAATCTCTCCAAACACTTCACACCTCACACCTCACACCTCACACAGAGCCCTGAAAAGGGAGAAGAATAAATGAGCATTAAGTCCTGCCTATGAGAGACTGTTTTATGTACACTTTCATTAATTCTCATCTTTATTCAGTCTATAACAGACGTTGATTTATCACAAGTGCAGTGTGTTTCTTAAGAAAGGAACTTGGTAGAATTTTTAAAAAACACATTGTAGCTGTGATAAATCAGTGTATGTGATAGATTGAGTAAAGACAGGAATTAATTGTGTTTAAACATGACTAATGAATTTATACCACGTAGGTATTTTAATAAAATATTAAATTTATATAAGAAAAAGTCTTTATGAGGACAAATGCATAAGGAAGATAAGGAAGAGGCTTGTGGCATCTGGAAGAATGAATATCGGTGATTGAGTGAGAAAGTTGAGCATTATCAGAAGGAAACGTAGGAACAGTAAATCACACTGGTTAGTGGGTGAAAGAAAAAGAAATTATCTATAATATTGAAGAATTCTCTAGAGCAGCCAAGTAGATAATACTTGTATAAAGAAGTGTCTGTTACTCTTTCTACCTTTTGAGTAGATGAGATTCACTGAGTTTAACATCACAATAAGGAGAGCGTTAGAGTTTTTTGCCTGGGGGTGGAGAGTTTGGGTGTCTACTAAATTTTAAGTTTTGATGTTGCAATTGTACTTTTGTCTTTCCTATAAAGATGTATTTGTAGAAGGGTCTTTTTCTCGTTCCTTTTTTTTCCATGGTGTTTTTTGCATTCTCTATGTGAATAAATAGTTTTTGATTAAAAAATAGATTTGCTTCCTATCAAAAGAGGTGATTCAATGTTTTACATTTGATTGACTAAGAGGTCATAGGTTTAATCTATGGTTAGCCACTGCCTAGGAATTAATTTTCTATGAGTTTCTTTGACATCCAAATGTTGTAGGATTAGGCAAGTGATGCGAGATTAGTTGAGGTGCAAGTATAGCTGGCTCGAACACTGACACATATAAAAAATAATAATTACATATGATATGCTATTGGATCCAGATGCAATATTTAAGAAAAAAATATTCAAGTTTTTCTACTTATGATTTGGTAATGTTGGAATTATGTTTATTCATTTTGTTAAATGTTTGTGAATTTATTCTTCACAGTTGCTACATGCTGTTACAGTTCTAATGTGATTGTAGTTGCAACCATTGATAGGATAACTTGTGAAGATTACAATCTGAAGTCTTTGACTTTCTGACCAAGTTACTTTATAGTGAAATTATTCCTCCAAACTGTTAATTGCTGTAGACTAATTATTCAAACAAGGAAATTTCCTCTGGTCCAGAATAGGATAACATGAAATTATACACCTGTATTATATGATTTGGAGATCAGCTTAGTTTTAGATTGCTTTGCTCTATGTCATTCATTTCTCTAGCAAGTGAACTTTGAAAATGTTTAATTTTCTTAAATGATTTTCTCATTTATTAATTATATACAGGATCGGGCCAATGAGATATATAAAAGAGTAGAAGATCAAAAATCTAGTAGAGGAAGAAATCAAGATGCTTTATTGGCTGCTTGCTTATATATTGCTTGTCGACAAGAAGATAAACCCCGCACAGTCAAGGGTATTGATCCTTTGATATCTGGAGCATTTGTAGTTTAATTTCTGTACTTAACTAACCATGCTGATTTTGATTAGAAATTTGCTCTGTTGCCAATGGGGCAACAAAGAAGGAGATTGGGCGAGCAAAAGAATACATTGTGAAACAGTTGGGGTTGGAGACGGGTCAGTCTGTAGAGATGGGAACAATTCATGCTGGAGACTTTATGGTGAGGCTTTTGGTGAAAAAAATTCACTTCAAGTTTTCTGAAATTTGATCATGGACAACATGTCATTTGTTTCTTCTTATGTCATTTCTTTCTTAAACGGATATAGAGGCGTTTTTGTTCAAATCTTGGGATGAATAATCAAGCTGTTAAAGCTGCCCAAGAAGCTGTACAGAAATCTGAAGAGTTTGATATTAGGTAATGTTTGTTTCCTTTGGTTGTTGTTGAGCTTTCTTCATGTTTATTTGTTTGGGTGGTTAGTTAAGTATTCCCTGAACTCTGAGTAGCTACTTCTGTGTTTATGACAAAATTCACCCTGTTAACAACTACAGATCCCTCTTCTGGTCGGGCAGTAGTAGCCAATGTA

