MELO3C018036 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C018036
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
Description30S ribosomal protein S8
Locationchr7 : 26590955 .. 26591570 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGGTCATACCTTTTGCACTTCGGAAGTTCAAACAACAATACCACTTCTAAGGGAAGTATATGATGATAGCATGACCAAAGTGTTGTATGTTGGCCCTGATACTTGTTCGATGATATCCAAATTACTCATAGACGACGAAGATGATTATGAAGCTTGGGGTTTGGAACCATATGGCTCTGATTCTAGTTACTTCAATTGCTGGGATCTCATCCATAAAGGCATCATCCGTGTTGCCGATGTTAAATTTGCTCTGCCTTATGGAGAAAATTCATTTTCTCATGTTATAATTTCAGATACTTTGGAATATTTCTCTTCACGATACCTAAACAGCACAATTTTTGAGTTGATGAGGGTGTCTAGAGAGGGTGTTATCATTTTTGCTGGTAAACCCCTTATTTTAGTTTCTTTTTTTTAGAGATCCAAAACACTTGTAGTTAGAGTTCATTATTACATAATTTTCTATCATTTTAATCCCAAACTATGTTATCCTTATCATTTTTCCTTTTTTTCAATGTTATGCAGGTTATCCAGATTATCCAATTTCAGAATTCACCAGATTTAAATTTGACCGTCAGGTTAGAATTATGGAATTGGATGAGTGTGTCGTTTAA

mRNA sequence

ATGGCAGGTCATACCTTTTGCACTTCGGAAGTTCAAACAACAATACCACTTCTAAGGGAAGTATATGATGATAGCATGACCAAAGTGTTGTATGTTGGCCCTGATACTTGTTCGATGATATCCAAATTACTCATAGACGACGAAGATGATTATGAAGCTTGGGGTTTGGAACCATATGGCTCTGATTCTAGTTACTTCAATTGCTGGGATCTCATCCATAAAGGCATCATCCGTGTTGCCGATGTTAAATTTGCTCTGCCTTATGGAGAAAATTCATTTTCTCATGTTATAATTTCAGATACTTTGGAATATTTCTCTTCACGATACCTAAACAGCACAATTTTTGAGTTGATGAGGGTGTCTAGAGAGGGTGTTATCATTTTTGCTGGTTATCCAGATTATCCAATTTCAGAATTCACCAGATTTAAATTTGACCGTCAGGTTAGAATTATGGAATTGGATGAGTGTGTCGTTTAA

Coding sequence (CDS)

ATGGCAGGTCATACCTTTTGCACTTCGGAAGTTCAAACAACAATACCACTTCTAAGGGAAGTATATGATGATAGCATGACCAAAGTGTTGTATGTTGGCCCTGATACTTGTTCGATGATATCCAAATTACTCATAGACGACGAAGATGATTATGAAGCTTGGGGTTTGGAACCATATGGCTCTGATTCTAGTTACTTCAATTGCTGGGATCTCATCCATAAAGGCATCATCCGTGTTGCCGATGTTAAATTTGCTCTGCCTTATGGAGAAAATTCATTTTCTCATGTTATAATTTCAGATACTTTGGAATATTTCTCTTCACGATACCTAAACAGCACAATTTTTGAGTTGATGAGGGTGTCTAGAGAGGGTGTTATCATTTTTGCTGGTTATCCAGATTATCCAATTTCAGAATTCACCAGATTTAAATTTGACCGTCAGGTTAGAATTATGGAATTGGATGAGTGTGTCGTTTAA

Protein sequence

MAGHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAWGLEPYGSDSSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTIFELMRVSREGVIIFAGYPDYPISEFTRFKFDRQVRIMELDECVV*
Homology
[Close]
BLAST of MELO3C018036 vs. Swiss-Prot
Match: Y3972_ARATH (Uncharacterized protein At3g49720 OS=Arabidopsis thaliana GN=At3g49720 PE=2 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.2e-34
Identity = 71/145 (48.97%), Postives = 99/145 (68.28%), Query Frame = 1 

