MELO3C017556 (gene) Melon (DHL92) v3.5.1

NameMELO3C017556
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionF-box family protein, putative isoform 2
Locationchr7 : 22892785 .. 22893473 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAATGAAGAATATGGGGAGATTTTGCTCCCTCTTGATCTCCCTTCTCCTCACTATGGAGCGTTAATGGAGATGAATGGAGAGTTGTGTTACGTTACGGTAATTACGAAGAATGACGACGATAAGGATGATGGTGATACTGGCGATGATGATGACTGTTATTATTGGTTAGGGGTGTATGGTGGTGGTGGCCATGAGATGGTGTTGAAGAGAAGAATTCCACTTCATGATGATAATGGGGTTCGTTTTGAGGGGGATGTTAGAGTTTTGTCAGGTTTAAGTGAAGGTGCAGTGATGATTCTTGTGGGGAACAATGTGATTCTTTATCATGTGGAAGAAAGGAAGGGGAAGTTTGTTGGAATAGTCGATTCGGCAGAGATTGCGGCGATTGATGTCGAGGATGGTGCCGTGCGGTTTTTGCCATATGTGAATAGTCTTGCGAGCGTGTGTCCGGTGGACGAAATGCCGCCGGAGGATCATGAGTTTGATAAGATCTCGAGAAAAATGAGCAGAAACAAGATTGTGTAAGGCTTTTTATTGGGTGTGATTGAGTTTCTTTCTTAGTTTCTTTTTCTGTTGTGTATAAAGAATTTGGATACATAGGAATGTCATAATGGGTGTTTGAAGGGTATTGAACTTCTACAATGGGTAAGTCACCCCATAATTCAAATAAGATGCTTTTTAGT

mRNA sequence

ATGACAAATGAAGAATATGGGGAGATTTTGCTCCCTCTTGATCTCCCTTCTCCTCACTATGGAGCGTTAATGGAGATGAATGGAGAGTTGTGTTACGTTACGGTAATTACGAAGAATGACGACGATAAGGATGATGGTGATACTGGCGATGATGATGACTGTTATTATTGGTTAGGGGTGTATGGTGGTGGTGGCCATGAGATGGTGTTGAAGAGAAGAATTCCACTTCATGATGATAATGGGGTTCGTTTTGAGGGGGATGTTAGAGTTTTGTCAGGTTTAAGTGAAGGTGCAGTGATGATTCTTGTGGGGAACAATGTGATTCTTTATCATGTGGAAGAAAGGAAGGGGAAGTTTGTTGGAATAGTCGATTCGGCAGAGATTGCGGCGATTGATGTCGAGGATGGTGCCGTGCGGTTTTTGCCATATGTGAATAGTCTTGCGAGCGTGTGTCCGGTGGACGAAATGCCGCCGGAGGATCATGAGTTTGATAAGATCTCGAGAAAAATGAGCAGAAACAAGATTGTGTAAGGCTTTTTATTGGGTGTGATTGAGTTTCTTTCTTAGTTTCTTTTTCTGTTGTGTATAAAGAATTTGGATACATAGGAATGTCATAATGGGTGTTTGAAGGGTATTGAACTTCTACAATGGGTAAGTCACCCCATAATTCAAATAAGATGCTTTTTAGT

Coding sequence (CDS)

ATGACAAATGAAGAATATGGGGAGATTTTGCTCCCTCTTGATCTCCCTTCTCCTCACTATGGAGCGTTAATGGAGATGAATGGAGAGTTGTGTTACGTTACGGTAATTACGAAGAATGACGACGATAAGGATGATGGTGATACTGGCGATGATGATGACTGTTATTATTGGTTAGGGGTGTATGGTGGTGGTGGCCATGAGATGGTGTTGAAGAGAAGAATTCCACTTCATGATGATAATGGGGTTCGTTTTGAGGGGGATGTTAGAGTTTTGTCAGGTTTAAGTGAAGGTGCAGTGATGATTCTTGTGGGGAACAATGTGATTCTTTATCATGTGGAAGAAAGGAAGGGGAAGTTTGTTGGAATAGTCGATTCGGCAGAGATTGCGGCGATTGATGTCGAGGATGGTGCCGTGCGGTTTTTGCCATATGTGAATAGTCTTGCGAGCGTGTGTCCGGTGGACGAAATGCCGCCGGAGGATCATGAGTTTGATAAGATCTCGAGAAAAATGAGCAGAAACAAGATTGTGTAA

