MELO3C018937 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C018937
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Rhomboid family protein
Location	chr7 : 13681612 .. 13685060 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGGAAGCCTCTTCTCAACTCCGAAAACCTAACCTACCCTCCAAATATATATTCTTCCCTTTTCTTCATTAGCTCAAATATACGCTCAAAGGTTCAAATCATGGCTGTTCCCACTTTTTTCCAAATAAGAAACTTTAACGACTTGCTTAATCCAACGCAAACGATTTCCAAGCCTAATAAGAGAGTATGTATTTGCAAATGCGATGTTGTGGTTTCAAAGAATAATCTACCAATTTTGGTCACCTACTCCAAACATCATAATTGGGAAATACATAATAATGATTCATCTGTCGTCAAAATCTCGACGAGAGCGAGGAAGTCGATAGGAGGGTTGAAAGCATTATTGCAACATGTGAGATGTAGTAATGGTTTGAATTTTGAGTACTCAAAAGTATTAGAAAAATTAAGTCAGGTTTGGAAGTGTACTACCAATGAGAAACAATTGAGATCATTGGGTTCTTATTTTGGAAGACTTCAAGGTCTTGGGGATAAGAAAAATTTAGATTCTTTAAAGAAGATGAAAGTTCTTGATACAGGTCAGTTCAAAGCAAAGAAGGAGCTTCAATTGCTTGATGCTTATTTTCAAAAAGTTGATAAAGGTAAACTCTTTTGGATCCAAATTCATTTATATGTTATTGTTCTATTTTTAATGATTTATCTCTCTAAACTAGTATAGATAGATATTAGCGTTTCAATCCTCCTTAAATTCAAAAGTTTAAGTAGATAAATTATTGTAAGTTTAAATATCTATATATTATATCATGAATTCATTGTATTTATATTAGTTAAAATACGTAAATCCACTTTTGGTTTTTAGCTTTTTTCTTGTGTAGTTTCAAGTATTTTATTTTATTCCAATTTTTAAAAAGAAAATTATCATTTAATTTTCTATAGTTGACTAGTTCGCGTAGAATTGACCTTTTAAAACATTATTAAATCTATGCATACAGTAAATTCGTTCATGTAGATTACTACTTTTAGATAAATGAATGAAAATGCCTATATATGTATGTATATCAGATTTTTTTTCTTTTTGGGGAATATAGTGCCCCTATATATATCAGATATTTTGTTTAAGGGTTATGACAAATGGAAGTTTCTTTTTCTTTTTTTGAGTTCTTACTTTACGCAAGTTGGTTGGGAGAGATTCTGTCCTTCTAGTCGGTATAGTTCTTACTTTATGCAAGTTGAGATAACAACTTTAATTAATGTTTTTTTTTATAAATGCAAATGTCAGTCATAAAAACTAGTTAAAAGTTCATAATAATCCAAAAAATAGAACCAACATAGAAACCTTTAAATCATTTAATATCGTAGCAATTTGTAGCCATTTCAGAATTTGATATCTATAGCAGATACAGATTTGCACAAACATCCTCTATCTAGTTTTGATGATCAACAAGAAGGCAAATTGGTGTTCACAACATCTCCTTTCGAAGATTATGTTAAAGATGACGACAAGTCGCAAATACAACACGTGAAACTGAGCGGTATGACTCACAAAAGCATGCCAGACACAACTCAACTACAAGAAGAAGAAGTTTGTGATCTCTATTTGATGTAAGGTTCATAGTTACGATTAATTGAACGAAAACCAATGATTTTCTATAAGAAAAATACGTTTTATAAGTCATCCCAAATTCATATTTATTAATGTTTGATGCAGAATATATGTTCTAATAGGTTGCTTTTGGAAATATATATATGCAGAAGCGCTTTGGTATCCATAAATATAGCAGTTTTCTTATTTGAAATAGCAAGTCCAGTAAAAAACTCGGAACTACAACTCTTTTCACTTCCTTCTCTGTATGGAGCAAAGATCAATGAGCTGATTCTAGTAGGAGAATGGTGGAGGCTTGTTACACCTATGTTTCTGGTACAACATTGATATAACTCGGTTCGTGTTTCCATTCTATAACTGTTTTCGACATTTTATTCCATTGTCTTTCAAAAAGCGTCAATTTAAACATAGTTTAATTAAAAGTTTTCTCGATTTGGGCATTGAAATAATTTCTTTTGAATGTACTAAAATAATGCCTTGCCTATATTAACCTTTTTATAAATGCAGCATTCAGGGGTTCTTCATGTTGCTCTCAGTTGTTGGACACTTCTTACATTTGGCCGCCAAGTTTGTAGAAAATATGGTCCTTTTACATTTTTCTTGATCTATGTCTTAGGAGGAGTTTCTGGTAATCTCACAAGCTTTCTTCATACTCCTAATCCAACTGTGGGTGGGACGGTAAGCTAGCTCAAACATTTACGAAACAAAACGATGATACATTTATTGAGATGTTTATCGTTTAATGTGAACTATATATTGCACCCTTGGAGCAGGGGCCAGTGTTTGCAATGATTGGAGCTTGGCTTAGTTACCAATTCCAGAACAAAGATGTTGTGACAAAGGATGTTTCAGACAAGATGTTTTTGAAAGCATTAGTTGCAGCTGTCATAAGTTCCATTTTAAGCAATATTGGTCCCATTGATGAATGGTGAGTTAAGAAAATTTCTCATTTGAAGCAACAAAAAAAACATGCCTTACTTTTCCCTCTCCCTAGACGACTTTATAGGGTTACTAAATTGGTTATACTATAGTCCGTAGGGTTAAAATAATATTTGTTTGGTACGAGTCCTTGCTATTATATAATTTGTGTATTCGGGTATTACTATACATAAAAATAGTAAAATACTATAATAAATAATAAAATAGTAAACCATTGCAACAAAAAGAGATTAAAAATAACATAATAATATTGTTGTTAGTTATACCGTAGATTATTATAATAGCGAGGAATACCAACTATTATATGAGTTATAATACCTCATTCTATTCACTAAAAGTTGAGGGTCCAAACACTCGTACTTTTATACATCGGCAACTAAGAAACTAACAAT