Query: 1   MAGHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAWGLEPYG 60
           + G   CT+EVQ  IP+L++ Y D M KVL+VGPDTCS++S LL   E++ EAWG+EPY 
Sbjct: 66  VTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLL--KEEETEAWGVEPYD 125

Query: 61  SDSSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTIFELMRV 120
            + +  +C   + KG++RVAD+KF LPY   SFS VI+SD L+Y S +YLN T+ EL RV
Sbjct: 126 IEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPELARV 185

Query: 121 SREGVIIFAGYPDY---PISEFTRF 143
           + +GV++FAG P      ++E ++F
Sbjct: 186 ASDGVVLFAGLPGQQRAKVAELSKF 208

[Close]
BLAST of MELO3C018036 vs. TrEMBL
Match: A0A0A0L156_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G179070 PE=4 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 2.3e-64
Identity = 126/152 (82.89%), Postives = 135/152 (88.82%), Query Frame = 1 

Query: 1   MAGHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAWGLEPYG 60
           MAGHTFCTSEVQTTIPLLREVYDD+MTKVLYVGPDTCSMISKLLI DEDDYEAWG+EPY 
Sbjct: 1   MAGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAWGVEPYD 60

Query: 61  SDSSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTIFELMRV 120
            DSSYF+CWDLIHKGIIRVADVKF LPY +NSFSHVIISDTLEYFSSRYLNSTIFELMRV
Sbjct: 61  FDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTIFELMRV 120

Query: 121 SREGVIIFAGYPDYPISEFTRFKFDRQVRIME 153
           SREGVIIFAG P   +S +   K    +RI++
Sbjct: 121 SREGVIIFAGKPLILVSFYRYPKHLEVIRIIQ 152

[Close]
BLAST of MELO3C018036 vs. TrEMBL
Match: W1PJ17_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00155p00007590 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.3e-38
Identity = 82/148 (55.41%), Postives = 105/148 (70.95%), Query Frame = 1 

Query: 3   GHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAWGLEPYGSD 62
           G T CTSEV   IPLLR+VY +SM KVL+VGPDTC+++S LL   E+D EAWG+EPY  +
Sbjct: 69  GDTSCTSEVLRAIPLLRKVYGESMRKVLHVGPDTCAVVSNLL--KEEDIEAWGVEPYDLE 128

Query: 63  SSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTIFELMRVSR 122
            S  NC +L+ KGI+RVAD+KF LPY E SFS VI+SD L+Y S +YLN T+ EL RVS 
Sbjct: 129 DSNDNCKNLVRKGIVRVADIKFNLPYKEKSFSLVIVSDALDYLSPKYLNKTLPELARVSE 188

Query: 123 EGVIIFAGYPDYPISEFTRFKFDRQVRI 151
           +G+++FAGYP          KF R  ++
Sbjct: 189 DGLVLFAGYPGQRAKGAELSKFGRPAKL 214

[Close]
BLAST of MELO3C018036 vs. TrEMBL
Match: W1NFD3_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00137p00066590 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.1e-37
Identity = 77/130 (59.23%), Postives = 100/130 (76.92%), Query Frame = 1 

Query: 3   GHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAWGLEPYGSD 62
           G T CT+EV   IPL+R+VY +SM KVL+VGPDTC+++SKLL   EDD EAWG+EPY  +
Sbjct: 69  GDTSCTAEVLRAIPLMRKVYGESMRKVLHVGPDTCAVVSKLL--KEDDLEAWGVEPYDLE 128

Query: 63  SSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTIFELMRVSR 122
            +  NC  L+ KGI+R+AD+KF LPY E SFS VI+SD L+Y S +YLN T+ EL RVS 
Sbjct: 129 DANDNCKSLVRKGIVRLADIKFNLPYKEKSFSLVIVSDALDYLSPKYLNKTLPELARVSE 188

