MELO3C018644 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C018644
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRNA-binding family protein
Locationchr1 : 1731770 .. 1735770 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTCTTCAAGGAGTTTTCTTCTCCATCTATCTTCTCTAACCCTAACCCTAATCTTCTTCCTCTTCCTTGCACCAACATGTCTCACTTTGGAAGGTCTGGTCCTCCAGATATTACAGATACCTATTCGCTTCTCGTGCTCAACATCACCTTCCGTGCGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTCATTTATTGTCTGGTTCTGTATCTTATTCAGTTCCCACTCGGATTTTAATGTGGTTTTGTAGGTACCACTGCGGATGACCTCTACCCGCTTTTCCATAAGTATGGGAAGGTTGTTGATATCTTCATCCCCAGAGATCGAAGGTATAATTCTCTTATCTGTTGCGTTTCTATATCCCTTTTCTTCTTCTTCTTTTTATTTTTTTATATTATGGAATTTGTTGGATTTATGTAAGAGATGATTGATATCTTTATGTATATTATATATATAATAGCTGGGAAGAGTTTCTTGTTAGTTAGATTGAACGTTTAGGGGTTTAGGATTGAAGTGATTTCCTTTTTATTGATTTTCGTCTGGTTCTTATGGAATCAGTTGTACGTGACGGTGAAATGATATTCTTCATTCAACTTAAATGCTGCTTGGACTTAGTTGGGGATTTTTTGGCTCCTCTGTTTATTCATTTTTTATTGGGAATACTTTATTCTCGTTTTGATTATTTTGTTATGTTATATTGTGGTTCAGGACTGGTGATTCCAGAGGCTTTGCATTTGTGCGTTACAAATATGCAGATGAAGCCCAGAAAGCAGTGGAGAGGCTAGATGGTACACCAGCTTACTTTTTTTTTGGTTTTGTTTTTTTGTCTCCTGTTTGATTTTGTTATTGCCCTCTCCATGTGCAAGTAATTTGTGGATATGAGTTACAAGGGGAATGCTTGATACTTTTGTTTGAGGAGAGAAGGTTGATTATTGTTAGGGCGTTATTCAAATCAGTTTGGGTTTAGAAGTTCAAATTTTTCTGAAATTGATGCAGTCACTTCATTGTTATTTCTGGTTTTGAATTTCAGTTATGCCTCTATTCCTCACCGTTTGATAAGTTCTTAATGTAGTTTGCTCGGGGTACTAATCTGCTGCATGTAAATTTGAAAACGGATATATATTTATATATATTTTGATTTTGTTATGTTCCAGGCACTATGGTTGATGGACGAGAGATAACTGTTCAGTTTGCAAAATATGGTCCAAATGCAGAAAGGATGTGAGTAATGAAGTAGTGGTTTTTCGCAATAAGTTGTCATGTTTACGCTTGACGTTTTAACTTCAGATATATTTGTTTTGCTAATCCATATTATATCCATGACTAAATATGCTTTTAGTCACAAAGGGAAGATCAGCGAAGCATTTCCCAAGTCAAGATACAGGTCTAGAAGTCGAAGTCCAAGGAGACGGTAATTTTCTCCTCCACATTCACAGGAAATTTCTTTTAAGATGCTGTTTTTATTTTTTATTTTTTATATTTTTTTTAAAATTCAGATTGAATATTTGTTATCCTTGTCCTTGAAGAATCTAGTTTTGTCATTGTTGTTCCTTAATGGAATTATTATTTCACTAGCTTTAGATGTCAAGGGAAAAATCTCCTGTTGGTGTAGGATATTCGAAAAAATGATGCAGCCACAATTTTTGAACCCTTAGATTACTGTGAAACTGTTTGTGCTGTGGTTTATTGTTTACTTTGGCAAAGTTTCGTATCTGCTATCTCAGATAGAAGGTTCAAAGATATTGCGTCCATTGACCTTCATTTTCTAGAGTTGCTATGGCATGTTATTTAACATGAGATGCCATAATTGTGGCAACGTGAAATATTTTAAGATCTAAAAGGAGATTGTAGTAGTGTATTGCACTCTATATAATATTGCTAGGAGTAGGTAGTGGCGCTCAAACCTTTTTCTTTCATGGATCCAGGTTTTGTCCATTTTTAAAGCCTCTTATTATTTTGAAGTCACTTATTTGAATTCAGTACTGGCTAATGTAGTCCATTTATATTTTGATGTTCCCCAAAAATCAAATTACTTACTGTAGTTTCTTACTTTCAGATATCGGGATGATTACAGAGACAGGGATTATAGGAGGAGAAGTAGAAGCAGAAGCAGAAGCCGAAGCTTGGACAGGAGTGATCGTGATAGGCGTGGTAGAGAAAGGGAGAGGGAAAGAGACCATCGCAGACGAAGCCGGAGCATTAGTCCTAGGCGACCTAGTCCTGATTACTCCAAGGGAAGGGGAAGAGGACGCTATGATGATGAGCGAAGAAGTCGTAGTGTCAGCCGTAGCCGAAGTCGTGGCCGTAGTCGTTCTGTGGACAGGTTGTGAAGTTGTAATTTTTATCCAATTAGACAGAAGTTGGGAATTTTATAACTAATAATCTTTATCTCTTTGGGTAAAAGTGCGGATTGGGGAATTTTATTTCTAACCAGTCATTGTTTTATATGCTACAGTGGTTCTCCTGGTAGACGAAGCCCTAGTCCAAGAAGGAGTCCATCTCCTCGAAGGAGCCTCTCTCCTCGTAGGAGTCCATCTCCCAGGGATGAAAGTCCTGAAAGAAATGGTAATGGTGGTGGAAGGTCTCCAACTTCTAGGAGTGTTTCACCAAGAGGGCGACCTGCCGACTCACGAAGCCCATCCCCACAAAATTCAGATGATGTGAGTTGCTTTATGACTTACTTTTTTTGATTAGACTGGACTTGGTTTAAGTAGTTAACTATTCGCTTGCTTATGTTGACAGAAGTGAATACGGATGGGAGGAGAACTATGGACATAACCGAACAGGCAGGAATGAATGCTTTGAGGACTTGTTGATTAAAAATGTTATCAGACTATAAATTCTAGTTTTGGTAGGACTTTCCTATGGTGTTCAATTCTCATATATTGAGCTTCATGTTCCTATCTACTATCTTGTATCAGTTTGATACTTTTTACCTCTGCAGTCTGTATCCTTATTTCCAGTCATAGGTTATAGCTTCGGGACATGTTCTTCCTTTATATTTCTGCTTCTCTACTCTGTAGTACCAGTACTATGTTTTGAGCAATTGTGGTGTCTTTTTCTTTTTCCTTGTATTTTTTTAAATTTATTTGAGCCATTCTTATTCATCATGAATCCTCTATTGGATTTTATAGTTATGTTCGGGGTAAGAGTGACTGGCGCCTGATTGGCGGATGTTGATTTTGTGGCTGTTGATGCTGTTTCTATGTGATAGATGGGTGTTCGTGACTTTGATGCTGGTTGCAGCAGTTTGCTGACTTTATCAGTATGATTTGTCTATGAAGTATGATGTTGCTGTGGGAAGTTTCTTAACTAATATTCACTGGATAAAATTGTTGGTAAGGTTTTTGGTCACGTTTAAATGTTTTTTAAAAACTTAATAATGCTTTAGGATTTGATGTTTGACCTGATTATCCATTCTGGTCTATCCAAGTTTTGAAAGCACTTTCACCCGCAAGGAGATCTAGAGGCCTTGATATATAGGTTTGACCCACCTATGTTGATCGATTTTTTTTAACGCATAGCTGATGATGCATTTGAGAGGTGTATTGATTGATTTTAATGGTGAAAGTTGGTTGAAGATAATTTAGCTACAGGTTTGAACTTTTAGCCATCGTAACAAAAGTTTTTAGTTTTCTATGTTATTTGAAGGGGGTGGCTTCAAACTCACAGGTTTACTATCCCAAACATTTAGATCAATCTCTTGCTGCTTGATGTGGTGACTGACTGTATTGTAGCTTTCGGATTACACAATTGGTGCTGTGGTGTTTGATAGCAGATACGTTTGTTGATGTACGATAGACATGAGTTCGATTGGCTGTTGCTGCCCTTGTGGGGGGTGAGACTGGCAATGATGCTTCAGTTGCTCGGCAATGGCTGTATCAATGCTTGCTTTCCTTTAAATATAAGGGTCTGCATGTATAGTGGCTTAACATCTCCTGTAAGAAAATTTATTTATGAAGAATTATAATATCGATTTGCAAAATTCGGTT

