MELO3C018770 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C018770
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Wound-responsive family protein
Location	chr1 : 2700971 .. 2701639 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCAACAAAAATTCAAATCCAAGAAGCAAAATATTGAGAAATTTTTATAGTGAAAAAAAAAAAGGAAAATGAGTTCGTCAACAAGAGCTTTGGTTGTAGCAGCCACCGTGGGCGTCGTGGAAGCACTGAAGGATCAAGGAATATGCCGGTGGAATCATCTGTTAAGATCGGCGCACCACTACGCTAGAAACCATGTCCGGTCTATTTCTCAGGCTAAGAAGCTTTCCTCCGCCGTGCCTTCCGCCAACCGCTTCCAACAGTCGGAGGAATCTCTGAGGACGGTCATGTATCTTAGTTGTTGGGGTCCTAATAACTGAGCGCAACTCAACAAACCGTCCATAGATTACTCTCCGGTTTTGACCGGCGCTGGTCAGTTTTCGGATCGTGATCGTAATCAATTGTAGACGGTTGGGCCGCCTGTTTTCATTTTTTATTTTGGAAGGATTGTAAAAGCAATTCACTTAATTATTTAATACAATTGAAACAAAGAGAGCTTCTTCAGCACTTTAATTTCCGTTGCACGTTAATTATTTTCTTTATTAACTGGGATCAATTTTCATTCTAATTAATTAAACTCTATATCCACCTCTATCTATTGTAAAAGAAAACATGAACATAGATATTGTAAACTCCTAATTTTATCAAATTATACTCTAAATTTGTTGTTG

mRNA sequence

AACCAACAAAAATTCAAATCCAAGAAGCAAAATATTGAGAAATTTTTATAGTGAAAAAAAAAAAGGAAAATGAGTTCGTCAACAAGAGCTTTGGTTGTAGCAGCCACCGTGGGCGTCGTGGAAGCACTGAAGGATCAAGGAATATGCCGGTGGAATCATCTGTTAAGATCGGCGCACCACTACGCTAGAAACCATGTCCGGTCTATTTCTCAGGCTAAGAAGCTTTCCTCCGCCGTGCCTTCCGCCAACCGCTTCCAACAGTCGGAGGAATCTCTGAGGACGGTCATGTATCTTAGTTGTTGGGGTCCTAATAACTGAGCGCAACTCAACAAACCGTCCATAGATTACTCTCCGGTTTTGACCGGCGCTGGTCAGTTTTCGGATCGTGATCGTAATCAATTGTAGACGGTTGGGCCGCCTGTTTTCATTTTTTATTTTGGAAGGATTGTAAAAGCAATTCACTTAATTATTTAATACAATTGAAACAAAGAGAGCTTCTTCAGCACTTTAATTTCCGTTGCACGTTAATTATTTTCTTTATTAACTGGGATCAATTTTCATTCTAATTAATTAAACTCTATATCCACCTCTATCTATTGTAAAAGAAAACATGAACATAGATATTGTAAACTCCTAATTTTATCAAATTATACTCTAAATTTGTTGTTG

Coding sequence (CDS)

ATGAGTTCGTCAACAAGAGCTTTGGTTGTAGCAGCCACCGTGGGCGTCGTGGAAGCACTGAAGGATCAAGGAATATGCCGGTGGAATCATCTGTTAAGATCGGCGCACCACTACGCTAGAAACCATGTCCGGTCTATTTCTCAGGCTAAGAAGCTTTCCTCCGCCGTGCCTTCCGCCAACCGCTTCCAACAGTCGGAGGAATCTCTGAGGACGGTCATGTATCTTAGTTGTTGGGGTCCTAATAACTGA

Protein sequence

MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSANRFQQSEESLRTVMYLSCWGPNN*

Homology

[Close]

BLAST of MELO3C018770 vs. TrEMBL
Match: A0A0A0K6Y8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G046640 PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 8.7e-39
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1


