MELO3C018581.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C018581.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Cysteine proteinase inhibitor
Location	chr01 : 1235131 .. 1235899 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAAGTACAACCCCAAAATTAATTAATTATTTACACACATAAAACTAGCTAAGGTCATCCAAATGAGTTCTTTGCCAAGTGGTTGTTCCAAAAAGTGGATTAAATTGCCTAGTGTTTTGATTCCTTGTTTGCAAGCCATTGCAGAGCATGGAGTAGAAGAGTTCAAGAAAAAATATGACGTGAGCCTGATATACAAGAATGTTGTTGAAGGTTGGTATCAGGAGTTGGATGATCATGGAAATACTATAAGGTACCGTCTTCATGTTCAAGCATACGACTGTCTTAGACGTCTACTCAAATTTGAAGCTATTTTGCTCCAACAACATGCTCAGAATAACGAAGAATCTACCATCACTCTTGAGTCTTTTGATCGGATAATTTCCTACCTCTAAGACAAAGTAACTATAATAATATATATCAAACTTTCCTTTCCCTTTTGGTCTTGTGTTCTTCCTCCTTCTGGTTTGTTTTGTACTGTCTTTTTGCTATCTATATATTTGTTATATTTGAATAATCATATGCAGTAATTGATGAGTCAATGGCACGAGTTTTTTGTATTAGGTTTGAAGCTTTTCAGGCAAGTTTTGTTTCTCTTTCTTCTAAAATCGCTCTAACACGTTTCTATTGTGGATCAAGTAAGGTGTCGTTTTGTGCAGACGACTTTTAGGGTTTCTTGGTTTGTTGAGTTTTGAGGGTGGTTGTAAGGATTGAGGACTTAGATTGTTTGGTTGTTGGTGTTAGATTAATAGTTTTAATTTATATATGAAG

mRNA sequence

GTGAAGTACAACCCCAAAATTAATTAATTATTTACACACATAAAACTAGCTAAGGTCATCCAAATGAGTTCTTTGCCAAGTGGTTGTTCCAAAAAGTGGATTAAATTGCCTAGTGTTTTGATTCCTTGTTTGCAAGCCATTGCAGAGCATGGAGTAGAAGAGTTCAAGAAAAAATATGACGTGAGCCTGATATACAAGAATGTTGTTGAAGGTTGGTATCAGGAGTTGGATGATCATGGAAATACTATAAGGTACCGTCTTCATGTTCAAGCATACGACTGTCTTAGACGTCTACTCAAATTTGAAGCTATTTTGCTCCAACAACATGCTCAGAATAACGAAGAATCTACCATCACTCTTGAGTCTTTTGATCGGATAATTTCCTACCTCTAAGACAAAGTAACTATAATAATATATATCAAACTTTCCTTTCCCTTTTGGTCTTGTGTTCTTCCTCCTTCTGGTTTGTTTTGTACTGTCTTTTTGCTATCTATATATTTGTTATATTTGAATAATCATATGCAGTAATTGATGAGTCAATGGCACGAGTTTTTTGTATTAGGTTTGAAGCTTTTCAGGCAAGTTTTGTTTCTCTTTCTTCTAAAATCGCTCTAACACGTTTCTATTGTGGATCAAGTAAGGTGTCGTTTTGTGCAGACGACTTTTAGGGTTTCTTGGTTTGTTGAGTTTTGAGGGTGGTTGTAAGGATTGAGGACTTAGATTGTTTGGTTGTTGGTGTTAGATTAATAGTTTTAATTTATATATGAAG

Coding sequence (CDS)

ATGAGTTCTTTGCCAAGTGGTTGTTCCAAAAAGTGGATTAAATTGCCTAGTGTTTTGATTCCTTGTTTGCAAGCCATTGCAGAGCATGGAGTAGAAGAGTTCAAGAAAAAATATGACGTGAGCCTGATATACAAGAATGTTGTTGAAGGTTGGTATCAGGAGTTGGATGATCATGGAAATACTATAAGGTACCGTCTTCATGTTCAAGCATACGACTGTCTTAGACGTCTACTCAAATTTGAAGCTATTTTGCTCCAACAACATGCTCAGAATAACGAAGAATCTACCATCACTCTTGAGTCTTTTGATCGGATAATTTCCTACCTCTAA