mRNA sequence

TCCCCTTTCAATTTCCCTCCCTCATCGTCGAAATCTATTACCGACGCCTCGCCTGAGCAGCCAATACCAATTTCTCCCTGGAACCAACATTCATCTCTCTTCTGCTCTCCAATTCCCCGCTTGCTCAAGCTTTTTTAGGGTTTAGAAGAGCCCAGGAGGAGGAGGAGGAGGAGGAGGAGGAGCTGGTTGTGAACAATGTCTGATGCGTTCTGCTCTGACTGCAAGCGTCAGACTGAGGTTGTTTTTGACCATTCCGCCGGAGATACGGTGTGTTCCGAGTGTGGTCTTGTCCTTGAATCCCACTCCATCGATGAGACCTCCGAGTGGAGGACTTTTGCCAATGAGTCTGGGGATAACGACCCGGTTCGTGTTGGTGGACCCACAAATCCTCTTTTGGCTGATGGTGGACTTTCCACGGTGATTGCGAAGCCTAATGGTACCACTGGGGAGTTCTTGTCCTCGTCTTTGGGTCGGTGGCAGAATCGTGGCTCCAATCCAGATCGAGGGTTGATTCTTGCTTTCAAGACCATTGCTACTATGTCTGATAGGTTGGGCCTTGTTGCAACCATAAAGGATCGGGCCAATGAGATATATAAAAGAGTAGAAGATCAAAAATCTAGTAGAGGAAGAAATCAAGATGCTTTATTGGCTGCTTGCTTATATATTGCTTGTCGACAAGAAGATAAACCCCGCACAGTCAAGGAAATTTGCTCTGTTGCCAATGGGGCAACAAAGAAGGAGATTGGGCGAGCAAAAGAATACATTGTGAAACAGTTGGGGTTGGAGACGGGTCAGTCTGTAGAGATGGGAACAATTCATGCTGGAGACTTTATGGTGAGGCTTTTGGTGAAAAAAATTCACTTCAAGTTTTCTGAAATTTGATCATGGACAACATGTCATTTGTTTCTTCTTATGTCATTTCTTTCTTAAACGGATATAGAGGCGTTTTTGTTCAAATCTTGGGATGAATAATCAAGCTGTTAAAGCTGCCCAAGAAGCTGTACAGAAATCTGAAGAGTTTGATATTAGGTAATGTTTGTTTCCTTTGGTTGTTGTTGAGCTTTCTTCATGTTTATTTGTTTGGGTGGTTAGTTAAGTATTCCCTGAACTCTGAGTAGCTACTTCTGTGTTTATGACAAAATTCACCCTGTTAACAACTACAGATCCCTCTTCTGGTCGGGCAGTAGTAGCCAATGTA

Coding sequence (CDS)

