MELO3C018870 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C018870
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionNucleic acid-binding, OB-fold-like protein
Locationchr1 : 3528761 .. 3530689 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATCCCAAATGTGAATGGAACGCGAAATTAATTTCTTAGGGTTAGGGTTTTGACCCTCAGGGTTCGATTTTCATTCTCCATTTCACGTTCCATTTTCATCGGCAACAGGAATTCGTTCAAATTCTTGGATTTCCATGGCGACGCCAGCAGCGAATGCTCCCGCAAAGAGGAAGCCTGTTTTCGTAAAAGTAGAAGAGCTAAAGCCTGGAACCAGCGGCCACACTCTCACCGTCAAGGTTGTGAGTTCCAAAAATGTTAAGGTTGTCAATAAAGGTGGACGATCCACCATGCTTACTGCTCGCCCTCAGCAATTAACTCGAATCTCTGAATGTCTTGTTGGTGATGAGACTGGTTCCATCGTCTTCACAGCTCGAAACGACCAAGGTGTGTTTCTCTGATGATTTTGTTTGAAAGCCTACTTTTTTCTCATCTTTTGGATGTATCCATGTGCTTGCTGAGATGATTTTGTGTAAGTTTACGATAAACGTTGAATATAATGGATGGGTTTTAGTTTCCATTTTATTGGATGTCATTCGGTGATTTTGAATTCTTTTGGAACAGTTAGTGGTCTTCATTTTTGTTTATGAAAGTTCTTGATAACTGAGAAGTTACAATACCGACTGCAAAAAACTCTCCTTTGTGGTGTTATATAATCTTAAAAAGGTGCACCAATGAAAATTTATTTAACCCTAGGAATGACTCCTCTGTGCCGAACCACCGTGAATATTTTGTTCCGTTGATTAGTTGTTTAATGGTTATTTTCTAATATAAATAGAATTTGGATGTTGAGATAATTGTATTACAAGAAGTGTAATCATAATCAAACATTGAGATTCAAGATCACTTCAAAATGCGTTTAACAAGGTCTGAAATAGGAATCCTCTTTGGGCAGAACACTTGGGTGTTTTGGATTGACTTTCTACATGCTTAAAGCTACTTTTTTTAACACTTAAAAACACTTCTTTTTAGCCATTATGTATTAGTTGCGCAAAGGGAACTACATTGTCGAAAACAGAATACAAAGGATTATTGTAGGGTAGGATATCTTTCGTTCAAGCACTTGAAAAGATCCTTAAGGACAGTTAGTGTGTGAGTTTTTTAGTCTGTGGGATTGATTGGATGTTACTGGTCGGGATAGAGCTTCTTTTATGTTTATCTCCTTCAAGTCAGGACCATTGAGATGGTGGATTTAGGTTCATGGGTGTAGACATACTTTGTCTTCATGTTGCATTGTTGTCATTTTAATTGCATGGCTGTTTGGCCCGTTTCTTTATATACTGCCTCTAACTTAGCAATTGATGTTCTTTTACGTGTCTGCTTGGTATCAACTACCTATGGCTGTGTATCGTGTATGTTATAGGTGGTAAAATGCTTGTATTGTTGGAAGTGATTAATGTTTATGGTACCAACAAATATATGTATGTATGTTTATGGTGTAATATTATCTAAACAAATGGTTGTGAACTTTGCAGTTGATATCATGAAGCCAGGAAACACTGTGACCCTAAGGAATGCAAAGATTGATATGTTCAAAGGTTCTATGAGGTTAGCAGTAGATAAATGGGGACGAGTTGAAGTAGCTGAACCAGCCAACTTTGAGGTTAAAGAAGACAACAATCTCTCACTGGTTGAATATGAATTGGTTAACGTTGAAGAATGACTTGAAATTATGCAATGTTAATTATCATGGATTTACTTTCTTTATTGTGTGGTGGACTGCTATTTAACTGGTATACATTTTCTATATGGCAACACAAAAATCTTGCTGAGAGTAATATAAGTTGATTATTGATGTGCCTAACTATGCTTAATTTGGATCTGATGTGATAAAGATCTTCAAGGGCAAAGTGCAAATGTTACTTTCTGGTCTACTTATTATTTTGAAAAGTAAATAGAATGCTTTACCAATGTACCTCTTCGTTTTGGTG