Query: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60
          MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN
Sbjct: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60

Query: 61 RFQQSEESLRTVMYLSCWGPNN 83
          RFQQSEESLRTVMYLSCWGPNN
Sbjct: 61 RFQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of MELO3C018770 vs. TrEMBL
Match: A0A0A0K5N2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G046650 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 7.6e-35
Identity = 75/82 (91.46%), Postives = 77/82 (93.90%), Query Frame = 1


Query: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60
          MSSSTRAL VAATVGVVEALKDQGICRWNH+LRSAHHYARNHV S+SQAKK SSAV SAN
Sbjct: 1  MSSSTRALFVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSLSQAKKFSSAVSSAN 60

Query: 61 RFQQSEESLRTVMYLSCWGPNN 83
          R QQSEESLRTVMYLSCWGPNN
Sbjct: 61 RLQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of MELO3C018770 vs. TrEMBL
Match: A0A0A0K3P5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G046670 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 1.9e-25
Identity = 62/85 (72.94%), Postives = 69/85 (81.18%), Query Frame = 1


Query: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSS---AVP 60
          MS   +  VVAA+VGVVEALKDQGICRWNH +RS   YA+NHVRSISQAKKLSS   A  
Sbjct: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60

Query: 61 SANRFQQSEESLRTVMYLSCWGPNN 83
          S +++ QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of MELO3C018770 vs. TrEMBL
Match: I3SKC5_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 4.6e-24
Identity = 59/92 (64.13%), Postives = 72/92 (78.26%), Query Frame = 1


Query: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSA- 60
          MSS++RA  VAA+VGVVEALKDQG+CRWN ++RSA H+ +NHVRS+SQAKKLSS+  S+ 
Sbjct: 2  MSSASRAWTVAASVGVVEALKDQGLCRWNSVIRSAQHHVKNHVRSLSQAKKLSSSSSSSA 61

Query: 61 ---------NRFQQSEESLRTVMYLSCWGPNN 83
                      ++SEESLRTVMYLSCWGPNN
Sbjct: 62 MVSNRSLKEEEAKKSEESLRTVMYLSCWGPNN 93

[Close]

BLAST of MELO3C018770 vs. TrEMBL
Match: A0A0D2PKH2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G206000 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-23
Identity = 58/86 (67.44%), Postives = 70/86 (81.40%), Query Frame = 1


Query: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSA- 60
          MSS++RA VVAA++G VEALKDQGICRWN+ +RS   +A+NHVRS SQAK LSS   +A 
Sbjct: 1  MSSTSRAWVVAASIGAVEALKDQGICRWNYTVRSVVQHAKNHVRSASQAKNLSSQSSAAI 60

Query: 61 ----NRFQQSEESLRTVMYLSCWGPN 82
              N+++QSEESLRTVMYLSCWGPN
Sbjct: 61 SKGLNKYKQSEESLRTVMYLSCWGPN 86

[Close]

BLAST of MELO3C018770 vs. TAIR10
Match: AT4G10265.1 (AT4G10265.1 Wound-responsive family protein)

HSP 1 Score: 109.4 bits (272), Expect = 1.1e-24
Identity = 52/83 (62.65%), Postives = 70/83 (84.34%), Query Frame = 1


Query: 1  MSSSTRALVVAATVGVVEALKDQ-GICRWNHLLRSAHHYARNHVRSISQAKKL-SSAVPS 60
          MSS+++  +VAA++G VEALKDQ G+CRWN+++RSA+ Y RN++RS+SQAKKL SS++  
Sbjct: 1  MSSASKTWMVAASIGAVEALKDQLGVCRWNYVIRSANQYLRNNLRSVSQAKKLSSSSIDY 60

Query: 61 ANRFQQSEESLRTVMYLSCWGPN 82
           N+ +Q+EESLRTVMYLSCWGP+
Sbjct: 61 TNKTKQAEESLRTVMYLSCWGPS 83

[Close]

