Cp4.1LG01g06860 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g06860
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionConcanavalin A-like lectin/glucanase, subgroup
LocationCp4.1LG01 : 3902166 .. 3902783 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCAAAGGGGACGGATTTTGTATTGGTGATACCGTGTATTGGGAGACGTCAAACGGCATCATTCTGGGGTTTGATTTGAAATATGAAGTATATGGGGAGATTCAGCTCCCTCTCCCTCCCGGCCATGGAGCTATAACGGAGATCCGTGGAGAGATGTGCTATGCTATGGTAATAACTTGTAACATTGAGAATGATGAAATGGGTGCTCATTCGCTTGGCATTTATGGTGGTCATGACATGGTGTTGAAGCATCGATTTCCTCTCGATATTGGGAGTTATTTGGGAGAGGATTTTGATGGAGAGGTTAGAGTATTATCGTGTGTAAGTGATGGCATGGCGATGATTCTTGTGGGGAGCAATGTGATTCTGTATGATGTGGAAAAAAGAAAAGGGGAGATTGTGAAAAAATTAGTCGATCCGCCAGATCGTGCCAATGCCAGTGCCAGTGCCAGTGCCAGTGCCAGTGCGGGGCGGTTTCTGCCGTACGTGAATAGCCTTGTGAGGGTGTGTCCGGTGGAGAGGATGCCGCCGGAGGATCATGATTTACAAGAAATTTTGAGAAACACGAGCGAGTTGGTTGGGTTTGGTGAAGTTTCTTTATGTGGAAATAAGTGA

mRNA sequence

ATGTTCAAAGGGGACGGATTTTGTATTGGTGATACCGTGTATTGGGAGACGTCAAACGGCATCATTCTGGGGTTTGATTTGAAATATGAAGTATATGGGGAGATTCAGCTCCCTCTCCCTCCCGGCCATGGAGCTATAACGGAGATCCGTGGAGAGATGTGCTATGCTATGGTAATAACTTGTAACATTGAGAATGATGAAATGGGTGCTCATTCGCTTGGCATTTATGGTGGTCATGACATGGTGTTGAAGCATCGATTTCCTCTCGATATTGGGAGTTATTTGGGAGAGGATTTTGATGGAGAGGTTAGAGTATTATCGTGTGTAAGTGATGGCATGGCGATGATTCTTGTGGGGAGCAATGTGATTCTGTATGATGTGGAAAAAAGAAAAGGGGAGATTGTGAAAAAATTAGTCGATCCGCCAGATCGTGCCAATGCCAGTGCCAGTGCCAGTGCCAGTGCCAGTGCGGGGCGGTTTCTGCCGTACGTGAATAGCCTTGTGAGGGTGTGTCCGGTGGAGAGGATGCCGCCGGAGGATCATGATTTACAAGAAATTTTGAGAAACACGAGCGAGTTGGTTGGGTTTGGTGAAGTTTCTTTATGTGGAAATAAGTGA

Coding sequence (CDS)

ATGTTCAAAGGGGACGGATTTTGTATTGGTGATACCGTGTATTGGGAGACGTCAAACGGCATCATTCTGGGGTTTGATTTGAAATATGAAGTATATGGGGAGATTCAGCTCCCTCTCCCTCCCGGCCATGGAGCTATAACGGAGATCCGTGGAGAGATGTGCTATGCTATGGTAATAACTTGTAACATTGAGAATGATGAAATGGGTGCTCATTCGCTTGGCATTTATGGTGGTCATGACATGGTGTTGAAGCATCGATTTCCTCTCGATATTGGGAGTTATTTGGGAGAGGATTTTGATGGAGAGGTTAGAGTATTATCGTGTGTAAGTGATGGCATGGCGATGATTCTTGTGGGGAGCAATGTGATTCTGTATGATGTGGAAAAAAGAAAAGGGGAGATTGTGAAAAAATTAGTCGATCCGCCAGATCGTGCCAATGCCAGTGCCAGTGCCAGTGCCAGTGCCAGTGCGGGGCGGTTTCTGCCGTACGTGAATAGCCTTGTGAGGGTGTGTCCGGTGGAGAGGATGCCGCCGGAGGATCATGATTTACAAGAAATTTTGAGAAACACGAGCGAGTTGGTTGGGTTTGGTGAAGTTTCTTTATGTGGAAATAAGTGA