ATGTCTGATGCGTTCTGCTCTGACTGCAAGCGTCAGACTGAGGTTGTTTTTGACCATTCCGCCGGAGATACGGTGTGTTCCGAGTGTGGTCTTGTCCTTGAATCCCACTCCATCGATGAGACCTCCGAGTGGAGGACTTTTGCCAATGAGTCTGGGGATAACGACCCGGTTCGTGTTGGTGGACCCACAAATCCTCTTTTGGCTGATGGTGGACTTTCCACGGTGATTGCGAAGCCTAATGGTACCACTGGGGAGTTCTTGTCCTCGTCTTTGGGTCGGTGGCAGAATCGTGGCTCCAATCCAGATCGAGGGTTGATTCTTGCTTTCAAGACCATTGCTACTATGTCTGATAGGTTGGGCCTTGTTGCAACCATAAAGGATCGGGCCAATGAGATATATAAAAGAGTAGAAGATCAAAAATCTAGTAGAGGAAGAAATCAAGATGCTTTATTGGCTGCTTGCTTATATATTGCTTGTCGACAAGAAGATAAACCCCGCACAGTCAAGGAAATTTGCTCTGTTGCCAATGGGGCAACAAAGAAGGAGATTGGGCGAGCAAAAGAATACATTGTGAAACAGTTGGGGTTGGAGACGGGTCAGTCTGTAGAGATGGGAACAATTCATGCTGGAGACTTTATGGTGAGGCTTTTGGTGAAAAAAATTCACTTCAAGTTTTCTGAAATTTGA
Homology
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BLAST of MELO3C019179 vs. Swiss-Prot
Match: TF2B2_ARATH (Transcription initiation factor IIB-2 OS=Arabidopsis thaliana GN=TFIIB2 PE=2 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 7.3e-92
Identity = 164/178 (92.13%), Postives = 171/178 (96.07%), Query Frame = 1 

Query: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDAFCSDCKR TEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GPTNPLLADGGL+TVI+KPNG++G+FLSSSLGRWQNRGSNPDRGLI+AFKTIATM+DRLG
Sbjct: 61  GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGIDPLISGA 179
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK I  + +GA
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGA 178

[Close]
BLAST of MELO3C019179 vs. Swiss-Prot
Match: TF2B_SOYBN (Transcription initiation factor IIB OS=Glycine max GN=TFIIB1 PE=2 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 5.8e-89
Identity = 165/179 (92.18%), Postives = 166/179 (92.74%), Query Frame = 1 

Query: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDP RVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPNRVG 60

Query: 61  GPTNPLLADGGLSTVIAKPNGTTG-EFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRL 120
           GP+NPLL DGGLSTVIAKPNG  G EFLSSSLGRWQNRGSNPDR LI AFKTIATMSDRL
Sbjct: 61  GPSNPLLTDGGLSTVIAKPNGGGGGEFLSSSLGRWQNRGSNPDRALIQAFKTIATMSDRL 120

Query: 121 GLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGIDPLISGA 179
           GLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK I  + +GA
Sbjct: 121 GLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGA 179

[Close]
BLAST of MELO3C019179 vs. Swiss-Prot
Match: TF2B_ORYSJ (Transcription initiation factor IIB OS=Oryza sativa subsp. japonica GN=TFIIB PE=1 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 3.9e-85
Identity = 151/178 (84.83%), Postives = 161/178 (90.45%), Query Frame = 1 

Query: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSD+FC DCK+ TEV FDHSAGDTVC+ECGLVLE+HS+DETSEWRTFANES DNDPVRVG
Sbjct: 1   MSDSFCPDCKKHTEVAFDHSAGDTVCTECGLVLEAHSVDETSEWRTFANESSDNDPVRVG 60

Query: 61  GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GPTNPLL DGGLSTVIAKPNG  GEFLSSSLGRWQNRGSNPDR LILAF+TIA M+DRLG
Sbjct: 61  GPTNPLLTDGGLSTVIAKPNGAQGEFLSSSLGRWQNRGSNPDRSLILAFRTIANMADRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGIDPLISGA 179
           LVATIKDRANEIYK+VED KS RGRNQDA+LAACLYIACRQED+PRTVK I  + +GA
Sbjct: 121 LVATIKDRANEIYKKVEDLKSIRGRNQDAILAACLYIACRQEDRPRTVKEICSVANGA 178

