MELO3C018596 (gene) Melon (DHL92) v3.5.1

NameMELO3C018596
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPeptidyl-prolyl cis-trans isomerase
Locationchr1 : 1369018 .. 1372570 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGGTTAATCCAATCATTATTAACCAAAGGTACTTAGAACCCTAAGGCCTCAACACAAAGCAGAGGGAGAGAGTTTAGAACCACAAAGCAAAAATGGGAGTAGAGAAAGAGTTGCTGAGATCTGGAACCGGTCCCAAACCCACCGCCGGACAGTTGGTCACCGTCCACTGCACCGGCTTCGGTCTGTCTTCTTCCTTTACCCATTTCTTTCTTCAACAAAACCCTAATCTCGAAATGTTTAATATCTTTGCTTTCTTTGGTTGCCATTAAATATGCATGTGAAAACAATGTTTGGGTCTGTAATCGCCTTTCGTTTTACTTCACACTTTCAACTACATCGCCATTTCTTTACTCTTTCTTTCGTTGTTTATTTAGGATTGCCAATCCAGTCGAATCATCCAAAAAGCCTTTTTTTTTTTAAAACTCAATTGGGTCTATCTAGTGTTTTTGATCCTCACGATGATGAGTTGTGAGATTTAATTCTCATTGATGGGTTACTCTCTTTTCTCTGATTTTGTACTCATACTGCTCATCCCTATGTGGATCTCTCTGTGCATTTAATTTCTTAAAAGGCTTTTAAGTATTAAACCATCTCCAACATTGAACTCAAGCAAAATGTTTACTGATTGATCTTGTATGCATAGCTACTATTATGTTATTACATTTAAAGTACTGAAAGCTGATATGGTTATGTAAGACTTGTTTCTTTCTTTCTTTCTTTTTTTACTCAAACTGCTCATCAAGATGTTTATCTCATTTTCCTCACTGTTGAATTTCTTCTGCAGGAAAGAATGGCAATTTGTCTGAGAAATTTTGGAGGTAGGTTGTTTTCCTGTCCTCATTGTATTAAATGTGCATGCCCATGCACAATTTGTTCATTGATGTATAATTTTCTTTTGTCTAGCACAAAGGACCCTGGACAGAAGCCTTTCTCATTTAAAATTGGTCAAGGCGCAGTTATAAAAGGTACTTGTCCTGTATATTCTCTTAGGAGTTGCTTAAAAAAATAGAACACTTTTGCATTCAATTATCAATCAAACACTTATTTTAGTTTTTGAACTATTTCTTTTCCTCCTTCAACTATGAAAGTTTATCCTTTTTGGGGTCATTTTTTTTCCTTCCAAATTCATCTTTGGAAATATCAGGGACAAAATTATCTTTAGCAGTGTTTCTTCAATCGAAATTAAGATTGATCTGATTGGCCGATTGTTGGAAGAACTATGTTTATAAATTGTAGATGCTCGGTAACTCATAGTCTTATCTGCAAAAAGCATATAGGTGATTTGTGTGAACACTTTAAAATCTACACCACCATTACTGGATGTAAGTTATCTACCTTTGCAATAGTGAGGTGACAAACTTAGAACTGAGAACTAAATCAAGC

mRNA sequence

GTGGTTAATCCAATCATTATTAACCAAAGGTACTTAGAACCCTAAGGCCTCAACACAAAGCAGAGGGAGAGAGTTTAGAACCACAAAGCAAAAATGGGAGTAGAGAAAGAGTTGCTGAGATCTGGAACCGGTCCCAAACCCACCGCCGGACAGTTGGTCACCGTCCACTGCACCGGCTTCGGAAAGAATGGCAATTTGTCTGAGAAATTTTGGAGCACAAAGGACCCTGGACAGAAGCCTTTCTCATTTAAAATTGGTCAAGGCGCAGTTATAAAAGGGACAAAATTATCTTTAGCAGTGTTTCTTCAATCGAAATTAAGATTGATCTGATTGGCCGATTGTTGGAAGAACTATGTTTATAAATTGTAGATGCTCGGTAACTCATAGTCTTATCTGCAAAAAGCATATAGGTGATTTGTGTGAACACTTTAAAATCTACACCACCATTACTGGATGTAAGTTATCTACCTTTGCAATAGTGAGGTGACAAACTTAGAACTGAGAACTAAATCAAGC

Coding sequence (CDS)