BLAST of MELO3C018770 vs. TAIR10
Match: AT4G10270.1 (AT4G10270.1 Wound-responsive family protein)

HSP 1 Score: 100.1 bits (248), Expect = 6.6e-22
Identity = 50/90 (55.56%), Postives = 66/90 (73.33%), Query Frame = 1


Query: 1  MSSSTRALVVAATVGVVEALKDQ-GICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSA 60
          MSS+++A  VA ++G VEALKDQ G+CRWN++LRS + + RN+VRS+SQ K+ SS+  SA
Sbjct: 1  MSSTSKAWTVAVSIGAVEALKDQLGLCRWNYILRSVNQHLRNNVRSVSQGKRFSSSSVSA 60

Query: 61 --------NRFQQSEESLRTVMYLSCWGPN 82
                   + +++EESLRTVMYLSCWGPN
Sbjct: 61 AVTSSGESEKAKKAEESLRTVMYLSCWGPN 90

[Close]

BLAST of MELO3C018770 vs. TAIR10
Match: AT4G33560.1 (AT4G33560.1 Wound-responsive family protein)

HSP 1 Score: 49.7 bits (117), Expect = 1.0e-06
Identity = 29/80 (36.25%), Postives = 38/80 (47.50%), Query Frame = 1


Query: 10 VAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSANRFQ------ 69
          VA  +  VE LKDQG+ RWN+L R  H  A   VR+I+   + S    S++         
Sbjct: 11 VATAIAAVEVLKDQGVARWNYLFRLLHKEAMARVRTITVPSRPSPPTSSSSATSIRSKPL 70

Query: 70 ---QSEESLRTVMYLSCWGP 81
               E S    M LSC+GP
Sbjct: 71 STTPFETSFEKAMGLSCFGP 90

[Close]

BLAST of MELO3C018770 vs. NCBI nr
Match: gi|449438060|ref|XP_004136808.1| (PREDICTED: uncharacterized protein LOC101223015 [Cucumis sativus])

HSP 1 Score: 167.2 bits (422), Expect = 1.2e-38
Identity = 82/82 (100.00%), Postives = 82/82 (100.00%), Query Frame = 1


Query: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60
          MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN
Sbjct: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60

Query: 61 RFQQSEESLRTVMYLSCWGPNN 83
          RFQQSEESLRTVMYLSCWGPNN
Sbjct: 61 RFQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of MELO3C018770 vs. NCBI nr
Match: gi|659110685|ref|XP_008455358.1| (PREDICTED: uncharacterized protein LOC103495544 [Cucumis melo])

HSP 1 Score: 156.4 bits (394), Expect = 2.2e-35
Identity = 76/82 (92.68%), Postives = 78/82 (95.12%), Query Frame = 1


Query: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60
          MSSSTRAL+VAATVGVVEALKDQGICRWNH+LRSAHHYARNHV SISQAKK SSAV SAN
Sbjct: 1  MSSSTRALIVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSISQAKKFSSAVSSAN 60

Query: 61 RFQQSEESLRTVMYLSCWGPNN 83
          R QQSEESLRTVMYLSCWGPNN
Sbjct: 61 RLQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of MELO3C018770 vs. NCBI nr
Match: gi|449438058|ref|XP_004136807.1| (PREDICTED: uncharacterized protein LOC101222779 [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 1.1e-34
Identity = 75/82 (91.46%), Postives = 77/82 (93.90%), Query Frame = 1


Query: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSSAVPSAN 60
          MSSSTRAL VAATVGVVEALKDQGICRWNH+LRSAHHYARNHV S+SQAKK SSAV SAN
Sbjct: 1  MSSSTRALFVAATVGVVEALKDQGICRWNHILRSAHHYARNHVGSLSQAKKFSSAVSSAN 60