[Close]
BLAST of MELO3C019179 vs. Swiss-Prot
Match: TF2B1_ARATH (Transcription initiation factor IIB-1 OS=Arabidopsis thaliana GN=TFIIB1 PE=1 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 1.8e-82
Identity = 147/178 (82.58%), Postives = 163/178 (91.57%), Query Frame = 1 

Query: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDA+C+DCK++TE+V DHSAGDT+CSECGLVLESHSIDETSEWRTFANES ++DP RVG
Sbjct: 1   MSDAYCTDCKKETELVVDHSAGDTLCSECGLVLESHSIDETSEWRTFANESSNSDPNRVG 60

Query: 61  GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GPTNPLLAD  L+TVIAKPNG++G+FLSSSLGRWQNR SN DRGLI AFKTIATMS+RLG
Sbjct: 61  GPTNPLLADSALTTVIAKPNGSSGDFLSSSLGRWQNRNSNSDRGLIQAFKTIATMSERLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGIDPLISGA 179
           LVATIKDRANE+YKR+EDQKSSRGRNQDAL AACLYIACRQEDKPRT+K I  + +GA
Sbjct: 121 LVATIKDRANELYKRLEDQKSSRGRNQDALYAACLYIACRQEDKPRTIKEICVIANGA 178

[Close]
BLAST of MELO3C019179 vs. Swiss-Prot
Match: TF2B_DROME (Transcription initiation factor IIB OS=Drosophila melanogaster GN=TfIIB PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 9.4e-39
Identity = 85/168 (50.60%), Postives = 109/168 (64.88%), Query Frame = 1 

Query: 6   CSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGGPTNP 65
           C     ++ ++ D+ AGD +CSECGLV+    ID  SEWRTF+NE    DP RVGGP NP
Sbjct: 13  CCYAHPESPLIEDYRAGDMICSECGLVVGDRVIDVGSEWRTFSNEKSGVDPSRVGGPENP 72

Query: 66  LLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRG--SNPDRGLILAFKTIATMSDRLGLVA 125
           LL+ G LST+I    G+   F +    ++QNR   S+ DR LI AFK I++M+DR+ L  
Sbjct: 73  LLSGGDLSTIIGPGTGSAS-FDAFGAPKYQNRRTMSSSDRSLISAFKEISSMADRINLPK 132

Query: 126 TIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGI 172
           TI DRAN ++K+V D K+ +GR+ DA  +ACLYIACRQE  PRT K I
Sbjct: 133 TIVDRANNLFKQVHDGKNLKGRSNDAKASACLYIACRQEGVPRTFKEI 179

[Close]
BLAST of MELO3C019179 vs. TrEMBL
Match: A0A0A0KYQ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G415910 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 4.6e-93
Identity = 172/178 (96.63%), Postives = 174/178 (97.75%), Query Frame = 1 

Query: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61  GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGIDPLISGA 179
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK I  + +GA
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGA 178

[Close]
BLAST of MELO3C019179 vs. TrEMBL
Match: M5VR75_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008972mg PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 1.1e-91
Identity = 169/178 (94.94%), Postives = 173/178 (97.19%), Query Frame = 1 

Query: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDA+CSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GPTNPLLADGGLSTVIAKPNG +GEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61  GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGIDPLISGA 179
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK I  + +GA
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGA 178

[Close]
BLAST of MELO3C019179 vs. TrEMBL
Match: E6NU95_JATCU (JHL06B08.6 protein OS=Jatropha curcas GN=JHL06B08.6 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 3.3e-91
Identity = 168/178 (94.38%), Postives = 172/178 (96.63%), Query Frame = 1 