mRNA sequence

CTTTCTTCAAGGAGTTTTCTTCTCCATCTATCTTCTCTAACCCTAACCCTAATCTTCTTCCTCTTCCTTGCACCAACATGTCTCACTTTGGAAGGTCTGGTCCTCCAGATATTACAGATACCTATTCGCTTCTCGTGCTCAACATCACCTTCCGTACCACTGCGGATGACCTCTACCCGCTTTTCCATAAGTATGGGAAGGTTGTTGATATCTTCATCCCCAGAGATCGAAGGACTGGTGATTCCAGAGGCTTTGCATTTGTGCGTTACAAATATGCAGATGAAGCCCAGAAAGCAGTGGAGAGGCTAGATGGCACTATGGTTGATGGACGAGAGATAACTGTTCAGTTTGCAAAATATGGTCCAAATGCAGAAAGGATTCACAAAGGGAAGATCAGCGAAGCATTTCCCAAGTCAAGATACAGGTCTAGAAGTCGAAGTCCAAGGAGACGATATCGGGATGATTACAGAGACAGGGATTATAGGAGGAGAAGTAGAAGCAGAAGCAGAAGCCGAAGCTTGGACAGGAGTGATCGTGATAGGCGTGGTAGAGAAAGGGAGAGGGAAAGAGACCATCGCAGACGAAGCCGGAGCATTAGTCCTAGGCGACCTAGTCCTGATTACTCCAAGGGAAGGGGAAGAGGACGCTATGATGATGAGCGAAGAAGTCGTAGTGTCAGCCGTAGCCGAAGTCGTGGCCGTAGTCGTTCTGTGGACAGTGGTTCTCCTGGTAGACGAAGCCCTAGTCCAAGAAGGAGTCCATCTCCTCGAAGGAGCCTCTCTCCTCGTAGGAGTCCATCTCCCAGGGATGAAAGTCCTGAAAGAAATGGTAATGGTGGTGGAAGGTCTCCAACTTCTAGGAGTGTTTCACCAAGAGGGCGACCTGCCGACTCACGAAGCCCATCCCCACAAAATTCAGATGATAAGTGAATACGGATGGGAGGAGAACTATGGACATAACCGAACAGGCAGGAATGAATGCTTTGAGGACTTGTTGATTAAAAATGTTATCAGACTATAAATTCTAGTTTTGGTAGGACTTTCCTATGGTGTTCAATTCTCATATATTGAGCTTCATGTTCCTATCTACTATCTTGTATCAGTTTGATACTTTTTACCTCTGCAGTCTGTATCCTTATTTCCAGTCATAGGTTATAGCTTCGGGACATGTTCTTCCTTTATATTTCTGCTTCTCTACTCTGTAGTACCAGTACTATGTTTTGAGCAATTGTGGTGTCTTTTTCTTTTTCCTTGTATTTTTTTAAATTTATTTGAGCCATTCTTATTCATCATGAATCCTCTATTGGATTTTATAGTTATGTTCGGGGTAAGAGTGACTGGCGCCTGATTGGCGGATGTTGATTTTGTGGCTGTTGATGCTGTTTCTATGTGATAGATGGGTGTTCGTGACTTTGATGCTGGTTGCAGCAGTTTGCTGACTTTATCAGTATGATTTGTCTATGAAGTATGATGTTGCTGTGGGAAGTTTCTTAACTAATATTCACTGGATAAAATTGTTGGTAAGGTTTTTGGTCACGTTTAAATGTTTTTTAAAAACTTAATAATGCTTTAGGATTTGATGTTTGACCTGATTATCCATTCTGGTCTATCCAAGTTTTGAAAGCACTTTCACCCGCAAGGAGATCTAGAGGCCTTGATATATAGGTTTGACCCACCTATGTTGATCGATTTTTTTTAACGCATAGCTGATGATGCATTTGAGAGGTGTATTGATTGATTTTAATGGTGAAAGTTGGTTGAAGATAATTTAGCTACAGGTTTGAACTTTTAGCCATCGTAACAAAAGTTTTTAGTTTTCTATGTTATTTGAAGGGGGTGGCTTCAAACTCACAGGTTTACTATCCCAAACATTTAGATCAATCTCTTGCTGCTTGATGTGGTGACTGACTGTATTGTAGCTTTCGGATTACACAATTGGTGCTGTGGTGTTTGATAGCAGATACGTTTGTTGATGTACGATAGACATGAGTTCGATTGGCTGTTGCTGCCCTTGTGGGGGGTGAGACTGGCAATGATGCTTCAGTTGCTCGGCAATGGCTGTATCAATGCTTGCTTTCCTTTAAATATAAGGGTCTGCATGTATAGTGGCTTAACATCTCCTGTAAGAAAATTTATTTATGAAGAATTATAATATCGATTTGCAAAATTCGGTT

Coding sequence (CDS)