mRNA sequence

AAATCCCAAATGTGAATGGAACGCGAAATTAATTTCTTAGGGTTAGGGTTTTGACCCTCAGGGTTCGATTTTCATTCTCCATTTCACGTTCCATTTTCATCGGCAACAGGAATTCGTTCAAATTCTTGGATTTCCATGGCGACGCCAGCAGCGAATGCTCCCGCAAAGAGGAAGCCTGTTTTCGTAAAAGTAGAAGAGCTAAAGCCTGGAACCAGCGGCCACACTCTCACCGTCAAGGTTGTGAGTTCCAAAAATGTTAAGGTTGTCAATAAAGGTGGACGATCCACCATGCTTACTGCTCGCCCTCAGCAATTAACTCGAATCTCTGAATGTCTTGTTGGTGATGAGACTGGTTCCATCGTCTTCACAGCTCGAAACGACCAAGTTGATATCATGAAGCCAGGAAACACTGTGACCCTAAGGAATGCAAAGATTGATATGTTCAAAGGTTCTATGAGGTTAGCAGTAGATAAATGGGGACGAGTTGAAGTAGCTGAACCAGCCAACTTTGAGGTTAAAGAAGACAACAATCTCTCACTGGTTGAATATGAATTGGTTAACGTTGAAGAATGACTTGAAATTATGCAATGTTAATTATCATGGATTTACTTTCTTTATTGTGTGGTGGACTGCTATTTAACTGGTATACATTTTCTATATGGCAACACAAAAATCTTGCTGAGAGTAATATAAGTTGATTATTGATGTGCCTAACTATGCTTAATTTGGATCTGATGTGATAAAGATCTTCAAGGGCAAAGTGCAAATGTTACTTTCTGGTCTACTTATTATTTTGAAAAGTAAATAGAATGCTTTACCAATGTACCTCTTCGTTTTGGTG

Coding sequence (CDS)

ATGGCGACGCCAGCAGCGAATGCTCCCGCAAAGAGGAAGCCTGTTTTCGTAAAAGTAGAAGAGCTAAAGCCTGGAACCAGCGGCCACACTCTCACCGTCAAGGTTGTGAGTTCCAAAAATGTTAAGGTTGTCAATAAAGGTGGACGATCCACCATGCTTACTGCTCGCCCTCAGCAATTAACTCGAATCTCTGAATGTCTTGTTGGTGATGAGACTGGTTCCATCGTCTTCACAGCTCGAAACGACCAAGTTGATATCATGAAGCCAGGAAACACTGTGACCCTAAGGAATGCAAAGATTGATATGTTCAAAGGTTCTATGAGGTTAGCAGTAGATAAATGGGGACGAGTTGAAGTAGCTGAACCAGCCAACTTTGAGGTTAAAGAAGACAACAATCTCTCACTGGTTGAATATGAATTGGTTAACGTTGAAGAATGA

Protein sequence

MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVAEPANFEVKEDNNLSLVEYELVNVEE*
Homology
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BLAST of MELO3C018870 vs. Swiss-Prot
Match: Y4844_ARATH (Uncharacterized protein At4g28440 OS=Arabidopsis thaliana GN=At4g28440 PE=1 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 2.6e-47
Identity = 93/142 (65.49%), Postives = 108/142 (76.06%), Query Frame = 1 

Query: 2   ATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLT 61
           A     +  KRKPVFVKVE+LKPGT+GHTLTVKV+ +  V  V +  R     +RP Q +
Sbjct: 8   AVATGTSTVKRKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPS 67

Query: 62  RISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVAE 121
           RI ECL+GDETG I+FTARNDQVD+MKPG TV LRN++IDMFKG+MRL VDKWGR+E   
Sbjct: 68  RIVECLIGDETGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATG 127

Query: 122 PANFEVKEDNNLSLVEYELVNV 144
            A+F VKEDNNLSLVEYEL+NV
Sbjct: 128 AASFTVKEDNNLSLVEYELINV 149

[Close]
BLAST of MELO3C018870 vs. TrEMBL
Match: A0A0A0K1C6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G038160 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 1.5e-73
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 1 

Query: 1   MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQL 60
           MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQL
Sbjct: 1   MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQL 60

Query: 61  TRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVA 120
           TRISECLVGDETGSIVFTARNDQVD+MKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVA
Sbjct: 61  TRISECLVGDETGSIVFTARNDQVDLMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVA 120

