Csa4G652660 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa4G652660
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr4 : 22725242 .. 22725547 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAATTAACTCAAAGGATTCATCTATCCACGTTCTTCGTTGTCCTCAAGATGGTTCTAAGAACGCCATACCTTGCAGACCTCCAAACAAACAAAAACAAAGCCTAAACAAGGCCAAGGTGGTTAAGTTTCAAGTGACAAGTTCACTCTGTAATACAAAAGAGCGAATTTTCTACGCCGGAACCTCTACCTTTGGTATCTCACCACCACCAAGTTCTATACCTCTACCCACTTTTGTAATGAAGACTGGTCTGTTTAGATCAACTATAGATGGAAGTACTCAGAACTCACGGACACACATGTAG

mRNA sequence

ATGGAAATTAACTCAAAGGATTCATCTATCCACGTTCTTCGTTGTCCTCAAGATGGTTCTAAGAACGCCATACCTTGCAGACCTCCAAACAAACAAAAACAAAGCCTAAACAAGGCCAAGGTGGTTAAGTTTCAAGTGACAAGTTCACTCTGTAATACAAAAGAGCGAATTTTCTACGCCGGAACCTCTACCTTTGGTATCTCACCACCACCAAGTTCTATACCTCTACCCACTTTTGTAATGAAGACTGGTCTGTTTAGATCAACTATAGATGGAAGTACTCAGAACTCACGGACACACATGTAG

Coding sequence (CDS)

ATGGAAATTAACTCAAAGGATTCATCTATCCACGTTCTTCGTTGTCCTCAAGATGGTTCTAAGAACGCCATACCTTGCAGACCTCCAAACAAACAAAAACAAAGCCTAAACAAGGCCAAGGTGGTTAAGTTTCAAGTGACAAGTTCACTCTGTAATACAAAAGAGCGAATTTTCTACGCCGGAACCTCTACCTTTGGTATCTCACCACCACCAAGTTCTATACCTCTACCCACTTTTGTAATGAAGACTGGTCTGTTTAGATCAACTATAGATGGAAGTACTCAGAACTCACGGACACACATGTAG

Protein sequence

MEINSKDSSIHVLRCPQDGSKNAIPCRPPNKQKQSLNKAKVVKFQVTSSLCNTKERIFYAGTSTFGISPPPSSIPLPTFVMKTGLFRSTIDGSTQNSRTHM*
Homology
[Close]
BLAST of Csa4G652660 vs. TrEMBL
Match: A0A0A0L158_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G652660 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 5.5e-51
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MEINSKDSSIHVLRCPQDGSKNAIPCRPPNKQKQSLNKAKVVKFQVTSSLCNTKERIFYA 60
           MEINSKDSSIHVLRCPQDGSKNAIPCRPPNKQKQSLNKAKVVKFQVTSSLCNTKERIFYA
Sbjct: 1   MEINSKDSSIHVLRCPQDGSKNAIPCRPPNKQKQSLNKAKVVKFQVTSSLCNTKERIFYA 60

Query: 61  GTSTFGISPPPSSIPLPTFVMKTGLFRSTIDGSTQNSRTHM 102
           GTSTFGISPPPSSIPLPTFVMKTGLFRSTIDGSTQNSRTHM
Sbjct: 61  GTSTFGISPPPSSIPLPTFVMKTGLFRSTIDGSTQNSRTHM 101

[Close]
BLAST of Csa4G652660 vs. NCBI nr
Match: gi|700200295|gb|KGN55453.1| (hypothetical protein Csa_4G652660 [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 7.8e-51
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MEINSKDSSIHVLRCPQDGSKNAIPCRPPNKQKQSLNKAKVVKFQVTSSLCNTKERIFYA 60
           MEINSKDSSIHVLRCPQDGSKNAIPCRPPNKQKQSLNKAKVVKFQVTSSLCNTKERIFYA
Sbjct: 1   MEINSKDSSIHVLRCPQDGSKNAIPCRPPNKQKQSLNKAKVVKFQVTSSLCNTKERIFYA 60