Query: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           M DAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MGDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GPTNPLLADGGLSTVIAKPNG +GEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61  GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGIDPLISGA 179
           LVATIKDRANEIYK+VEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK I  + +GA
Sbjct: 121 LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGA 178

[Close]
BLAST of MELO3C019179 vs. TrEMBL
Match: A0A059DI46_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02331 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 5.7e-91
Identity = 167/178 (93.82%), Postives = 173/178 (97.19%), Query Frame = 1 

Query: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           M+DAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MADAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GPTNPLL DGGLSTVIAKPNGT+GEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61  GPTNPLLTDGGLSTVIAKPNGTSGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGIDPLISGA 179
           LVATIKDRANEI+K+VEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK I  + +GA
Sbjct: 121 LVATIKDRANEIFKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGA 178

[Close]
BLAST of MELO3C019179 vs. TrEMBL
Match: A0A059DIR8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02331 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 5.7e-91
Identity = 167/178 (93.82%), Postives = 173/178 (97.19%), Query Frame = 1 

Query: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           M+DAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MADAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GPTNPLL DGGLSTVIAKPNGT+GEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61  GPTNPLLTDGGLSTVIAKPNGTSGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGIDPLISGA 179
           LVATIKDRANEI+K+VEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK I  + +GA
Sbjct: 121 LVATIKDRANEIFKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGA 178

[Close]
BLAST of MELO3C019179 vs. TAIR10
Match: AT3G10330.1 (AT3G10330.1 Cyclin-like family protein)

HSP 1 Score: 337.8 bits (865), Expect = 4.1e-93
Identity = 164/178 (92.13%), Postives = 171/178 (96.07%), Query Frame = 1 

Query: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDAFCSDCKR TEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAFCSDCKRHTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GPTNPLLADGGL+TVI+KPNG++G+FLSSSLGRWQNRGSNPDRGLI+AFKTIATM+DRLG
Sbjct: 61  GPTNPLLADGGLTTVISKPNGSSGDFLSSSLGRWQNRGSNPDRGLIVAFKTIATMADRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGIDPLISGA 179
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK I  + +GA
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGA 178

[Close]
BLAST of MELO3C019179 vs. TAIR10
Match: AT2G41630.1 (AT2G41630.1 transcription factor IIB)

HSP 1 Score: 306.6 bits (784), Expect = 1.0e-83
Identity = 147/178 (82.58%), Postives = 163/178 (91.57%), Query Frame = 1 

Query: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDA+C+DCK++TE+V DHSAGDT+CSECGLVLESHSIDETSEWRTFANES ++DP RVG
Sbjct: 1   MSDAYCTDCKKETELVVDHSAGDTLCSECGLVLESHSIDETSEWRTFANESSNSDPNRVG 60

Query: 61  GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GPTNPLLAD  L+TVIAKPNG++G+FLSSSLGRWQNR SN DRGLI AFKTIATMS+RLG
Sbjct: 61  GPTNPLLADSALTTVIAKPNGSSGDFLSSSLGRWQNRNSNSDRGLIQAFKTIATMSERLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGIDPLISGA 179
           LVATIKDRANE+YKR+EDQKSSRGRNQDAL AACLYIACRQEDKPRT+K I  + +GA
Sbjct: 121 LVATIKDRANELYKRLEDQKSSRGRNQDALYAACLYIACRQEDKPRTIKEICVIANGA 178

[Close]
BLAST of MELO3C019179 vs. TAIR10
Match: AT3G29380.1 (AT3G29380.1 Cyclin-like family protein)

HSP 1 Score: 138.7 bits (348), Expect = 3.7e-33
Identity = 83/187 (44.39%), Postives = 107/187 (57.22%), Query Frame = 1 