Protein sequence

MSSLPSGCSKKWIKLPSVLIPCLQAIAEHGVEEFKKKYDVSLIYKNVVEGWYQELDDHGNTIRYRLHVQAYDCLRRLLKFEAILLQQHAQNNEESTITLESFDRIISYL

Homology

[Close]

BLAST of MELO3C018581.2 vs. NCBI nr
Match: ADN34265.1 (phloem filament protein [Cucumis melo subsp. melo])

HSP 1 Score: 225.7 bits (574), Expect = 7.6e-56
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MSSLPSGCSKKWIKLPSVLIPCLQAIAEHGVEEFKKKYDVSLIYKNVVEGWYQELDDHGN 60
           MSSLPSGCSKKWIKLPSVLIPCLQAIAEHGVEEFKKKYDVSLIYKNVVEGWYQELDDHGN
Sbjct: 1   MSSLPSGCSKKWIKLPSVLIPCLQAIAEHGVEEFKKKYDVSLIYKNVVEGWYQELDDHGN 60

Query: 61  TIRYRLHVQAYDCLRRLLKFEAILLQQHAQNNEESTITLESFDRIISYL 110
           TIRYRLHVQAYDCLRRLLKFEAILLQQHAQNNEESTITLESFDRIISYL
Sbjct: 61  TIRYRLHVQAYDCLRRLLKFEAILLQQHAQNNEESTITLESFDRIISYL 109

[Close]

BLAST of MELO3C018581.2 vs. NCBI nr
Match: KGN43779.1 (Phloem filament protein [Cucumis sativus])

HSP 1 Score: 206.5 bits (524), Expect = 4.7e-50
Identity = 95/109 (87.16%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 1   MSSLPSGCSKKWIKLPSVLIPCLQAIAEHGVEEFKKKYDVSLIYKNVVEGWYQELDDHGN 60
           MSSLPS CSK+WIK P+VLIPCLQAIAEHG+EEFKKK++VSLIYKNVVEGWY+ELDDHGN
Sbjct: 1   MSSLPSICSKRWIKFPNVLIPCLQAIAEHGIEEFKKKHEVSLIYKNVVEGWYKELDDHGN 60

Query: 61  TIRYRLHVQAYDCLRRLLKFEAILLQQHAQNNEESTITLESFDRIISYL 110
           TIRYRLH+QAYDC+RRLLKFEA+LLQQHAQNNE+STITLESF++IISYL
Sbjct: 61  TIRYRLHIQAYDCIRRLLKFEAVLLQQHAQNNEKSTITLESFEQIISYL 109

[Close]

BLAST of MELO3C018581.2 vs. NCBI nr
Match: XP_022927699.1 (uncharacterized protein LOC111434517 [Cucurbita moschata])

HSP 1 Score: 79.7 bits (195), Expect = 6.7e-12
Identity = 36/82 (43.90%), Postives = 55/82 (67.07%), Query Frame = 0


Query: 10  KKWIKLPSVLIPCLQAIAEHGVEEFKKKYDVSLIYKNVVEGWYQELDDHGNTIRYRLHVQ 69
           +KWI++PSV  PC+Q +AE  V+EF +KY   L + +V EGWY EL    N+++YRLH++
Sbjct: 218 EKWIQIPSVKEPCVQVVAEFAVDEFNRKYGNILKFNSVYEGWYWELSP--NSLKYRLHIK 277

Query: 70  AYDCLRRLLKFEAILLQQHAQN 92
           A D L R L +E ++ +   Q+
Sbjct: 278 AIDFLERCLNYEFVVFEVKYQS 297

[Close]

BLAST of MELO3C018581.2 vs. NCBI nr
Match: XP_023530188.1 (uncharacterized protein LOC111792827 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-11
Identity = 40/98 (40.82%), Postives = 62/98 (63.27%), Query Frame = 0