Protein sequence

MFKGDGFCIGDTVYWETSNGIILGFDLKYEVYGEIQLPLPPGHGAITEIRGEMCYAMVITCNIENDEMGAHSLGIYGGHDMVLKHRFPLDIGSYLGEDFDGEVRVLSCVSDGMAMILVGSNVILYDVEKRKGEIVKKLVDPPDRANASASASASASAGRFLPYVNSLVRVCPVERMPPEDHDLQEILRNTSELVGFGEVSLCGNK
BLAST of Cp4.1LG01g06860 vs. TrEMBL
Match: A0A0A0KXX0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038740 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.5e-41
Identity = 103/203 (50.74%), Postives = 130/203 (64.04%), Query Frame = 1

Query: 2   FKGDGFCIGDTVYWETSNGIILGFDLKYEVYGEIQLPL---PPGHGAITEIRGEMCYAMV 61
           F+GDGF +   VYWETSNG+IL FDL  E YGEI LPL    P +GA+ E+ GE+CY  V
Sbjct: 199 FRGDGFFMDGFVYWETSNGVILAFDLTNEEYGEILLPLDLPSPHYGALMEMNGELCYVTV 258

Query: 62  ITCNIE------NDEMGAHSLGIY--GGHDMVLKHRFPL--DIGSYLGEDFDGEVRVLSC 121
           IT N +      +D+   + LG+Y  GGH MVLK R PL  D G +    F+G+VRVLS 
Sbjct: 259 ITKNHDDGHDNGDDDDCYYWLGVYGGGGHGMVLKKRIPLYDDNGFF----FEGDVRVLSG 318

Query: 122 VSDGMAMILVGSNVILYDVEKRKGEIVKKLVDPPDRANASASASASASAGRFLPYVNSLV 181
           +S+G  MILVGS VILY VE+RK   V  +V+P +     A+      A RFLPYVNSL 
Sbjct: 319 LSEGAVMILVGSKVILYHVEERKRRFV-GIVEPAE----IAAIDVDDGAVRFLPYVNSLA 378

Query: 182 RVCPVERMPPEDHDLQEILRNTS 192
            VCPV+ MPPED++  +IL+  S
Sbjct: 379 SVCPVDEMPPEDYEFDKILKKKS 392

BLAST of Cp4.1LG01g06860 vs. TrEMBL
Match: B9HEV7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s12670g PE=4 SV=2)

HSP 1 Score: 104.4 bits (259), Expect = 1.7e-19
Identity = 68/174 (39.08%), Postives = 90/174 (51.72%), Query Frame = 1

Query: 4   GDGFCIGDTVYWETSNGIILGFDLKYEVYGEIQLPLPPGH--GAITEIRGEMCYAMVITC 63
           GDGF I   V+WET +G +LGFD K E YG + LP P  +  GA+TE+RGE+CY      
Sbjct: 248 GDGFYIRGFVFWETQSGAVLGFDCKEEEYGILSLP-PSSNPTGALTELRGELCYL----- 307

Query: 64  NIENDEMGAHSLGIYGGHDMVLKHRFPLDIGSYLGEDFDGEVRVLSCVSDGMAMILVGSN 123
            + + E  A S+ +YG  DM L+   PL     LG   DG+ R L+ V+D   +I +G  
Sbjct: 308 -LPHKEDDAWSIEVYGNMDMSLRRVIPLH-SEVLGHLVDGQCRALAFVNDDTMIIALGMK 367

Query: 124 VILYDVEKRKGEIVKKLVDPPDRANASASASASASAGRFLPYVNSLVRVCPVER 176
           VI Y V   K E V              S + +    ++LPYVNSL  V P  R
Sbjct: 368 VIAYHVRAHKMERV--------------SDARTDGFVKYLPYVNSLAPVGPFMR 399

BLAST of Cp4.1LG01g06860 vs. TrEMBL
Match: M5W934_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006904mg PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.2e-19
Identity = 63/168 (37.50%), Postives = 88/168 (52.38%), Query Frame = 1

Query: 4   GDGFCIGDTVYWETSNGIILGFDLKYEVYGEIQLPLPPG-HGAITEIRGEMCYAMVITCN 63
           GDG  +    +WETS G IL FDL  E YG + LPL  G HGA+  + GE+CY +     
Sbjct: 243 GDGLFMKGVAFWETSAGDILAFDLNEEQYGILSLPLGSGPHGALAVMHGELCYILPHRRG 302

Query: 64  IENDEMGAHSLGIYGGHDMVLKHRFPLDIGSYLGEDFDGEVRVLSCVSDGMAMILVGSNV 123
            E      ++L IYG  DM LKH   LD G +  E F  ++R L+CV+  + ++ +G  +
Sbjct: 303 YE------YNLDIYGDMDMNLKHSISLD-GDFFHE-FTEKMRALACVNSDVVIVNIGRIL 362