Query: 121 EPANFEVKEDNNLSLVEYELVNVEE 146
           EPANFE KEDNNLSLVEYELVNVEE
Sbjct: 121 EPANFEAKEDNNLSLVEYELVNVEE 145

[Close]
BLAST of MELO3C018870 vs. TrEMBL
Match: W9RPM9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_001332 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 7.6e-54
Identity = 117/150 (78.00%), Postives = 127/150 (84.67%), Query Frame = 1 

Query: 1   MATPAANAPA----KRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKG-GRST-MLT 60
           MAT   NA      KRKPVF  V++LKPGTSGHTLTVKVVSSK VKV N+G GRS+ M+ 
Sbjct: 1   MATATTNATGMVTEKRKPVFKTVDQLKPGTSGHTLTVKVVSSKPVKVGNRGTGRSSAMVM 60

Query: 61  ARPQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKW 120
            RP Q TRISECLVGD+TG+I+FTARNDQVDIM PG TV LRNAKIDMFKG+MRLAVDKW
Sbjct: 61  NRPSQPTRISECLVGDDTGTILFTARNDQVDIMTPGTTVILRNAKIDMFKGTMRLAVDKW 120

Query: 121 GRVEVAEPANFEVKEDNNLSLVEYELVNVE 145
           GRVEV EPANFEVKEDNNLSLVEYELVNV+
Sbjct: 121 GRVEVTEPANFEVKEDNNLSLVEYELVNVD 150

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BLAST of MELO3C018870 vs. TrEMBL
Match: M5VHB0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012918mg PE=4 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 9.9e-54
Identity = 109/144 (75.69%), Postives = 123/144 (85.42%), Query Frame = 1 

Query: 2   ATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLT 61
           A+ +    AKRKPVFVKV++L+P TSGHTLTVKVVSSK VKV NK G     ++RP Q +
Sbjct: 6   ASGSGTVTAKRKPVFVKVDQLQPNTSGHTLTVKVVSSKPVKVTNKNGGRPSFSSRPLQPS 65

Query: 62  RISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVAE 121
           RI+ECLVGDETG+I+FTARNDQVD MKP  TV LRNAKIDMFKG+MRLAVDKWGRVEV E
Sbjct: 66  RIAECLVGDETGTILFTARNDQVDTMKPDTTVILRNAKIDMFKGTMRLAVDKWGRVEVTE 125

Query: 122 PANFEVKEDNNLSLVEYELVNVEE 146
           PANF+VKE+NNLSLVEYELVNVEE
Sbjct: 126 PANFQVKEENNLSLVEYELVNVEE 149

[Close]
BLAST of MELO3C018870 vs. TrEMBL
Match: V7BXN5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G101100g PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.1e-52
Identity = 108/141 (76.60%), Postives = 125/141 (88.65%), Query Frame = 1 

Query: 6   ANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVV-NKGGRSTMLTARPQQLTRIS 65
           A    KRKPVFVKV++LKPGT+GHTLTVKVVSSK VK V N+GGRS++LTARP   +RI+
Sbjct: 7   ATTTTKRKPVFVKVDQLKPGTNGHTLTVKVVSSKPVKTVSNRGGRSSVLTARP---SRIA 66

Query: 66  ECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVAEPAN 125
           EC+VGDETG+I+FTARN+QVD+M  G ++TLRNAKIDMFKGSMRLAVD+WGR+E  EPAN
Sbjct: 67  ECVVGDETGTIIFTARNEQVDLMNAGASLTLRNAKIDMFKGSMRLAVDRWGRIEATEPAN 126

Query: 126 FEVKEDNNLSLVEYELVNVEE 146
           FEVKEDNNLSLVEYELVNV E
Sbjct: 127 FEVKEDNNLSLVEYELVNVVE 144

[Close]
BLAST of MELO3C018870 vs. TrEMBL
Match: A0A0S3SHE6_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G100300 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 4.1e-52
Identity = 108/141 (76.60%), Postives = 124/141 (87.94%), Query Frame = 1 

Query: 6   ANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVV-NKGGRSTMLTARPQQLTRIS 65
           A    KRKPVFVKV++L PGT+GHTLTVKVVSSK VK V N+GGRS++LTARP   +RI+
Sbjct: 2   ATTMTKRKPVFVKVDQLTPGTNGHTLTVKVVSSKPVKTVSNRGGRSSVLTARP---SRIA 61