ATGTCTCACTTTGGAAGGTCTGGTCCTCCAGATATTACAGATACCTATTCGCTTCTCGTGCTCAACATCACCTTCCGTACCACTGCGGATGACCTCTACCCGCTTTTCCATAAGTATGGGAAGGTTGTTGATATCTTCATCCCCAGAGATCGAAGGACTGGTGATTCCAGAGGCTTTGCATTTGTGCGTTACAAATATGCAGATGAAGCCCAGAAAGCAGTGGAGAGGCTAGATGGCACTATGGTTGATGGACGAGAGATAACTGTTCAGTTTGCAAAATATGGTCCAAATGCAGAAAGGATTCACAAAGGGAAGATCAGCGAAGCATTTCCCAAGTCAAGATACAGGTCTAGAAGTCGAAGTCCAAGGAGACGATATCGGGATGATTACAGAGACAGGGATTATAGGAGGAGAAGTAGAAGCAGAAGCAGAAGCCGAAGCTTGGACAGGAGTGATCGTGATAGGCGTGGTAGAGAAAGGGAGAGGGAAAGAGACCATCGCAGACGAAGCCGGAGCATTAGTCCTAGGCGACCTAGTCCTGATTACTCCAAGGGAAGGGGAAGAGGACGCTATGATGATGAGCGAAGAAGTCGTAGTGTCAGCCGTAGCCGAAGTCGTGGCCGTAGTCGTTCTGTGGACAGTGGTTCTCCTGGTAGACGAAGCCCTAGTCCAAGAAGGAGTCCATCTCCTCGAAGGAGCCTCTCTCCTCGTAGGAGTCCATCTCCCAGGGATGAAAGTCCTGAAAGAAATGGTAATGGTGGTGGAAGGTCTCCAACTTCTAGGAGTGTTTCACCAAGAGGGCGACCTGCCGACTCACGAAGCCCATCCCCACAAAATTCAGATGATAAGTGA

Protein sequence

MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSRSPRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSPDYSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSPSPRDESPERNGNGGGRSPTSRSVSPRGRPADSRSPSPQNSDDK*
Homology
[Close]
BLAST of MELO3C018644 vs. Swiss-Prot
Match: SC35_ARATH (Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana GN=SC35 PE=1 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 6.1e-85
Identity = 194/316 (61.39%), Postives = 210/316 (66.46%), Query Frame = 1 

Query: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDI+DTYSLLVLNITFRTTADDLYPLF KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60

Query: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRS--- 120
           FVRYKY DEA KAVERLDG +VDGREITVQFAKYGPNAE+I KG++ E  PKSR      
Sbjct: 61  FVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSRRSRSRS 120

Query: 121 --------------------RSRSPRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRG 180
                               RSRSPRRR RDDYR++DYR+RSRSRS          DRR 
Sbjct: 121 PRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRS---------YDRRE 180

Query: 181 RERERERDHRRRSRSISPRRPSPDYSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSP 240
           R  E++RDHRRR+RS   R  SPD  K R RGRYD+E RS S S S S  R RS  S SP
Sbjct: 181 RHEEKDRDHRRRTRS---RSASPD-EKRRVRGRYDNESRSHSRSLSASPAR-RSPRSSSP 240

Query: 241 GRRSP---------SPRRSPSPRRSLSPR------RSPSPRDESPERNGNGGGRSPTSRS 278
            + SP         S  RSPSPRRSLSPR       SPS ++ SPER  N   RSP+  S
Sbjct: 241 QKTSPAREVSPDKRSNERSPSPRRSLSPRSPALQKASPS-KEMSPERRSN--ERSPSPGS 299

[Close]
BLAST of MELO3C018644 vs. Swiss-Prot
Match: SRSF2_CHICK (Serine/arginine-rich splicing factor 2 OS=Gallus gallus GN=SRSF2 PE=2 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 8.6e-39
Identity = 108/239 (45.19%), Postives = 135/239 (56.49%), Query Frame = 1 

Query: 4   FGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVR 63
           +GR  PPD+    SL V N+T+RT+ D L  +F KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3   YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 62

Query: 64  YKYADEAQKAVERLDGTMVDGREITVQFAKYG--PNAERIHKGKISEAFPKSRYRSRSRS 123
           +    +A+ A++ +DG ++DGRE+ VQ A+YG  P++    +G     +  S Y  RSRS
Sbjct: 63  FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRRYGSSGYGRRSRS 122

Query: 124 PRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSPD 183
           PRR           RRRSRSRSRSRS  RS R R  R + R R  R RSRS S       
Sbjct: 123 PRR-----------RRRSRSRSRSRSRSRS-RSRYSRSKSRSRT-RSRSRSTS------- 182

Query: 184 YSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 241
               + R     + +S SVSRSRSR RSRS     P     S R S S  RS SP +SP
Sbjct: 183 ----KSRSARRSKSKSSSVSRSRSRSRSRSRSRSPP---PTSKRESNSRSRSKSPPKSP 213


HSP 2 Score: 55.1 bits (131), Expect = 1.5e-06
Identity = 60/171 (35.09%), Postives = 73/171 (42.69%), Query Frame = 1 

Query: 122 PRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDR---DRRGRERERERDHRRRSRSISPRRP 181
           PR RY  + R   + R    R    ++D  D    D R    +  R  R      S R P
Sbjct: 46  PRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGP 105

Query: 182 SPDY--SKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGR-RSPSPRRSPSPRRSLS 241
            P    S G GR      RR RS SRSRSR RSRS    S  + RS +  RS S  +S S
Sbjct: 106 PPRRYGSSGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRS 165

Query: 242 PRRSPSPRDESPERNGNGGGRSPTSRSVSP---RGRPADSRSPSPQNSDDK 284
            RRS S +  S  R+ +       SRS  P   R   + SRS SP  S ++
Sbjct: 166 ARRSKS-KSSSVSRSRSRSRSRSRSRSPPPTSKRESNSRSRSKSPPKSPEE 215

[Close]
BLAST of MELO3C018644 vs. Swiss-Prot
Match: SRSF2_PIG (Serine/arginine-rich splicing factor 2 OS=Sus scrofa GN=SRSF2 PE=2 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 3.3e-38
Identity = 107/239 (44.77%), Postives = 134/239 (56.07%), Query Frame = 1 

Query: 4   FGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVR 63
           +GR  PPD+    SL V N+T+RT+ D L  +F KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3   YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 62

Query: 64  YKYADEAQKAVERLDGTMVDGREITVQFAKYG--PNAERIHKGKISEAFPKSRYRSRSRS 123
           +    +A+ A++ +DG ++DGRE+ VQ A+YG  P++    +G     +    Y  RSRS
Sbjct: 63  FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRRYGGGGYGRRSRS 122

Query: 124 PRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSPD 183
           PRR           RRRSRSRSRSRS  RS R R  R + R R  R RSRS S       
Sbjct: 123 PRR-----------RRRSRSRSRSRSRSRS-RSRYSRSKSRSRT-RSRSRSTS------- 182

Query: 184 YSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 241
               + R     + +S SVSRSRSR RSRS     P     S R S S  RS SP +SP
Sbjct: 183 ----KSRSARRSKSKSSSVSRSRSRSRSRSRSRSPP---PASKRESKSRSRSKSPPKSP 213


HSP 2 Score: 56.6 bits (135), Expect = 5.1e-07
Identity = 58/170 (34.12%), Postives = 69/170 (40.59%), Query Frame = 1 

Query: 122 PRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDR---DRRGRERERERDHRRRSRSISPRRP 181
           PR RY  + R   + R    R    ++D  D    D R    +  R  R      S R P
Sbjct: 46  PRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGP 105

Query: 182 SPDYSKGRGRGRYD----DERRSRSVSRSRSRGRSRSVDSGSPGR-RSPSPRRSPSPRRS 241
            P    G G GR        RRSRS SRSRSR RSRS  S S  R R+ S  RS S  RS
Sbjct: 106 PPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRS 165

Query: 242 LSPRRSPSPRDESPERNGNGGGRSPTSRSVSPRGRPADSRSPSPQNSDDK 284
               +S S              RS +    S R   + SRS SP  S ++
Sbjct: 166 ARRSKSKSSSVSRSRSRSRSRSRSRSPPPASKRESKSRSRSKSPPKSPEE 215

