MELO3C018597 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C018597
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionProtein kinase family protein with domain of unknown function (DUF26)
Locationchr1 : 1373717 .. 1374508 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACCACATTACCATTATTATTCTAAACAATGGCTCGTTTTACTCTTCTCGTTGCTTTTCTTGCCACATTGCTTCTTTCAAGCTTGAGTTCTTCTTCCTCTTTCTCCTCCTCCTCCACTATCGTATCTCGTAAGCTCTTGGCTTCGGATTTTCCGGAGCTCCCGGATTTCAATGTGCCACCATTTTACCCTGAATTCAGATTGCCTCCTCCACTTACATTTTTTGGTCCGAATACTCCTTCTTCCATCTTTCCCAACTTCCCATTTTTCTCTCCACCATCTAATCCTTCTCCTTGACCAGAAACTGAGCTTAATTCTCTGATAAACACTCTCTCTTCTCTCCCTAGCTCTCTTTCTATGTGGGTTATTTGGTGGTATTGTTATGGATGAAAAATAATGGGACTTCTGTTTAGTTTTCTTTTTTTTTTCTCTAAGTTTTCAATGGAAGCTCAAGAGGAAGAGCTGACTCTTAATATGTAATCCTCAAAAACAGGGTGTGAAAGTGCACATTTGATTCCATGCATTTGTGTCTGTGTCACTTTTTCCTGTTTATTTGTGTGGAAATAATGATATGTTATCATATTATTATGGAATAAGAATTTAATATATAGTTGTGTGCAAACCTATCCCTTTACACTTGATCTCTCTCTCTCCCCCTTCTGTGATTGATTATTATTATTATGTCTTTTGGTATTCTTGTGGATTTGTGATTAACTATGTCCCTAAACTTCTTTAGGAATTGTATCCAATTAACTCTCCATTAATAGTTGTATAAATTTAAACCCGAATATTT

mRNA sequence

AAACCACATTACCATTATTATTCTAAACAATGGCTCGTTTTACTCTTCTCGTTGCTTTTCTTGCCACATTGCTTCTTTCAAGCTTGAGTTCTTCTTCCTCTTTCTCCTCCTCCTCCACTATCGTATCTCGTAAGCTCTTGGCTTCGGATTTTCCGGAGCTCCCGGATTTCAATGTGCCACCATTTTACCCTGAATTCAGATTGCCTCCTCCACTTACATTTTTTGGTCCGAATACTCCTTCTTCCATCTTTCCCAACTTCCCATTTTTCTCTCCACCATCTAATCCTTCTCCTTGACCAGAAACTGAGCTTAATTCTCTGATAAACACTCTCTCTTCTCTCCCTAGCTCTCTTTCTATGTGGGTTATTTGGTGGTATTGTTATGGATGAAAAATAATGGGACTTCTGTTTAGTTTTCTTTTTTTTTTCTCTAAGTTTTCAATGGAAGCTCAAGAGGAAGAGCTGACTCTTAATATGTAATCCTCAAAAACAGGGTGTGAAAGTGCACATTTGATTCCATGCATTTGTGTCTGTGTCACTTTTTCCTGTTTATTTGTGTGGAAATAATGATATGTTATCATATTATTATGGAATAAGAATTTAATATATAGTTGTGTGCAAACCTATCCCTTTACACTTGATCTCTCTCTCTCCCCCTTCTGTGATTGATTATTATTATTATGTCTTTTGGTATTCTTGTGGATTTGTGATTAACTATGTCCCTAAACTTCTTTAGGAATTGTATCCAATTAACTCTCCATTAATAGTTGTATAAATTTAAACCCGAATATTT

Coding sequence (CDS)

ATGGCTCGTTTTACTCTTCTCGTTGCTTTTCTTGCCACATTGCTTCTTTCAAGCTTGAGTTCTTCTTCCTCTTTCTCCTCCTCCTCCACTATCGTATCTCGTAAGCTCTTGGCTTCGGATTTTCCGGAGCTCCCGGATTTCAATGTGCCACCATTTTACCCTGAATTCAGATTGCCTCCTCCACTTACATTTTTTGGTCCGAATACTCCTTCTTCCATCTTTCCCAACTTCCCATTTTTCTCTCCACCATCTAATCCTTCTCCTTGA

