MELO3C016928 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C016928
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Ubiquitin carboxyl-terminal hydrolase family protein
Location	chr7 : 1081649 .. 1083276 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCTTGGATTGCCAATTCTTCTAAAGCCCTAATCTCGAACGAGTACAATGCTAATCATTCTCGCTTTCTTCAGTTTTTTAACCTGAACGAACTCGCAAATTATCTATGCAGAAATAGTTTTGTGGAGTCGTGGTCATGGTCGCAAATCCGGTTGATGACAACCAGTAAACGCGTTCAGGATAGAAGCCGCTTTAAGAGAGTGCAGGATCTTGAAATGGCGACGGAGAAGTGGAAGGTAGCTCACAAGGTACTTTTCTTGATTGAAACTCTCAAGGAAGAGCCTGAGATGATAATTCCCGTTAGGGATTTAGAGCGATATCGTAGAAAAATTAATCTTCCGAAACCACATAGGATCTCAGAATTCATTCGAAAATCGCCTGAACTGTTTGAATTATACAAGGATCAGAGGGGTGTGTTGTGGTGTGGATTGACTAAACAAGCCGAAGATTTGGTGGAAGAGGAGAATAAGATAATTGAACAACACGCTGACAAAGTTGCCGAGTATGTTACCAGGTTTTTGATGATGTCAGTGAATAAGCGGCTTCCGGTGAACAAAATTGCTCATTTCAGAAGAGATTTTGGGCTTCCACTCGATTTTCGAGCAAAATGGGTGGAAAATTACCCTGAACTATTTAGGGTGGTGAAGTCTGAGGATGAATGTGAATATTTGGAGCTTGTTTCTTGGAATCCTGCTTGGGCTGTGACGGAGTTGGAGAAGAAGTTCATGGATGTGACTGAGAGCACTGCTACTCATACCCCAGGTTTGCTTTCACTTCCTTTTCCCATGAGATTTCCTTCCAATTACAAGAAGATGTATAGATATAGAGGGAAAATTGATCACTTTCAAAAAAGGTCTTATTTGTCTCCATATGCCGATGCAAGTGGGCTAAAAGCTGGTTCACTTGAATTTGATAAAAGGGCTATTGCTGTTATGCACGAGTTGCTTAGCTTTACCATGGAGAAGAGACTCGTTACTGATCACCTTACCCACTTTAGGCAGGAACTTGTGATGCCTCAAAAGCTAATGAGACTTCTTTTGAAGCATGTTGGGATATTTTATGTTTCAGAGAGGGGTAAAAGATTTAGTGTTTTCTTGACAGAAGCTTATGAAGGCCCGGAGTTGATTGATAAATGCCCTTTGGTTCTTTGGAAGGAGAAGGTATTGAGCCACGTTGGTTATAGAAGAAAGAAAAAGAAGATCGAAACTTTTAGTGACATGTCTGAAATGGAGGAGGATAACAATTTGGTTTTGGCTAAGGATGACTCTGAGCAGGATATGGAGGATACTGGTTGTTCAGAAGAGACATTAGATGCAAATACAGTTGACATGGAAACTAGGGATCTCCTTTTTGAGTAAAAGGAATCTGAATCTTCATGAGCATCAATTTAATTTGATTTTTTTTCATAGATTTCTGGAGGAAAGAAACCAACGGTTTTGTTCAATGGAGCATAGTGTGATCCTGATCTCCTATTTAGGAGCAATATGTGTATCTTATCGTATGTACGCAGTATGTAACAGTTAATTTCTGCTCTATCAATGTTCCTCTTGGCCCTACAGCTGAAGGAGTTTCATTTGATCAGAAAAATGAAACAAGCATTTCTCTGGTTGAATCTTACTGATGC