mRNA sequence

AGTGGAAGCCTCTTCTCAACTCCGAAAACCTAACCTACCCTCCAAATATATATTCTTCCCTTTTCTTCATTAGCTCAAATATACGCTCAAAGGTTCAAATCATGGCTGTTCCCACTTTTTTCCAAATAAGAAACTTTAACGACTTGCTTAATCCAACGCAAACGATTTCCAAGCCTAATAAGAGAGTATGTATTTGCAAATGCGATGTTGTGGTTTCAAAGAATAATCTACCAATTTTGGTCACCTACTCCAAACATCATAATTGGGAAATACATAATAATGATTCATCTGTCGTCAAAATCTCGACGAGAGCGAGGAAGTCGATAGGAGGGTTGAAAGCATTATTGCAACATGTGAGATGTAGTAATGGTTTGAATTTTGAGTACTCAAAAGTATTAGAAAAATTAAGTCAGGTTTGGAAGTGTACTACCAATGAGAAACAATTGAGATCATTGGGTTCTTATTTTGGAAGACTTCAAGGTCTTGGGGATAAGAAAAATTTAGATTCTTTAAAGAAGATGAAAGTTCTTGATACAGGTCAGTTCAAAGCAAAGAAGGAGCTTCAATTGCTTGATGCTTATTTTCAAAAAGTTGATAAAGATACAGATTTGCACAAACATCCTCTATCTAGTTTTGATGATCAACAAGAAGGCAAATTGGTGTTCACAACATCTCCTTTCGAAGATTATGTTAAAGATGACGACAAGTCGCAAATACAACACGTGAAACTGAGCGGTATGACTCACAAAAGCATGCCAGACACAACTCAACTACAAGAAGAAGAAGTTTGTGATCTCTATTTGATAAGCGCTTTGGTATCCATAAATATAGCAGTTTTCTTATTTGAAATAGCAAGTCCAGTAAAAAACTCGGAACTACAACTCTTTTCACTTCCTTCTCTGTATGGAGCAAAGATCAATGAGCTGATTCTAGTAGGAGAATGGTGGAGGCTTGTTACACCTATGTTTCTGGTACAACATTGATATAACTCGCATTCAGGGGTTCTTCATGTTGCTCTCAGTTGTTGGACACTTCTTACATTTGGCCGCCAAGTTTGTAGAAAATATGGTCCTTTTACATTTTTCTTGATCTATGTCTTAGGAGGAGTTTCTGGTAATCTCACAAGCTTTCTTCATACTCCTAATCCAACTGTGGGTGGGACGGGGCCAGTGTTTGCAATGATTGGAGCTTGGCTTAGTTACCAATTCCAGAACAAAGATGTTGTGACAAAGGATGTTTCAGACAAGATGTTTTTGAAAGCATTAGTTGCAGCTGTCATAAGTTCCATTTTAAGCAATATTGGTCCCATTGATGAATGGTGAGTTAAGAAAATTTCTCATTTGAAGCAACAAAAAAAACATGCCTTACTTTTCCCTCTCCCTAGACGACTTTATAGGGTTACTAAATTGGTTATACTATAGTCCGTAGGGTTAAAATAATATTTGTTTGGTACGAGTCCTTGCTATTATATAATTTGTGTATTCGGGTATTACTATACATAAAAATAGTAAAATACTATAATAAATAATAAAATAGTAAACCATTGCAACAAAAAGAGATTAAAAATAACATAATAATATTGTTGTTAGTTATACCGTAGATTATTATAATAGCGAGGAATACCAACTATTATATGAGTTATAATACCTCATTCTATTCACTAAAAGTTGAGGGTCCAAACACTCGTACTTTTATACATCGGCAACTAAGAAACTAACAAT