Query: 66  ECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVAEPAN 125
           ECLVGDETG+I+FTARN+QVD+M  G T+TLRNAKIDMFKGSMRLAVD+WGR+E  EPA+
Sbjct: 62  ECLVGDETGTIIFTARNEQVDLMNAGATLTLRNAKIDMFKGSMRLAVDRWGRIEATEPAD 121

Query: 126 FEVKEDNNLSLVEYELVNVEE 146
           FEVKEDNNLSLVEYELVNV E
Sbjct: 122 FEVKEDNNLSLVEYELVNVVE 139

[Close]
BLAST of MELO3C018870 vs. TAIR10
Match: AT4G28440.1 (AT4G28440.1 Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 189.5 bits (480), Expect = 1.5e-48
Identity = 93/142 (65.49%), Postives = 108/142 (76.06%), Query Frame = 1 

Query: 2   ATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLT 61
           A     +  KRKPVFVKVE+LKPGT+GHTLTVKV+ +  V  V +  R     +RP Q +
Sbjct: 8   AVATGTSTVKRKPVFVKVEQLKPGTTGHTLTVKVIEANIVVPVTRKTRPASSLSRPSQPS 67

Query: 62  RISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVAE 121
           RI ECL+GDETG I+FTARNDQVD+MKPG TV LRN++IDMFKG+MRL VDKWGR+E   
Sbjct: 68  RIVECLIGDETGCILFTARNDQVDLMKPGATVILRNSRIDMFKGTMRLGVDKWGRIEATG 127

Query: 122 PANFEVKEDNNLSLVEYELVNV 144
            A+F VKEDNNLSLVEYEL+NV
Sbjct: 128 AASFTVKEDNNLSLVEYELINV 149

[Close]
BLAST of MELO3C018870 vs. TAIR10
Match: AT2G33845.1 (AT2G33845.1 Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 188.3 bits (477), Expect = 3.2e-48
Identity = 99/142 (69.72%), Postives = 108/142 (76.06%), Query Frame = 1 

Query: 4   PAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRI 63
           P      K+KPVFVKV++LKPGTSGHTLTVKVV   +V    K G ++    RP    RI
Sbjct: 45  PQHTPQEKKKPVFVKVDQLKPGTSGHTLTVKVVDQNSVP--QKPGAASSSHLRP---ARI 104

Query: 64  SECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVAEPA 123
           SECLVGDET  I+FTARNDQV++MKPG TV LRNAKIDMFKGSMRLAVDKWGR+E  EPA
Sbjct: 105 SECLVGDETACILFTARNDQVELMKPGATVNLRNAKIDMFKGSMRLAVDKWGRIEATEPA 164

Query: 124 NFEVKEDNNLSLVEYELVNVEE 146
           +  VKEDNNLSLVEYELVNV E
Sbjct: 165 DITVKEDNNLSLVEYELVNVVE 181

[Close]
BLAST of MELO3C018870 vs. TAIR10
Match: AT1G23750.1 (AT1G23750.1 Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 181.0 bits (458), Expect = 5.2e-46
Identity = 93/134 (69.40%), Postives = 109/134 (81.34%), Query Frame = 1 

Query: 12  RKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVGDE 71
           +KP F KV++L+PGTSGH + VK+VS+K   +V + GR+    AR     RISEC+VGDE
Sbjct: 10  KKPAFTKVDQLRPGTSGHNVNVKIVSTK---MVLQKGRADGPQARQ---LRISECIVGDE 69

Query: 72  TGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVAEPANFEVKEDN 131
           TG IVFTARNDQVD+MK G+TVTLRNAKIDM+KGSMRLAVDKWGRVEV EPA+F+VKED 
Sbjct: 70  TGVIVFTARNDQVDLMKEGSTVTLRNAKIDMYKGSMRLAVDKWGRVEVTEPASFKVKEDT 129

Query: 132 NLSLVEYELVNVEE 146
           N+SL+EYELVNV E
Sbjct: 130 NMSLIEYELVNVVE 137

[Close]
BLAST of MELO3C018870 vs. TAIR10
Match: AT1G10590.3 (AT1G10590.3 Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 175.3 bits (443), Expect = 2.8e-44
Identity = 93/136 (68.38%), Postives = 108/136 (79.41%), Query Frame = 1 