Query: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANES--GDNDPVR 60
           M +  C DCKR T +V DHS+GDT+CSECGLVLE+H I+ + EWRTFA++    D DP R
Sbjct: 1   MEEETCLDCKRPTIMVVDHSSGDTICSECGLVLEAHIIEYSQEWRTFASDDNHSDRDPNR 60

Query: 61  VGGPTNPLLADGGLSTVIAKPNGTTGEFLS----SSLGRWQNRGSNPDRGLI-LAFKTIA 120
           VG  TNP L  G L T+I KP  T    LS    S+L R  N+  N +  LI  AF+ I 
Sbjct: 61  VGAATNPFLKSGDLVTIIEKPKETASSVLSKDDISTLFRAHNQVKNHEEDLIKQAFEEIQ 120

Query: 121 TMSDRLGLVATIKDRANEIYKRVE---DQKSSRGRNQDALLAACLYIACRQEDKPRTVKG 178
            M+D L L   I  RA EI  + +   + K  RG+  +A+ AA +  ACR+    RT+K 
Sbjct: 121 RMTDALDLDIVINSRACEIVSKYDGHANTKLRRGKKLNAICAASVSTACRELQLSRTLKE 180

[Close]
BLAST of MELO3C019179 vs. TAIR10
Match: AT4G10680.1 (AT4G10680.1 transcription factor IIB (TFIIB) family protein)

HSP 1 Score: 88.2 bits (217), Expect = 5.7e-18
Identity = 57/172 (33.14%), Postives = 86/172 (50.00%), Query Frame = 1 

Query: 3   DAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVGGP 62
           D  C +CKR TE V ++  GDT+C ECG V+E++ ID+                   G  
Sbjct: 4   DGICLECKRPTETVVNYKNGDTICIECGHVIENNIIDDLD-----------------GAS 63

Query: 63  TNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQN---RGSNPDRGLILAFKTIATMSDRL 122
           TNP L  G L T+I K +G +   L+S L R QN   +    +  + +A+  I  M++ L
Sbjct: 64  TNPNLKSGHLPTIIFKLSGKSSS-LASKLRRTQNEMIKNKQEEDVIKIAYAEIERMTEAL 123

Query: 123 GLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGI 172
           GL   I + A +I  +++ +    G++   L AA +  ACRQ + P+T+K I
Sbjct: 124 GLTFGISNTACKILSKLDKKNLRGGKSLRGLCAASVSRACRQVNIPKTLKEI 157

[Close]
BLAST of MELO3C019179 vs. TAIR10
Match: AT3G57370.1 (AT3G57370.1 Cyclin family protein)

HSP 1 Score: 63.5 bits (153), Expect = 1.5e-10
Identity = 63/226 (27.88%), Postives = 91/226 (40.27%), Query Frame = 1 

Query: 6   CSDCKRQTEVVFDHSAGDTVCSECGL------------VLESHSIDETSEWRTFANESG- 65
           C  CK Q  VV DH    T C  CGL            V E+ ++       T  + +  
Sbjct: 9   CRRCK-QINVVTDHVTRRTRCFGCGLEFKYRPIGDLSPVAENDTVRLPDPTNTLLSNTDL 68

Query: 66  -------------DNDPVRVGGPTNPLLADGGLSTVIAKPNGTTGEFLS----------- 125
                        D+  + +G  + P L    ++T     NG++ +FLS           
Sbjct: 69  SIVTTEHKNGSFDDSLSLNLGNSSKPRLDPVSIATAKLM-NGSSNDFLSLGTSQNSETIT 128

Query: 126 --------SSLGRWQNRGSNP------DRGLILAFKTIATMSDRLGLVATIKDRANEIYK 181
                   S LG  Q    +P           L+  +I  +S+ L L ATIK +ANEI+K
Sbjct: 129 ASSDEFLFSDLGHLQKFSFDPLSMASTKPNKALSIVSIEAISNGLKLPATIKGQANEIFK 188

