MELO3C017892.2 (gene) Melon (DHL92) v3.6.1

Overview
NameMELO3C017892.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionUnknown protein
Locationchr07 : 27913052 .. 27913389 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAACACGCCAGAAAAGCTCATGGGTGATCATAGAGGACCTACTCTCCCTTATTTCTATAAGAAAATCCCACAAAATAGCGAATTGTCCACTGCTTCCCAAGATGTCAACGACAATATGATAGCTGTCGTCGCTGGGTTCAAAACCCGGAATTCGTTTAGCCCAGAGGAAGAACCTGTGAGCGGAGAAAGCAATATTCTTGCACCTTTTGAGAACTTGCTCGACGAGGTCAGTGGATACATTGGAGGAGAAGGAGGAGAGGCCAAGTTCCAAGTCATGGTGAGGGCTTCTACGGTCGCTGAGGATGCGAGATATCTCACTGACAAGAAATGGAAGTGA

mRNA sequence

AAAACACGCCAGAAAAGCTCATGGGTGATCATAGAGGACCTACTCTCCCTTATTTCTATAAGAAAATCCCACAAAATAGCGAATTGTCCACTGCTTCCCAAGATGTCAACGACAATATGATAGCTGTCGTCGCTGGGTTCAAAACCCGGAATTCGTTTAGCCCAGAGGAAGAACCTGTGAGCGGAGAAAGCAATATTCTTGCACCTTTTGAGAACTTGCTCGACGAGGTCAGTGGATACATTGGAGGAGAAGGAGGAGAGGCCAAGTTCCAAGTCATGGTGAGGGCTTCTACGGTCGCTGAGGATGCGAGATATCTCACTGACAAGAAATGGAAGTGA

Coding sequence (CDS)

ATGGGTGATCATAGAGGACCTACTCTCCCTTATTTCTATAAGAAAATCCCACAAAATAGCGAATTGTCCACTGCTTCCCAAGATGTCAACGACAATATGATAGCTGTCGTCGCTGGGTTCAAAACCCGGAATTCGTTTAGCCCAGAGGAAGAACCTGTGAGCGGAGAAAGCAATATTCTTGCACCTTTTGAGAACTTGCTCGACGAGGTCAGTGGATACATTGGAGGAGAAGGAGGAGAGGCCAAGTTCCAAGTCATGGTGAGGGCTTCTACGGTCGCTGAGGATGCGAGATATCTCACTGACAAGAAATGGAAGTGA

Protein sequence

MGDHRGPTLPYFYKKIPQNSELSTASQDVNDNMIAVVAGFKTRNSFSPEEEPVSGESNILAPFENLLDEVSGYIGGEGGEAKFQVMVRASTVAEDARYLTDKKWK
Homology
[Close]
BLAST of MELO3C017892.2 vs. NCBI nr
Match: KGN52882.1 (hypothetical protein Csa_4G004915 [Cucumis sativus])

HSP 1 Score: 206.5 bits (524), Expect = 4.6e-50
Identity = 100/105 (95.24%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 1   MGDHRGPTLPYFYKKIPQNSELSTASQDVNDNMIAVVAGFKTRNSFSPEEEPVSGESNIL 60
           MG+HRGP+LPYFYKKIPQNSELSTASQDVNDNMIAVVAGFKTRNSFSPEEEPVSGESNIL
Sbjct: 6   MGNHRGPSLPYFYKKIPQNSELSTASQDVNDNMIAVVAGFKTRNSFSPEEEPVSGESNIL 65

Query: 61  APFENLLDEVSGYIGGEGGEAKFQVMVRASTVAEDARYLTDKKWK 106
           APFENLLDEVSGYIGGEGGEA FQVMVR STVAEDARYLTD+KWK
Sbjct: 66  APFENLLDEVSGYIGGEGGEADFQVMVRISTVAEDARYLTDEKWK 110

[Close]
BLAST of MELO3C017892.2 vs. TrEMBL
Match: tr|A0A0A0KWS3|A0A0A0KWS3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004915 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.0e-50
Identity = 100/105 (95.24%), Postives = 103/105 (98.10%), Query Frame = 0 