Query: 61 RFQQSEESLRTVMYLSCWGPNN 83
          R QQSEESLRTVMYLSCWGPNN
Sbjct: 61 RLQQSEESLRTVMYLSCWGPNN 82

[Close]

BLAST of MELO3C018770 vs. NCBI nr
Match: gi|659110681|ref|XP_008455355.1| (PREDICTED: uncharacterized protein LOC103495542 [Cucumis melo])

HSP 1 Score: 126.3 bits (316), Expect = 2.4e-26
Identity = 64/85 (75.29%), Postives = 71/85 (83.53%), Query Frame = 1


Query: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSS---AVP 60
          MS S +  VVAA+VGVVEALKDQGICRWNH +RS   YA+NHVRSISQAKKLSS   A  
Sbjct: 1  MSCSRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAATV 60

Query: 61 SANRFQQSEESLRTVMYLSCWGPNN 83
          S +R++QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHRWKQSEESLRTVMYLSCWGPNN 85

[Close]

BLAST of MELO3C018770 vs. NCBI nr
Match: gi|449438062|ref|XP_004136809.1| (PREDICTED: uncharacterized protein LOC101202743 [Cucumis sativus])

HSP 1 Score: 122.9 bits (307), Expect = 2.7e-25
Identity = 62/85 (72.94%), Postives = 69/85 (81.18%), Query Frame = 1


Query: 1  MSSSTRALVVAATVGVVEALKDQGICRWNHLLRSAHHYARNHVRSISQAKKLSS---AVP 60
          MS   +  VVAA+VGVVEALKDQGICRWNH +RS   YA+NHVRSISQAKKLSS   A  
Sbjct: 1  MSCCRKGWVVAASVGVVEALKDQGICRWNHTIRSLQQYAKNHVRSISQAKKLSSPSAAAV 60

Query: 61 SANRFQQSEESLRTVMYLSCWGPNN 83
          S +++ QSEESLRTVMYLSCWGPNN
Sbjct: 61 SDHKWNQSEESLRTVMYLSCWGPNN 85

The following BLAST results are available for this feature:

BLAST of MELO3C018770 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K6Y8_CUCSA	8.7e-39	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G046640 PE=4 SV=1	[more]
A0A0A0K5N2_CUCSA	7.6e-35	91.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G046650 PE=4 SV=1	[more]
A0A0A0K3P5_CUCSA	1.9e-25	72.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G046670 PE=4 SV=1	[more]
I3SKC5_LOTJA	4.6e-24	64.13	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
A0A0D2PKH2_GOSRA	1.3e-23	67.44	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G206000 PE=4 SV=1	[more]

BLAST of MELO3C018770 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10265.1	1.1e-24	62.65	Wound-responsive family protein	[more]
AT4G10270.1	6.6e-22	55.56	Wound-responsive family protein	[more]
AT4G33560.1	1.0e-06	36.25	Wound-responsive family protein	[more]

BLAST of MELO3C018770 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438060\|ref\|XP_004136808.1\|	1.2e-38	100.00	PREDICTED: uncharacterized protein LOC101223015 [Cucumis sativus]	[more]
gi\|659110685\|ref\|XP_008455358.1\|	2.2e-35	92.68	PREDICTED: uncharacterized protein LOC103495544 [Cucumis melo]	[more]
gi\|449438058\|ref\|XP_004136807.1\|	1.1e-34	91.46	PREDICTED: uncharacterized protein LOC101222779 [Cucumis sativus]	[more]
gi\|659110681\|ref\|XP_008455355.1\|	2.4e-26	75.29	PREDICTED: uncharacterized protein LOC103495542 [Cucumis melo]	[more]
gi\|449438062\|ref\|XP_004136809.1\|	2.7e-25	72.94	PREDICTED: uncharacterized protein LOC101202743 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR022251	DUF3774_wound-induced

