CmoCh19G004910 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh19G004910
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Peptidyl-prolyl cis-trans isomerase
Location	Cmo_Chr19 : 5849499 .. 5853524 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAAATTTCTATAAAATAAAGTATCGTCTATAACCAAGATTAAGCTGTGGAGGTACTTGAACCCTAAGCCCCCCCTTAACCAAACAAACCACAGAGAGAGAGCTTCGCAACACAAAGGAACAATGGGAGTGGAGAAGGAGGTGCTGAGATCTGGAACCGGTCCCAAACCCGTCCCAGGACAGTTGGTCACCGTCCACTGCACCGGATTCGGTCTGTTCCCCTTATCCATTTCTCTCTTCTACAAAACCCTAATCTCCATGTGTTTAATCTGTATGGTTGCAAGAAAATGCCTGTGGATCAATGTTTGGGACTGTAATCGTGTTCATTTTAGTCCATACTTCGAACCAGATCCAATTTCTTCGCTCTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTATTTGTTTATTTAGGAATTTCAATTGAATCATGTAACTCTCTTTTTCCTCATTTGAGTTTATCTGCTGTTTGATTTTTACGATTTTTTTTTCTTTTGTTGATTATTATTATTGATTCTGGAAGTACGATTGAAATGATGAATCGTGAGATTGATTCTGAATGATGGGATACTCACTCAGGATCATACTGCGTAATCAAGATGTGTATCTCTTTGTGCTTTTGATTTCTTAAGAGACCATAGATTATTAAACAATGCTCCAATTCTGAACTCAAGTTTAAAGTACTGAAAGTTGATGTGTCTATGTAAGAATCTGATAGTTGGGTTAGTGATTTTCCATTAGAGATTGATGTATGAATGAAGGGAAATCATTTCTTCTCCTTCTCTTTAATGTTGATCTCTGTGTTTTGGAAGATGGACATAAACCAAGTGATCCAATGTTTGGTTGTTTCCTCACCAGGTTCTCCCGCAACTCGTTTTTCTTTATTTTCCTCACTGTTGAATTTCTTCTGCAGGGAAAAATGGCAACTTGTCTGAGAAGTTTTGGAGGTAAGTTGTTTTCCTGTCTCTTTGTATCAAATGTGCATGCCATGTACAATCTGTTTATTGATGTATAATTTTCTCTTCTTTAGCACAAAGGACCCTGGACAGAAGCCTTTCTCATTCAAAATCGGTCAAGGCTCAGTTATAAAAGGTACTTGTCCTGTATATTTCTCTTTGGAGTTGCTTAAGAAAACTGAACACTTCTGCATTTCATCATCAATCAAATGCTCATTTTTGTCAGCTTTTCAAATTTTTTTTCTTCACATTCAACTTTGAAAAAATTAGGGACAAAATTGAAAAATGATTATACCTTTAGGACGAAATTATATTCAGTATAGTCCATTCATTGAAATTATATTCAGTATAGTCCATTCAATGAAATTATATTCAGTATAGTCCATTCAATGAAAGTTAAGATTGATTTGGGTGCCCTAAGATTGGAAGAACTATGTTTATAAAGCGTGGATACTAAGTCACTCGTACTCTTTTCTGCAAAAAGCACATGGCTGTTTCATGTACAAGTTATGTAACCTTTTCAATAGTGAGGATTGTAAACTTAGAACTGAAATCTAAATCGAGCATTTTGAAGATTGAGGATGAATAATAAAGTAATGATCGTTCAGGGCCAATATAAGAGTTGAATAATAATTAGAAAGGTTAAAAATGCTTTACATCTTTGATTCAGGCTTCTTTATTTCATTGGTGTAACAAAAAAACTTTTTTAACTTTCCTTTTAAGTACGTTCTCTTTCCTTTGCCATATCGACAGTTCATTGTTGATTTGTTTTGTTCTGTTTTCAAATCGAGAATGTATGTACTTGCAGCTTTATATGGCTCAGTAAGTCACTCTCTAAAAGTTGGTTTACTGTTTTATCTTTAATCTCACGTATGATTTATGTTTCATGTTACAAACATTTAAGCATAATGGATGCAATTAAGTCTTTGTTGTGCAGATCACACTCAACAGTGGATCCTATGTACAGGGATGCTTAGAAAATTGTGTTAAAATTTACTGCTAATTCTAGAAAAATTTATTTGTAAACTAAAATACTCTGTATTGAATGTTTGTTGGTTAATATCACCTACATGCAGGGCTTTGTTGGCTATTTGAATGTTTGTTTTGAATCTGAATTTGATTCATCTCTCTGATTGAATTTATAGGATGGGATGAAGGTGTGCTTGGCATGCAACTGGGAGAAGTTGCTCGTCTCCGGGTAAAATATTTAATTCAAATTTCTTGGTTTCAAAATGGTAGCATGCTCTTTAAACAACCTATAGTTTGTAATCAATATTCTATTTTTGTTTATCAGCTTAAACATGTATTGAACTCCTATTTTGGTTTTTACATTTTGTTGGTTAGAGTTTTGCTCCTGTCACTAAGATATGTTCCAATGTATTATTTGGCCGAAAATTTTCTTCTTGAGCAACTTGGTGAAGTCAGAATGGTTTTAAGATGTCCACTTCTGAACCTAAGATGTAACTATACATATTTCTCTTGTAATGGTTAATTTAGGTCGTGGTGAATAACCATTTGACTATAAGTTCATATGTTTTATTATCCACTTTCATCTCGTGTTTTAAAAAATTAAACCAAGTTTTGTAAATTGAAATAACTAGTTTTCAAAAACTTGTTTTTCATGCAAGAATTTGACTAGTAATTGAAGTGTTTCTTTCACAAAGATGAAAACCACAATTGAAAATACAGAAAACAAAAAATGAAATGTTATCAAACAAGGCCTTAATGTTCAGTCCATTAAGACTTCCAAAATCAAGCATGCAATTTCAGGTTACTTAGTTTGATGGTAGCCATTCTCCTACGGATCCTGATCCCCCGATAACATTATAAAAAAAGGCCCTTATTGAAAGCATATTATTTTCGTATAAGTATATTGGAGTCGTGGCTGCTGTTACAGCATTATGTCTGTGTAACAAATCACCTCTACTGCTGCCTTTCCTGATTATATCTTCTATTTTAAGCTTTATGTGATGGTTAGTGCAGTAAACATTTGGGTTCTGGTTTTTGTGCTTCCTGTAACTTTCTATCTTGTCACACTGAGAGCCATAAGTTGCAGGCATCTAATTAGGCGATAGAATACTGTGATTTGAACATATATTTATCTTACACGTCTTGTTTTCTTCCATGTTGAATGCTTCTTTTCCAGTGCTCCCCAGACTATGCTTATGGCGCCAGTGGGTTCCCTGCATGGGGCATACAACCAAATTCGGTGTTGGTCTTTGAAATTGAAGTTCTGAGTGCTCAGTAATCCAATCTCTCTGCACTGCTAATGTAGTTTGTTATGATCAGATCTGCTTTTGGCTGCGTTTTGTTTTTTAAATCTATCCAGAGATAGTTTGTATGTTTAAATTCAGGTAACTTTTGAATCTCCTGGTCATGAAGCAGTCAGTATCTGCTTCTATTATAAGTGCATTAATAAGAAGTGCTTAGTGTGCTTTAATGATGTCCATTCCTTTTCTTTCCCCATATATTTCTATATGAATCATTACCATTTATTTGATCTGTTCTAC