Query: 123 EGVIIFAGYP 133
           +G+++FAGYP
Sbjct: 189 DGLVLFAGYP 196

[Close]
BLAST of MELO3C018036 vs. TrEMBL
Match: W9S1Q6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002205 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 4.1e-37
Identity = 79/143 (55.24%), Postives = 106/143 (74.13%), Query Frame = 1 

Query: 3   GHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAWGLEPYGSD 62
           G   CT EVQT IP+L++VY DSM KVL+VGPDTCS++SKLL   E+D EAWG+EPY  +
Sbjct: 68  GGVSCTYEVQTAIPVLKKVYGDSMHKVLHVGPDTCSVVSKLL--KEEDTEAWGVEPYDLE 127

Query: 63  SSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTIFELMRVSR 122
            +  NC  L+ KG++R+AD+KF+LPY   SFS V++SD L+Y S +YLN T+ EL RVS 
Sbjct: 128 DADTNCKSLVRKGLVRMADIKFSLPYRAKSFSLVVVSDALDYLSPKYLNKTLPELARVST 187

Query: 123 EGVIIFAGYPDY---PISEFTRF 143
           +GV+IFAGYP      ++E ++F
Sbjct: 188 DGVVIFAGYPGQNRAKVAELSKF 208

[Close]
BLAST of MELO3C018036 vs. TrEMBL
Match: A0A0A0K2U6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070220 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.6e-36
Identity = 79/130 (60.77%), Postives = 97/130 (74.62%), Query Frame = 1 

Query: 3   GHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAWGLEPYGSD 62
           G T CT EVQ  IP+L++ Y DSM KVL+VGPDTCS++SKLL   E+D EAWG+EPY  D
Sbjct: 68  GSTSCTVEVQRAIPILKKAYGDSMHKVLHVGPDTCSVVSKLL--KEEDTEAWGVEPYDLD 127

Query: 63  SSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTIFELMRVSR 122
            +  +C  L+ KGI+R AD+KF LPY   SFS VI+SD L+Y S RYLN T+ EL RVS 
Sbjct: 128 DADASCKSLVRKGIVRAADIKFPLPYRAKSFSLVIVSDALDYLSPRYLNRTLPELARVSI 187

Query: 123 EGVIIFAGYP 133
           +GV+IFAGYP
Sbjct: 188 DGVVIFAGYP 195

[Close]
BLAST of MELO3C018036 vs. TAIR10
Match: AT5G65810.1 (AT5G65810.1 unknown protein)

HSP 1 Score: 153.3 bits (386), Expect = 1.3e-37
Identity = 72/132 (54.55%), Postives = 95/132 (71.97%), Query Frame = 1 

Query: 1   MAGHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAWGLEPYG 60
           + G   CT+EVQ  IP+L+  Y DSM KVL+VGP+TCS++S LL  +E++ EAWG+EPY 
Sbjct: 63  ITGDYSCTAEVQRAIPILKSAYGDSMRKVLHVGPETCSVVSSLL--NEEETEAWGVEPYD 122

Query: 61  SDSSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTIFELMRV 120
            + +  NC  L+HKG++RVAD+KF LPY   SFS VI+SD L+Y S RYLN T+ EL RV
Sbjct: 123 VEDADSNCKSLLHKGLVRVADIKFPLPYRSKSFSLVIVSDALDYLSPRYLNKTVPELARV 182

Query: 121 SREGVIIFAGYP 133
           + +GV++ AG P
Sbjct: 183 ASDGVVLLAGNP 192

[Close]
BLAST of MELO3C018036 vs. TAIR10
Match: AT3G49720.1 (AT3G49720.1 unknown protein)

HSP 1 Score: 147.5 bits (371), Expect = 6.9e-36
Identity = 71/145 (48.97%), Postives = 99/145 (68.28%), Query Frame = 1 

Query: 1   MAGHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAWGLEPYG 60
           + G   CT+EVQ  IP+L++ Y D M KVL+VGPDTCS++S LL   E++ EAWG+EPY 
Sbjct: 66  VTGDYSCTAEVQRAIPVLKKAYGDGMRKVLHVGPDTCSVVSSLL--KEEETEAWGVEPYD 125