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU45953	melon EST collection version 4.0	transcribed_cluster
MU47769	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C018770T1	MELO3C018770T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU45953	MU45953	transcribed_cluster
MU47769	MU47769	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022251	Protein of unknown function wound-induced	PFAM	PF12609	DUF3774	coord: 10..80 score: 9.4
None	No IPR available	PANTHER	PTHR33090	FAMILY NOT NAMED	coord: 1..81 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C018770	Cucurbita pepo (Zucchini)	cpemeB223
MELO3C018770	Cucurbita pepo (Zucchini)	cpemeB273
MELO3C018770	Cucurbita pepo (Zucchini)	cpemeB481
MELO3C018770	Cucurbita pepo (Zucchini)	cpemeB609
MELO3C018770	Cucurbita pepo (Zucchini)	cpemeB683
MELO3C018770	Bottle gourd (USVL1VR-Ls)	lsimeB066
MELO3C018770	Bottle gourd (USVL1VR-Ls)	lsimeB095
MELO3C018770	Bottle gourd (USVL1VR-Ls)	lsimeB130
MELO3C018770	Bottle gourd (USVL1VR-Ls)	lsimeB204
MELO3C018770	Cucumber (Gy14) v2	cgybmeB468
MELO3C018770	Silver-seed gourd	carmeB0033
MELO3C018770	Silver-seed gourd	carmeB0151
MELO3C018770	Silver-seed gourd	carmeB0640
MELO3C018770	Silver-seed gourd	carmeB0715
MELO3C018770	Silver-seed gourd	carmeB0865
MELO3C018770	Cucumber (Chinese Long) v3	cucmeB039
MELO3C018770	Cucumber (Chinese Long) v3	cucmeB473
MELO3C018770	Cucumber (Chinese Long) v3	cucmeB548
MELO3C018770	Watermelon (97103) v2	mewmbB172
MELO3C018770	Watermelon (97103) v2	mewmbB178
MELO3C018770	Watermelon (97103) v2	mewmbB191
MELO3C018770	Wax gourd	mewgoB232
MELO3C018770	Wax gourd	mewgoB221
MELO3C018770	Wax gourd	mewgoB236
MELO3C018770	Melon (DHL92) v3.5.1	memeB064
MELO3C018770	Melon (DHL92) v3.5.1	memeB100
MELO3C018770	Cucumber (Gy14) v1	cgymeB021
MELO3C018770	Cucumber (Gy14) v1	cgymeB199
MELO3C018770	Cucumber (Gy14) v1	cgymeB248
MELO3C018770	Cucurbita maxima (Rimu)	cmameB099
MELO3C018770	Cucurbita maxima (Rimu)	cmameB205
MELO3C018770	Cucurbita maxima (Rimu)	cmameB461
MELO3C018770	Cucurbita maxima (Rimu)	cmameB562
MELO3C018770	Cucurbita moschata (Rifu)	cmomeB090
MELO3C018770	Cucurbita moschata (Rifu)	cmomeB190
MELO3C018770	Cucurbita moschata (Rifu)	cmomeB360
MELO3C018770	Cucurbita moschata (Rifu)	cmomeB452
MELO3C018770	Cucurbita moschata (Rifu)	cmomeB504
MELO3C018770	Cucurbita moschata (Rifu)	cmomeB553
MELO3C018770	Wild cucumber (PI 183967)	cpimeB040
MELO3C018770	Wild cucumber (PI 183967)	cpimeB538
MELO3C018770	Wild cucumber (PI 183967)	cpimeB462
MELO3C018770	Cucumber (Chinese Long) v2	cumeB040
MELO3C018770	Cucumber (Chinese Long) v2	cumeB530
MELO3C018770	Watermelon (Charleston Gray)	mewcgB208
MELO3C018770	Watermelon (Charleston Gray)	mewcgB194
MELO3C018770	Watermelon (Charleston Gray)	mewcgB195
MELO3C018770	Watermelon (97103) v1	mewmB225
MELO3C018770	Watermelon (97103) v1	mewmB238
MELO3C018770	Watermelon (97103) v1	mewmB245