mRNA sequence

TTAAAATTTCTATAAAATAAAGTATCGTCTATAACCAAGATTAAGCTGTGGAGGTACTTGAACCCTAAGCCCCCCCTTAACCAAACAAACCACAGAGAGAGAGCTTCGCAACACAAAGGAACAATGGGAGTGGAGAAGGAGGTGCTGAGATCTGGAACCGGTCCCAAACCCGTCCCAGGACAGTTGGTCACCGTCCACTGCACCGGATTCGGGAAAAATGGCAACTTGTCTGAGAAGTTTTGGAGCACAAAGGACCCTGGACAGAAGCCTTTCTCATTCAAAATCGGTCAAGGCTCAGTTATAAAAGGATGGGATGAAGGTGTGCTTGGCATGCAACTGGGAGAAGTTGCTCGTCTCCGGTGCTCCCCAGACTATGCTTATGGCGCCAGTGGGTTCCCTGCATGGGGCATACAACCAAATTCGGTGTTGGTCTTTGAAATTGAAGTTCTGAGTGCTCAGTAATCCAATCTCTCTGCACTGCTAATGTAGTTTGTTATGATCAGATCTGCTTTTGGCTGCGTTTTGTTTTTTAAATCTATCCAGAGATAGTTTGTATGTTTAAATTCAGGTAACTTTTGAATCTCCTGGTCATGAAGCAGTCAGTATCTGCTTCTATTATAAGTGCATTAATAAGAAGTGCTTAGTGTGCTTTAATGATGTCCATTCCTTTTCTTTCCCCATATATTTCTATATGAATCATTACCATTTATTTGATCTGTTCTAC

Coding sequence (CDS)

ATGGGAGTGGAGAAGGAGGTGCTGAGATCTGGAACCGGTCCCAAACCCGTCCCAGGACAGTTGGTCACCGTCCACTGCACCGGATTCGGGAAAAATGGCAACTTGTCTGAGAAGTTTTGGAGCACAAAGGACCCTGGACAGAAGCCTTTCTCATTCAAAATCGGTCAAGGCTCAGTTATAAAAGGATGGGATGAAGGTGTGCTTGGCATGCAACTGGGAGAAGTTGCTCGTCTCCGGTGCTCCCCAGACTATGCTTATGGCGCCAGTGGGTTCCCTGCATGGGGCATACAACCAAATTCGGTGTTGGTCTTTGAAATTGAAGTTCTGAGTGCTCAGTAA