Query: 10  AKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTRISECLVG 69
           A RKPVF KV EL+PGT+GH+L VKVV++K   V+ +GG   M     Q   RI+ECLVG
Sbjct: 21  ALRKPVFTKVNELRPGTNGHSLNVKVVNTK--MVMQRGGGRPMGPQSRQM--RIAECLVG 80

Query: 70  DETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVA-EPANFEVK 129
           DETG I+FTARNDQVD+MK G+ VTLRNAKIDM+KGSMRLAVD+WGRVEVA EP +  VK
Sbjct: 81  DETGIIIFTARNDQVDMMKEGSVVTLRNAKIDMYKGSMRLAVDRWGRVEVAEEPTDITVK 140

Query: 130 EDNNLSLVEYELVNVE 145
           +DNNLSL+EYELV+VE
Sbjct: 141 DDNNLSLIEYELVSVE 152

[Close]
BLAST of MELO3C018870 vs. TAIR10
Match: AT1G03810.1 (AT1G03810.1 Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 172.2 bits (435), Expect = 2.4e-43
Identity = 88/139 (63.31%), Postives = 105/139 (75.54%), Query Frame = 1 

Query: 3   TPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQLTR 62
           T A  AP KRKPVFVKV++LKPGTSGHTL VKV+ S  VK      R + LT +P    R
Sbjct: 7   TNATTAP-KRKPVFVKVDQLKPGTSGHTLIVKVLESNPVKPAI---RKSSLTQQPISSPR 66

Query: 63  ISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVAEP 122
           I+ECL+GD+TG I+FTARNDQVD+MK G TV LRNAKID+FK +MR+AVD+WGR+E+  P
Sbjct: 67  IAECLIGDDTGCILFTARNDQVDLMKTGATVILRNAKIDLFKDTMRMAVDRWGRIEITGP 126

Query: 123 ANFEVKEDNNLSLVEYELV 142
            +FEV   NNLSLVEYE++
Sbjct: 127 VSFEVNRANNLSLVEYEVI 141

[Close]
BLAST of MELO3C018870 vs. NCBI nr
Match: gi|659110951|ref|XP_008455497.1| (PREDICTED: uncharacterized protein At4g28440 [Cucumis melo])

HSP 1 Score: 285.8 bits (730), Expect = 4.2e-74
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 1 

Query: 1   MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQL 60
           MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQL
Sbjct: 1   MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQL 60

Query: 61  TRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVA 120
           TRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVA
Sbjct: 61  TRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVA 120

Query: 121 EPANFEVKEDNNLSLVEYELVNVEE 146
           EPANFEVKEDNNLSLVEYELVNVEE
Sbjct: 121 EPANFEVKEDNNLSLVEYELVNVEE 145

[Close]
BLAST of MELO3C018870 vs. NCBI nr
Match: gi|449453557|ref|XP_004144523.1| (PREDICTED: uncharacterized protein At4g28440 [Cucumis sativus])

HSP 1 Score: 283.5 bits (724), Expect = 2.1e-73
Identity = 143/145 (98.62%), Postives = 144/145 (99.31%), Query Frame = 1 

Query: 1   MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQL 60
           MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQL
Sbjct: 1   MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTARPQQL 60

Query: 61  TRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVA 120
           TRISECLVGDETGSIVFTARNDQVD+MKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVA
Sbjct: 61  TRISECLVGDETGSIVFTARNDQVDLMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVEVA 120

Query: 121 EPANFEVKEDNNLSLVEYELVNVEE 146
           EPANFE KEDNNLSLVEYELVNVEE
Sbjct: 121 EPANFEAKEDNNLSLVEYELVNVEE 145

[Close]
BLAST of MELO3C018870 vs. NCBI nr
Match: gi|658045127|ref|XP_008358240.1| (PREDICTED: uncharacterized protein At4g28440-like [Malus domestica])

HSP 1 Score: 223.0 bits (567), Expect = 3.4e-55
Identity = 114/149 (76.51%), Postives = 126/149 (84.56%), Query Frame = 1 

Query: 1   MATPAAN----APAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTAR 60
           MAT  AN      AKRKPVFVKVE+L+P T+GHTLTVKVVSSK VKV NK G  + L++R
Sbjct: 1   MATTTANNLGTVTAKRKPVFVKVEQLQPNTNGHTLTVKVVSSKPVKVTNKNGGRSSLSSR 60