Protein sequence

MARFTLLVAFLATLLLSSLSSSSSFSSSSTIVSRKLLASDFPELPDFNVPPFYPEFRLPPPLTFFGPNTPSSIFPNFPFFSPPSNPSP*
Homology
[Close]
BLAST of MELO3C018597 vs. TrEMBL
Match: A0A0A0K7G8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066190 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 6.7e-37
Identity = 79/88 (89.77%), Postives = 84/88 (95.45%), Query Frame = 1 

Query: 1  MARFTLLVAFLATLLLSSLSSSSSFSSSSTIVSRKLLASDFPELPDFNVPPFYPEFRLPP 60
          MARFTLL+AF+ATLLLSSLSSSSS SSSS IVSRKLLASDFP LPDFNVPPFYPEF+LPP
Sbjct: 1  MARFTLLIAFVATLLLSSLSSSSS-SSSSIIVSRKLLASDFPGLPDFNVPPFYPEFKLPP 60

Query: 61 PLTFFGPNTPSSIFPNFPFFSPPSNPSP 89
          P +FFGPNTPSSIFPNFPFFSPP+NPSP
Sbjct: 61 PFSFFGPNTPSSIFPNFPFFSPPTNPSP 87

[Close]
BLAST of MELO3C018597 vs. NCBI nr
Match: gi|700188528|gb|KGN43761.1| (hypothetical protein Csa_7G066190 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 9.6e-37
Identity = 79/88 (89.77%), Postives = 84/88 (95.45%), Query Frame = 1 

Query: 1  MARFTLLVAFLATLLLSSLSSSSSFSSSSTIVSRKLLASDFPELPDFNVPPFYPEFRLPP 60
          MARFTLL+AF+ATLLLSSLSSSSS SSSS IVSRKLLASDFP LPDFNVPPFYPEF+LPP
Sbjct: 1  MARFTLLIAFVATLLLSSLSSSSS-SSSSIIVSRKLLASDFPGLPDFNVPPFYPEFKLPP 60

Query: 61 PLTFFGPNTPSSIFPNFPFFSPPSNPSP 89
          P +FFGPNTPSSIFPNFPFFSPP+NPSP
Sbjct: 61 PFSFFGPNTPSSIFPNFPFFSPPTNPSP 87

The following BLAST results are available for this feature:
BLAST of MELO3C018597 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K7G8_CUCSA6.7e-3789.77Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066190 PE=4 SV=1[more]
BLAST of MELO3C018597 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700188528|gb|KGN43761.1|9.6e-3789.77hypothetical protein Csa_7G066190 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU49919melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018597T1MELO3C018597T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU49919MU49919transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C018597CsaV3_7G006950Cucumber (Chinese Long) v3cucmeB548
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C018597Wild cucumber (PI 183967)cpimeB538
MELO3C018597Cucumber (Chinese Long) v2cumeB530
MELO3C018597Watermelon (Charleston Gray)mewcgB168
MELO3C018597Watermelon (Charleston Gray)mewcgB176
MELO3C018597Watermelon (97103) v1mewmB191
MELO3C018597Watermelon (97103) v1mewmB207
MELO3C018597Cucurbita pepo (Zucchini)cpemeB220
MELO3C018597Cucurbita pepo (Zucchini)cpemeB604
MELO3C018597Cucurbita pepo (Zucchini)cpemeB613
MELO3C018597Bottle gourd (USVL1VR-Ls)lsimeB247
MELO3C018597Bottle gourd (USVL1VR-Ls)lsimeB250
MELO3C018597Cucumber (Gy14) v2cgybmeB468
MELO3C018597Silver-seed gourdcarmeB0289
MELO3C018597Silver-seed gourdcarmeB0290
MELO3C018597Silver-seed gourdcarmeB0726
MELO3C018597Watermelon (97103) v2mewmbB218
MELO3C018597Watermelon (97103) v2mewmbB224
MELO3C018597Wax gourdmewgoB219
MELO3C018597Wax gourdmewgoB220
MELO3C018597Melon (DHL92) v3.5.1memeB094
MELO3C018597Cucumber (Gy14) v1cgymeB379
MELO3C018597Cucurbita maxima (Rimu)cmameB096
MELO3C018597Cucurbita maxima (Rimu)cmameB098
MELO3C018597Cucurbita maxima (Rimu)cmameB457
MELO3C018597Cucurbita maxima (Rimu)cmameB463
MELO3C018597Cucurbita moschata (Rifu)cmomeB085
MELO3C018597Cucurbita moschata (Rifu)cmomeB094
MELO3C018597Cucurbita moschata (Rifu)cmomeB449
MELO3C018597Cucurbita moschata (Rifu)cmomeB454