Homology

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BLAST of CmoCh19G004910 vs. Swiss-Prot
Match: FKB12_VICFA (Peptidyl-prolyl cis-trans isomerase FKBP12 OS=Vicia faba GN=FKBP12 PE=1 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 1.3e-54
Identity = 96/112 (85.71%), Postives = 104/112 (92.86%), Query Frame = 1


Query: 1   MGVEKEVLRSGTGPKPVPGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGSVI 60
           MGVEK+++R+GTGP P  GQ VTVHCTG+GKNG+LS+KFWSTKDPGQ PF+FKIGQGSVI
Sbjct: 1   MGVEKQIIRAGTGPNPSRGQNVTVHCTGYGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVI 60

Query: 61  KGWDEGVLGMQLGEVARLRCSPDYAYGASGFPAWGIQPNSVLVFEIEVLSAQ 113
           KGWDEGVLGMQLGEVARLRCSPDYAYGA GFPAWGIQPNSVL FEIEVL AQ
Sbjct: 61  KGWDEGVLGMQLGEVARLRCSPDYAYGAGGFPAWGIQPNSVLEFEIEVLRAQ 112

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BLAST of CmoCh19G004910 vs. Swiss-Prot
Match: FKB12_ARATH (Peptidyl-prolyl cis-trans isomerase FKBP12 OS=Arabidopsis thaliana GN=FKBP12 PE=1 SV=2)

HSP 1 Score: 208.4 bits (529), Expect = 4.1e-53
Identity = 93/112 (83.04%), Postives = 103/112 (91.96%), Query Frame = 1


Query: 1   MGVEKEVLRSGTGPKPVPGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGSVI 60
           MGVEK+V+R G GPKP PGQ VTVHCTGFGK+G+LS+KFWSTKD GQKPFSF+IG+G+VI
Sbjct: 1   MGVEKQVIRPGNGPKPAPGQTVTVHCTGFGKDGDLSQKFWSTKDEGQKPFSFQIGKGAVI 60

Query: 61  KGWDEGVLGMQLGEVARLRCSPDYAYGASGFPAWGIQPNSVLVFEIEVLSAQ 113
           KGWDEGV+GMQ+GEVARLRCS DYAYGA GFPAWGIQPNSVL FEIEVLS Q
Sbjct: 61  KGWDEGVIGMQIGEVARLRCSSDYAYGAGGFPAWGIQPNSVLDFEIEVLSVQ 112

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BLAST of CmoCh19G004910 vs. Swiss-Prot
Match: FKBP_SCHPO (Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=fkh1 PE=3 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-21
Identity = 57/111 (51.35%), Postives = 72/111 (64.86%), Query Frame = 1


Query: 1   MGVEKEVLRSGTGPK-PVPGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGSV 60
           MGVEK+V+ SG G   P PG  +T+H TG   NG   +KF S+ D G  PF   IG G +
Sbjct: 1   MGVEKQVISSGNGQDFPKPGDRITMHYTGTLTNG---KKFDSSVDRGS-PFVCTIGVGQL 60

Query: 61  IKGWDEGVLGMQLGEVARLRCSPDYAYGASGFPAWGIQPNSVLVFEIEVLS 111
           I+GWDEGV  M LGE A+L  +PDY YG  GFP   I PNS L+F++E+L+
Sbjct: 61  IRGWDEGVPKMSLGEKAKLTITPDYGYGPRGFPGL-IPPNSTLLFDVELLA 106

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BLAST of CmoCh19G004910 vs. Swiss-Prot
Match: FKBP_ASPOR (FK506-binding protein 1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=fpr1 PE=3 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.4e-21
Identity = 51/115 (44.35%), Postives = 70/115 (60.87%), Query Frame = 1


Query: 1   MGVEKEVLRSGTGPKPVPGQLVTVHCTGF------GKNGNLSEKFWSTKDPGQKPFSFKI 60
           MGVE++++  G+GP P  G  V++H TG+         G   ++F S++ PG+ P    I
Sbjct: 1   MGVERKIITRGSGPSPASGDKVSIHYTGWIYDPKKANKGFQGKQFDSSRSPGRGPLVVNI 60

Query: 61  GQGSVIKGWDEGVLGMQLGEVARLRCSPDYAYGASGFPAWGIQPNSVLVFEIEVL 110
           GQG VIKGWDEGV+ M LGE + L  +PDY YG     A  I  NS L+FE+E+L
Sbjct: 61  GQGKVIKGWDEGVMQMSLGEKSTLTITPDYGYGDKA--AGKIPANSTLIFEVELL 113

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BLAST of CmoCh19G004910 vs. Swiss-Prot
Match: FKBP_GIBZE (FK506-binding protein 1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=FPR1 PE=3 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 4.2e-21
Identity = 53/110 (48.18%), Postives = 70/110 (63.64%), Query Frame = 1