ATGGGAGTAGAGAAAGAGTTGCTGAGATCTGGAACCGGTCCCAAACCCACCGCCGGACAGTTGGTCACCGTCCACTGCACCGGCTTCGGAAAGAATGGCAATTTGTCTGAGAAATTTTGGAGCACAAAGGACCCTGGACAGAAGCCTTTCTCATTTAAAATTGGTCAAGGCGCAGTTATAAAAGGGACAAAATTATCTTTAGCAGTGTTTCTTCAATCGAAATTAAGATTGATCTGA

Protein sequence

MGVEKELLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVIKGTKLSLAVFLQSKLRLI*
BLAST of MELO3C018596 vs. Swiss-Prot
Match: FKB12_VICFA (Peptidyl-prolyl cis-trans isomerase FKBP12 OS=Vicia faba GN=FKBP12 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.2e-24
Identity = 48/62 (77.42%), Postives = 56/62 (90.32%), Query Frame = 1

Query: 1  MGVEKELLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60
          MGVEK+++R+GTGP P+ GQ VTVHCTG+GKNG+LS+KFWSTKDPGQ PF+FKIGQG+VI
Sbjct: 1  MGVEKQIIRAGTGPNPSRGQNVTVHCTGYGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVI 60

Query: 61 KG 63
          KG
Sbjct: 61 KG 62

BLAST of MELO3C018596 vs. Swiss-Prot
Match: FKB12_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP12 OS=Arabidopsis thaliana GN=FKBP12 PE=1 SV=2)

HSP 1 Score: 109.0 bits (271), Expect = 2.4e-23
Identity = 48/62 (77.42%), Postives = 54/62 (87.10%), Query Frame = 1

Query: 1  MGVEKELLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60
          MGVEK+++R G GPKP  GQ VTVHCTGFGK+G+LS+KFWSTKD GQKPFSF+IG+GAVI
Sbjct: 1  MGVEKQVIRPGNGPKPAPGQTVTVHCTGFGKDGDLSQKFWSTKDEGQKPFSFQIGKGAVI 60

Query: 61 KG 63
          KG
Sbjct: 61 KG 62

BLAST of MELO3C018596 vs. Swiss-Prot
Match: FKBP_ASPOR (FK506-binding protein 1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=fpr1 PE=3 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 2.4e-07
Identity = 27/68 (39.71%), Postives = 39/68 (57.35%), Query Frame = 1

Query: 1  MGVEKELLRSGTGPKPTAGQLVTVHCTGF------GKNGNLSEKFWSTKDPGQKPFSFKI 60
          MGVE++++  G+GP P +G  V++H TG+         G   ++F S++ PG+ P    I
Sbjct: 1  MGVERKIITRGSGPSPASGDKVSIHYTGWIYDPKKANKGFQGKQFDSSRSPGRGPLVVNI 60

Query: 61 GQGAVIKG 63
          GQG VIKG
Sbjct: 61 GQGKVIKG 68

BLAST of MELO3C018596 vs. TrEMBL
Match: A0A0A0K2N3_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_7G066210 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.9e-27
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 1

Query: 1  MGVEKELLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60
          MG+EKE+LRSGTGPKP AGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI
Sbjct: 1  MGIEKEVLRSGTGPKPAAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60

Query: 61 KG 63
          KG
Sbjct: 61 KG 62

BLAST of MELO3C018596 vs. TrEMBL
Match: A0A022PSI4_ERYGU (Peptidyl-prolyl cis-trans isomerase OS=Erythranthe guttata GN=MIMGU_mgv1a016480mg PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 5.8e-24
Identity = 52/62 (83.87%), Postives = 59/62 (95.16%), Query Frame = 1

Query: 1  MGVEKELLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60
          MG+EKELLR+GTGPKP +GQ VTVHCTGFGKNG+LS+KFWSTKDPGQKPF+FKIGQG VI
Sbjct: 9  MGIEKELLRAGTGPKPVSGQKVTVHCTGFGKNGDLSKKFWSTKDPGQKPFTFKIGQGDVI 68

Query: 61 KG 63
          +G
Sbjct: 69 RG 70

BLAST of MELO3C018596 vs. TrEMBL
Match: A0A0B2RNX1_GLYSO (Peptidyl-prolyl cis-trans isomerase OS=Glycine soja GN=glysoja_005594 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 7.5e-24
Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 1

Query: 1  MGVEKELLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60
          MGVEK+LLRSGTGPKP  GQ VTVHCTGFGKNG+LS+KFWSTKDPGQ PF+FKIGQG+VI
Sbjct: 1  MGVEKQLLRSGTGPKPIPGQNVTVHCTGFGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVI 60