[Close]
BLAST of MELO3C018644 vs. Swiss-Prot
Match: SRSF2_BOVIN (Serine/arginine-rich splicing factor 2 OS=Bos taurus GN=SRSF2 PE=2 SV=3)

HSP 1 Score: 159.8 bits (403), Expect = 4.3e-38
Identity = 107/239 (44.77%), Postives = 134/239 (56.07%), Query Frame = 1 

Query: 4   FGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVR 63
           +GR  PPD+    SL V N+T+RT+ D L  +F KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3   YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 62

Query: 64  YKYADEAQKAVERLDGTMVDGREITVQFAKYG--PNAERIHKGKISEAFPKSRYRSRSRS 123
           +    +A+ A++ +DG ++DGRE+ VQ A+YG  P++    +G     +    Y  RSRS
Sbjct: 63  FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRRYGGGGYGRRSRS 122

Query: 124 PRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSPD 183
           PRR           RRRSRSRSRSRS  RS R R  R + R R  R RSRS S       
Sbjct: 123 PRR-----------RRRSRSRSRSRSRSRS-RSRYSRSKSRSRT-RSRSRSTS------- 182

Query: 184 YSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 241
               + R     + +S SVSRSRSR RSRS     P     S R S S  RS SP +SP
Sbjct: 183 ----KSRSARRSKSKSSSVSRSRSRSRSRSRSRSPP---PVSKRESKSRSRSKSPPKSP 213


HSP 2 Score: 58.2 bits (139), Expect = 1.7e-07
Identity = 59/170 (34.71%), Postives = 70/170 (41.18%), Query Frame = 1 

Query: 122 PRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDR---DRRGRERERERDHRRRSRSISPRRP 181
           PR RY  + R   + R    R    ++D  D    D R    +  R  R      S R P
Sbjct: 46  PRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGP 105

Query: 182 SPDYSKGRGRGRYD----DERRSRSVSRSRSRGRSRSVDSGSPGR-RSPSPRRSPSPRRS 241
            P    G G GR        RRSRS SRSRSR RSRS  S S  R R+ S  RS S  RS
Sbjct: 106 PPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRS 165

Query: 242 LSPRRSPSPRDESPERNGNGGGRSPTSRSVSPRGRPADSRSPSPQNSDDK 284
               +S S              RS +   VS R   + SRS SP  S ++
Sbjct: 166 ARRSKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKSRSRSKSPPKSPEE 215

[Close]
BLAST of MELO3C018644 vs. Swiss-Prot
Match: SRSF2_HUMAN (Serine/arginine-rich splicing factor 2 OS=Homo sapiens GN=SRSF2 PE=1 SV=4)

HSP 1 Score: 159.8 bits (403), Expect = 4.3e-38
Identity = 107/239 (44.77%), Postives = 134/239 (56.07%), Query Frame = 1 

Query: 4   FGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVR 63
           +GR  PPD+    SL V N+T+RT+ D L  +F KYG+V D++IPRDR T +SRGFAFVR
Sbjct: 3   YGRP-PPDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVR 62

Query: 64  YKYADEAQKAVERLDGTMVDGREITVQFAKYG--PNAERIHKGKISEAFPKSRYRSRSRS 123
           +    +A+ A++ +DG ++DGRE+ VQ A+YG  P++    +G     +    Y  RSRS
Sbjct: 63  FHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGPPPRRYGGGGYGRRSRS 122

Query: 124 PRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSPD 183
           PRR           RRRSRSRSRSRS  RS R R  R + R R  R RSRS S       
Sbjct: 123 PRR-----------RRRSRSRSRSRSRSRS-RSRYSRSKSRSRT-RSRSRSTS------- 182

Query: 184 YSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 241
               + R     + +S SVSRSRSR RSRS     P     S R S S  RS SP +SP
Sbjct: 183 ----KSRSARRSKSKSSSVSRSRSRSRSRSRSRSPP---PVSKRESKSRSRSKSPPKSP 213


HSP 2 Score: 58.2 bits (139), Expect = 1.7e-07
Identity = 59/170 (34.71%), Postives = 70/170 (41.18%), Query Frame = 1 

Query: 122 PRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDR---DRRGRERERERDHRRRSRSISPRRP 181
           PR RY  + R   + R    R    ++D  D    D R    +  R  R      S R P
Sbjct: 46  PRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPDSHHSRRGP 105

Query: 182 SPDYSKGRGRGRYD----DERRSRSVSRSRSRGRSRSVDSGSPGR-RSPSPRRSPSPRRS 241
            P    G G GR        RRSRS SRSRSR RSRS  S S  R R+ S  RS S  RS
Sbjct: 106 PPRRYGGGGYGRRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRSTSKSRS 165

Query: 242 LSPRRSPSPRDESPERNGNGGGRSPTSRSVSPRGRPADSRSPSPQNSDDK 284
               +S S              RS +   VS R   + SRS SP  S ++
Sbjct: 166 ARRSKSKSSSVSRSRSRSRSRSRSRSPPPVSKRESKSRSRSKSPPKSPEE 215

[Close]
BLAST of MELO3C018644 vs. TrEMBL
Match: A0A0A0K7C0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G062820 PE=4 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 3.2e-157
Identity = 276/283 (97.53%), Postives = 282/283 (99.65%), Query Frame = 1 

Query: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60

Query: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR 120
           FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR
Sbjct: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR 120

Query: 121 SPRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSP 180
           SPRRR+RDDYRD+DYRRRSRSRSRSRSLD++DRDRRGRERERERDHRRRSRSISPRRPSP
Sbjct: 121 SPRRRHRDDYRDKDYRRRSRSRSRSRSLDKNDRDRRGRERERERDHRRRSRSISPRRPSP 180

Query: 181 DYSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 240
           DYSKGRGRGRYDDERRSRS+SRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP
Sbjct: 181 DYSKGRGRGRYDDERRSRSLSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 240

Query: 241 SPRDESPERNGNGGGRSPTSRSVSPRGRPADSRSPSPQNSDDK 284
           SPR+ESPERNGNG GRSPTSRSVSPRGRPADSRSPSPQNSDDK
Sbjct: 241 SPREESPERNGNGVGRSPTSRSVSPRGRPADSRSPSPQNSDDK 283

[Close]
BLAST of MELO3C018644 vs. TrEMBL
Match: A0A059BA96_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00770 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 1.0e-110
Identity = 222/281 (79.00%), Postives = 235/281 (83.63%), Query Frame = 1 

Query: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDITDTYSLLVLNITFRTTADDL+PLF KYGKVVDIFIPRDRRTG+SRGFA
Sbjct: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFA 60

Query: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR 120
           FVRYKYADEAQKAVE+LDG +VDGREITVQFAKYGPNAERIHKGKISE  P+SRYRSRSR
Sbjct: 61  FVRYKYADEAQKAVEKLDGRVVDGREITVQFAKYGPNAERIHKGKISENLPRSRYRSRSR 120