Query: 1   MGVEKEVLRSGTGPKPVPGQLVTVHCTGF--GKNGNLSEKFWSTKDPGQKPFSFKIGQGS 60
           MGVEK ++  G+GP P  GQ VT+  TG+   ++G   ++F ++   G+  F   IG G 
Sbjct: 1   MGVEKTIITQGSGPSPQVGQKVTMEYTGWLQKEDGTKGDQFDTSV--GRGDFVVNIGVGQ 60

Query: 61  VIKGWDEGVLGMQLGEVARLRCSPDYAYGASGFPAWGIQPNSVLVFEIEV 109
           VIKGWDEGV  M+LGE A L  SPDY YG  GFP   I PNS L+F++E+
Sbjct: 61  VIKGWDEGVTQMKLGEKATLHISPDYGYGPRGFPG-AIPPNSTLIFDVEL 107

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BLAST of CmoCh19G004910 vs. TrEMBL
Match: A0A0A0K2N3_CUCSA (Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_7G066210 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 6.6e-58
Identity = 106/112 (94.64%), Postives = 109/112 (97.32%), Query Frame = 1


Query: 1   MGVEKEVLRSGTGPKPVPGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGSVI 60
           MG+EKEVLRSGTGPKP  GQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQG+VI
Sbjct: 1   MGIEKEVLRSGTGPKPAAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60

Query: 61  KGWDEGVLGMQLGEVARLRCSPDYAYGASGFPAWGIQPNSVLVFEIEVLSAQ 113
           KGWDEGVLGMQ+GEVARLRCSPDYAYG SGFPAWGIQPNSVLVFEIEVLSAQ
Sbjct: 61  KGWDEGVLGMQVGEVARLRCSPDYAYGPSGFPAWGIQPNSVLVFEIEVLSAQ 112

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BLAST of CmoCh19G004910 vs. TrEMBL
Match: C6T190_SOYBN (Peptidyl-prolyl cis-trans isomerase OS=Glycine max PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.4e-55
Identity = 100/112 (89.29%), Postives = 108/112 (96.43%), Query Frame = 1


Query: 1   MGVEKEVLRSGTGPKPVPGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGSVI 60
           MGVEK++LRSGTGPKP+PGQ VTVHCTGFGKNG+LS+KFWSTKDPGQ PF+FKIGQGSVI
Sbjct: 1   MGVEKQLLRSGTGPKPIPGQNVTVHCTGFGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVI 60

Query: 61  KGWDEGVLGMQLGEVARLRCSPDYAYGASGFPAWGIQPNSVLVFEIEVLSAQ 113
           KGWDEGVLGMQ+GEVARLRCSPDYAYGA GFPAWGI+PNSVL FEIEVLSAQ
Sbjct: 61  KGWDEGVLGMQIGEVARLRCSPDYAYGAGGFPAWGIRPNSVLEFEIEVLSAQ 112

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BLAST of CmoCh19G004910 vs. TrEMBL
Match: A0A0F7H0Z4_9ROSI (Peptidyl-prolyl cis-trans isomerase OS=Melianthus villosus GN=FKBP12 PE=2 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.4e-55
Identity = 101/112 (90.18%), Postives = 108/112 (96.43%), Query Frame = 1


Query: 1   MGVEKEVLRSGTGPKPVPGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGSVI 60
           MGVEKEVLR+GTGP+PVPGQ VTVHCTGFGKNG+LS KFWSTKDPGQ PF+FKIGQGSVI
Sbjct: 1   MGVEKEVLRNGTGPRPVPGQSVTVHCTGFGKNGDLSMKFWSTKDPGQTPFTFKIGQGSVI 60

Query: 61  KGWDEGVLGMQLGEVARLRCSPDYAYGASGFPAWGIQPNSVLVFEIEVLSAQ 113
           KGWDEGVLGMQ+GE+ARLRCSPDYAYG SGFPAWGIQPNSVLVFEIEVLSA+
Sbjct: 61  KGWDEGVLGMQVGEIARLRCSPDYAYGPSGFPAWGIQPNSVLVFEIEVLSAR 112

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BLAST of CmoCh19G004910 vs. TrEMBL
Match: A0A0B2RNX1_GLYSO (Peptidyl-prolyl cis-trans isomerase OS=Glycine soja GN=glysoja_005594 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 2.4e-55
Identity = 100/112 (89.29%), Postives = 108/112 (96.43%), Query Frame = 1


Query: 1   MGVEKEVLRSGTGPKPVPGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGSVI 60
           MGVEK++LRSGTGPKP+PGQ VTVHCTGFGKNG+LS+KFWSTKDPGQ PF+FKIGQGSVI
Sbjct: 1   MGVEKQLLRSGTGPKPIPGQNVTVHCTGFGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVI 60