Coding sequence (CDS)

ATGGCTGTTCCCACTTTTTTCCAAATAAGAAACTTTAACGACTTGCTTAATCCAACGCAAACGATTTCCAAGCCTAATAAGAGAGTATGTATTTGCAAATGCGATGTTGTGGTTTCAAAGAATAATCTACCAATTTTGGTCACCTACTCCAAACATCATAATTGGGAAATACATAATAATGATTCATCTGTCGTCAAAATCTCGACGAGAGCGAGGAAGTCGATAGGAGGGTTGAAAGCATTATTGCAACATGTGAGATGTAGTAATGGTTTGAATTTTGAGTACTCAAAAGTATTAGAAAAATTAAGTCAGGTTTGGAAGTGTACTACCAATGAGAAACAATTGAGATCATTGGGTTCTTATTTTGGAAGACTTCAAGGTCTTGGGGATAAGAAAAATTTAGATTCTTTAAAGAAGATGAAAGTTCTTGATACAGGTCAGTTCAAAGCAAAGAAGGAGCTTCAATTGCTTGATGCTTATTTTCAAAAAGTTGATAAAGATACAGATTTGCACAAACATCCTCTATCTAGTTTTGATGATCAACAAGAAGGCAAATTGGTGTTCACAACATCTCCTTTCGAAGATTATGTTAAAGATGACGACAAGTCGCAAATACAACACGTGAAACTGAGCGGTATGACTCACAAAAGCATGCCAGACACAACTCAACTACAAGAAGAAGAAGTTTGTGATCTCTATTTGATAAGCGCTTTGGTATCCATAAATATAGCAGTTTTCTTATTTGAAATAGCAAGTCCAGTAAAAAACTCGGAACTACAACTCTTTTCACTTCCTTCTCTGTATGGAGCAAAGATCAATGAGCTGATTCTAGTAGGAGAATGGTGGAGGCTTGTTACACCTATGTTTCTGGTACAACATTGA

Homology

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BLAST of MELO3C018937 vs. Swiss-Prot
Match: RBL9_ARATH (RHOMBOID-like protein 9, chloroplastic OS=Arabidopsis thaliana GN=RBL9 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.5e-22
Identity = 68/183 (37.16%), Postives = 98/183 (53.55%), Query Frame = 1


Query: 112 EKQLRSLGSYFGRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKADTDL 171
           +++L+ L SYFG+LQ   +K ++ +   +      +    +EL  L AY  K+ K     
Sbjct: 77  KQRLKLLDSYFGKLQNDDEKPSISTGDDID--RKAELNVNEELDSLSAYLDKLQK----- 136

Query: 172 HKHPLSSFDDQQEGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTT---QLQEE 231
                    D +   LV +T    D VK +  S    ++ +G+ + + P      + Q E
Sbjct: 137 ---------DAKSKGLVSSTL---DVVKSEGGSVASKLRKTGIENNNSPFQQFDDEDQAE 196

Query: 232 EVCDLYLISALVSINIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTP 291
           +  + Y +S L SIN+ V LFE A+PV+N+ + L SLP LYGAKIN+LIL GEWWRLVTP
Sbjct: 197 DTLNFYAVSILASINVGVCLFEAAAPVRNNNMGLLSLPLLYGAKINDLILAGEWWRLVTP 240

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BLAST of MELO3C018937 vs. TrEMBL
Match: A0A0A0L0I7_CUCSA (Rhomboid-like protein OS=Cucumis sativus GN=Csa_4G094530 PE=3 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 6.7e-134
Identity = 247/289 (85.47%), Postives = 264/289 (91.35%), Query Frame = 1