Query: 61 KG 63
          KG
Sbjct: 61 KG 62

BLAST of MELO3C018596 vs. TrEMBL
Match: C6T190_SOYBN (Peptidyl-prolyl cis-trans isomerase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 7.5e-24
Identity = 53/62 (85.48%), Postives = 58/62 (93.55%), Query Frame = 1

Query: 1  MGVEKELLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60
          MGVEK+LLRSGTGPKP  GQ VTVHCTGFGKNG+LS+KFWSTKDPGQ PF+FKIGQG+VI
Sbjct: 1  MGVEKQLLRSGTGPKPIPGQNVTVHCTGFGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVI 60

Query: 61 KG 63
          KG
Sbjct: 61 KG 62

BLAST of MELO3C018596 vs. TrEMBL
Match: B9S9F5_RICCO (Peptidyl-prolyl cis-trans isomerase OS=Ricinus communis GN=RCOM_0884730 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-23
Identity = 52/62 (83.87%), Postives = 57/62 (91.94%), Query Frame = 1

Query: 1  MGVEKELLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60
          MGVEK+L+R G GPKP AGQ VTVHCTGFGKNG+LS+KFWSTKDPGQKPF+FKIGQG VI
Sbjct: 1  MGVEKQLIRPGNGPKPAAGQTVTVHCTGFGKNGDLSQKFWSTKDPGQKPFTFKIGQGNVI 60

Query: 61 KG 63
          KG
Sbjct: 61 KG 62

BLAST of MELO3C018596 vs. TAIR10
Match: AT5G64350.1 (AT5G64350.1 FK506-binding protein 12)

HSP 1 Score: 109.0 bits (271), Expect = 1.4e-24
Identity = 48/62 (77.42%), Postives = 54/62 (87.10%), Query Frame = 1

Query: 1  MGVEKELLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60
          MGVEK+++R G GPKP  GQ VTVHCTGFGK+G+LS+KFWSTKD GQKPFSF+IG+GAVI
Sbjct: 1  MGVEKQVIRPGNGPKPAPGQTVTVHCTGFGKDGDLSQKFWSTKDEGQKPFSFQIGKGAVI 60

Query: 61 KG 63
          KG
Sbjct: 61 KG 62

BLAST of MELO3C018596 vs. NCBI nr
Match: gi|659110267|ref|XP_008455137.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12 [Cucumis melo])

HSP 1 Score: 132.9 bits (333), Expect = 2.5e-28
Identity = 62/62 (100.00%), Postives = 62/62 (100.00%), Query Frame = 1

Query: 1  MGVEKELLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60
          MGVEKELLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI
Sbjct: 1  MGVEKELLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60

Query: 61 KG 63
          KG
Sbjct: 61 KG 62

BLAST of MELO3C018596 vs. NCBI nr
Match: gi|449438232|ref|XP_004136893.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12 [Cucumis sativus])

HSP 1 Score: 129.4 bits (324), Expect = 2.7e-27
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 1

Query: 1  MGVEKELLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60
          MG+EKE+LRSGTGPKP AGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI
Sbjct: 1  MGIEKEVLRSGTGPKPAAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60

Query: 61 KG 63
          KG
Sbjct: 61 KG 62

BLAST of MELO3C018596 vs. NCBI nr
Match: gi|729361839|ref|XP_010546350.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12 [Tarenaya hassleriana])

HSP 1 Score: 120.2 bits (300), Expect = 1.7e-24
Identity = 53/62 (85.48%), Postives = 61/62 (98.39%), Query Frame = 1

Query: 1  MGVEKELLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60
          MGVEKE++R+GTGPKP+AGQ VTVHCTGFGKNG+LS+KFWSTKDPGQKPFSF+IG+GAVI
Sbjct: 1  MGVEKEVIRAGTGPKPSAGQTVTVHCTGFGKNGDLSQKFWSTKDPGQKPFSFQIGKGAVI 60

Query: 61 KG 63
          KG
Sbjct: 61 KG 62

BLAST of MELO3C018596 vs. NCBI nr
Match: gi|848930069|ref|XP_012828327.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12-like [Erythranthe guttata])

HSP 1 Score: 117.9 bits (294), Expect = 8.3e-24
Identity = 52/62 (83.87%), Postives = 59/62 (95.16%), Query Frame = 1

Query: 1  MGVEKELLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60
          MG+EKELLR+GTGPKP +GQ VTVHCTGFGKNG+LS+KFWSTKDPGQKPF+FKIGQG VI
Sbjct: 9  MGIEKELLRAGTGPKPVSGQKVTVHCTGFGKNGDLSKKFWSTKDPGQKPFTFKIGQGDVI 68