Query: 61  SDSSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTIFELMRV 120
            + +  +C   + KG++RVAD+KF LPY   SFS VI+SD L+Y S +YLN T+ EL RV
Sbjct: 126 IEDADSHCKSFVSKGLVRVADIKFPLPYRAKSFSLVIVSDALDYLSPKYLNKTVPELARV 185

Query: 121 SREGVIIFAGYPDY---PISEFTRF 143
           + +GV++FAG P      ++E ++F
Sbjct: 186 ASDGVVLFAGLPGQQRAKVAELSKF 208

[Close]
BLAST of MELO3C018036 vs. NCBI nr
Match: gi|659109011|ref|XP_008454502.1| (PREDICTED: uncharacterized protein At3g49720-like [Cucumis melo])

HSP 1 Score: 303.9 bits (777), Expect = 1.6e-79
Identity = 145/148 (97.97%), Postives = 147/148 (99.32%), Query Frame = 1 

Query: 3   GHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAWGLEPYGSD 62
           GHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAWGLEPYGSD
Sbjct: 81  GHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAWGLEPYGSD 140

Query: 63  SSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTIFELMRVSR 122
           SSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTIFELMRVSR
Sbjct: 141 SSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTIFELMRVSR 200

Query: 123 EGVIIFAGYPDYPISEFTRFKFDRQVRI 151
           EGVIIFAGYPDYPISEFTRFKFDRQ ++
Sbjct: 201 EGVIIFAGYPDYPISEFTRFKFDRQAKL 228

[Close]
BLAST of MELO3C018036 vs. NCBI nr
Match: gi|778697583|ref|XP_011654354.1| (PREDICTED: uncharacterized protein At3g49720-like [Cucumis sativus])

HSP 1 Score: 277.7 bits (709), Expect = 1.3e-71
Identity = 131/148 (88.51%), Postives = 141/148 (95.27%), Query Frame = 1 

Query: 3   GHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAWGLEPYGSD 62
           GHTFCTSEVQTTIPLLREVYDD+MTKVLYVGPDTCSMISKLLI DEDDYEAWG+EPY  D
Sbjct: 81  GHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAWGVEPYDFD 140

Query: 63  SSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTIFELMRVSR 122
           SSYF+CWDLIHKGIIRVADVKF LPY +NSFSHVIISDTLEYFSSRYLNSTIFELMRVSR
Sbjct: 141 SSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTIFELMRVSR 200

Query: 123 EGVIIFAGYPDYPISEFTRFKFDRQVRI 151
           EGVIIFAG+PDYP+SEFTR+KFD + ++
Sbjct: 201 EGVIIFAGHPDYPVSEFTRYKFDHEAKL 228

[Close]
BLAST of MELO3C018036 vs. NCBI nr
Match: gi|700198713|gb|KGN53871.1| (hypothetical protein Csa_4G179070 [Cucumis sativus])

HSP 1 Score: 253.1 bits (645), Expect = 3.3e-64
Identity = 126/152 (82.89%), Postives = 135/152 (88.82%), Query Frame = 1 

Query: 1   MAGHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAWGLEPYG 60
           MAGHTFCTSEVQTTIPLLREVYDD+MTKVLYVGPDTCSMISKLLI DEDDYEAWG+EPY 
Sbjct: 1   MAGHTFCTSEVQTTIPLLREVYDDTMTKVLYVGPDTCSMISKLLIVDEDDYEAWGVEPYD 60

Query: 61  SDSSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTIFELMRV 120
            DSSYF+CWDLIHKGIIRVADVKF LPY +NSFSHVIISDTLEYFSSRYLNSTIFELMRV
Sbjct: 61  FDSSYFHCWDLIHKGIIRVADVKFDLPYEKNSFSHVIISDTLEYFSSRYLNSTIFELMRV 120

