MELO3C016982 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C016982
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPhosphatidylserine decarboxylase proenzyme
Locationchr7 : 644248 .. 644541 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATTCACTCAAAGCAAGTTCGTCGTTGTCCACAAAATGGTACTATCAACGCCATATCTTACAGACCTCCACACAAACAAAAACGAAGTCTAAACAAGGACAGGGGGGTTACGCTTCAAGTGACAAGTTCACTCTGTAATACAAACGAGCGATTATTCTACGCCGGAACCTCTACCTTTGCTGTCTCACCACCACCAAGTTCTATACCTCTACCCACTTTTGTAATGAAGCCTGGTCTGTTTAGATCAACTACAGATGGAAGTACTCGGAACTCACGGACACAAAAGTAG

mRNA sequence

ATGGAAATTCACTCAAAGCAAGTTCGTCGTTGTCCACAAAATGGTACTATCAACGCCATATCTTACAGACCTCCACACAAACAAAAACGAAGTCTAAACAAGGACAGGGGGGTTACGCTTCAAGTGACAAGTTCACTCTGTAATACAAACGAGCGATTATTCTACGCCGGAACCTCTACCTTTGCTGTCTCACCACCACCAAGTTCTATACCTCTACCCACTTTTGTAATGAAGCCTGGTCTGTTTAGATCAACTACAGATGGAAGTACTCGGAACTCACGGACACAAAAGTAG

Coding sequence (CDS)

ATGGAAATTCACTCAAAGCAAGTTCGTCGTTGTCCACAAAATGGTACTATCAACGCCATATCTTACAGACCTCCACACAAACAAAAACGAAGTCTAAACAAGGACAGGGGGGTTACGCTTCAAGTGACAAGTTCACTCTGTAATACAAACGAGCGATTATTCTACGCCGGAACCTCTACCTTTGCTGTCTCACCACCACCAAGTTCTATACCTCTACCCACTTTTGTAATGAAGCCTGGTCTGTTTAGATCAACTACAGATGGAAGTACTCGGAACTCACGGACACAAAAGTAG

Protein sequence

MEIHSKQVRRCPQNGTINAISYRPPHKQKRSLNKDRGVTLQVTSSLCNTNERLFYAGTSTFAVSPPPSSIPLPTFVMKPGLFRSTTDGSTRNSRTQK*
Homology
[Close]
BLAST of MELO3C016982 vs. TrEMBL
Match: A0A0A0L158_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G652660 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 9.3e-32
Identity = 73/99 (73.74%), Postives = 82/99 (82.83%), Query Frame = 1 

Query: 1  MEIHSKQ----VRRCPQNGTINAISYRPPHKQKRSLNKDRGVTLQVTSSLCNTNERLFYA 60
          MEI+SK     V RCPQ+G+ NAI  RPP+KQK+SLNK + V  QVTSSLCNT ER+FYA
Sbjct: 1  MEINSKDSSIHVLRCPQDGSKNAIPCRPPNKQKQSLNKAKVVKFQVTSSLCNTKERIFYA 60

Query: 61 GTSTFAVSPPPSSIPLPTFVMKPGLFRSTTDGSTRNSRT 96
          GTSTF +SPPPSSIPLPTFVMK GLFRST DGST+NSRT
Sbjct: 61 GTSTFGISPPPSSIPLPTFVMKTGLFRSTIDGSTQNSRT 99

[Close]
BLAST of MELO3C016982 vs. NCBI nr
Match: gi|700200295|gb|KGN55453.1| (hypothetical protein Csa_4G652660 [Cucumis sativus])

HSP 1 Score: 144.1 bits (362), Expect = 1.3e-31
Identity = 73/99 (73.74%), Postives = 82/99 (82.83%), Query Frame = 1 

Query: 1  MEIHSKQ----VRRCPQNGTINAISYRPPHKQKRSLNKDRGVTLQVTSSLCNTNERLFYA 60
          MEI+SK     V RCPQ+G+ NAI  RPP+KQK+SLNK + V  QVTSSLCNT ER+FYA
Sbjct: 1  MEINSKDSSIHVLRCPQDGSKNAIPCRPPNKQKQSLNKAKVVKFQVTSSLCNTKERIFYA 60