Query: 61  PQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGR 120
           P Q  RI+ECLVGDETG+I+FTARNDQVD MKP  TV LRNAKIDMFKG+MRLAVDKWGR
Sbjct: 61  PTQPARIAECLVGDETGTILFTARNDQVDTMKPDTTVNLRNAKIDMFKGTMRLAVDKWGR 120

Query: 121 VEVAEPANFEVKEDNNLSLVEYELVNVEE 146
           VEV EPANF+VKEDNNLSL+EYELVNVEE
Sbjct: 121 VEVTEPANFQVKEDNNLSLIEYELVNVEE 149

[Close]
BLAST of MELO3C018870 vs. NCBI nr
Match: gi|694333053|ref|XP_009357136.1| (PREDICTED: uncharacterized protein At4g28440 [Pyrus x bretschneideri])

HSP 1 Score: 222.2 bits (565), Expect = 5.8e-55
Identity = 114/149 (76.51%), Postives = 126/149 (84.56%), Query Frame = 1 

Query: 1   MATPAAN----APAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVVNKGGRSTMLTAR 60
           MAT  AN      AKRKPVFVKVE+L+P T+GHTLTVKVVSSK VKV NK G  + L++R
Sbjct: 1   MATTTANNLGTVTAKRKPVFVKVEQLQPNTNGHTLTVKVVSSKPVKVTNKNGGRSSLSSR 60

Query: 61  PQQLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGR 120
           P Q  RI+ECLVGDETG+I+FTARNDQVD MKP  TV LRNAKIDMFKG+MRLAVDKWGR
Sbjct: 61  PIQPARIAECLVGDETGTILFTARNDQVDTMKPDTTVNLRNAKIDMFKGTMRLAVDKWGR 120

Query: 121 VEVAEPANFEVKEDNNLSLVEYELVNVEE 146
           VEV EPANF+VKEDNNLSL+EYELVNVEE
Sbjct: 121 VEVTEPANFQVKEDNNLSLIEYELVNVEE 149

[Close]
BLAST of MELO3C018870 vs. NCBI nr
Match: gi|1021561252|ref|XP_016171866.1| (PREDICTED: uncharacterized protein At4g28440-like [Arachis ipaensis])

HSP 1 Score: 219.2 bits (557), Expect = 4.9e-54
Identity = 117/147 (79.59%), Postives = 131/147 (89.12%), Query Frame = 1 

Query: 1   MATPAANAPAKRKPVFVKVEELKPGTSGHTLTVKVVSSKNVKVV-NKGGRSTMLTA-RPQ 60
           MATPAA    KRKPVFVKV++LKPGTSGHTLTVKVVSSK VK V N+GGR++ML A RP 
Sbjct: 1   MATPAA----KRKPVFVKVDQLKPGTSGHTLTVKVVSSKPVKTVSNRGGRTSMLAAARP- 60

Query: 61  QLTRISECLVGDETGSIVFTARNDQVDIMKPGNTVTLRNAKIDMFKGSMRLAVDKWGRVE 120
             +RI+ECLVGDETG+IVFTARN+QV++MKPG+T+ LRNAKIDMFKGSMRLAVDKWGR+E
Sbjct: 61  --SRIAECLVGDETGTIVFTARNEQVELMKPGSTLILRNAKIDMFKGSMRLAVDKWGRIE 120

Query: 121 VAEPANFEVKEDNNLSLVEYELVNVEE 146
           V EPA FEVKEDNNLSLVEYELVNV E
Sbjct: 121 VTEPATFEVKEDNNLSLVEYELVNVVE 140