Query: 10  KKWIKLPSVLIPCLQAIAEHGVEEFKKKYDVSLIYKNVVEGWYQELDDHGNTIRYRLHVQ 69
           +KWI++PSV  PC+Q +A+  V+EF +KY   L + +V EGWY EL    N+++YRLH++
Sbjct: 218 EKWIQIPSVKEPCVQVVAKFAVDEFNRKYGNILKFDSVYEGWYWELSP--NSLKYRLHIK 277

Query: 70  AYDCLRRLLKFEAILLQQHAQNNEESTITLESFDRIIS 108
           A D L R L +E ++ +   + + E    LES   I+S
Sbjct: 278 AIDFLDRCLNYEFVMFE--VKYHSERVRKLESVVIIVS 311

[Close]

BLAST of MELO3C018581.2 vs. NCBI nr
Match: XP_022927698.1 (uncharacterized protein LOC111434515 [Cucurbita moschata])

HSP 1 Score: 70.1 bits (170), Expect = 5.3e-09
Identity = 32/84 (38.10%), Postives = 53/84 (63.10%), Query Frame = 0


Query: 5   PSGCSKKWIKLPSVLIPCLQAIAEHGVEEFKKKYDVSLIYKNVVEGWYQELDDHGNTIRY 64
           P+   KKWIK+P+V +P +Q +A+  V+E   K    L Y  V +GW+ +L    + I++
Sbjct: 313 PAPQEKKWIKIPNVQVPLVQELAKFAVDEHNNKSGEGLKYVEVYDGWFMDLGQ--DNIKF 372

Query: 65  RLHVQAYDCLRRLLKFEAILLQQH 89
           RLH++A D L R+  +EA++L +H
Sbjct: 373 RLHLKAKDWLGRIRSYEAVVLVEH 394

[Close]

BLAST of MELO3C018581.2 vs. TrEMBL
Match: tr|E5GCR7|E5GCR7_CUCME (Phloem filament protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 5.0e-56
Identity = 109/109 (100.00%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MSSLPSGCSKKWIKLPSVLIPCLQAIAEHGVEEFKKKYDVSLIYKNVVEGWYQELDDHGN 60
           MSSLPSGCSKKWIKLPSVLIPCLQAIAEHGVEEFKKKYDVSLIYKNVVEGWYQELDDHGN
Sbjct: 1   MSSLPSGCSKKWIKLPSVLIPCLQAIAEHGVEEFKKKYDVSLIYKNVVEGWYQELDDHGN 60

Query: 61  TIRYRLHVQAYDCLRRLLKFEAILLQQHAQNNEESTITLESFDRIISYL 110
           TIRYRLHVQAYDCLRRLLKFEAILLQQHAQNNEESTITLESFDRIISYL
Sbjct: 61  TIRYRLHVQAYDCLRRLLKFEAILLQQHAQNNEESTITLESFDRIISYL 109

[Close]

BLAST of MELO3C018581.2 vs. TrEMBL
Match: tr|A0A0A0K471|A0A0A0K471_CUCSA (Phloem filament protein OS=Cucumis sativus OX=3659 GN=Csa_7G067340 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.1e-50
Identity = 95/109 (87.16%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 1   MSSLPSGCSKKWIKLPSVLIPCLQAIAEHGVEEFKKKYDVSLIYKNVVEGWYQELDDHGN 60
           MSSLPS CSK+WIK P+VLIPCLQAIAEHG+EEFKKK++VSLIYKNVVEGWY+ELDDHGN
Sbjct: 1   MSSLPSICSKRWIKFPNVLIPCLQAIAEHGIEEFKKKHEVSLIYKNVVEGWYKELDDHGN 60

Query: 61  TIRYRLHVQAYDCLRRLLKFEAILLQQHAQNNEESTITLESFDRIISYL 110
           TIRYRLH+QAYDC+RRLLKFEA+LLQQHAQNNE+STITLESF++IISYL
Sbjct: 61  TIRYRLHIQAYDCIRRLLKFEAVLLQQHAQNNEKSTITLESFEQIISYL 109

[Close]