Query: 61 KG 63
          +G
Sbjct: 69 RG 70

BLAST of MELO3C018596 vs. NCBI nr
Match: gi|720054057|ref|XP_010272931.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12 isoform X2 [Nelumbo nucifera])

HSP 1 Score: 117.9 bits (294), Expect = 8.3e-24
Identity = 52/62 (83.87%), Postives = 59/62 (95.16%), Query Frame = 1

Query: 1  MGVEKELLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60
          MGVEK++LR+G GPKP AGQ VTVHCTGFGKNG+LS+KFWSTKDPGQKPF+FKIGQG+VI
Sbjct: 1  MGVEKQVLRAGNGPKPVAGQSVTVHCTGFGKNGDLSQKFWSTKDPGQKPFTFKIGQGSVI 60

Query: 61 KG 63
          KG
Sbjct: 61 KG 62

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
FKB12_VICFA2.2e-2477.42Peptidyl-prolyl cis-trans isomerase FKBP12 OS=Vicia faba GN=FKBP12 PE=1 SV=1[more]
FKB12_ARATH2.4e-2377.42Peptidyl-prolyl cis-trans isomerase FKBP12 OS=Arabidopsis thaliana GN=FKBP12 PE=... [more]
FKBP_ASPOR2.4e-0739.71FK506-binding protein 1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=fp... [more]
Match NameE-valueIdentityDescription
A0A0A0K2N3_CUCSA1.9e-2795.16Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_7G066210 PE=4 SV=1[more]
A0A022PSI4_ERYGU5.8e-2483.87Peptidyl-prolyl cis-trans isomerase OS=Erythranthe guttata GN=MIMGU_mgv1a016480m... [more]
A0A0B2RNX1_GLYSO7.5e-2485.48Peptidyl-prolyl cis-trans isomerase OS=Glycine soja GN=glysoja_005594 PE=4 SV=1[more]
C6T190_SOYBN7.5e-2485.48Peptidyl-prolyl cis-trans isomerase OS=Glycine max PE=2 SV=1[more]
B9S9F5_RICCO1.3e-2383.87Peptidyl-prolyl cis-trans isomerase OS=Ricinus communis GN=RCOM_0884730 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT5G64350.11.4e-2477.42 FK506-binding protein 12[more]
Match NameE-valueIdentityDescription
gi|659110267|ref|XP_008455137.1|2.5e-28100.00PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12 [Cucumis melo][more]
gi|449438232|ref|XP_004136893.1|2.7e-2795.16PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12 [Cucumis sativus][more]
gi|729361839|ref|XP_010546350.1|1.7e-2485.48PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12 [Tarenaya hassleriana][more]
gi|848930069|ref|XP_012828327.1|8.3e-2483.87PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12-like [Erythranthe guttata][more]
gi|720054057|ref|XP_010272931.1|8.3e-2483.87PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12 isoform X2 [Nelumbo nucife... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001179PPIase_FKBP_dom
IPR023566PPIase_FKBP
IPR001179PPIase_FKBP_dom
IPR023566PPIase_FKBP
IPR001179PPIase_FKBP_dom
IPR023566PPIase_FKBP
IPR001179PPIase_FKBP_dom
IPR023566PPIase_FKBP
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
GO:0006457protein folding
GO:0006457protein folding
GO:0006457protein folding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009086 methionine biosynthetic process
biological_process GO:0006457 protein folding
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation
biological_process GO:0061077 chaperone-mediated protein folding
biological_process GO:0008150 biological_process
cellular_component GO:0005829 cytosol
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0005528 FK506 binding
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU45273melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018596T1MELO3C018596T1mRNA
MELO3C018596T2MELO3C018596T2mRNA
MELO3C018596T3MELO3C018596T3mRNA
MELO3C018596T4MELO3C018596T4mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU45273MU45273transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 14..109
score: 3.1
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROFILEPS50059FKBP_PPIASEcoord: 19..112
score: 25
IPR023566Peptidyl-prolyl cis-trans isomerase, FKBP-typePANTHERPTHR10516PEPTIDYL-PROLYL CIS-TRANS ISOMERASEcoord: 1..112
score: 7.9
NoneNo IPR availableGENE3DG3DSA:3.10.50.40coord: 2..111
score: 3.1
NoneNo IPR availablePANTHERPTHR10516:SF214PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP12coord: 1..112
score: 7.9
NoneNo IPR availableunknownSSF54534FKBP-likecoord: 2..110
score: 4.52

The following gene(s) are paralogous to this gene:

None