Query: 121 SPRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSP 180
           SPRRRYRDD RDRD   R R RSRSRS DR DRD   R R R++D RR+SRS   R  SP
Sbjct: 121 SPRRRYRDDNRDRD---RDRRRSRSRSRDRYDRD---RYRGRDKDDRRQSRS---RSASP 180

Query: 181 DYSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 240
           DY K RGRGRYDDERRSR  SRSRSR  SRS+DS SP RRSP PR S SPRRS SPRRS 
Sbjct: 181 DYYKSRGRGRYDDERRSR--SRSRSRSLSRSMDSASP-RRSPPPRHSASPRRSPSPRRSL 240

Query: 241 SPRDESPERNGNGGGRSPTSRSVSPRGRPADSRSPSPQNSD 282
           +PR ESP+      GRSP  RSVSPRGR +DSRSPSP+NSD
Sbjct: 241 TPRGESPDGRSR-DGRSPV-RSVSPRGRRSDSRSPSPRNSD 267

[Close]
BLAST of MELO3C018644 vs. TrEMBL
Match: A0A0B2S4K4_GLYSO (Serine/arginine-rich splicing factor 2 OS=Glycine soja GN=glysoja_028029 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 7.2e-109
Identity = 218/285 (76.49%), Postives = 235/285 (82.46%), Query Frame = 1 

Query: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDI+DTYSLLVLNITFRTTADDL+PLF KYGKVVDIFIP+DRRTG+SRGFA
Sbjct: 1   MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60

Query: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR 120
           FVRYKYADEAQKAVERLDG MVDGREITVQFAKYGPNAERIHKG+I E  P+SR RSRSR
Sbjct: 61  FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIETSPRSR-RSRSR 120

Query: 121 SPRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSP 180
           SPR+R+RDDY+DRDYRRRSRSRS        DR  R R R R++D+RRRSRS   R  S 
Sbjct: 121 SPRKRHRDDYKDRDYRRRSRSRS-------YDRYERDRHRGRDKDYRRRSRS---RSASL 180

Query: 181 DYSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 240
           DY KGRGRGRYDDER SRS        RSRSVDSGSP RRSPSPRRSPSP+RS SP+RSP
Sbjct: 181 DY-KGRGRGRYDDERNSRS--------RSRSVDSGSPARRSPSPRRSPSPQRSTSPQRSP 240

Query: 241 ----SPRDESPERNGNGGGRSPTSRSVSPRGRPADSRSPSPQNSD 282
               SPR ESP  N +  GRSPT RSVSPRGRP  SRSPSP+NS+
Sbjct: 241 SPRKSPRGESP-ANRSRDGRSPTPRSVSPRGRPDASRSPSPRNSN 264

[Close]
BLAST of MELO3C018644 vs. TrEMBL
Match: I1KR32_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_08G072600 PE=4 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 7.2e-109
Identity = 218/285 (76.49%), Postives = 235/285 (82.46%), Query Frame = 1 

Query: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDI+DTYSLLVLNITFRTTADDL+PLF KYGKVVDIFIP+DRRTG+SRGFA
Sbjct: 1   MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60

Query: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR 120
           FVRYKYADEAQKAVERLDG MVDGREITVQFAKYGPNAERIHKG+I E  P+SR RSRSR
Sbjct: 61  FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIETSPRSR-RSRSR 120

Query: 121 SPRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSP 180
           SPR+R+RDDY+DRDYRRRSRSRS        DR  R R R R++D+RRRSRS   R  S 
Sbjct: 121 SPRKRHRDDYKDRDYRRRSRSRS-------YDRYERDRHRGRDKDYRRRSRS---RSASL 180

Query: 181 DYSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 240
           DY KGRGRGRYDDER SRS        RSRSVDSGSP RRSPSPRRSPSP+RS SP+RSP
Sbjct: 181 DY-KGRGRGRYDDERNSRS--------RSRSVDSGSPARRSPSPRRSPSPQRSTSPQRSP 240

Query: 241 ----SPRDESPERNGNGGGRSPTSRSVSPRGRPADSRSPSPQNSD 282
               SPR ESP  N +  GRSPT RSVSPRGRP  SRSPSP+NS+
Sbjct: 241 SPRKSPRGESP-ANRSRDGRSPTPRSVSPRGRPDASRSPSPRNSN 264

[Close]
BLAST of MELO3C018644 vs. TrEMBL
Match: A0A151TEP4_CAJCA (Splicing factor, arginine/serine-rich 2 OS=Cajanus cajan GN=KK1_011780 PE=4 SV=1)

HSP 1 Score: 395.2 bits (1014), Expect = 6.7e-107
Identity = 213/285 (74.74%), Postives = 233/285 (81.75%), Query Frame = 1 

Query: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDI+DTYSLLVLNITFRTTADDL+PLF KYGKVVDIFIP+DRRTG+SRGFA
Sbjct: 1   MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60

Query: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR 120
           FVRYKYADEAQKAV+RLDG MVDGREITVQFAKYGPNAERIHKG+I E   +SR+RSRSR
Sbjct: 61  FVRYKYADEAQKAVDRLDGRMVDGREITVQFAKYGPNAERIHKGRIIETAERSRHRSRSR 120

Query: 121 SPRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSP 180
           SPR+RYRDDYRDRDY+RRSRSRS        DR  R R R R++D+RRRSRS   R  S 
Sbjct: 121 SPRKRYRDDYRDRDYKRRSRSRS-------YDRYERERHRGRDKDYRRRSRS---RSTSL 180

Query: 181 DYSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 240
           DY KGRGRGR+DDER SRS        RSRSVDS SP +RSPSPRRSPSP+RS SP+RS 
Sbjct: 181 DY-KGRGRGRFDDERHSRS--------RSRSVDSRSPAQRSPSPRRSPSPQRSTSPQRSI 240

Query: 241 SPR----DESPERNGNGGGRSPTSRSVSPRGRPADSRSPSPQNSD 282
           SPR     ESP  N + GG SPT RSVSPRGRP  SRSPSP+NS+
Sbjct: 241 SPRKSPQGESP-ANHSPGGHSPTPRSVSPRGRPDASRSPSPRNSN 265

[Close]
BLAST of MELO3C018644 vs. TAIR10
Match: AT5G64200.1 (AT5G64200.1 ortholog of human splicing factor SC35)

HSP 1 Score: 315.5 bits (807), Expect = 3.4e-86
Identity = 194/316 (61.39%), Postives = 210/316 (66.46%), Query Frame = 1 

Query: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDI+DTYSLLVLNITFRTTADDLYPLF KYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDISDTYSLLVLNITFRTTADDLYPLFAKYGKVVDVFIPRDRRTGDSRGFA 60

Query: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRS--- 120
           FVRYKY DEA KAVERLDG +VDGREITVQFAKYGPNAE+I KG++ E  PKSR      
Sbjct: 61  FVRYKYKDEAHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSRRSRSRS 120

Query: 121 --------------------RSRSPRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRG 180
                               RSRSPRRR RDDYR++DYR+RSRSRS          DRR 
Sbjct: 121 PRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRS---------YDRRE 180

Query: 181 RERERERDHRRRSRSISPRRPSPDYSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSP 240
           R  E++RDHRRR+RS   R  SPD  K R RGRYD+E RS S S S S  R RS  S SP
Sbjct: 181 RHEEKDRDHRRRTRS---RSASPD-EKRRVRGRYDNESRSHSRSLSASPAR-RSPRSSSP 240