BLAST of MELO3C018581.2 vs. TrEMBL
Match: tr|P94012|P94012_CUCMA (Cysteine proteinase inhibitor OS=Cucurbita maxima OX=3661 GN=PP1 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.0e-09
Identity = 36/84 (42.86%), Postives = 54/84 (64.29%), Query Frame = 0


Query: 5   PSGCSKKWIKLPSVLIPCLQAIAEHGVEEFKKKYDVSLIYKNVVEGWYQELDDHGNTIRY 64
           P    KKWIK+P+V +P +Q +A+  V+E  K  D  L Y  V EGW+ +L  H N I++
Sbjct: 313 PEPQEKKWIKIPNVQVPLVQELAKFAVDEHNKNGD-GLKYIEVYEGWFMDL-GHDN-IKF 372

Query: 65  RLHVQAYDCLRRLLKFEAILLQQH 89
           RLH++A D L R+  +EA++L +H
Sbjct: 373 RLHLKAKDWLGRIRNYEAVVLVEH 393

[Close]

BLAST of MELO3C018581.2 vs. TrEMBL
Match: tr|Q7DMD5|Q7DMD5_CUCMA (Cysteine proteinase inhibitor (Fragment) OS=Cucurbita maxima OX=3661 GN=cPC7 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.0e-09
Identity = 36/84 (42.86%), Postives = 54/84 (64.29%), Query Frame = 0


Query: 5   PSGCSKKWIKLPSVLIPCLQAIAEHGVEEFKKKYDVSLIYKNVVEGWYQELDDHGNTIRY 64
           P    KKWIK+P+V +P +Q +A+  V+E  K  D  L Y  V EGW+ +L  H N I++
Sbjct: 120 PEPQEKKWIKIPNVQVPLVQELAKFAVDEHNKNGD-GLKYIEVYEGWFMDL-GHDN-IKF 179

Query: 65  RLHVQAYDCLRRLLKFEAILLQQH 89
           RLH++A D L R+  +EA++L +H
Sbjct: 180 RLHLKAKDWLGRIRNYEAVVLVEH 200

[Close]

BLAST of MELO3C018581.2 vs. TrEMBL
Match: tr|A0A0A0K3W6|A0A0A0K3W6_CUCSA (Cysteine proteinase inhibitor OS=Cucumis sativus OX=3659 GN=Csa_7G222880 PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.6e-07
Identity = 33/93 (35.48%), Postives = 52/93 (55.91%), Query Frame = 0


Query: 10  KKWIKLPSVLIPCLQAIAEHGVEEFKKKYDVSLIYKNVVEGWYQELDDHGNTIRYRLHVQ 69
           K WIK+P    PC+  +A+ GV +  K    SL+YK V+ GW+ E+DDH   I++RL ++
Sbjct: 7   KTWIKIPDCTTPCVNEVAKDGVNQHNKASGDSLVYKRVIVGWFWEIDDH--AIKHRLIIE 66

Query: 70  AYDCLRRLLKFEAILLQQHAQNNEESTITLESF 103
                  +L +E I++    Q + +   TL SF
Sbjct: 67  VVTSKGVVLIYELIIVV--VQKDGKRVRTLISF 95

The following BLAST results are available for this feature:

BLAST of MELO3C018581.2 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN34265.1	7.6e-56	100.00	phloem filament protein [Cucumis melo subsp. melo]	[more]
KGN43779.1	4.7e-50	87.16	Phloem filament protein [Cucumis sativus]	[more]
XP_022927699.1	6.7e-12	43.90	uncharacterized protein LOC111434517 [Cucurbita moschata]	[more]
XP_023530188.1	1.1e-11	40.82	uncharacterized protein LOC111792827 [Cucurbita pepo subsp. pepo]	[more]
XP_022927698.1	5.3e-09	38.10	uncharacterized protein LOC111434515 [Cucurbita moschata]	[more]