[Close]
BLAST of MELO3C019179 vs. NCBI nr
Match: gi|449465789|ref|XP_004150610.1| (PREDICTED: transcription initiation factor IIB-2 [Cucumis sativus])

HSP 1 Score: 348.6 bits (893), Expect = 6.6e-93
Identity = 172/178 (96.63%), Postives = 174/178 (97.75%), Query Frame = 1 

Query: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61  GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGIDPLISGA 179
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK I  + +GA
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGA 178

[Close]
BLAST of MELO3C019179 vs. NCBI nr
Match: gi|470137151|ref|XP_004304334.1| (PREDICTED: transcription initiation factor IIB [Fragaria vesca subsp. vesca])

HSP 1 Score: 344.0 bits (881), Expect = 1.6e-91
Identity = 169/178 (94.94%), Postives = 173/178 (97.19%), Query Frame = 1 

Query: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDA+CSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GPTNPLLADGGLSTVIAKPNG +GEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61  GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGIDPLISGA 179
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK I  + +GA
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGA 178

[Close]
BLAST of MELO3C019179 vs. NCBI nr
Match: gi|595805310|ref|XP_007202277.1| (hypothetical protein PRUPE_ppa008972mg [Prunus persica])

HSP 1 Score: 344.0 bits (881), Expect = 1.6e-91
Identity = 169/178 (94.94%), Postives = 173/178 (97.19%), Query Frame = 1 

Query: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDA+CSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GPTNPLLADGGLSTVIAKPNG +GEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61  GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGIDPLISGA 179
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK I  + +GA
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGA 178

[Close]
BLAST of MELO3C019179 vs. NCBI nr
Match: gi|694329429|ref|XP_009355479.1| (PREDICTED: transcription initiation factor IIB-2 [Pyrus x bretschneideri])

HSP 1 Score: 343.2 bits (879), Expect = 2.8e-91
Identity = 168/178 (94.38%), Postives = 173/178 (97.19%), Query Frame = 1 

Query: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           MSDA+CSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MSDAYCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GPTNPLLADGGLSTVIAKPNG +GEFLSSSLGRWQNRGSNPDRGLI+AFKTIATMSDRLG
Sbjct: 61  GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLIMAFKTIATMSDRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGIDPLISGA 179
           LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK I  + +GA
Sbjct: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGA 178

[Close]
BLAST of MELO3C019179 vs. NCBI nr
Match: gi|802730051|ref|XP_012086204.1| (PREDICTED: transcription initiation factor IIB-2 [Jatropha curcas])

HSP 1 Score: 342.4 bits (877), Expect = 4.8e-91
Identity = 168/178 (94.38%), Postives = 172/178 (96.63%), Query Frame = 1 

Query: 1   MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60
           M DAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG
Sbjct: 1   MGDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVG 60

Query: 61  GPTNPLLADGGLSTVIAKPNGTTGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120
           GPTNPLLADGGLSTVIAKPNG +GEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
Sbjct: 61  GPTNPLLADGGLSTVIAKPNGASGEFLSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG 120

Query: 121 LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKGIDPLISGA 179
           LVATIKDRANEIYK+VEDQKSSRGRNQDALLAACLYIACRQEDKPRTVK I  + +GA
Sbjct: 121 LVATIKDRANEIYKKVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGA 178