Query: 61 GTSTFAVSPPPSSIPLPTFVMKPGLFRSTTDGSTRNSRT 96
          GTSTF +SPPPSSIPLPTFVMK GLFRST DGST+NSRT
Sbjct: 61 GTSTFGISPPPSSIPLPTFVMKTGLFRSTIDGSTQNSRT 99

The following BLAST results are available for this feature:
BLAST of MELO3C016982 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L158_CUCSA9.3e-3273.74Uncharacterized protein OS=Cucumis sativus GN=Csa_4G652660 PE=4 SV=1[more]
BLAST of MELO3C016982 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700200295|gb|KGN55453.1|1.3e-3173.74hypothetical protein Csa_4G652660 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C016982T1MELO3C016982T1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C016982Csa4G652660Cucumber (Chinese Long) v2cumeB313
MELO3C016982CSPI04G26450Wild cucumber (PI 183967)cpimeB311
MELO3C016982CsGy4G024810Cucumber (Gy14) v2cgybmeB270
MELO3C016982CsaV3_4G036800Cucumber (Chinese Long) v3cucmeB316
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C016982Cucumber (Gy14) v1cgymeB134
MELO3C016982Cucumber (Gy14) v1cgymeB283
MELO3C016982Cucumber (Gy14) v1cgymeB454
MELO3C016982Cucurbita maxima (Rimu)cmameB040
MELO3C016982Cucurbita maxima (Rimu)cmameB080
MELO3C016982Cucurbita maxima (Rimu)cmameB143
MELO3C016982Cucurbita maxima (Rimu)cmameB181
MELO3C016982Cucurbita maxima (Rimu)cmameB446
MELO3C016982Cucurbita maxima (Rimu)cmameB743
MELO3C016982Cucurbita moschata (Rifu)cmomeB029
MELO3C016982Cucurbita moschata (Rifu)cmomeB074
MELO3C016982Cucurbita moschata (Rifu)cmomeB132
MELO3C016982Cucurbita moschata (Rifu)cmomeB170
MELO3C016982Cucurbita moschata (Rifu)cmomeB438
MELO3C016982Cucurbita moschata (Rifu)cmomeB731
MELO3C016982Wild cucumber (PI 183967)cpimeB149
MELO3C016982Wild cucumber (PI 183967)cpimeB574
MELO3C016982Cucumber (Chinese Long) v2cumeB150
MELO3C016982Cucumber (Chinese Long) v2cumeB563
MELO3C016982Watermelon (Charleston Gray)mewcgB479
MELO3C016982Watermelon (Charleston Gray)mewcgB501
MELO3C016982Watermelon (97103) v1mewmB491
MELO3C016982Watermelon (97103) v1mewmB499
MELO3C016982Watermelon (97103) v1mewmB528
MELO3C016982Cucurbita pepo (Zucchini)cpemeB108
MELO3C016982Cucurbita pepo (Zucchini)cpemeB536
MELO3C016982Cucurbita pepo (Zucchini)cpemeB643
MELO3C016982Cucurbita pepo (Zucchini)cpemeB734
MELO3C016982Cucurbita pepo (Zucchini)cpemeB783
MELO3C016982Bottle gourd (USVL1VR-Ls)lsimeB325
MELO3C016982Bottle gourd (USVL1VR-Ls)lsimeB486
MELO3C016982Cucumber (Gy14) v2cgybmeB072
MELO3C016982Cucumber (Gy14) v2cgybmeB129
MELO3C016982Cucumber (Gy14) v2cgybmeB503
MELO3C016982Silver-seed gourdcarmeB0146
MELO3C016982Silver-seed gourdcarmeB0633
MELO3C016982Silver-seed gourdcarmeB0676
MELO3C016982Silver-seed gourdcarmeB0959
MELO3C016982Cucumber (Chinese Long) v3cucmeB151
MELO3C016982Cucumber (Chinese Long) v3cucmeB586
MELO3C016982Watermelon (97103) v2mewmbB484
MELO3C016982Watermelon (97103) v2mewmbB504
MELO3C016982Watermelon (97103) v2mewmbB510
MELO3C016982Wax gourdmewgoB587
MELO3C016982Wax gourdmewgoB595
MELO3C016982Wax gourdmewgoB612
MELO3C016982Melon (DHL92) v3.5.1memeB099
MELO3C016982Melon (DHL92) v3.5.1memeB129