Query: 61  KGWDEGVLGMQLGEVARLRCSPDYAYGASGFPAWGIQPNSVLVFEIEVLSAQ 113
           KGWDEGVLGMQ+GEVARLRCSPDYAYGA GFPAWGI+PNSVL FEIEVLSAQ
Sbjct: 61  KGWDEGVLGMQIGEVARLRCSPDYAYGAGGFPAWGIRPNSVLEFEIEVLSAQ 112

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BLAST of CmoCh19G004910 vs. TrEMBL
Match: I3S3Y9_LOTJA (Peptidyl-prolyl cis-trans isomerase OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 6.8e-55
Identity = 100/112 (89.29%), Postives = 108/112 (96.43%), Query Frame = 1


Query: 1   MGVEKEVLRSGTGPKPVPGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGSVI 60
           MGVEK++LR GTGPKPVPGQ VTVHCTGFGKNG+LS++FWSTKDPGQKPF+FKIGQGSVI
Sbjct: 1   MGVEKQLLRPGTGPKPVPGQNVTVHCTGFGKNGDLSQQFWSTKDPGQKPFTFKIGQGSVI 60

Query: 61  KGWDEGVLGMQLGEVARLRCSPDYAYGASGFPAWGIQPNSVLVFEIEVLSAQ 113
           KGWDEGVLGMQ+GEVARLRCSPDYAYGA GFPAWGIQPNSVL FEIEVL+AQ
Sbjct: 61  KGWDEGVLGMQVGEVARLRCSPDYAYGAGGFPAWGIQPNSVLDFEIEVLNAQ 112

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BLAST of CmoCh19G004910 vs. TAIR10
Match: AT5G64350.1 (AT5G64350.1 FK506-binding protein 12)

HSP 1 Score: 208.4 bits (529), Expect = 2.3e-54
Identity = 93/112 (83.04%), Postives = 103/112 (91.96%), Query Frame = 1


Query: 1   MGVEKEVLRSGTGPKPVPGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGSVI 60
           MGVEK+V+R G GPKP PGQ VTVHCTGFGK+G+LS+KFWSTKD GQKPFSF+IG+G+VI
Sbjct: 1   MGVEKQVIRPGNGPKPAPGQTVTVHCTGFGKDGDLSQKFWSTKDEGQKPFSFQIGKGAVI 60

Query: 61  KGWDEGVLGMQLGEVARLRCSPDYAYGASGFPAWGIQPNSVLVFEIEVLSAQ 113
           KGWDEGV+GMQ+GEVARLRCS DYAYGA GFPAWGIQPNSVL FEIEVLS Q
Sbjct: 61  KGWDEGVIGMQIGEVARLRCSSDYAYGAGGFPAWGIQPNSVLDFEIEVLSVQ 112

[Close]

BLAST of CmoCh19G004910 vs. TAIR10
Match: AT3G55520.1 (AT3G55520.1 FKBP-like peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 77.8 bits (190), Expect = 4.7e-15
Identity = 42/114 (36.84%), Postives = 65/114 (57.02%), Query Frame = 1


Query: 2   GVEKEVLRSGTGPKPVPGQ---LVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGS 61
           GV K+++RS       P     +V VH  G        EK + T       FSF++G GS
Sbjct: 12  GVLKKIVRSAKPDAISPSDDLPVVDVHYEGILAE---DEKVFDTTREDNLVFSFELGTGS 71

Query: 62  VIKGWDEGVLGMQLGEVARLRCSPDYAYGASGFPAWGIQPNSVLVFEIEVLSAQ 113
           VI+ WD  +  M++GEVA++ C P+YAYG +G P   I P++ L+FE+E+++ +
Sbjct: 72  VIRSWDIALKTMKVGEVAKITCKPEYAYGRAGSPP-DIPPDATLIFEVELVACR 121

[Close]

BLAST of CmoCh19G004910 vs. TAIR10
Match: AT4G25340.1 (AT4G25340.1 FK506 BINDING PROTEIN 53)

HSP 1 Score: 77.0 bits (188), Expect = 8.1e-15
Identity = 42/111 (37.84%), Postives = 62/111 (55.86%), Query Frame = 1


Query: 3   VEKEVLRSGTGPKPVPGQLVTVHCTG-FGKNGNLSEKFWSTKDPGQKPFSFKIGQGSVIK 62
           VE+  +    G +  PG+ V+V   G   KNG + +      + G+ PF F++G GSVIK
Sbjct: 373 VEELSMGKPNGKRADPGKTVSVRYIGKLQKNGKIFDS-----NIGKSPFKFRLGIGSVIK 432

Query: 63  GWDEGVLGMQLGEVARLRCSPDYAYGASGFPAWGIQPNSVLVFEIEVLSAQ 113
           GWD GV GM++G+  +L   P   YG  G     I PNS L F++E+++ Q
Sbjct: 433 GWDVGVNGMRVGDKRKLTIPPSMGYGVKG-AGGQIPPNSWLTFDVELINVQ 477

[Close]