Query: 124 ILYDVEKRKGEIVKKLVDPPDRANASASASASASAGRFLPYVNSLVRV 171
           I YDV+  K E+++            +         R+LPYVNSLV V
Sbjct: 363 IAYDVKAGKAEVLR------------SGTGTDDGCVRYLPYVNSLVHV 390

BLAST of Cp4.1LG01g06860 vs. TrEMBL
Match: V4UHW2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025746mg PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.7e-17
Identity = 62/167 (37.13%), Postives = 92/167 (55.09%), Query Frame = 1

Query: 5   DGFCIGDTVYWETSNGIILGFDLKYEVYGEIQLPLPPG-HGAITEIRGEMCYAMVITCNI 64
           +GF +   VYW + +G IL FDLK E YG + LP   G HGA+T++ GE+CY +     I
Sbjct: 189 NGFYMNGFVYWTSLSGAILVFDLKDEQYGTLPLPAGSGPHGALTQMHGELCYMLP---QI 248

Query: 65  ENDEMGAHSLGIYGGHDMVLKHRFPLDIGSYLGEDFDGEVRVLSCVSDGMAMILVGSNVI 124
           ++ E     +G+YG  DM LK   P++    LGE F  + RVL+CV+  + +IL+ + VI
Sbjct: 249 QDGEC---LIGVYGNLDMSLKCVIPVE-HEVLGETFS-DCRVLTCVNSDILIILLPNKVI 308

Query: 125 LYDVEKRKGEIVKKLVDPPDRANASASASASASAGRFLPYVNSLVRV 171
            Y V+ +K ++V              S + +      LPY+NSLV V
Sbjct: 309 AYHVKAQKMQVV--------------SEAGTEGFQNCLPYINSLVAV 333

BLAST of Cp4.1LG01g06860 vs. TrEMBL
Match: V4SJB1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025746mg PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 4.7e-17
Identity = 62/167 (37.13%), Postives = 92/167 (55.09%), Query Frame = 1

Query: 5   DGFCIGDTVYWETSNGIILGFDLKYEVYGEIQLPLPPG-HGAITEIRGEMCYAMVITCNI 64
           +GF +   VYW + +G IL FDLK E YG + LP   G HGA+T++ GE+CY +     I
Sbjct: 261 NGFYMNGFVYWTSLSGAILVFDLKDEQYGTLPLPAGSGPHGALTQMHGELCYMLP---QI 320

Query: 65  ENDEMGAHSLGIYGGHDMVLKHRFPLDIGSYLGEDFDGEVRVLSCVSDGMAMILVGSNVI 124
           ++ E     +G+YG  DM LK   P++    LGE F  + RVL+CV+  + +IL+ + VI
Sbjct: 321 QDGEC---LIGVYGNLDMSLKCVIPVE-HEVLGETFS-DCRVLTCVNSDILIILLPNKVI 380

Query: 125 LYDVEKRKGEIVKKLVDPPDRANASASASASASAGRFLPYVNSLVRV 171
            Y V+ +K ++V              S + +      LPY+NSLV V
Sbjct: 381 AYHVKAQKMQVV--------------SEAGTEGFQNCLPYINSLVAV 405

BLAST of Cp4.1LG01g06860 vs. NCBI nr
Match: gi|659107551|ref|XP_008453733.1| (PREDICTED: F-box protein At5g49610-like [Cucumis melo])

HSP 1 Score: 184.5 bits (467), Expect = 1.9e-43
Identity = 105/203 (51.72%), Postives = 131/203 (64.53%), Query Frame = 1

Query: 2   FKGDGFCIGDTVYWETSNGIILGFDLKYEVYGEIQLPLP---PGHGAITEIRGEMCYAMV 61
           FKGDGF +   VYWETSNGIIL FD+  E YGEI LPL    P +GA+ E+ GE+CY  V
Sbjct: 195 FKGDGFFMDGFVYWETSNGIILAFDMTNEEYGEILLPLDLPSPHYGALMEMNGELCYVTV 254

Query: 62  ITCNIENDEMGA--------HSLGIYGG--HDMVLKHRFPLDIGSYLGEDFDGEVRVLSC 121
           IT N ++ + G         + LG+YGG  H+MVLK R PL   +  G  F+G+VRVLS 
Sbjct: 255 ITKNDDDKDDGDTGDDDDCYYWLGVYGGGGHEMVLKRRIPLHDDN--GVRFEGDVRVLSG 314