Query: 1   MGDHRGPTLPYFYKKIPQNSELSTASQDVNDNMIAVVAGFKTRNSFSPEEEPVSGESNIL 60
           MG+HRGP+LPYFYKKIPQNSELSTASQDVNDNMIAVVAGFKTRNSFSPEEEPVSGESNIL
Sbjct: 6   MGNHRGPSLPYFYKKIPQNSELSTASQDVNDNMIAVVAGFKTRNSFSPEEEPVSGESNIL 65

Query: 61  APFENLLDEVSGYIGGEGGEAKFQVMVRASTVAEDARYLTDKKWK 106
           APFENLLDEVSGYIGGEGGEA FQVMVR STVAEDARYLTD+KWK
Sbjct: 66  APFENLLDEVSGYIGGEGGEADFQVMVRISTVAEDARYLTDEKWK 110

The following BLAST results are available for this feature:
BLAST of MELO3C017892.2 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN52882.14.6e-5095.24hypothetical protein Csa_4G004915 [Cucumis sativus][more]
BLAST of MELO3C017892.2 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of MELO3C017892.2 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of MELO3C017892.2 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KWS3|A0A0A0KWS3_CUCSA3.0e-5095.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G004915 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C017892.2.1MELO3C017892.2.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C017892.2CSPI04G01480Wild cucumber (PI 183967)cpimedB301
MELO3C017892.2Lsi07G004720Bottle gourd (USVL1VR-Ls)lsimedB465
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C017892.2Cucumber (Gy14) v2cgybmedB266
MELO3C017892.2Cucumber (Gy14) v2cgybmedB495
MELO3C017892.2Cucumber (Gy14) v1cgymedB109
MELO3C017892.2Cucumber (Gy14) v1cgymedB135
MELO3C017892.2Cucurbita maxima (Rimu)cmamedB083
MELO3C017892.2Cucurbita maxima (Rimu)cmamedB278
MELO3C017892.2Cucurbita maxima (Rimu)cmamedB511
MELO3C017892.2Cucurbita moschata (Rifu)cmomedB077
MELO3C017892.2Cucurbita moschata (Rifu)cmomedB264
MELO3C017892.2Cucurbita moschata (Rifu)cmomedB500
MELO3C017892.2Cucurbita pepo (Zucchini)cpemedB406
MELO3C017892.2Cucurbita pepo (Zucchini)cpemedB633
MELO3C017892.2Cucurbita pepo (Zucchini)cpemedB698
MELO3C017892.2Wild cucumber (PI 183967)cpimedB555
MELO3C017892.2Cucumber (Chinese Long) v2cumedB297
MELO3C017892.2Cucumber (Chinese Long) v2cumedB536
MELO3C017892.2Melon (DHL92) v3.6.1medmedB095
MELO3C017892.2Bottle gourd (USVL1VR-Ls)lsimedB234
MELO3C017892.2Bottle gourd (USVL1VR-Ls)lsimedB443
MELO3C017892.2Watermelon (Charleston Gray)medwcgB441
MELO3C017892.2Watermelon (Charleston Gray)medwcgB478
MELO3C017892.2Watermelon (Charleston Gray)medwcgB480
MELO3C017892.2Watermelon (Charleston Gray)medwcgB498
MELO3C017892.2Watermelon (97103) v1medwmB478
MELO3C017892.2Watermelon (97103) v1medwmB489
MELO3C017892.2Watermelon (97103) v1medwmB500
MELO3C017892.2Watermelon (97103) v1medwmB535
MELO3C017892.2Silver-seed gourdcarmedB0131
MELO3C017892.2Silver-seed gourdcarmedB0138
MELO3C017892.2Silver-seed gourdcarmedB0215
MELO3C017892.2Cucumber (Chinese Long) v3cucmedB307
MELO3C017892.2Cucumber (Chinese Long) v3cucmedB569
MELO3C017892.2Watermelon (97103) v2medwmbB481
MELO3C017892.2Watermelon (97103) v2medwmbB483
MELO3C017892.2Watermelon (97103) v2medwmbB503
MELO3C017892.2Wax gourdmedwgoB574
MELO3C017892.2Wax gourdmedwgoB607
MELO3C017892.2Wax gourdmedwgoB617