BLAST of CmoCh19G004910 vs. TAIR10
Match: AT5G48570.1 (AT5G48570.1 FKBP-type peptidyl-prolyl cis-trans isomerase family protein)

HSP 1 Score: 75.5 bits (184), Expect = 2.4e-14
Identity = 48/120 (40.00%), Postives = 65/120 (54.17%), Query Frame = 1


Query: 1   MGVEKEVLRSGTGPK----------PVPGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPF 60
           +G E E+ +SG   K          P  G  V VH TG   +G    KF S++D G  PF
Sbjct: 37  IGEEMEIGKSGLKKKLVKECEKWDTPENGDEVEVHYTGTLLDGT---KFDSSRDRGT-PF 96

Query: 61  SFKIGQGSVIKGWDEGVLGMQLGEVARLRCSPDYAYGASGFPAWGIQPNSVLVFEIEVLS 111
            F +GQG VIKGWD G+  M+ GE A     P+ AYG +G P   I PN+ L F++E+++
Sbjct: 97  KFTLGQGHVIKGWDLGIKTMKKGENAIFTIPPELAYGETGSPP-TIPPNATLQFDVELIA 151

[Close]

BLAST of CmoCh19G004910 vs. TAIR10
Match: AT5G45680.1 (AT5G45680.1 FK506-binding protein 13)

HSP 1 Score: 74.7 bits (182), Expect = 4.0e-14
Identity = 47/109 (43.12%), Postives = 61/109 (55.96%), Query Frame = 1


Query: 11  GTGPKPVPGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGSVIKGWDEGVLG- 70
           G GP+ V GQL+  H  G  +NG +   F S+ + G KP +F+IG G VIKGWD+G+LG 
Sbjct: 101 GYGPEAVKGQLIKAHYVGKLENGKV---FDSSYNRG-KPLTFRIGVGEVIKGWDQGILGS 160

Query: 71  -----MQLGEVARLRCSPDYAYGASGFPAWG----IQPNSVLVFEIEVL 110
                M  G    LR  P+ AYG  G    G    I P SVL+F+IE +
Sbjct: 161 DGIPPMLTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYI 205

[Close]

BLAST of CmoCh19G004910 vs. NCBI nr
Match: gi|449438232|ref|XP_004136893.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 9.5e-58
Identity = 106/112 (94.64%), Postives = 109/112 (97.32%), Query Frame = 1


Query: 1   MGVEKEVLRSGTGPKPVPGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGSVI 60
           MG+EKEVLRSGTGPKP  GQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQG+VI
Sbjct: 1   MGIEKEVLRSGTGPKPAAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60

Query: 61  KGWDEGVLGMQLGEVARLRCSPDYAYGASGFPAWGIQPNSVLVFEIEVLSAQ 113
           KGWDEGVLGMQ+GEVARLRCSPDYAYG SGFPAWGIQPNSVLVFEIEVLSAQ
Sbjct: 61  KGWDEGVLGMQVGEVARLRCSPDYAYGPSGFPAWGIQPNSVLVFEIEVLSAQ 112

[Close]

BLAST of CmoCh19G004910 vs. NCBI nr
Match: gi|659110267|ref|XP_008455137.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12 [Cucumis melo])

HSP 1 Score: 230.3 bits (586), Expect = 1.6e-57
Identity = 106/112 (94.64%), Postives = 109/112 (97.32%), Query Frame = 1


Query: 1   MGVEKEVLRSGTGPKPVPGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGSVI 60
           MGVEKE+LRSGTGPKP  GQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQG+VI
Sbjct: 1   MGVEKELLRSGTGPKPTAGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGAVI 60

Query: 61  KGWDEGVLGMQLGEVARLRCSPDYAYGASGFPAWGIQPNSVLVFEIEVLSAQ 113
           KGWDEGVLGMQ+GEVARLRCSPDYAYG SGFPAWGIQPNSVLVFEIEVLSAQ
Sbjct: 61  KGWDEGVLGMQVGEVARLRCSPDYAYGPSGFPAWGIQPNSVLVFEIEVLSAQ 112

[Close]

BLAST of CmoCh19G004910 vs. NCBI nr
Match: gi|351725045|ref|NP_001235799.1| (uncharacterized protein LOC100500283 [Glycine max])

HSP 1 Score: 222.6 bits (566), Expect = 3.4e-55
Identity = 100/112 (89.29%), Postives = 108/112 (96.43%), Query Frame = 1


Query: 1   MGVEKEVLRSGTGPKPVPGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGSVI 60
           MGVEK++LRSGTGPKP+PGQ VTVHCTGFGKNG+LS+KFWSTKDPGQ PF+FKIGQGSVI
Sbjct: 1   MGVEKQLLRSGTGPKPIPGQNVTVHCTGFGKNGDLSQKFWSTKDPGQNPFTFKIGQGSVI 60