Query: 241 GRRSP---------SPRRSPSPRRSLSPR------RSPSPRDESPERNGNGGGRSPTSRS 278
            + SP         S  RSPSPRRSLSPR       SPS ++ SPER  N   RSP+  S
Sbjct: 241 QKTSPAREVSPDKRSNERSPSPRRSLSPRSPALQKASPS-KEMSPERRSN--ERSPSPGS 299

[Close]
BLAST of MELO3C018644 vs. TAIR10
Match: AT1G55310.3 (AT1G55310.3 SC35-like splicing factor 33)

HSP 1 Score: 120.9 bits (302), Expect = 1.2e-27
Identity = 101/281 (35.94%), Postives = 127/281 (45.20%), Query Frame = 1 

Query: 17  SLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTG------------DSRGFAFVRY 76
           SLLV N+      +DL   F ++G V DI++PRD  TG            D RGF FV++
Sbjct: 37  SLLVRNLRHDCRQEDLRKSFEQFGPVKDIYLPRDYYTGSHLCTDTCKASRDPRGFGFVQF 96

Query: 77  KYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSRSPRR 136
               +A  A   +DG ++ GRE+TV FA+   N ++  + +  E    SR+R R R+P R
Sbjct: 97  MDPADAADAKHHMDGYLLLGRELTVVFAE--ENRKKPTEMRARERGGGSRFRDRRRTPPR 156

Query: 137 RYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDH------RRRSRSISPRRP 196
            Y                    S  RS   RRGR R R  D+      R   RSISPR  
Sbjct: 157 YY--------------------SRSRSPPPRRGRSRSRSGDYYSPPPRRHHPRSISPREE 216

Query: 197 SPDYSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPR--RSLSP 256
             D  +   R    D  R RS++  R + RS S        RSP   RSPSP+  RS+SP
Sbjct: 217 RYDGRRSYSRSPASDGSRGRSLTPVRGKSRSLSPSPRRSISRSPRRSRSPSPKRNRSVSP 276

Query: 257 RRSPSPRDESPERNGNGGGRSPTSRSVSPRGRPADSRSPSP 278
           RRS S    SP R+     RSP     S    PA SRS SP
Sbjct: 277 RRSIS---RSPRRS-----RSPRRSRRSYTPEPARSRSQSP 287

[Close]
BLAST of MELO3C018644 vs. TAIR10
Match: AT3G13570.1 (AT3G13570.1 SC35-like splicing factor 30A)

HSP 1 Score: 110.9 bits (276), Expect = 1.3e-24
Identity = 99/274 (36.13%), Postives = 134/274 (48.91%), Query Frame = 1 

Query: 4   FGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVR 63
           FG S   D+    SLLV N+      +DL   F ++G V DI++PRD  TGD RGF F++
Sbjct: 27  FGGSRDSDLPT--SLLVRNLRHDCRQEDLRRPFEQFGPVKDIYLPRDYYTGDPRGFGFIQ 86

Query: 64  YKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKS-RYRSRSRSP 123
           +    +A +A  ++DG ++ GRE+TV FA+   N ++  + +  +   +S R++ R RSP
Sbjct: 87  FMDPADAAEAKHQMDGYLLLGRELTVVFAE--ENRKKPTEMRTRDRGGRSNRFQDRRRSP 146

Query: 124 RRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSPDY 183
            R  R        RR  RSRSRSR  +     R             +SRS+SP+      
Sbjct: 147 PRYSRSP----PPRRGRRSRSRSRGYNSPPAKRH------------QSRSVSPQDR---- 206

Query: 184 SKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSPSP 243
                  RY+ ER   S SRS     SR V SGSPGR     R   SPRRS+SPR++ S 
Sbjct: 207 -------RYEKER---SYSRSPPHNGSR-VRSGSPGRVKSHSR---SPRRSVSPRKNRSY 261

Query: 244 RDESPERNGNGGGRSPTSRSVSPRGRPADSRSPS 277
             E   R+ +   R   S +  PRG     RSPS
Sbjct: 267 TPEQ-ARSQSPVPRQSRSPTPVPRGAQNGDRSPS 261

[Close]
BLAST of MELO3C018644 vs. TAIR10
Match: AT1G07350.1 (AT1G07350.1 RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 107.1 bits (266), Expect = 1.9e-23
Identity = 102/283 (36.04%), Postives = 122/283 (43.11%), Query Frame = 1 

Query: 17  SLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVER 76
           SL V  ++ R T  DL   F K GKV D+ +  D  T +SRGF F+  K   +A + +  
Sbjct: 76  SLYVTGLSHRVTERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRS 135

Query: 77  LDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSRSPRRRYRDDYRDRDYR 136
           LD +++ GR ITV+ A+            +     + R++S S SPRR            
Sbjct: 136 LDHSVLQGRVITVEKARRRRGRTPTPGKYLGLRTARGRHKSPSYSPRRSV---------- 195

Query: 137 RRSRSRSRSRSLDRS-----DRDRRGRERERERDHRRRSRSISPRRPSPDYSKGRGRGR- 196
             SRSRSRS S DR         RRGR       +RRR      R PSPD    R R R 
Sbjct: 196 SCSRSRSRSYSSDRGRSYSPSYGRRGRSSSYSPFYRRRRFYSPSRSPSPDDRYNRRRDRS 255

Query: 197 YDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPR-----RSLSPRRSPSPRDE 256
           Y    R R  SRS SR       S    RR  S  RS SPR     RS SP      R  
Sbjct: 256 YSPYYRRRDRSRSYSRNCRARDRSPYYMRRYRSRSRSYSPRYRARDRSCSPYYRGRDRSY 315

Query: 257 SPERNGNGGGRSPTSR----------SVSPRGRPADSRSPSPQ 279
           SP   G     SP SR          SVSP GR + SRS SP+
Sbjct: 316 SPHYQGRDRSYSPESRYYRRHRSVSGSVSPGGR-SMSRSISPR 347


HSP 2 Score: 33.9 bits (76), Expect = 2.0e-01
Identity = 28/70 (40.00%), Postives = 36/70 (51.43%), Query Frame = 1 

Query: 157 GRERERERDHRRRSRSISPRRPSPDYSKGRGRGRYD------DERRSRSVSRSRSRGRSR 216
           GR+ +R  ++  R  + SP      YS+   R RY       D+RR RSVSRS SR  +R
Sbjct: 12  GRQVQRVLEYPLRLENRSPM----SYSR---RSRYSPSLSPYDKRRGRSVSRSLSRSPTR 71

Query: 217 SV--DSGSPG 219
           SV  D+ +PG
Sbjct: 72  SVSSDAENPG 74


HSP 3 Score: 32.7 bits (73), Expect = 4.4e-01
Identity = 37/113 (32.74%), Postives = 43/113 (38.05%), Query Frame = 1 

Query: 96  PNAERIHKGKISEAFPKSRYRSRSRSPRRRYRD-----DYRDRD--------YRRRSRSR 155
           P   R ++ +     P+ R R RS SP  R RD      Y+ RD        Y RR RS 
Sbjct: 270 PYYMRRYRSRSRSYSPRYRARDRSCSPYYRGRDRSYSPHYQGRDRSYSPESRYYRRHRSV 329