The following BLAST results are available for this feature:
BLAST of MELO3C019179 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TF2B2_ARATH7.3e-9292.13Transcription initiation factor IIB-2 OS=Arabidopsis thaliana GN=TFIIB2 PE=2 SV=... [more]
TF2B_SOYBN5.8e-8992.18Transcription initiation factor IIB OS=Glycine max GN=TFIIB1 PE=2 SV=1[more]
TF2B_ORYSJ3.9e-8584.83Transcription initiation factor IIB OS=Oryza sativa subsp. japonica GN=TFIIB PE=... [more]
TF2B1_ARATH1.8e-8282.58Transcription initiation factor IIB-1 OS=Arabidopsis thaliana GN=TFIIB1 PE=1 SV=... [more]
TF2B_DROME9.4e-3950.60Transcription initiation factor IIB OS=Drosophila melanogaster GN=TfIIB PE=2 SV=... [more]
BLAST of MELO3C019179 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KYQ5_CUCSA4.6e-9396.63Uncharacterized protein OS=Cucumis sativus GN=Csa_4G415910 PE=4 SV=1[more]
M5VR75_PRUPE1.1e-9194.94Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa008972mg PE=4 SV=1[more]
E6NU95_JATCU3.3e-9194.38JHL06B08.6 protein OS=Jatropha curcas GN=JHL06B08.6 PE=4 SV=1[more]
A0A059DI46_EUCGR5.7e-9193.82Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02331 PE=4 SV=1[more]
A0A059DIR8_EUCGR5.7e-9193.82Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02331 PE=4 SV=1[more]
BLAST of MELO3C019179 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G10330.14.1e-9392.13 Cyclin-like family protein[more]
AT2G41630.11.0e-8382.58 transcription factor IIB[more]
AT3G29380.13.7e-3344.39 Cyclin-like family protein[more]
AT4G10680.15.7e-1833.14 transcription factor IIB (TFIIB) family protein[more]
AT3G57370.11.5e-1027.88 Cyclin family protein[more]
BLAST of MELO3C019179 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449465789|ref|XP_004150610.1|6.6e-9396.63PREDICTED: transcription initiation factor IIB-2 [Cucumis sativus][more]
gi|470137151|ref|XP_004304334.1|1.6e-9194.94PREDICTED: transcription initiation factor IIB [Fragaria vesca subsp. vesca][more]
gi|595805310|ref|XP_007202277.1|1.6e-9194.94hypothetical protein PRUPE_ppa008972mg [Prunus persica][more]
gi|694329429|ref|XP_009355479.1|2.8e-9194.38PREDICTED: transcription initiation factor IIB-2 [Pyrus x bretschneideri][more]
gi|802730051|ref|XP_012086204.1|4.8e-9194.38PREDICTED: transcription initiation factor IIB-2 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000812TFIIB
IPR013137Znf_TFIIB
IPR013150TFIIB_cyclin
IPR013763Cyclin-like
IPR023486TFIIB_CS
IPR000812TFIIB
IPR013137Znf_TFIIB
IPR013150TFIIB_cyclin
IPR013763Cyclin-like
IPR023486TFIIB_CS
IPR000812TFIIB
IPR013137Znf_TFIIB
IPR013150TFIIB_cyclin
IPR013763Cyclin-like
IPR023486TFIIB_CS
Vocabulary: Biological Process
TermDefinition
GO:0006352DNA-templated transcription, initiation
GO:0006355regulation of transcription, DNA-templated
GO:0006352DNA-templated transcription, initiation
GO:0006355regulation of transcription, DNA-templated
GO:0006352DNA-templated transcription, initiation
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0017025TBP-class protein binding
GO:0008270zinc ion binding
GO:0017025TBP-class protein binding
GO:0008270zinc ion binding
GO:0017025TBP-class protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006352 DNA-templated transcription, initiation
biological_process GO:0070897 DNA-templated transcriptional preinitiation complex assembly
biological_process GO:0010183 pollen tube guidance
biological_process GO:0080092 regulation of pollen tube growth
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0006366 transcription from RNA polymerase II promoter
biological_process GO:0009960 endosperm development
biological_process GO:0006413 translational initiation
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
cellular_component GO:0005840 ribosome
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0017025 TBP-class protein binding
molecular_function GO:0046872 metal ion binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU46507melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C019179T4MELO3C019179T4mRNA
MELO3C019179T3MELO3C019179T3mRNA
MELO3C019179T2MELO3C019179T2mRNA
MELO3C019179T1MELO3C019179T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU46507MU46507transcribed_cluster