Query: 121 SREGVIIFAGYPDYPISEFTRFKFDRQVRIME 153
           SREGVIIFAG P   +S +   K    +RI++
Sbjct: 121 SREGVIIFAGKPLILVSFYRYPKHLEVIRIIQ 152

[Close]
BLAST of MELO3C018036 vs. NCBI nr
Match: gi|586706524|ref|XP_006845971.1| (PREDICTED: uncharacterized protein At3g49720 [Amborella trichopoda])

HSP 1 Score: 165.2 bits (417), Expect = 9.1e-38
Identity = 82/148 (55.41%), Postives = 105/148 (70.95%), Query Frame = 1 

Query: 3   GHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAWGLEPYGSD 62
           G T CTSEV   IPLLR+VY +SM KVL+VGPDTC+++S LL   E+D EAWG+EPY  +
Sbjct: 69  GDTSCTSEVLRAIPLLRKVYGESMRKVLHVGPDTCAVVSNLL--KEEDIEAWGVEPYDLE 128

Query: 63  SSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTIFELMRVSR 122
            S  NC +L+ KGI+RVAD+KF LPY E SFS VI+SD L+Y S +YLN T+ EL RVS 
Sbjct: 129 DSNDNCKNLVRKGIVRVADIKFNLPYKEKSFSLVIVSDALDYLSPKYLNKTLPELARVSE 188

Query: 123 EGVIIFAGYPDYPISEFTRFKFDRQVRI 151
           +G+++FAGYP          KF R  ++
Sbjct: 189 DGLVLFAGYPGQRAKGAELSKFGRPAKL 214

[Close]
BLAST of MELO3C018036 vs. NCBI nr
Match: gi|703133163|ref|XP_010105300.1| (hypothetical protein L484_002205 [Morus notabilis])

HSP 1 Score: 162.5 bits (410), Expect = 5.9e-37
Identity = 79/143 (55.24%), Postives = 106/143 (74.13%), Query Frame = 1 

Query: 3   GHTFCTSEVQTTIPLLREVYDDSMTKVLYVGPDTCSMISKLLIDDEDDYEAWGLEPYGSD 62
           G   CT EVQT IP+L++VY DSM KVL+VGPDTCS++SKLL   E+D EAWG+EPY  +
Sbjct: 68  GGVSCTYEVQTAIPVLKKVYGDSMHKVLHVGPDTCSVVSKLL--KEEDTEAWGVEPYDLE 127

Query: 63  SSYFNCWDLIHKGIIRVADVKFALPYGENSFSHVIISDTLEYFSSRYLNSTIFELMRVSR 122
            +  NC  L+ KG++R+AD+KF+LPY   SFS V++SD L+Y S +YLN T+ EL RVS 
Sbjct: 128 DADTNCKSLVRKGLVRMADIKFSLPYRAKSFSLVVVSDALDYLSPKYLNKTLPELARVST 187