BLAST of MELO3C018581.2 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of MELO3C018581.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C018581.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E5GCR7\|E5GCR7_CUCME	5.0e-56	100.00	Phloem filament protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
tr\|A0A0A0K471\|A0A0A0K471_CUCSA	3.1e-50	87.16	Phloem filament protein OS=Cucumis sativus OX=3659 GN=Csa_7G067340 PE=4 SV=1	[more]
tr\|P94012\|P94012_CUCMA	6.0e-09	42.86	Cysteine proteinase inhibitor OS=Cucurbita maxima OX=3661 GN=PP1 PE=3 SV=1	[more]
tr\|Q7DMD5\|Q7DMD5_CUCMA	6.0e-09	42.86	Cysteine proteinase inhibitor (Fragment) OS=Cucurbita maxima OX=3661 GN=cPC7 PE=...	[more]
tr\|A0A0A0K3W6\|A0A0A0K3W6_CUCSA	5.6e-07	35.48	Cysteine proteinase inhibitor OS=Cucumis sativus OX=3659 GN=Csa_7G222880 PE=3 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009994	PP1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010951	negative regulation of endopeptidase activity
biological_process	GO:0010466	negative regulation of peptidase activity
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004869	cysteine-type endopeptidase inhibitor activity
molecular_function	GO:0030414	peptidase inhibitor activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C018581.2.1	MELO3C018581.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.10.450.10		coord: 17..107 e-value: 2.4E-7 score: 32.6
None	No IPR available	SUPERFAMILY	SSF54403	Cystatin/monellin	coord: 20..94
IPR009994	Phloem filament PP1	PFAM	PF07430	PP1	coord: 21..91 e-value: 1.1E-17 score: 63.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C018581.2	Csa7G067340	Cucumber (Chinese Long) v2	cumedB509
MELO3C018581.2	CSPI07G06150	Wild cucumber (PI 183967)	cpimedB523
MELO3C018581.2	CsGy7G005810	Cucumber (Gy14) v2	cgybmedB465

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C018581.2	Cucumber (Gy14) v1	cgymedB377
MELO3C018581.2	Cucurbita maxima (Rimu)	cmamedB106
MELO3C018581.2	Cucurbita maxima (Rimu)	cmamedB331
MELO3C018581.2	Cucurbita maxima (Rimu)	cmamedB535
MELO3C018581.2	Cucurbita maxima (Rimu)	cmamedB754
MELO3C018581.2	Cucurbita moschata (Rifu)	cmomedB091
MELO3C018581.2	Cucurbita moschata (Rifu)	cmomedB317
MELO3C018581.2	Cucurbita moschata (Rifu)	cmomedB523
MELO3C018581.2	Cucurbita moschata (Rifu)	cmomedB751
MELO3C018581.2	Cucurbita pepo (Zucchini)	cpemedB220
MELO3C018581.2	Cucurbita pepo (Zucchini)	cpemedB263
MELO3C018581.2	Cucurbita pepo (Zucchini)	cpemedB457
MELO3C018581.2	Cucurbita pepo (Zucchini)	cpemedB715
MELO3C018581.2	Wild cucumber (PI 183967)	cpimedB267
MELO3C018581.2	Melon (DHL92) v3.6.1	medmedB094
MELO3C018581.2	Bottle gourd (USVL1VR-Ls)	lsimedB260
MELO3C018581.2	Bottle gourd (USVL1VR-Ls)	lsimedB265
MELO3C018581.2	Watermelon (Charleston Gray)	medwcgB171
MELO3C018581.2	Watermelon (Charleston Gray)	medwcgB184
MELO3C018581.2	Watermelon (97103) v1	medwmB202
MELO3C018581.2	Watermelon (97103) v1	medwmB214
MELO3C018581.2	Silver-seed gourd	carmedB0300
MELO3C018581.2	Silver-seed gourd	carmedB0306
MELO3C018581.2	Silver-seed gourd	carmedB0383
MELO3C018581.2	Silver-seed gourd	carmedB0737
MELO3C018581.2	Cucumber (Chinese Long) v3	cucmedB536
MELO3C018581.2	Watermelon (97103) v2	medwmbB160
MELO3C018581.2	Watermelon (97103) v2	medwmbB209
MELO3C018581.2	Wax gourd	medwgoB200
MELO3C018581.2	Wax gourd	medwgoB220