Protein sequence

MTNEEYGEILLPLDLPSPHYGALMEMNGELCYVTVITKNDDDKDDGDTGDDDDCYYWLGVYGGGGHEMVLKRRIPLHDDNGVRFEGDVRVLSGLSEGAVMILVGNNVILYHVEERKGKFVGIVDSAEIAAIDVEDGAVRFLPYVNSLASVCPVDEMPPEDHEFDKISRKMSRNKIV*
BLAST of MELO3C017556 vs. TrEMBL
Match: A0A0A0KXX0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038740 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 1.4e-81
Identity = 152/175 (86.86%), Postives = 161/175 (92.00%), Query Frame = 1

Query: 1   MTNEEYGEILLPLDLPSPHYGALMEMNGELCYVTVITKNDDDKDDGDTGDDDDCYYWLGV 60
           +TNEEYGEILLPLDLPSPHYGALMEMNGELCYVTVITKN DD  D   GDDDDCYYWLGV
Sbjct: 224 LTNEEYGEILLPLDLPSPHYGALMEMNGELCYVTVITKNHDDGHDN--GDDDDCYYWLGV 283

Query: 61  YGGGGHEMVLKRRIPLHDDNGVRFEGDVRVLSGLSEGAVMILVGNNVILYHVEERKGKFV 120
           YGGGGH MVLK+RIPL+DDNG  FEGDVRVLSGLSEGAVMILVG+ VILYHVEERK +FV
Sbjct: 284 YGGGGHGMVLKKRIPLYDDNGFFFEGDVRVLSGLSEGAVMILVGSKVILYHVEERKRRFV 343

Query: 121 GIVDSAEIAAIDVEDGAVRFLPYVNSLASVCPVDEMPPEDHEFDKISRKMSRNKI 176
           GIV+ AEIAAIDV+DGAVRFLPYVNSLASVCPVDEMPPED+EFDKI +K SRNKI
Sbjct: 344 GIVEPAEIAAIDVDDGAVRFLPYVNSLASVCPVDEMPPEDYEFDKILKKKSRNKI 396

BLAST of MELO3C017556 vs. TrEMBL
Match: A0A061DFS9_THECC (F-box family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_000410 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.3e-09
Identity = 50/150 (33.33%), Postives = 68/150 (45.33%), Query Frame = 1

Query: 1   MTNEEYGEILLPLDLPSPHYGALMEMNGELCYVTVITKNDDDKDDGDTGDDDDCYYWLGV 60
           + NE+YG  +LPL L S  YGAL  M+GELCY+      D                   +
Sbjct: 262 LRNEQYG--ILPLPLSSREYGALTVMHGELCYILPCLIFDK----------------YNI 321

Query: 61  YGGGGHEMVLKRRIPLHDDNGVRFEGDVRVLSGLSEGAVMILVGNNVILYHVEERKGKFV 120
           Y  G  +M LK  +    D+     G  R L G ++  +M+++G  VI YHV E+K    
Sbjct: 322 YIYGNMDMRLKTVLQFTCDDVGSTYGVCRALPGANDDILMLVLGTRVIAYHVREQK---- 381

Query: 121 GIVDSAEIAAIDVEDGAVRFLPYVNSLASV 151
                 E+      D    +LPYVNSL SV
Sbjct: 382 -----LEVICTMTADSCTGYLPYVNSLVSV 384

BLAST of MELO3C017556 vs. TrEMBL
Match: A0A061DFU7_THECC (Acyl-CoA N-acyltransferases (NAT) superfamily protein, putative isoform 1 OS=Theobroma cacao GN=TCM_000410 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 5.3e-09
Identity = 50/150 (33.33%), Postives = 68/150 (45.33%), Query Frame = 1

Query: 1   MTNEEYGEILLPLDLPSPHYGALMEMNGELCYVTVITKNDDDKDDGDTGDDDDCYYWLGV 60
           + NE+YG  +LPL L S  YGAL  M+GELCY+      D                   +
Sbjct: 302 LRNEQYG--ILPLPLSSREYGALTVMHGELCYILPCLIFDK----------------YNI 361