Query: 3   VPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNNDS 62
           VPTFFQIRNFN      +TISKPNKRVC+CK DVVVSK+NLP  V+YSKHH WEIH+NDS
Sbjct: 4   VPTFFQIRNFN------ETISKPNKRVCVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDS 63

Query: 63  SVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGSYF 122
           SVV ISTRARKS  GLKALL HVRCSNGL+FE+SKV EKLSQVW+C+TNEKQLRSLGSYF
Sbjct: 64  SVVTISTRARKSRRGLKALLHHVRCSNGLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYF 123

Query: 123 GRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKADTDLHKHPLSSFDDQ 182
           GRLQG+GD+KNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDK    LHKHPLSSFD+Q
Sbjct: 124 GRLQGVGDRKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKG---LHKHPLSSFDEQ 183

Query: 183 QEGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLISALVSI 242
           +EGKLVFTTSP ED VKDD+  QI+HVKLSGM HKSMP+ TQLQEEEVCDLYLISALVSI
Sbjct: 184 EEGKLVFTTSPSEDRVKDDE-LQIRHVKLSGMIHKSMPNKTQLQEEEVCDLYLISALVSI 243

Query: 243 NIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFL 292
           NIAVFLFE+ASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFL
Sbjct: 244 NIAVFLFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFL 282

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BLAST of MELO3C018937 vs. TrEMBL
Match: W9SBA5_9ROSA (Rhomboid-like protein OS=Morus notabilis GN=L484_008664 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.5e-35
Identity = 96/207 (46.38%), Postives = 129/207 (62.32%), Query Frame = 1


Query: 99  LEKLSQVWKCT---TNEKQLRSLGSYFGRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQ 158
           ++  S+VW  +   TN+KQL SL SYFG+L+   D K+L++ +      T Q  +KK L+
Sbjct: 24  IDSQSRVWCASDSNTNDKQLSSLSSYFGKLKD--DNKSLNTSESSVQSSTNQLSSKKRLE 83

Query: 159 LLDAYFQKVDKADTDLHKHPL-------SSFDDQQEGKLVFTTSPFEDYVKDDDKSQIQH 218
           +LDAY  K+DK D DL +          SS  D+   K    + PF  ++  + +   + 
Sbjct: 84  ILDAYLDKLDK-DADLEEDSANIVEPTTSSSFDEDSVKDSAVSEPF--FISKESERGKEA 143

Query: 219 VKLSGMTHKSM--PDTTQL--QEEEVCDLYLISALVSINIAVFLFEIASPVKNSELQLFS 278
              S M  +S   P ++Q+  Q++E  DLYLIS L SINIAV LFEIASPV+NSEL+L S
Sbjct: 144 KTTSNMNQRSQNSPKSSQMLQQDDETSDLYLISILASINIAVILFEIASPVRNSELELSS 203

Query: 279 LPSLYGAKINELILVGEWWRLVTPMFL 292
           LP LYGAK+N +ILVGEWWRLVTPMFL
Sbjct: 204 LPLLYGAKVNHMILVGEWWRLVTPMFL 225

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BLAST of MELO3C018937 vs. TrEMBL
Match: U5FPF7_POPTR (Rhomboid-like protein OS=Populus trichocarpa GN=POPTR_0017s13870g PE=3 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 7.1e-35
Identity = 110/285 (38.60%), Postives = 158/285 (55.44%), Query Frame = 1


Query: 23  SKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWE-IHNNDSSVVKISTRARKSIGGLKAL 82
           ++ ++R  +C C       +  + ++     NW  I+     +VK+ TR R +      L
Sbjct: 26  ARQHERGLLCACSAFAQGGSY-LSISSDVQRNWPVIYTTADVLVKVKTRGRTNASKGTIL 85

Query: 83  LQHV-RCSNGLNFEYSKVLEKLSQ--------VWKCTTNEKQLRSLGSYFGRLQGLGDKK 142
            Q + +  + ++  +   + + S+          K  TNEKQLR L SYFG+LQ    + 
Sbjct: 86  NQGLLKFQSVMDVPHLHKIHRTSRENLSVACCASKSGTNEKQLRLLDSYFGKLQDNVSEP 145