Query: 61  KGWDEGVLGMQLGEVARLRCSPDYAYGASGFPAWGIQPNSVLVFEIEVLSAQ 113
           KGWDEGVLGMQ+GEVARLRCSPDYAYGA GFPAWGI+PNSVL FEIEVLSAQ
Sbjct: 61  KGWDEGVLGMQIGEVARLRCSPDYAYGAGGFPAWGIRPNSVLEFEIEVLSAQ 112

[Close]

BLAST of CmoCh19G004910 vs. NCBI nr
Match: gi|1012250846|ref|XP_015943554.1| (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12 [Arachis duranensis])

HSP 1 Score: 221.5 bits (563), Expect = 7.5e-55
Identity = 100/112 (89.29%), Postives = 108/112 (96.43%), Query Frame = 1


Query: 1   MGVEKEVLRSGTGPKPVPGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGSVI 60
           MGVEK+++R GTGPKPVPGQ VTVHCTG+GKNG+LS+KFWSTKDPGQ+PFSFKIGQGSVI
Sbjct: 1   MGVEKQLVRPGTGPKPVPGQNVTVHCTGYGKNGDLSQKFWSTKDPGQQPFSFKIGQGSVI 60

Query: 61  KGWDEGVLGMQLGEVARLRCSPDYAYGASGFPAWGIQPNSVLVFEIEVLSAQ 113
           KGWDEGVLGMQ+GEVARLRCSPDYAYGA GFPAWGIQPNSVL FEIEVLSAQ
Sbjct: 61  KGWDEGVLGMQVGEVARLRCSPDYAYGAGGFPAWGIQPNSVLEFEIEVLSAQ 112

[Close]

BLAST of CmoCh19G004910 vs. NCBI nr
Match: gi|388493830|gb|AFK34981.1| (unknown [Lotus japonicus])

HSP 1 Score: 221.1 bits (562), Expect = 9.8e-55
Identity = 100/112 (89.29%), Postives = 108/112 (96.43%), Query Frame = 1


Query: 1   MGVEKEVLRSGTGPKPVPGQLVTVHCTGFGKNGNLSEKFWSTKDPGQKPFSFKIGQGSVI 60
           MGVEK++LR GTGPKPVPGQ VTVHCTGFGKNG+LS++FWSTKDPGQKPF+FKIGQGSVI
Sbjct: 1   MGVEKQLLRPGTGPKPVPGQNVTVHCTGFGKNGDLSQQFWSTKDPGQKPFTFKIGQGSVI 60

Query: 61  KGWDEGVLGMQLGEVARLRCSPDYAYGASGFPAWGIQPNSVLVFEIEVLSAQ 113
           KGWDEGVLGMQ+GEVARLRCSPDYAYGA GFPAWGIQPNSVL FEIEVL+AQ
Sbjct: 61  KGWDEGVLGMQVGEVARLRCSPDYAYGAGGFPAWGIQPNSVLDFEIEVLNAQ 112

The following BLAST results are available for this feature:

BLAST of CmoCh19G004910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FKB12_VICFA	1.3e-54	85.71	Peptidyl-prolyl cis-trans isomerase FKBP12 OS=Vicia faba GN=FKBP12 PE=1 SV=1	[more]
FKB12_ARATH	4.1e-53	83.04	Peptidyl-prolyl cis-trans isomerase FKBP12 OS=Arabidopsis thaliana GN=FKBP12 PE=...	[more]
FKBP_SCHPO	1.1e-21	51.35	Peptidyl-prolyl cis-trans isomerase OS=Schizosaccharomyces pombe (strain 972 / A...	[more]
FKBP_ASPOR	1.4e-21	44.35	FK506-binding protein 1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=fp...	[more]
FKBP_GIBZE	4.2e-21	48.18	FK506-binding protein 1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9...	[more]

BLAST of CmoCh19G004910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2N3_CUCSA	6.6e-58	94.64	Peptidyl-prolyl cis-trans isomerase OS=Cucumis sativus GN=Csa_7G066210 PE=4 SV=1	[more]
C6T190_SOYBN	2.4e-55	89.29	Peptidyl-prolyl cis-trans isomerase OS=Glycine max PE=2 SV=1	[more]
A0A0F7H0Z4_9ROSI	2.4e-55	90.18	Peptidyl-prolyl cis-trans isomerase OS=Melianthus villosus GN=FKBP12 PE=2 SV=1	[more]
A0A0B2RNX1_GLYSO	2.4e-55	89.29	Peptidyl-prolyl cis-trans isomerase OS=Glycine soja GN=glysoja_005594 PE=4 SV=1	[more]
I3S3Y9_LOTJA	6.8e-55	89.29	Peptidyl-prolyl cis-trans isomerase OS=Lotus japonicus PE=2 SV=1	[more]

BLAST of CmoCh19G004910 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G64350.1	2.3e-54	83.04	FK506-binding protein 12	[more]
AT3G55520.1	4.7e-15	36.84	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT4G25340.1	8.1e-15	37.84	FK506 BINDING PROTEIN 53	[more]
AT5G48570.1	2.4e-14	40.00	FKBP-type peptidyl-prolyl cis-trans isomerase family protein	[more]
AT5G45680.1	4.0e-14	43.12	FK506-binding protein 13	[more]