Query: 61  YGGGGHEMVLKRRIPLHDDNGVRFEGDVRVLSGLSEGAVMILVGNNVILYHVEERKGKFV 120
           Y  G  +M LK  +    D+     G  R L G ++  +M+++G  VI YHV E+K    
Sbjct: 362 YIYGNMDMRLKTVLQFTCDDVGSTYGVCRALPGANDDILMLVLGTRVIAYHVREQK---- 421

Query: 121 GIVDSAEIAAIDVEDGAVRFLPYVNSLASV 151
                 E+      D    +LPYVNSL SV
Sbjct: 422 -----LEVICTMTADSCTGYLPYVNSLVSV 424

BLAST of MELO3C017556 vs. TrEMBL
Match: B9HEV7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s12670g PE=4 SV=2)

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-08
Identity = 55/151 (36.42%), Postives = 78/151 (51.66%), Query Frame = 1

Query: 4   EEYGEILLPLDLPSPH-YGALMEMNGELCYVTVITKNDDDKDDGDTGDDDDCYYWLGVYG 63
           EEYG + LP   PS +  GAL E+ GELCY+  +   +DD             + + VYG
Sbjct: 274 EEYGILSLP---PSSNPTGALTELRGELCYL--LPHKEDDA------------WSIEVYG 333

Query: 64  GGGHEMVLKRRIPLHDDN-GVRFEGDVRVLSGLSEGAVMILVGNNVILYHVEERKGKFVG 123
               +M L+R IPLH +  G   +G  R L+ +++  ++I +G  VI YHV   K + V 
Sbjct: 334 N--MDMSLRRVIPLHSEVLGHLVDGQCRALAFVNDDTMIIALGMKVIAYHVRAHKMERVS 393

Query: 124 IVDSAEIAAIDVEDGAVRFLPYVNSLASVCP 153
              +         DG V++LPYVNSLA V P
Sbjct: 394 DART---------DGFVKYLPYVNSLAPVGP 396

BLAST of MELO3C017556 vs. TrEMBL
Match: A0A067GW25_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015428mg PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.3e-07
Identity = 53/151 (35.10%), Postives = 79/151 (52.32%), Query Frame = 1

Query: 1   MTNEEYGEILLPLDLPSPHYGALMEMNGELCYVTVITKNDDDKDDGDTGDDDDCYYWLGV 60
           + +E+YG  +LPL   S  YGAL +M+GELCY+    +            D +C   +GV
Sbjct: 283 LKDEQYG--ILPLPARSGPYGALTQMHGELCYMLPQIQ------------DGECL--IGV 342

Query: 61  YGGGGHEMVLKRRIPL-HDDNGVRFEGDVRVLSGLSEGAVMILVGNNVILYHVEERKGKF 120
           Y  G  +M LK  IP+ H+  G  F  D RVL+ ++   ++IL+ N VI YHV+ +K + 
Sbjct: 343 Y--GNLDMSLKCVIPVEHEVLGETF-SDCRVLTCVNSDILIILLPNKVIAYHVKAQKMQV 402

Query: 121 VGIVDSAEIAAIDVEDGAVRFLPYVNSLASV 151
           V    +         +G    LPY+NSL +V
Sbjct: 403 VSETGT---------EGFQNCLPYINSLVAV 405

BLAST of MELO3C017556 vs. NCBI nr
Match: gi|659107551|ref|XP_008453733.1| (PREDICTED: F-box protein At5g49610-like [Cucumis melo])

HSP 1 Score: 365.2 bits (936), Expect = 6.7e-98
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 1

Query: 1   MTNEEYGEILLPLDLPSPHYGALMEMNGELCYVTVITKNDDDKDDGDTGDDDDCYYWLGV 60
           MTNEEYGEILLPLDLPSPHYGALMEMNGELCYVTVITKNDDDKDDGDTGDDDDCYYWLGV
Sbjct: 220 MTNEEYGEILLPLDLPSPHYGALMEMNGELCYVTVITKNDDDKDDGDTGDDDDCYYWLGV 279

Query: 61  YGGGGHEMVLKRRIPLHDDNGVRFEGDVRVLSGLSEGAVMILVGNNVILYHVEERKGKFV 120
           YGGGGHEMVLKRRIPLHDDNGVRFEGDVRVLSGLSEGAVMILVGNNVILYHVEERKGKFV
Sbjct: 280 YGGGGHEMVLKRRIPLHDDNGVRFEGDVRVLSGLSEGAVMILVGNNVILYHVEERKGKFV 339