Query: 122 VSDGMAMILVGSNVILYDVEKRKGEIVKKLVDPPDRANASASASASASAGRFLPYVNSLV 181
           +S+G  MILVG+NVILY VE+RKG+ V  +VD  +     A+      A RFLPYVNSL 
Sbjct: 315 LSEGAVMILVGNNVILYHVEERKGKFV-GIVDSAE----IAAIDVEDGAVRFLPYVNSLA 374

Query: 182 RVCPVERMPPEDHDLQEILRNTS 192
            VCPV+ MPPEDH+  +I R  S
Sbjct: 375 SVCPVDEMPPEDHEFDKISRKMS 390

BLAST of Cp4.1LG01g06860 vs. NCBI nr
Match: gi|700198099|gb|KGN53257.1| (hypothetical protein Csa_4G038740 [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 5.1e-41
Identity = 103/203 (50.74%), Postives = 130/203 (64.04%), Query Frame = 1

Query: 2   FKGDGFCIGDTVYWETSNGIILGFDLKYEVYGEIQLPL---PPGHGAITEIRGEMCYAMV 61
           F+GDGF +   VYWETSNG+IL FDL  E YGEI LPL    P +GA+ E+ GE+CY  V
Sbjct: 199 FRGDGFFMDGFVYWETSNGVILAFDLTNEEYGEILLPLDLPSPHYGALMEMNGELCYVTV 258

Query: 62  ITCNIE------NDEMGAHSLGIY--GGHDMVLKHRFPL--DIGSYLGEDFDGEVRVLSC 121
           IT N +      +D+   + LG+Y  GGH MVLK R PL  D G +    F+G+VRVLS 
Sbjct: 259 ITKNHDDGHDNGDDDDCYYWLGVYGGGGHGMVLKKRIPLYDDNGFF----FEGDVRVLSG 318

Query: 122 VSDGMAMILVGSNVILYDVEKRKGEIVKKLVDPPDRANASASASASASAGRFLPYVNSLV 181
           +S+G  MILVGS VILY VE+RK   V  +V+P +     A+      A RFLPYVNSL 
Sbjct: 319 LSEGAVMILVGSKVILYHVEERKRRFV-GIVEPAE----IAAIDVDDGAVRFLPYVNSLA 378

Query: 182 RVCPVERMPPEDHDLQEILRNTS 192
            VCPV+ MPPED++  +IL+  S
Sbjct: 379 SVCPVDEMPPEDYEFDKILKKKS 392

BLAST of Cp4.1LG01g06860 vs. NCBI nr
Match: gi|778690606|ref|XP_011653138.1| (PREDICTED: F-box protein At5g49610 [Cucumis sativus])

HSP 1 Score: 176.4 bits (446), Expect = 5.1e-41
Identity = 103/203 (50.74%), Postives = 130/203 (64.04%), Query Frame = 1

Query: 2   FKGDGFCIGDTVYWETSNGIILGFDLKYEVYGEIQLPL---PPGHGAITEIRGEMCYAMV 61
           F+GDGF +   VYWETSNG+IL FDL  E YGEI LPL    P +GA+ E+ GE+CY  V
Sbjct: 195 FRGDGFFMDGFVYWETSNGVILAFDLTNEEYGEILLPLDLPSPHYGALMEMNGELCYVTV 254

Query: 62  ITCNIE------NDEMGAHSLGIY--GGHDMVLKHRFPL--DIGSYLGEDFDGEVRVLSC 121
           IT N +      +D+   + LG+Y  GGH MVLK R PL  D G +    F+G+VRVLS 
Sbjct: 255 ITKNHDDGHDNGDDDDCYYWLGVYGGGGHGMVLKKRIPLYDDNGFF----FEGDVRVLSG 314

Query: 122 VSDGMAMILVGSNVILYDVEKRKGEIVKKLVDPPDRANASASASASASAGRFLPYVNSLV 181
           +S+G  MILVGS VILY VE+RK   V  +V+P +     A+      A RFLPYVNSL 
Sbjct: 315 LSEGAVMILVGSKVILYHVEERKRRFV-GIVEPAE----IAAIDVDDGAVRFLPYVNSLA 374

Query: 182 RVCPVERMPPEDHDLQEILRNTS 192
            VCPV+ MPPED++  +IL+  S
Sbjct: 375 SVCPVDEMPPEDYEFDKILKKKS 388

BLAST of Cp4.1LG01g06860 vs. NCBI nr
Match: gi|470102944|ref|XP_004287908.1| (PREDICTED: uncharacterized protein LOC101305105 [Fragaria vesca subsp. vesca])