Query: 123 EGVIIFAGYPDY---PISEFTRF 143
           +GV+IFAGYP      ++E ++F
Sbjct: 188 DGVVIFAGYPGQNRAKVAELSKF 208

The following BLAST results are available for this feature:
BLAST of MELO3C018036 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y3972_ARATH1.2e-3448.97Uncharacterized protein At3g49720 OS=Arabidopsis thaliana GN=At3g49720 PE=2 SV=1[more]
BLAST of MELO3C018036 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L156_CUCSA2.3e-6482.89Uncharacterized protein OS=Cucumis sativus GN=Csa_4G179070 PE=4 SV=1[more]
W1PJ17_AMBTC6.3e-3855.41Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00155p00007590 PE=4 SV=... [more]
W1NFD3_AMBTC4.1e-3759.23Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00137p00066590 PE=4 SV=... [more]
W9S1Q6_9ROSA4.1e-3755.24Uncharacterized protein OS=Morus notabilis GN=L484_002205 PE=4 SV=1[more]
A0A0A0K2U6_CUCSA1.6e-3660.77Uncharacterized protein OS=Cucumis sativus GN=Csa_7G070220 PE=4 SV=1[more]
BLAST of MELO3C018036 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G65810.11.3e-3754.55 unknown protein[more]
AT3G49720.16.9e-3648.97 unknown protein[more]
BLAST of MELO3C018036 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659109011|ref|XP_008454502.1|1.6e-7997.97PREDICTED: uncharacterized protein At3g49720-like [Cucumis melo][more]
gi|778697583|ref|XP_011654354.1|1.3e-7188.51PREDICTED: uncharacterized protein At3g49720-like [Cucumis sativus][more]
gi|700198713|gb|KGN53871.1|3.3e-6482.89hypothetical protein Csa_4G179070 [Cucumis sativus][more]
gi|586706524|ref|XP_006845971.1|9.1e-3855.41PREDICTED: uncharacterized protein At3g49720 [Amborella trichopoda][more]
gi|703133163|ref|XP_010105300.1|5.9e-3755.24hypothetical protein L484_002205 [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0010393 galacturonan metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0044431 Golgi apparatus part
cellular_component GO:0005794 Golgi apparatus
molecular_function GO:0003674 molecular_function
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C018036T1MELO3C018036T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34208FAMILY NOT NAMEDcoord: 7..132
score: 2.6
NoneNo IPR availablePANTHERPTHR34208:SF2SUBFAMILY NOT NAMEDcoord: 7..132
score: 2.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C018036Csa4G179070Cucumber (Chinese Long) v2cumeB302
MELO3C018036Cla006473Watermelon (97103) v1mewmB497
MELO3C018036ClCG10G009870Watermelon (Charleston Gray)mewcgB453
MELO3C018036ClCG02G007360Watermelon (Charleston Gray)mewcgB472
MELO3C018036Cla97C10G192890Watermelon (97103) v2mewmbB463
MELO3C018036Cla97C02G034140Watermelon (97103) v2mewmbB476
MELO3C018036Bhi11G000892Wax gourdmewgoB564
MELO3C018036Bhi05G000839Wax gourdmewgoB586
MELO3C018036CSPI07G06570Wild cucumber (PI 183967)cpimeB573
MELO3C018036CSPI04G11610Wild cucumber (PI 183967)cpimeB296
MELO3C018036Cucsa.332040Cucumber (Gy14) v1cgymeB542
MELO3C018036CmaCh04G004190Cucurbita maxima (Rimu)cmameB700
MELO3C018036CmoCh19G005310Cucurbita moschata (Rifu)cmomeB475
MELO3C018036CmoCh04G004510Cucurbita moschata (Rifu)cmomeB692
MELO3C018036Lsi03G006370Bottle gourd (USVL1VR-Ls)lsimeB268
MELO3C018036Cp4.1LG15g04050Cucurbita pepo (Zucchini)cpemeB242
MELO3C018036Cp4.1LG01g02980Cucurbita pepo (Zucchini)cpemeB422
MELO3C018036CsGy4G011100Cucumber (Gy14) v2cgybmeB257
MELO3C018036Carg08095Silver-seed gourdcarmeB0383
MELO3C018036CsaV3_4G014570Cucumber (Chinese Long) v3cucmeB302
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
MELO3C018036MELO3C018548Melon (DHL92) v3.5.1memeB094
The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C018036Cucurbita maxima (Rimu)cmameB303
MELO3C018036Cucurbita moschata (Rifu)cmomeB298
MELO3C018036Cucumber (Chinese Long) v2cumeB562
MELO3C018036Cucurbita pepo (Zucchini)cpemeB201
MELO3C018036Bottle gourd (USVL1VR-Ls)lsimeB269
MELO3C018036Cucumber (Gy14) v2cgybmeB502
MELO3C018036Silver-seed gourdcarmeB0297
MELO3C018036Cucumber (Chinese Long) v3cucmeB585
MELO3C018036Cucumber (Gy14) v1cgymeB383