Query: 121 GIVDSAEIAAIDVEDGAVRFLPYVNSLASVCPVDEMPPEDHEFDKISRKMSRNKIV 177
           GIVDSAEIAAIDVEDGAVRFLPYVNSLASVCPVDEMPPEDHEFDKISRKMSRNKIV
Sbjct: 340 GIVDSAEIAAIDVEDGAVRFLPYVNSLASVCPVDEMPPEDHEFDKISRKMSRNKIV 395

BLAST of MELO3C017556 vs. NCBI nr
Match: gi|700198099|gb|KGN53257.1| (hypothetical protein Csa_4G038740 [Cucumis sativus])

HSP 1 Score: 310.5 bits (794), Expect = 1.9e-81
Identity = 152/175 (86.86%), Postives = 161/175 (92.00%), Query Frame = 1

Query: 1   MTNEEYGEILLPLDLPSPHYGALMEMNGELCYVTVITKNDDDKDDGDTGDDDDCYYWLGV 60
           +TNEEYGEILLPLDLPSPHYGALMEMNGELCYVTVITKN DD  D   GDDDDCYYWLGV
Sbjct: 224 LTNEEYGEILLPLDLPSPHYGALMEMNGELCYVTVITKNHDDGHDN--GDDDDCYYWLGV 283

Query: 61  YGGGGHEMVLKRRIPLHDDNGVRFEGDVRVLSGLSEGAVMILVGNNVILYHVEERKGKFV 120
           YGGGGH MVLK+RIPL+DDNG  FEGDVRVLSGLSEGAVMILVG+ VILYHVEERK +FV
Sbjct: 284 YGGGGHGMVLKKRIPLYDDNGFFFEGDVRVLSGLSEGAVMILVGSKVILYHVEERKRRFV 343

Query: 121 GIVDSAEIAAIDVEDGAVRFLPYVNSLASVCPVDEMPPEDHEFDKISRKMSRNKI 176
           GIV+ AEIAAIDV+DGAVRFLPYVNSLASVCPVDEMPPED+EFDKI +K SRNKI
Sbjct: 344 GIVEPAEIAAIDVDDGAVRFLPYVNSLASVCPVDEMPPEDYEFDKILKKKSRNKI 396

BLAST of MELO3C017556 vs. NCBI nr
Match: gi|778690606|ref|XP_011653138.1| (PREDICTED: F-box protein At5g49610 [Cucumis sativus])

HSP 1 Score: 310.5 bits (794), Expect = 1.9e-81
Identity = 152/175 (86.86%), Postives = 161/175 (92.00%), Query Frame = 1

Query: 1   MTNEEYGEILLPLDLPSPHYGALMEMNGELCYVTVITKNDDDKDDGDTGDDDDCYYWLGV 60
           +TNEEYGEILLPLDLPSPHYGALMEMNGELCYVTVITKN DD  D   GDDDDCYYWLGV
Sbjct: 220 LTNEEYGEILLPLDLPSPHYGALMEMNGELCYVTVITKNHDDGHDN--GDDDDCYYWLGV 279

Query: 61  YGGGGHEMVLKRRIPLHDDNGVRFEGDVRVLSGLSEGAVMILVGNNVILYHVEERKGKFV 120
           YGGGGH MVLK+RIPL+DDNG  FEGDVRVLSGLSEGAVMILVG+ VILYHVEERK +FV
Sbjct: 280 YGGGGHGMVLKKRIPLYDDNGFFFEGDVRVLSGLSEGAVMILVGSKVILYHVEERKRRFV 339

Query: 121 GIVDSAEIAAIDVEDGAVRFLPYVNSLASVCPVDEMPPEDHEFDKISRKMSRNKI 176
           GIV+ AEIAAIDV+DGAVRFLPYVNSLASVCPVDEMPPED+EFDKI +K SRNKI
Sbjct: 340 GIVEPAEIAAIDVDDGAVRFLPYVNSLASVCPVDEMPPEDYEFDKILKKKSRNKI 392

BLAST of MELO3C017556 vs. NCBI nr
Match: gi|590703784|ref|XP_007046972.1| (F-box family protein, putative isoform 2 [Theobroma cacao])