Query: 143 NLDSL-KKMKVLDTG-QFKAKKELQLLDAYFQKVDKADTDLHKHPLSSFDDQ--QEGKLV 202
           + DS  ++   LDT  Q   K+EL+ L+AY  KVDK D +L  + LS+F+D+  +E  +V
Sbjct: 146 SSDSCNERTDFLDTRVQINVKEELEYLNAYLDKVDK-DANLENNVLSTFNDEATEENPIV 205

Query: 203 FTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEE--EVCDLYLISALVSINIAV 262
              S  ++  +D+++       L     +S    ++  E+  E    YLI  L SINIAV
Sbjct: 206 KPISVSKESRRDNEERLRSFRNLRNQYVESGSRRSEALEQNYETSYFYLIGTLASINIAV 265

Query: 263 FLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFL 292
           FLFEIASPV+NSE  LFSLP LYGAKINELILVGEWWRLVTPMFL
Sbjct: 266 FLFEIASPVRNSEFALFSLPLLYGAKINELILVGEWWRLVTPMFL 308

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BLAST of MELO3C018937 vs. TrEMBL
Match: A5C9C2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003619 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 6.0e-34
Identity = 102/232 (43.97%), Postives = 135/232 (58.19%), Query Frame = 1


Query: 70  RARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCT---TNEKQLRSLGSYFGRLQ 129
           R R  + GL  +     C   ++ E +   E L  VW  +   TNEKQLR L  YFG+L 
Sbjct: 71  RHRTELHGLHRMSYTESCLRSIS-ENASQRENLGTVWSASESSTNEKQLRLLDLYFGKLH 130

Query: 130 GLGDKKNLDSL-KKMKVLD-TGQFKAKKELQLLDAYFQKVDKADTDLHKHPLSSFDDQQE 189
              D  +L S  KK +++D +GQFK K+ L+ L+ +  K++K  T  +  P S  D   E
Sbjct: 131 NEDDGSSLHSSDKKTELMDQSGQFKPKEGLRSLEDHLGKINKDATSENYLPSSPCDKIDE 190

Query: 190 GKLVFTTSPF---EDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQE--EEVCDLYLISAL 249
            K      PF   ED    D+     + +L      S P  ++ Q+  +E  DLYLIS L
Sbjct: 191 DK--HDIEPFSITEDVNPVDEGKLKSYAELRNKDGDSGPKNSREQQPYDETSDLYLISIL 250

Query: 250 VSINIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFL 292
           VSINIAV LFE+ASP++NS+L+L SLP +YGAKIN+LILVGEWWRLVTPMFL
Sbjct: 251 VSINIAVVLFELASPIRNSDLELSSLPLMYGAKINDLILVGEWWRLVTPMFL 299

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BLAST of MELO3C018937 vs. TrEMBL
Match: B9RSM3_RICCO (Rhomboid-like protein OS=Ricinus communis GN=RCOM_1727230 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.9e-33
Identity = 93/195 (47.69%), Postives = 127/195 (65.13%), Query Frame = 1


Query: 103 SQVWKCTTNEKQLRSLGSYFGRLQGLGDKKNLDSLKKMKVLD--TGQFKAKKELQLLDAY 162
           S   K + NEKQLR L SYFG+LQG  ++ + DS  +   L   + +    +ELQ L++Y
Sbjct: 43  SHASKTSINEKQLRLLDSYFGKLQGDANQPSTDSSDETTKLGNKSKEINPTEELQSLNSY 102

Query: 163 FQKVDKADTDLHKHPLSSFDD--QQEGKLVFTTSPFEDYVKDDDKSQIQHVKLSGM-THK 222
             K+ K D++L  +  S+ DD   +  KLV   S +ED  + +++     VKL     ++
Sbjct: 103 LDKLSK-DSNLENYVSSTSDDLTTESEKLV---SVYEDSKRGEEEKPKSFVKLREKDANR 162

Query: 223 SMPDTTQLQE-EEVCDLYLISALVSINIAVFLFEIASPVKNSELQLFSLPSLYGAKINEL 282
            +  +  LQ+ +E  DLYL S LVSINIAVFLFE+ASPV+NSE +LF+LP LYGAKIN+L
Sbjct: 163 GLRRSQALQQNDETSDLYLTSILVSINIAVFLFELASPVRNSEFELFTLPLLYGAKINDL 222

Query: 283 ILVGEWWRLVTPMFL 292
           ILVGEWWRL+TPMFL
Sbjct: 223 ILVGEWWRLLTPMFL 233

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BLAST of MELO3C018937 vs. TAIR10
Match: AT5G38510.1 (AT5G38510.1 Rhomboid-related intramembrane serine protease family protein)

