MELO3C017337 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C017337
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionS-adenosylmethionine synthase
Locationchr2 : 23322793 .. 23323065 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAGAAGCTCAGATGTGCATTGCCCGTCCCCTAGGCCTGTAAGGAAGGGTAACAAAATCAAGAAGTTTCGTAGAGAACCTGAAGAATTGGCTTCTGCTAAACCCTTCTTAAGCAGAGGAATGTGGCTCATTCAACAACTTCTCAAGCAGCTTTTAACCATCTACCTAATTACTCAGACTGGAACATTTCTATGGCCTAGTCCTCAAATCTATGGAGGGTTAACAATCATTGTGCAAAATTATGGCTGCAGATTCTTGCCACTGCTGTAA

mRNA sequence

ATGGCCAGAAGCTCAGATGTGCATTGCCCGTCCCCTAGGCCTGTAAGGAAGGGTAACAAAATCAAGAAGTTTCGTAGAGAACCTGAAGAATTGGCTTCTGCTAAACCCTTCTTAAGCAGAGGAATGTGGCTCATTCAACAACTTCTCAAGCAGCTTTTAACCATCTACCTAATTACTCAGACTGGAACATTTCTATGGCCTAGTCCTCAAATCTATGGAGGGTTAACAATCATTGTGCAAAATTATGGCTGCAGATTCTTGCCACTGCTGTAA

Coding sequence (CDS)

ATGGCCAGAAGCTCAGATGTGCATTGCCCGTCCCCTAGGCCTGTAAGGAAGGGTAACAAAATCAAGAAGTTTCGTAGAGAACCTGAAGAATTGGCTTCTGCTAAACCCTTCTTAAGCAGAGGAATGTGGCTCATTCAACAACTTCTCAAGCAGCTTTTAACCATCTACCTAATTACTCAGACTGGAACATTTCTATGGCCTAGTCCTCAAATCTATGGAGGGTTAACAATCATTGTGCAAAATTATGGCTGCAGATTCTTGCCACTGCTGTAA

Protein sequence

MARSSDVHCPSPRPVRKGNKIKKFRREPEELASAKPFLSRGMWLIQQLLKQLLTIYLITQTGTFLWPSPQIYGGLTIIVQNYGCRFLPLL*
Homology
[Close]
BLAST of MELO3C017337 vs. TrEMBL
Match: A0A0A0LPM9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G024820 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 2.7e-09
Identity = 34/41 (82.93%), Postives = 35/41 (85.37%), Query Frame = 1 

Query: 1  MARSSDVHCPSPRPVRKGNKIKKFRREPEELASAKPFLSRG 42
          MA S  VHCPSP PVRKGNKIKKF RE EELASA+PFLSRG
Sbjct: 1  MATSPAVHCPSPWPVRKGNKIKKFCRETEELASAEPFLSRG 41

[Close]
BLAST of MELO3C017337 vs. NCBI nr
Match: gi|700208754|gb|KGN63850.1| (hypothetical protein Csa_1G024820 [Cucumis sativus])

HSP 1 Score: 69.3 bits (168), Expect = 3.9e-09
Identity = 34/41 (82.93%), Postives = 35/41 (85.37%), Query Frame = 1 

Query: 1  MARSSDVHCPSPRPVRKGNKIKKFRREPEELASAKPFLSRG 42
          MA S  VHCPSP PVRKGNKIKKF RE EELASA+PFLSRG
Sbjct: 1  MATSPAVHCPSPWPVRKGNKIKKFCRETEELASAEPFLSRG 41

The following BLAST results are available for this feature:
BLAST of MELO3C017337 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LPM9_CUCSA2.7e-0982.93Uncharacterized protein OS=Cucumis sativus GN=Csa_1G024820 PE=4 SV=1[more]
BLAST of MELO3C017337 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700208754|gb|KGN63850.1|3.9e-0982.93hypothetical protein Csa_1G024820 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU55539melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C017337T1MELO3C017337T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU55539MU55539transcribed_cluster


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C017337Csa1G024820Cucumber (Chinese Long) v2cumeB055
MELO3C017337CsaV3_1G004110Cucumber (Chinese Long) v3cucmeB055
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C017337Silver-seed gourdcarmeB0396
MELO3C017337Silver-seed gourdcarmeB0599
MELO3C017337Silver-seed gourdcarmeB0785
MELO3C017337Silver-seed gourdcarmeB0835
MELO3C017337Silver-seed gourdcarmeB1020
MELO3C017337Cucumber (Chinese Long) v3cucmeB056
MELO3C017337Cucumber (Chinese Long) v3cucmeB401
MELO3C017337Watermelon (97103) v2mewmbB261
MELO3C017337Watermelon (97103) v2mewmbB253
MELO3C017337Watermelon (97103) v2mewmbB255
MELO3C017337Wax gourdmewgoB283
MELO3C017337Wax gourdmewgoB285
MELO3C017337Wax gourdmewgoB306
MELO3C017337Melon (DHL92) v3.5.1memeB028
MELO3C017337Melon (DHL92) v3.5.1memeB066
MELO3C017337Cucumber (Gy14) v1cgymeB160
MELO3C017337Cucumber (Gy14) v1cgymeB186
MELO3C017337Cucumber (Gy14) v1cgymeB478
MELO3C017337Cucurbita maxima (Rimu)cmameB067
MELO3C017337Cucurbita maxima (Rimu)cmameB120
MELO3C017337Cucurbita maxima (Rimu)cmameB207
MELO3C017337Cucurbita maxima (Rimu)cmameB370
MELO3C017337Cucurbita maxima (Rimu)cmameB372
MELO3C017337Cucurbita maxima (Rimu)cmameB673
MELO3C017337Cucurbita moschata (Rifu)cmomeB059
MELO3C017337Cucurbita moschata (Rifu)cmomeB109
MELO3C017337Cucurbita moschata (Rifu)cmomeB191
MELO3C017337Cucurbita moschata (Rifu)cmomeB361
MELO3C017337Wild cucumber (PI 183967)cpimeB056
MELO3C017337Wild cucumber (PI 183967)cpimeB058
MELO3C017337Wild cucumber (PI 183967)cpimeB387
MELO3C017337Cucumber (Chinese Long) v2cumeB056
MELO3C017337Cucumber (Chinese Long) v2cumeB392
MELO3C017337Watermelon (Charleston Gray)mewcgB248
MELO3C017337Watermelon (Charleston Gray)mewcgB249
MELO3C017337Watermelon (Charleston Gray)mewcgB254
MELO3C017337Watermelon (97103) v1mewmB275
MELO3C017337Watermelon (97103) v1mewmB281
MELO3C017337Watermelon (97103) v1mewmB289
MELO3C017337Cucurbita pepo (Zucchini)cpemeB033
MELO3C017337Cucurbita pepo (Zucchini)cpemeB034
MELO3C017337Cucurbita pepo (Zucchini)cpemeB330
MELO3C017337Cucurbita pepo (Zucchini)cpemeB395
MELO3C017337Cucurbita pepo (Zucchini)cpemeB483
MELO3C017337Cucurbita pepo (Zucchini)cpemeB615
MELO3C017337Bottle gourd (USVL1VR-Ls)lsimeB209
MELO3C017337Bottle gourd (USVL1VR-Ls)lsimeB294
MELO3C017337Bottle gourd (USVL1VR-Ls)lsimeB397
MELO3C017337Cucumber (Gy14) v2cgybmeB050
MELO3C017337Cucumber (Gy14) v2cgybmeB052
MELO3C017337Cucumber (Gy14) v2cgybmeB336