Query: 61  GTSTFGISPPPSSIPLPTFVMKTGLFRSTIDGSTQNSRTHM 102
           GTSTFGISPPPSSIPLPTFVMKTGLFRSTIDGSTQNSRTHM
Sbjct: 61  GTSTFGISPPPSSIPLPTFVMKTGLFRSTIDGSTQNSRTHM 101

The following BLAST results are available for this feature:
BLAST of Csa4G652660 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L158_CUCSA5.5e-51100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_4G652660 PE=4 SV=1[more]
BLAST of Csa4G652660 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700200295|gb|KGN55453.1|7.8e-51100.00hypothetical protein Csa_4G652660 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa4G652660.1Csa4G652660.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa4G652660MELO3C016982Melon (DHL92) v3.5.1cumeB313
Csa4G652660MELO3C016982.2Melon (DHL92) v3.6.1cumedB298
Csa4G652660CSPI04G26450Wild cucumber (PI 183967)cpicuB181
Csa4G652660CsGy4G024810Cucumber (Gy14) v2cgybcuB166
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa4G652660Silver-seed gourdcarcuB0156
Csa4G652660Silver-seed gourdcarcuB0656
Csa4G652660Silver-seed gourdcarcuB0689
Csa4G652660Silver-seed gourdcarcuB0994
Csa4G652660Watermelon (97103) v2cuwmbB306
Csa4G652660Watermelon (97103) v2cuwmbB328
Csa4G652660Watermelon (97103) v2cuwmbB334
Csa4G652660Wax gourdcuwgoB387
Csa4G652660Wax gourdcuwgoB419
Csa4G652660Wax gourdcuwgoB426
Csa4G652660Cucumber (Chinese Long) v2cucuB063
Csa4G652660Cucumber (Chinese Long) v2cucuB150
Csa4G652660Cucumber (Gy14) v1cgycuB125
Csa4G652660Cucumber (Gy14) v1cgycuB240
Csa4G652660Cucumber (Gy14) v1cgycuB387
Csa4G652660Cucurbita maxima (Rimu)cmacuB134
Csa4G652660Cucurbita maxima (Rimu)cmacuB020
Csa4G652660Cucurbita maxima (Rimu)cmacuB079
Csa4G652660Cucurbita maxima (Rimu)cmacuB187
Csa4G652660Cucurbita maxima (Rimu)cmacuB469
Csa4G652660Cucurbita maxima (Rimu)cmacuB800
Csa4G652660Cucurbita moschata (Rifu)cmocuB011
Csa4G652660Cucurbita moschata (Rifu)cmocuB069
Csa4G652660Cucurbita moschata (Rifu)cmocuB120
Csa4G652660Cucurbita moschata (Rifu)cmocuB170
Csa4G652660Cucurbita moschata (Rifu)cmocuB457
Csa4G652660Cucurbita moschata (Rifu)cmocuB791
Csa4G652660Melon (DHL92) v3.5.1cumeB282
Csa4G652660Melon (DHL92) v3.5.1cumeB291
Csa4G652660Watermelon (Charleston Gray)cuwcgB309
Csa4G652660Watermelon (Charleston Gray)cuwcgB334
Csa4G652660Watermelon (97103) v1cuwmB288
Csa4G652660Watermelon (97103) v1cuwmB300
Csa4G652660Watermelon (97103) v1cuwmB320
Csa4G652660Cucurbita pepo (Zucchini)cpecuB115
Csa4G652660Cucurbita pepo (Zucchini)cpecuB576
Csa4G652660Cucurbita pepo (Zucchini)cpecuB678
Csa4G652660Cucurbita pepo (Zucchini)cpecuB782
Csa4G652660Cucurbita pepo (Zucchini)cpecuB833
Csa4G652660Bottle gourd (USVL1VR-Ls)culsiB318
Csa4G652660Bottle gourd (USVL1VR-Ls)culsiB285
Csa4G652660Cucumber (Gy14) v2cgybcuB030
Csa4G652660Cucumber (Gy14) v2cgybcuB074
Csa4G652660Cucumber (Gy14) v2cgybcuB315
Csa4G652660Melon (DHL92) v3.6.1cumedB267
Csa4G652660Melon (DHL92) v3.6.1cumedB276