HSP 1 Score: 108.2 bits (269), Expect = 8.6e-24
Identity = 68/183 (37.16%), Postives = 98/183 (53.55%), Query Frame = 1


Query: 112 EKQLRSLGSYFGRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKADTDL 171
           +++L+ L SYFG+LQ   +K ++ +   +      +    +EL  L AY  K+ K     
Sbjct: 77  KQRLKLLDSYFGKLQNDDEKPSISTGDDID--RKAELNVNEELDSLSAYLDKLQK----- 136

Query: 172 HKHPLSSFDDQQEGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTT---QLQEE 231
                    D +   LV +T    D VK +  S    ++ +G+ + + P      + Q E
Sbjct: 137 ---------DAKSKGLVSSTL---DVVKSEGGSVASKLRKTGIENNNSPFQQFDDEDQAE 196

Query: 232 EVCDLYLISALVSINIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTP 291
           +  + Y +S L SIN+ V LFE A+PV+N+ + L SLP LYGAKIN+LIL GEWWRLVTP
Sbjct: 197 DTLNFYAVSILASINVGVCLFEAAAPVRNNNMGLLSLPLLYGAKINDLILAGEWWRLVTP 240

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BLAST of MELO3C018937 vs. NCBI nr
Match: gi|659111112|ref|XP_008455583.1| (PREDICTED: uncharacterized protein LOC103495725 isoform X1 [Cucumis melo])

HSP 1 Score: 587.4 bits (1513), Expect = 1.4e-164
Identity = 291/291 (100.00%), Postives = 291/291 (100.00%), Query Frame = 1


Query: 1   MAVPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNN 60
           MAVPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNN
Sbjct: 1   MAVPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNN 60

Query: 61  DSSVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGS 120
           DSSVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGS
Sbjct: 61  DSSVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGS 120

Query: 121 YFGRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKADTDLHKHPLSSFD 180
           YFGRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKADTDLHKHPLSSFD
Sbjct: 121 YFGRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKADTDLHKHPLSSFD 180

Query: 181 DQQEGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLISALV 240
           DQQEGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLISALV
Sbjct: 181 DQQEGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLISALV 240

Query: 241 SINIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFL 292
           SINIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFL
Sbjct: 241 SINIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFL 291

[Close]

BLAST of MELO3C018937 vs. NCBI nr
Match: gi|659111114|ref|XP_008455584.1| (PREDICTED: uncharacterized protein LOC103495725 isoform X2 [Cucumis melo])

HSP 1 Score: 581.3 bits (1497), Expect = 9.9e-163
Identity = 290/291 (99.66%), Postives = 290/291 (99.66%), Query Frame = 1


Query: 1   MAVPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNN 60
           MAVPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNN
Sbjct: 1   MAVPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNN 60

Query: 61  DSSVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGS 120
           DSSVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGS
Sbjct: 61  DSSVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGS 120

Query: 121 YFGRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKADTDLHKHPLSSFD 180
           YFGRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDK DTDLHKHPLSSFD
Sbjct: 121 YFGRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDK-DTDLHKHPLSSFD 180

Query: 181 DQQEGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLISALV 240
           DQQEGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLISALV
Sbjct: 181 DQQEGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLISALV 240

Query: 241 SINIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFL 292
           SINIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFL
Sbjct: 241 SINIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFL 290

[Close]

BLAST of MELO3C018937 vs. NCBI nr
Match: gi|659111116|ref|XP_008455585.1| (PREDICTED: uncharacterized protein LOC103495725 isoform X3 [Cucumis melo])

HSP 1 Score: 576.2 bits (1484), Expect = 3.2e-161
Identity = 288/291 (98.97%), Postives = 288/291 (98.97%), Query Frame = 1


Query: 1   MAVPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNN 60
           MAVPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNN
Sbjct: 1   MAVPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNN 60

Query: 61  DSSVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGS 120
           DSSVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGS
Sbjct: 61  DSSVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGS 120

Query: 121 YFGRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKADTDLHKHPLSSFD 180
           YFGRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDK   DLHKHPLSSFD
Sbjct: 121 YFGRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDK---DLHKHPLSSFD 180

Query: 181 DQQEGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLISALV 240
           DQQEGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLISALV
Sbjct: 181 DQQEGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLISALV 240

Query: 241 SINIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFL 292
           SINIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFL
Sbjct: 241 SINIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFL 288

[Close]

BLAST of MELO3C018937 vs. NCBI nr
Match: gi|778691755|ref|XP_011653344.1| (PREDICTED: uncharacterized protein LOC101206746 isoform X1 [Cucumis sativus])