The following BLAST results are available for this feature:
BLAST of MELO3C018870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y4844_ARATH2.6e-4765.49Uncharacterized protein At4g28440 OS=Arabidopsis thaliana GN=At4g28440 PE=1 SV=1[more]
BLAST of MELO3C018870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K1C6_CUCSA1.5e-7398.62Uncharacterized protein OS=Cucumis sativus GN=Csa_7G038160 PE=4 SV=1[more]
W9RPM9_9ROSA7.6e-5478.00Uncharacterized protein OS=Morus notabilis GN=L484_001332 PE=4 SV=1[more]
M5VHB0_PRUPE9.9e-5475.69Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012918mg PE=4 SV=1[more]
V7BXN5_PHAVU1.1e-5276.60Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_005G101100g PE=4 SV=1[more]
A0A0S3SHE6_PHAAN4.1e-5276.60Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.07G100300 PE=... [more]
BLAST of MELO3C018870 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G28440.11.5e-4865.49 Nucleic acid-binding, OB-fold-like protein[more]
AT2G33845.13.2e-4869.72 Nucleic acid-binding, OB-fold-like protein[more]
AT1G23750.15.2e-4669.40 Nucleic acid-binding, OB-fold-like protein[more]
AT1G10590.32.8e-4468.38 Nucleic acid-binding, OB-fold-like protein[more]
AT1G03810.12.4e-4363.31 Nucleic acid-binding, OB-fold-like protein[more]
BLAST of MELO3C018870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110951|ref|XP_008455497.1|4.2e-74100.00PREDICTED: uncharacterized protein At4g28440 [Cucumis melo][more]
gi|449453557|ref|XP_004144523.1|2.1e-7398.62PREDICTED: uncharacterized protein At4g28440 [Cucumis sativus][more]
gi|658045127|ref|XP_008358240.1|3.4e-5576.51PREDICTED: uncharacterized protein At4g28440-like [Malus domestica][more]
gi|694333053|ref|XP_009357136.1|5.8e-5576.51PREDICTED: uncharacterized protein At4g28440 [Pyrus x bretschneideri][more]
gi|1021561252|ref|XP_016171866.1|4.9e-5479.59PREDICTED: uncharacterized protein At4g28440-like [Arachis ipaensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR012340NA-bd_OB-fold
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU45148melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018870T1MELO3C018870T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU45148MU45148transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012340Nucleic acid-binding, OB-foldGENE3DG3DSA:2.40.50.140coord: 15..141
score: 3.3
IPR012340Nucleic acid-binding, OB-foldunknownSSF50249Nucleic acid-binding proteinscoord: 7..143
score: 1.5
NoneNo IPR availablePANTHERPTHR31472FAMILY NOT NAMEDcoord: 2..145
score: 5.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C018870Csa7G038160Cucumber (Chinese Long) v2cumeB530
MELO3C018870Cla015644Watermelon (97103) v1mewmB241
MELO3C018870ClCG02G002390Watermelon (Charleston Gray)mewcgB195
MELO3C018870Cla97C02G028840Watermelon (97103) v2mewmbB178
MELO3C018870Bhi05G001241Wax gourdmewgoB212
MELO3C018870CSPI07G03170Wild cucumber (PI 183967)cpimeB538
MELO3C018870Cucsa.181140Cucumber (Gy14) v1cgymeB327
MELO3C018870CmaCh11G017940Cucurbita maxima (Rimu)cmameB099
MELO3C018870CmaCh19G008880Cucurbita maxima (Rimu)cmameB461
MELO3C018870CmoCh19G009020Cucurbita moschata (Rifu)cmomeB452
MELO3C018870CmoCh11G018690Cucurbita moschata (Rifu)cmomeB090
MELO3C018870Lsi11G013920Bottle gourd (USVL1VR-Ls)lsimeB095
MELO3C018870Cp4.1LG15g07110Cucurbita pepo (Zucchini)cpemeB223
MELO3C018870Cp4.1LG04g03910Cucurbita pepo (Zucchini)cpemeB609
MELO3C018870CsGy7G002840Cucumber (Gy14) v2cgybmeB468
MELO3C018870Carg18050Silver-seed gourdcarmeB1033
MELO3C018870Carg04172Silver-seed gourdcarmeB0199
MELO3C018870CsaV3_7G003050Cucumber (Chinese Long) v3cucmeB548
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C018870Cucurbita pepo (Zucchini)cpemeB273
MELO3C018870Bottle gourd (USVL1VR-Ls)lsimeB067
MELO3C018870Cucumber (Gy14) v2cgybmeB089
MELO3C018870Cucumber (Gy14) v2cgybmeB467
MELO3C018870Cucumber (Chinese Long) v3cucmeB107
MELO3C018870Cucumber (Chinese Long) v3cucmeB547
MELO3C018870Wax gourdmewgoB235
MELO3C018870Cucurbita maxima (Rimu)cmameB513
MELO3C018870Cucurbita moschata (Rifu)cmomeB504
MELO3C018870Wild cucumber (PI 183967)cpimeB535
MELO3C018870Wild cucumber (PI 183967)cpimeB103
MELO3C018870Cucumber (Chinese Long) v2cumeB103