HSP 1 Score: 105.1 bits (261), Expect = 1.4e-19
Identity = 61/168 (36.31%), Postives = 90/168 (53.57%), Query Frame = 1

Query: 4   GDGFCIGDTVYWETSNGIILGFDLKYEVYGEIQLPLPPG-HGAITEIRGEMCYAMVITCN 63
           G G  +   V+WET  G IL F+LK E YG + LP   G HG +  + GE+CY + +   
Sbjct: 365 GHGLFLKGMVFWETLAGTILAFNLKEEQYGILPLPCRSGPHGVMAVMYGELCYILPVL-- 424

Query: 64  IENDEMGAHSLGIYGGHDMVLKHRFPLDIGSYLGEDFDGEVRVLSCVSDGMAMILVGSNV 123
               E   ++L IYG  DM LKH   L  G +   ++D E+R L+CV+D + ++L+G  +
Sbjct: 425 ----EDSVYTLKIYGDMDMKLKHIIRLADGIFT--NYDEELRALACVNDDVVIVLLGMKL 484

Query: 124 ILYDVEKRKGEIVKKLVDPPDRANASASASASASAGRFLPYVNSLVRV 171
           I Y V+  K +I++  +              SA    +LPYVNSLV+V
Sbjct: 485 IAYHVKAEKADIIQSYI------------GTSAGYAGYLPYVNSLVQV 512

BLAST of Cp4.1LG01g06860 vs. NCBI nr
Match: gi|645272986|ref|XP_008241660.1| (PREDICTED: F-box protein At5g49610-like [Prunus mume])

HSP 1 Score: 104.8 bits (260), Expect = 1.9e-19
Identity = 63/168 (37.50%), Postives = 90/168 (53.57%), Query Frame = 1

Query: 4   GDGFCIGDTVYWETSNGIILGFDLKYEVYGEIQLPLPPG-HGAITEIRGEMCYAMVITCN 63
           GDG  +    +WETS G IL FDL  E YG + LPL  G HGA+ E+ GE+CY       
Sbjct: 263 GDGLFMKGVAFWETSAGDILAFDLNEEQYGILSLPLGSGPHGALVEMHGELCYI------ 322

Query: 64  IENDEMGAHSLGIYGGHDMVLKHRFPLDIGSYLGEDFDGEVRVLSCVSDGMAMILVGSNV 123
           + + +   ++L IYG  DM LKH   LD G +  E F  ++R L+CV+  + ++ +G  +
Sbjct: 323 LPHRKGHEYNLDIYGDMDMNLKHSISLD-GDFFRE-FTEKMRALACVNSDVVIVDIGGIL 382

Query: 124 ILYDVEKRKGEIVKKLVDPPDRANASASASASASAGRFLPYVNSLVRV 171
           I YDV+  K E+++            +         R+LPYVNSLV V
Sbjct: 383 IAYDVKAGKAEVLR------------SGTRTDDGYMRYLPYVNSLVHV 410

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KXX0_CUCSA3.5e-4150.74Uncharacterized protein OS=Cucumis sativus GN=Csa_4G038740 PE=4 SV=1[more]
B9HEV7_POPTR1.7e-1939.08Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0007s12670g PE=4 SV=2[more]
M5W934_PRUPE2.2e-1937.50Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006904mg PE=4 SV=1[more]
V4UHW2_9ROSI4.7e-1737.13Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025746mg PE=4 SV=1[more]
V4SJB1_9ROSI4.7e-1737.13Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025746mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|659107551|ref|XP_008453733.1|1.9e-4351.72PREDICTED: F-box protein At5g49610-like [Cucumis melo][more]
gi|700198099|gb|KGN53257.1|5.1e-4150.74hypothetical protein Csa_4G038740 [Cucumis sativus][more]
gi|778690606|ref|XP_011653138.1|5.1e-4150.74PREDICTED: F-box protein At5g49610 [Cucumis sativus][more]
gi|470102944|ref|XP_004287908.1|1.4e-1936.31PREDICTED: uncharacterized protein LOC101305105 [Fragaria vesca subsp. vesca][more]
gi|645272986|ref|XP_008241660.1|1.9e-1937.50PREDICTED: F-box protein At5g49610-like [Prunus mume][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0044267 cellular protein metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g06860.1Cp4.1LG01g06860.1mRNA