HSP 1 Score: 495.7 bits (1275), Expect = 5.4e-137
Identity = 250/289 (86.51%), Postives = 267/289 (92.39%), Query Frame = 1


Query: 3   VPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNNDS 62
           VPTFFQIRNFN      +TISKPNKRVC+CK DVVVSK+NLP  V+YSKHH WEIH+NDS
Sbjct: 5   VPTFFQIRNFN------ETISKPNKRVCVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDS 64

Query: 63  SVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGSYF 122
           SVV ISTRARKS  GLKALL HVRCSNGL+FE+SKV EKLSQVW+C+TNEKQLRSLGSYF
Sbjct: 65  SVVTISTRARKSRRGLKALLHHVRCSNGLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYF 124

Query: 123 GRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKADTDLHKHPLSSFDDQ 182
           GRLQG+GD+KNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKADT LHKHPLSSFD+Q
Sbjct: 125 GRLQGVGDRKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKADTGLHKHPLSSFDEQ 184

Query: 183 QEGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLISALVSI 242
           +EGKLVFTTSP ED VKDD+  QI+HVKLSGM HKSMP+ TQLQEEEVCDLYLISALVSI
Sbjct: 185 EEGKLVFTTSPSEDRVKDDE-LQIRHVKLSGMIHKSMPNKTQLQEEEVCDLYLISALVSI 244

Query: 243 NIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFL 292
           NIAVFLFE+ASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFL
Sbjct: 245 NIAVFLFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFL 286

[Close]

BLAST of MELO3C018937 vs. NCBI nr
Match: gi|778691757|ref|XP_004137292.2| (PREDICTED: uncharacterized protein LOC101206746 isoform X2 [Cucumis sativus])

HSP 1 Score: 489.6 bits (1259), Expect = 3.9e-135
Identity = 249/289 (86.16%), Postives = 266/289 (92.04%), Query Frame = 1


Query: 3   VPTFFQIRNFNDLLNPTQTISKPNKRVCICKCDVVVSKNNLPILVTYSKHHNWEIHNNDS 62
           VPTFFQIRNFN      +TISKPNKRVC+CK DVVVSK+NLP  V+YSKHH WEIH+NDS
Sbjct: 5   VPTFFQIRNFN------ETISKPNKRVCVCKWDVVVSKDNLPTFVSYSKHHTWEIHDNDS 64

Query: 63  SVVKISTRARKSIGGLKALLQHVRCSNGLNFEYSKVLEKLSQVWKCTTNEKQLRSLGSYF 122
           SVV ISTRARKS  GLKALL HVRCSNGL+FE+SKV EKLSQVW+C+TNEKQLRSLGSYF
Sbjct: 65  SVVTISTRARKSRRGLKALLHHVRCSNGLDFEHSKVSEKLSQVWECSTNEKQLRSLGSYF 124

Query: 123 GRLQGLGDKKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDKADTDLHKHPLSSFDDQ 182
           GRLQG+GD+KNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDK DT LHKHPLSSFD+Q
Sbjct: 125 GRLQGVGDRKNLDSLKKMKVLDTGQFKAKKELQLLDAYFQKVDK-DTGLHKHPLSSFDEQ 184

Query: 183 QEGKLVFTTSPFEDYVKDDDKSQIQHVKLSGMTHKSMPDTTQLQEEEVCDLYLISALVSI 242
           +EGKLVFTTSP ED VKDD+  QI+HVKLSGM HKSMP+ TQLQEEEVCDLYLISALVSI
Sbjct: 185 EEGKLVFTTSPSEDRVKDDE-LQIRHVKLSGMIHKSMPNKTQLQEEEVCDLYLISALVSI 244

Query: 243 NIAVFLFEIASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFL 292
           NIAVFLFE+ASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFL
Sbjct: 245 NIAVFLFEVASPVKNSELQLFSLPSLYGAKINELILVGEWWRLVTPMFL 285

The following BLAST results are available for this feature:

BLAST of MELO3C018937 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RBL9_ARATH	1.5e-22	37.16	RHOMBOID-like protein 9, chloroplastic OS=Arabidopsis thaliana GN=RBL9 PE=2 SV=1	[more]