HSP 1 Score: 69.3 bits (168), Expect = 7.6e-09
Identity = 50/150 (33.33%), Postives = 68/150 (45.33%), Query Frame = 1

Query: 1   MTNEEYGEILLPLDLPSPHYGALMEMNGELCYVTVITKNDDDKDDGDTGDDDDCYYWLGV 60
           + NE+YG  +LPL L S  YGAL  M+GELCY+      D                   +
Sbjct: 262 LRNEQYG--ILPLPLSSREYGALTVMHGELCYILPCLIFDK----------------YNI 321

Query: 61  YGGGGHEMVLKRRIPLHDDNGVRFEGDVRVLSGLSEGAVMILVGNNVILYHVEERKGKFV 120
           Y  G  +M LK  +    D+     G  R L G ++  +M+++G  VI YHV E+K    
Sbjct: 322 YIYGNMDMRLKTVLQFTCDDVGSTYGVCRALPGANDDILMLVLGTRVIAYHVREQK---- 381

Query: 121 GIVDSAEIAAIDVEDGAVRFLPYVNSLASV 151
                 E+      D    +LPYVNSL SV
Sbjct: 382 -----LEVICTMTADSCTGYLPYVNSLVSV 384

BLAST of MELO3C017556 vs. NCBI nr
Match: gi|590703780|ref|XP_007046971.1| (F-box family protein, putative isoform 1 [Theobroma cacao])

HSP 1 Score: 69.3 bits (168), Expect = 7.6e-09
Identity = 50/150 (33.33%), Postives = 68/150 (45.33%), Query Frame = 1

Query: 1   MTNEEYGEILLPLDLPSPHYGALMEMNGELCYVTVITKNDDDKDDGDTGDDDDCYYWLGV 60
           + NE+YG  +LPL L S  YGAL  M+GELCY+      D                   +
Sbjct: 302 LRNEQYG--ILPLPLSSREYGALTVMHGELCYILPCLIFDK----------------YNI 361

Query: 61  YGGGGHEMVLKRRIPLHDDNGVRFEGDVRVLSGLSEGAVMILVGNNVILYHVEERKGKFV 120
           Y  G  +M LK  +    D+     G  R L G ++  +M+++G  VI YHV E+K    
Sbjct: 362 YIYGNMDMRLKTVLQFTCDDVGSTYGVCRALPGANDDILMLVLGTRVIAYHVREQK---- 421

Query: 121 GIVDSAEIAAIDVEDGAVRFLPYVNSLASV 151
                 E+      D    +LPYVNSL SV
Sbjct: 422 -----LEVICTMTADSCTGYLPYVNSLVSV 424

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KXX0_CUCSA1.4e-8186.86Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038740 PE=4 SV=1[more]
A0A061DFS9_THECC5.3e-0933.33F-box family protein, putative isoform 2 OS=Theobroma cacao GN=TCM_000410 PE=4 S... [more]
A0A061DFU7_THECC5.3e-0933.33Acyl-CoA N-acyltransferases (NAT) superfamily protein, putative isoform 1 OS=The... [more]
B9HEV7_POPTR1.2e-0836.42Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s12670g PE=4 SV=2[more]
A0A067GW25_CITSI1.3e-0735.10Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g015428mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659107551|ref|XP_008453733.1|6.7e-98100.00PREDICTED: F-box protein At5g49610-like [Cucumis melo][more]
gi|700198099|gb|KGN53257.1|1.9e-8186.86hypothetical protein Csa_4G038740 [Cucumis sativus][more]
gi|778690606|ref|XP_011653138.1|1.9e-8186.86PREDICTED: F-box protein At5g49610 [Cucumis sativus][more]
gi|590703784|ref|XP_007046972.1|7.6e-0933.33F-box family protein, putative isoform 2 [Theobroma cacao][more]
gi|590703780|ref|XP_007046971.1|7.6e-0933.33F-box family protein, putative isoform 1 [Theobroma cacao][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0019722 calcium-mediated signaling
biological_process GO:0006468 protein phosphorylation
biological_process GO:0048364 root development
biological_process GO:0009845 seed germination
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0044267 cellular protein metabolic process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005622 intracellular
cellular_component GO:0005886 plasma membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004674 protein serine/threonine kinase activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU49035melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C017556T1MELO3C017556T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU49035MU49035transcribed_cluster