Query: 156 S-------RSRSLDRSDRDRRGRERERERDHRRRS--------RSISPRRPSP 181
           S       RS S   S R  R   R + R H R+S        RS + R  SP
Sbjct: 330 SGSVSPGGRSMSRSISPRKGRKESRSKSRRHDRQSSMCHSRSARSSTSRSVSP 382

[Close]
BLAST of MELO3C018644 vs. TAIR10
Match: AT5G18810.1 (AT5G18810.1 SC35-like splicing factor 28)

HSP 1 Score: 100.5 bits (249), Expect = 1.7e-21
Identity = 76/203 (37.44%), Postives = 106/203 (52.22%), Query Frame = 1 

Query: 18  LLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFAFVRYKYADEAQKAVERL 77
           LL+ N+      +DL   F ++G + DI++PR+  TG+ RGF FV+Y+YA++A +A++R+
Sbjct: 49  LLIRNLPLDARPNDLRDSFERFGPLKDIYLPRNYYTGEPRGFGFVKYRYAEDAAEAMKRM 108

Query: 78  DGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRY-RSRSRSPRRRYRDDYRDRDYR 137
           +  ++ GREI + FA+      +  +     +     Y R+  RSPRRRY          
Sbjct: 109 NHKVIGGREIAIVFAEENRKTPQEMRTTNGTSGRHGDYKRTSHRSPRRRY---------- 168

Query: 138 RRSRSRSRSRSLDRSDRDRRGRERERE-RDHRRRSRSISPRRPSPDYS---KGRGRGRYD 197
              RS SRSRS  R +  R  + RE +    RRRSRSIS R P P      K R      
Sbjct: 169 ---RSHSRSRSPPRRE-SRHSKVREDDLYSPRRRSRSIS-RSPLPRNEREYKSRNCRSPR 228

Query: 198 DER-----RSRSVSRSRSRGRSR 211
           +ER     RSR +SRSRSR  SR
Sbjct: 229 EERVLTPIRSRCLSRSRSRSLSR 236


HSP 2 Score: 43.5 bits (101), Expect = 2.5e-04
Identity = 36/112 (32.14%), Postives = 48/112 (42.86%), Query Frame = 1 

Query: 130 YRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSPDYSKGRGRG 189
           + + + +     R+ + +  R    +R   R   R +R  SRS SP R    +SK R   
Sbjct: 122 FAEENRKTPQEMRTTNGTSGRHGDYKRTSHRSPRRRYRSHSRSRSPPRRESRHSKVREDD 181

Query: 190 RYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSPS 242
            Y   RRSRS+SRS      R   S +   RSP   R  +P RS    RS S
Sbjct: 182 LYSPRRRSRSISRSPLPRNEREYKSRN--CRSPREERVLTPIRSRCLSRSRS 231

[Close]
BLAST of MELO3C018644 vs. NCBI nr
Match: gi|659110407|ref|XP_008455209.1| (PREDICTED: serine/arginine-rich splicing factor 2 isoform X1 [Cucumis melo])

HSP 1 Score: 573.9 bits (1478), Expect = 1.5e-160
Identity = 283/283 (100.00%), Postives = 283/283 (100.00%), Query Frame = 1 

Query: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60

Query: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR 120
           FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR
Sbjct: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR 120

Query: 121 SPRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSP 180
           SPRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSP
Sbjct: 121 SPRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSP 180

Query: 181 DYSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 240
           DYSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP
Sbjct: 181 DYSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 240

Query: 241 SPRDESPERNGNGGGRSPTSRSVSPRGRPADSRSPSPQNSDDK 284
           SPRDESPERNGNGGGRSPTSRSVSPRGRPADSRSPSPQNSDDK
Sbjct: 241 SPRDESPERNGNGGGRSPTSRSVSPRGRPADSRSPSPQNSDDK 283

[Close]
BLAST of MELO3C018644 vs. NCBI nr
Match: gi|659110410|ref|XP_008455210.1| (PREDICTED: serine/arginine-rich splicing factor 2 isoform X2 [Cucumis melo])

HSP 1 Score: 572.0 bits (1473), Expect = 5.8e-160
Identity = 282/282 (100.00%), Postives = 282/282 (100.00%), Query Frame = 1 

Query: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60

Query: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR 120
           FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR
Sbjct: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR 120

Query: 121 SPRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSP 180
           SPRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSP
Sbjct: 121 SPRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSP 180

Query: 181 DYSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 240
           DYSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP
Sbjct: 181 DYSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 240

Query: 241 SPRDESPERNGNGGGRSPTSRSVSPRGRPADSRSPSPQNSDD 283
           SPRDESPERNGNGGGRSPTSRSVSPRGRPADSRSPSPQNSDD
Sbjct: 241 SPRDESPERNGNGGGRSPTSRSVSPRGRPADSRSPSPQNSDD 282

[Close]
BLAST of MELO3C018644 vs. NCBI nr
Match: gi|778724346|ref|XP_004136874.2| (PREDICTED: serine/arginine-rich splicing factor SC35 [Cucumis sativus])

HSP 1 Score: 562.4 bits (1448), Expect = 4.6e-157
Identity = 276/283 (97.53%), Postives = 282/283 (99.65%), Query Frame = 1 

Query: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA
Sbjct: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60

Query: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR 120
           FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR
Sbjct: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR 120

Query: 121 SPRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSP 180
           SPRRR+RDDYRD+DYRRRSRSRSRSRSLD++DRDRRGRERERERDHRRRSRSISPRRPSP
Sbjct: 121 SPRRRHRDDYRDKDYRRRSRSRSRSRSLDKNDRDRRGRERERERDHRRRSRSISPRRPSP 180

Query: 181 DYSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 240
           DYSKGRGRGRYDDERRSRS+SRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP
Sbjct: 181 DYSKGRGRGRYDDERRSRSLSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 240

Query: 241 SPRDESPERNGNGGGRSPTSRSVSPRGRPADSRSPSPQNSDDK 284
           SPR+ESPERNGNG GRSPTSRSVSPRGRPADSRSPSPQNSDDK
Sbjct: 241 SPREESPERNGNGVGRSPTSRSVSPRGRPADSRSPSPQNSDDK 283

[Close]
BLAST of MELO3C018644 vs. NCBI nr
Match: gi|702390162|ref|XP_010065585.1| (PREDICTED: serine/arginine-rich splicing factor SC35-like isoform X2 [Eucalyptus grandis])

HSP 1 Score: 407.9 bits (1047), Expect = 1.4e-110
Identity = 222/281 (79.00%), Postives = 235/281 (83.63%), Query Frame = 1 

Query: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDITDTYSLLVLNITFRTTADDL+PLF KYGKVVDIFIPRDRRTG+SRGFA
Sbjct: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFA 60

Query: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR 120
           FVRYKYADEAQKAVE+LDG +VDGREITVQFAKYGPNAERIHKGKISE  P+SRYRSRSR
Sbjct: 61  FVRYKYADEAQKAVEKLDGRVVDGREITVQFAKYGPNAERIHKGKISENLPRSRYRSRSR 120