BLAST of MELO3C018937 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0I7_CUCSA	6.7e-134	85.47	Rhomboid-like protein OS=Cucumis sativus GN=Csa_4G094530 PE=3 SV=1	[more]
W9SBA5_9ROSA	5.5e-35	46.38	Rhomboid-like protein OS=Morus notabilis GN=L484_008664 PE=3 SV=1	[more]
U5FPF7_POPTR	7.1e-35	38.60	Rhomboid-like protein OS=Populus trichocarpa GN=POPTR_0017s13870g PE=3 SV=1	[more]
A5C9C2_VITVI	6.0e-34	43.97	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_003619 PE=4 SV=1	[more]
B9RSM3_RICCO	3.9e-33	47.69	Rhomboid-like protein OS=Ricinus communis GN=RCOM_1727230 PE=3 SV=1	[more]

BLAST of MELO3C018937 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G38510.1	8.6e-24	37.16	Rhomboid-related intramembrane serine protease family protein	[more]

BLAST of MELO3C018937 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659111112\|ref\|XP_008455583.1\|	1.4e-164	100.00	PREDICTED: uncharacterized protein LOC103495725 isoform X1 [Cucumis melo]	[more]
gi\|659111114\|ref\|XP_008455584.1\|	9.9e-163	99.66	PREDICTED: uncharacterized protein LOC103495725 isoform X2 [Cucumis melo]	[more]
gi\|659111116\|ref\|XP_008455585.1\|	3.2e-161	98.97	PREDICTED: uncharacterized protein LOC103495725 isoform X3 [Cucumis melo]	[more]
gi\|778691755\|ref\|XP_011653344.1\|	5.4e-137	86.51	PREDICTED: uncharacterized protein LOC101206746 isoform X1 [Cucumis sativus]	[more]
gi\|778691757\|ref\|XP_004137292.2\|	3.9e-135	86.16	PREDICTED: uncharacterized protein LOC101206746 isoform X2 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002610	Peptidase_S54_rhomboid
IPR002610	Peptidase_S54_rhomboid
IPR002610	Peptidase_S54_rhomboid
IPR002610	Peptidase_S54_rhomboid
IPR022764	Peptidase_S54_rhomboid_dom
IPR002610	Peptidase_S54_rhomboid
IPR022764	Peptidase_S54_rhomboid_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004252	serine-type endopeptidase activity
GO:0004252	serine-type endopeptidase activity
GO:0004252	serine-type endopeptidase activity
GO:0004252	serine-type endopeptidase activity
GO:0004252	serine-type endopeptidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis
GO:0006508	proteolysis
GO:0006508	proteolysis
GO:0006508	proteolysis
GO:0006508	proteolysis

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane
GO:0016021	integral component of membrane
GO:0016021	integral component of membrane
GO:0016021	integral component of membrane
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004252	serine-type endopeptidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C018937T9	MELO3C018937T9	mRNA
MELO3C018937T8	MELO3C018937T8	mRNA
MELO3C018937T7	MELO3C018937T7	mRNA
MELO3C018937T6	MELO3C018937T6	mRNA
MELO3C018937T5	MELO3C018937T5	mRNA
MELO3C018937T4	MELO3C018937T4	mRNA
MELO3C018937T3	MELO3C018937T3	mRNA
MELO3C018937T2	MELO3C018937T2	mRNA
MELO3C018937T1	MELO3C018937T1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C018937	Csa4G094530	Cucumber (Chinese Long) v2	cumeB303
MELO3C018937	Cla010789	Watermelon (97103) v1	mewmB515
MELO3C018937	ClCG07G016280	Watermelon (Charleston Gray)	mewcgB487
MELO3C018937	Cla97C07G143240	Watermelon (97103) v2	mewmbB493
MELO3C018937	Bhi01G001690	Wax gourd	mewgoB581
MELO3C018937	CSPI04G08580	Wild cucumber (PI 183967)	cpimeB298
MELO3C018937	Cucsa.273120	Cucumber (Gy14) v1	cgymeB457
MELO3C018937	CmaCh01G004430	Cucurbita maxima (Rimu)	cmameB435
MELO3C018937	CmoCh01G004760	Cucurbita moschata (Rifu)	cmomeB426
MELO3C018937	Lsi07G009880	Bottle gourd (USVL1VR-Ls)	lsimeB448
MELO3C018937	Cp4.1LG02g14110	Cucurbita pepo (Zucchini)	cpemeB541
MELO3C018937	CsGy4G008420	Cucumber (Gy14) v2	cgybmeB259
MELO3C018937	Carg20392	Silver-seed gourd	carmeB0699
MELO3C018937	CsaV3_4G008810	Cucumber (Chinese Long) v3	cucmeB304

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None