BLAST of CmoCh19G004910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449438232\|ref\|XP_004136893.1\|	9.5e-58	94.64	PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12 [Cucumis sativus]	[more]
gi\|659110267\|ref\|XP_008455137.1\|	1.6e-57	94.64	PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12 [Cucumis melo]	[more]
gi\|351725045\|ref\|NP_001235799.1\|	3.4e-55	89.29	uncharacterized protein LOC100500283 [Glycine max]	[more]
gi\|1012250846\|ref\|XP_015943554.1\|	7.5e-55	89.29	PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP12 [Arachis duranensis]	[more]
gi\|388493830\|gb\|AFK34981.1\|	9.8e-55	89.29	unknown [Lotus japonicus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001179	PPIase_FKBP_dom
IPR023566	PPIase_FKBP

Vocabulary: **Biological Process**
Term	Definition
GO:0006457	protein folding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
biological_process	GO:0009086	methionine biosynthetic process
biological_process	GO:0000394	RNA splicing, via endonucleolytic cleavage and ligation
biological_process	GO:0008150	biological_process
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh19G004910.1	CmoCh19G004910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00254	FKBP_C	coord: 14..109 score: 7.6
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PROFILE	PS50059	FKBP_PPIASE	coord: 19..112 score: 25
IPR023566	Peptidyl-prolyl cis-trans isomerase, FKBP-type	PANTHER	PTHR10516	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 1..112 score: 3.1
None	No IPR available	GENE3D	G3DSA:3.10.50.40		coord: 2..111 score: 4.6
None	No IPR available	PANTHER	PTHR10516:SF214	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP12	coord: 1..112 score: 3.1
None	No IPR available	unknown	SSF54534	FKBP-like	coord: 2..110 score: 3.54

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh19G004910	Cucsa.218340	Cucumber (Gy14) v1	cgycmoB0630
CmoCh19G004910	CmaCh19G004740	Cucurbita maxima (Rimu)	cmacmoB508
CmoCh19G004910	Cla012892	Watermelon (97103) v1	cmowmB466
CmoCh19G004910	Csa7G066210	Cucumber (Chinese Long) v2	cmocuB526
CmoCh19G004910	MELO3C018596	Melon (DHL92) v3.5.1	cmomeB449
CmoCh19G004910	ClCG09G015820	Watermelon (Charleston Gray)	cmowcgB441
CmoCh19G004910	CSPI07G06010	Wild cucumber (PI 183967)	cmocpiB532
CmoCh19G004910	Lsi03G007200	Bottle gourd (USVL1VR-Ls)	cmolsiB468
CmoCh19G004910	Cp4.1LG15g03720	Cucurbita pepo (Zucchini)	cmocpeB481
CmoCh19G004910	MELO3C018596.2	Melon (DHL92) v3.6.1	cmomedB518
CmoCh19G004910	CsaV3_7G006970	Cucumber (Chinese Long) v3	cmocucB0630
CmoCh19G004910	Bhi05G000757	Wax gourd	cmowgoB0642
CmoCh19G004910	CsGy7G005680	Cucumber (Gy14) v2	cgybcmoB933
CmoCh19G004910	Carg22815	Silver-seed gourd	carcmoB0397

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh19G004910	Cucurbita moschata (Rifu)	cmocmoB395
CmoCh19G004910	Cucumber (Gy14) v1	cgycmoB0627
CmoCh19G004910	Cucurbita maxima (Rimu)	cmacmoB143
CmoCh19G004910	Cucurbita maxima (Rimu)	cmacmoB330
CmoCh19G004910	Wild cucumber (PI 183967)	cmocpiB525
CmoCh19G004910	Cucumber (Chinese Long) v2	cmocuB519
CmoCh19G004910	Melon (DHL92) v3.5.1	cmomeB454
CmoCh19G004910	Watermelon (Charleston Gray)	cmowcgB454
CmoCh19G004910	Watermelon (97103) v1	cmowmB478
CmoCh19G004910	Cucurbita pepo (Zucchini)	cmocpeB488
CmoCh19G004910	Cucurbita pepo (Zucchini)	cmocpeB494
CmoCh19G004910	Bottle gourd (USVL1VR-Ls)	cmolsiB467
CmoCh19G004910	Cucumber (Gy14) v2	cgybcmoB928
CmoCh19G004910	Melon (DHL92) v3.6.1	cmomedB523
CmoCh19G004910	Silver-seed gourd	carcmoB0513
CmoCh19G004910	Cucumber (Chinese Long) v3	cmocucB0623
CmoCh19G004910	Watermelon (97103) v2	cmowmbB505
CmoCh19G004910	Watermelon (97103) v2	cmowmbB531
CmoCh19G004910	Wax gourd	cmowgoB0635
CmoCh19G004910	Cucurbita moschata (Rifu)	cmocmoB110