Query: 121 SPRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSP 180
           SPRRRYRDD RDRD   R R RSRSRS DR DRD   R R R++D RR+SRS   R  SP
Sbjct: 121 SPRRRYRDDNRDRD---RDRRRSRSRSRDRYDRD---RYRGRDKDDRRQSRS---RSASP 180

Query: 181 DYSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 240
           DY K RGRGRYDDERRSR  SRSRSR  SRS+DS SP RRSP PR S SPRRS SPRRS 
Sbjct: 181 DYYKSRGRGRYDDERRSR--SRSRSRSLSRSMDSASP-RRSPPPRHSASPRRSPSPRRSL 240

Query: 241 SPRDESPERNGNGGGRSPTSRSVSPRGRPADSRSPSPQNSD 282
           +PR ESP+      GRSP  RSVSPRGR +DSRSPSP+NSD
Sbjct: 241 TPRGESPDGRSR-DGRSPV-RSVSPRGRRSDSRSPSPRNSD 267

[Close]
BLAST of MELO3C018644 vs. NCBI nr
Match: gi|356524836|ref|XP_003531034.1| (PREDICTED: serine/arginine-rich splicing factor SC35 [Glycine max])

HSP 1 Score: 401.7 bits (1031), Expect = 1.0e-108
Identity = 218/285 (76.49%), Postives = 235/285 (82.46%), Query Frame = 1 

Query: 1   MSHFGRSGPPDITDTYSLLVLNITFRTTADDLYPLFHKYGKVVDIFIPRDRRTGDSRGFA 60
           MSHFGRSGPPDI+DTYSLLVLNITFRTTADDL+PLF KYGKVVDIFIP+DRRTG+SRGFA
Sbjct: 1   MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60

Query: 61  FVRYKYADEAQKAVERLDGTMVDGREITVQFAKYGPNAERIHKGKISEAFPKSRYRSRSR 120
           FVRYKYADEAQKAVERLDG MVDGREITVQFAKYGPNAERIHKG+I E  P+SR RSRSR
Sbjct: 61  FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIETSPRSR-RSRSR 120

Query: 121 SPRRRYRDDYRDRDYRRRSRSRSRSRSLDRSDRDRRGRERERERDHRRRSRSISPRRPSP 180
           SPR+R+RDDY+DRDYRRRSRSRS        DR  R R R R++D+RRRSRS   R  S 
Sbjct: 121 SPRKRHRDDYKDRDYRRRSRSRS-------YDRYERDRHRGRDKDYRRRSRS---RSASL 180

Query: 181 DYSKGRGRGRYDDERRSRSVSRSRSRGRSRSVDSGSPGRRSPSPRRSPSPRRSLSPRRSP 240
           DY KGRGRGRYDDER SRS        RSRSVDSGSP RRSPSPRRSPSP+RS SP+RSP
Sbjct: 181 DY-KGRGRGRYDDERNSRS--------RSRSVDSGSPARRSPSPRRSPSPQRSTSPQRSP 240

Query: 241 ----SPRDESPERNGNGGGRSPTSRSVSPRGRPADSRSPSPQNSD 282
               SPR ESP  N +  GRSPT RSVSPRGRP  SRSPSP+NS+
Sbjct: 241 SPRKSPRGESP-ANRSRDGRSPTPRSVSPRGRPDASRSPSPRNSN 264

The following BLAST results are available for this feature:
BLAST of MELO3C018644 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SC35_ARATH6.1e-8561.39Serine/arginine-rich splicing factor SC35 OS=Arabidopsis thaliana GN=SC35 PE=1 S... [more]
SRSF2_CHICK8.6e-3945.19Serine/arginine-rich splicing factor 2 OS=Gallus gallus GN=SRSF2 PE=2 SV=1[more]
SRSF2_PIG3.3e-3844.77Serine/arginine-rich splicing factor 2 OS=Sus scrofa GN=SRSF2 PE=2 SV=1[more]
SRSF2_BOVIN4.3e-3844.77Serine/arginine-rich splicing factor 2 OS=Bos taurus GN=SRSF2 PE=2 SV=3[more]
SRSF2_HUMAN4.3e-3844.77Serine/arginine-rich splicing factor 2 OS=Homo sapiens GN=SRSF2 PE=1 SV=4[more]
BLAST of MELO3C018644 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7C0_CUCSA3.2e-15797.53Uncharacterized protein OS=Cucumis sativus GN=Csa_7G062820 PE=4 SV=1[more]
A0A059BA96_EUCGR1.0e-11079.00Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00770 PE=4 SV=1[more]
A0A0B2S4K4_GLYSO7.2e-10976.49Serine/arginine-rich splicing factor 2 OS=Glycine soja GN=glysoja_028029 PE=4 SV... [more]
I1KR32_SOYBN7.2e-10976.49Uncharacterized protein OS=Glycine max GN=GLYMA_08G072600 PE=4 SV=1[more]
A0A151TEP4_CAJCA6.7e-10774.74Splicing factor, arginine/serine-rich 2 OS=Cajanus cajan GN=KK1_011780 PE=4 SV=1[more]
BLAST of MELO3C018644 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G64200.13.4e-8661.39 ortholog of human splicing factor SC35[more]
AT1G55310.31.2e-2735.94 SC35-like splicing factor 33[more]
AT3G13570.11.3e-2436.13 SC35-like splicing factor 30A[more]
AT1G07350.11.9e-2336.04 RNA-binding (RRM/RBD/RNP motifs) family protein[more]
AT5G18810.11.7e-2137.44 SC35-like splicing factor 28[more]
BLAST of MELO3C018644 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110407|ref|XP_008455209.1|1.5e-160100.00PREDICTED: serine/arginine-rich splicing factor 2 isoform X1 [Cucumis melo][more]
gi|659110410|ref|XP_008455210.1|5.8e-160100.00PREDICTED: serine/arginine-rich splicing factor 2 isoform X2 [Cucumis melo][more]
gi|778724346|ref|XP_004136874.2|4.6e-15797.53PREDICTED: serine/arginine-rich splicing factor SC35 [Cucumis sativus][more]
gi|702390162|ref|XP_010065585.1|1.4e-11079.00PREDICTED: serine/arginine-rich splicing factor SC35-like isoform X2 [Eucalyptus... [more]
gi|356524836|ref|XP_003531034.1|1.0e-10876.49PREDICTED: serine/arginine-rich splicing factor SC35 [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR003954RRM_dom_euk
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR003954RRM_dom_euk
IPR012677Nucleotide-bd_a/b_plait_sf
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0035196 production of miRNAs involved in gene silencing by miRNA
biological_process GO:0030422 production of siRNA involved in RNA interference
biological_process GO:0008150 biological_process
cellular_component GO:0005829 cytosol
cellular_component GO:0016020 membrane
cellular_component GO:0016607 nuclear speck
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0003723 RNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU49787melon EST collection version 4.0transcribed_cluster
MU52588melon EST collection version 4.0transcribed_cluster
MU62174melon EST collection version 4.0transcribed_cluster
MU64189melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018644T1MELO3C018644T1mRNA
MELO3C018644T2MELO3C018644T2mRNA
MELO3C018644T3MELO3C018644T3mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU49787MU49787transcribed_cluster
MU62174MU62174transcribed_cluster
MU64189MU64189transcribed_cluster
MU52588MU52588transcribed_cluster