mRNA sequence

ATGGCTGCTTGGATTGCCAATTCTTCTAAAGCCCTAATCTCGAACGAGTACAATGCTAATCATTCTCGCTTTCTTCAGTTTTTTAACCTGAACGAACTCGCAAATTATCTATGCAGAAATAGTTTTGTGGAGTCGTGGTCATGGTCGCAAATCCGGTTGATGACAACCAGTAAACGCGTTCAGGATAGAAGCCGCTTTAAGAGAGTGCAGGATCTTGAAATGGCGACGGAGAAGTGGAAGGTAGCTCACAAGGTACTTTTCTTGATTGAAACTCTCAAGGAAGAGCCTGAGATGATAATTCCCGTTAGGGATTTAGAGCGATATCGTAGAAAAATTAATCTTCCGAAACCACATAGGATCTCAGAATTCATTCGAAAATCGCCTGAACTGTTTGAATTATACAAGGATCAGAGGGGTGTGTTGTGGTGTGGATTGACTAAACAAGCCGAAGATTTGGTGGAAGAGGAGAATAAGATAATTGAACAACACGCTGACAAAGTTGCCGAGTATGTTACCAGGTTTTTGATGATGTCAGTGAATAAGCGGCTTCCGGTGAACAAAATTGCTCATTTCAGAAGAGATTTTGGGCTTCCACTCGATTTTCGAGCAAAATGGGTGGAAAATTACCCTGAACTATTTAGGGTGGTGAAGTCTGAGGATGAATGTGAATATTTGGAGCTTGTTTCTTGGAATCCTGCTTGGGCTGTGACGGAGTTGGAGAAGAAGTTCATGGATGTGACTGAGAGCACTGCTACTCATACCCCAGGTTTGCTTTCACTTCCTTTTCCCATGAGATTTCCTTCCAATTACAAGAAGATGTATAGATATAGAGGGAAAATTGATCACTTTCAAAAAAGGTCTTATTTGTCTCCATATGCCGATGCAAGTGGGCTAAAAGCTGGTTCACTTGAATTTGATAAAAGGGCTATTGCTGTTATGCACGAGTTGCTTAGCTTTACCATGGAGAAGAGACTCGTTACTGATCACCTTACCCACTTTAGGCAGGAACTTGTGATGCCTCAAAAGCTAATGAGACTTCTTTTGAAGCATGTTGGGATATTTTATGTTTCAGAGAGGGGTAAAAGATTTAGTGTTTTCTTGACAGAAGCTTATGAAGGCCCGGAGTTGATTGATAAATGCCCTTTGGTTCTTTGGAAGGAGAAGGTATTGAGCCACGTTGGTTATAGAAGAAAGAAAAAGAAGATCGAAACTTTTAGTGACATGTCTGAAATGGAGGAGGATAACAATTTGGTTTTGGCTAAGGATGACTCTGAGCAGGATATGGAGGATACTGGTTGTTCAGAAGAGACATTAGATGCAAATACAGTTGACATGGAAACTAGGGATCTCCTTTTTGAGTAAAAGGAATCTGAATCTTCATGAGCATCAATTTAATTTGATTTTTTTTCATAGATTTCTGGAGGAAAGAAACCAACGGTTTTGTTCAATGGAGCATAGTGTGATCCTGATCTCCTATTTAGGAGCAATATGTGTATCTTATCGTATGTACGCAGTATGTAACAGTTAATTTCTGCTCTATCAATGTTCCTCTTGGCCCTACAGCTGAAGGAGTTTCATTTGATCAGAAAAATGAAACAAGCATTTCTCTGGTTGAATCTTACTGATGC

Coding sequence (CDS)

ATGGCTGCTTGGATTGCCAATTCTTCTAAAGCCCTAATCTCGAACGAGTACAATGCTAATCATTCTCGCTTTCTTCAGTTTTTTAACCTGAACGAACTCGCAAATTATCTATGCAGAAATAGTTTTGTGGAGTCGTGGTCATGGTCGCAAATCCGGTTGATGACAACCAGTAAACGCGTTCAGGATAGAAGCCGCTTTAAGAGAGTGCAGGATCTTGAAATGGCGACGGAGAAGTGGAAGGTAGCTCACAAGGTACTTTTCTTGATTGAAACTCTCAAGGAAGAGCCTGAGATGATAATTCCCGTTAGGGATTTAGAGCGATATCGTAGAAAAATTAATCTTCCGAAACCACATAGGATCTCAGAATTCATTCGAAAATCGCCTGAACTGTTTGAATTATACAAGGATCAGAGGGGTGTGTTGTGGTGTGGATTGACTAAACAAGCCGAAGATTTGGTGGAAGAGGAGAATAAGATAATTGAACAACACGCTGACAAAGTTGCCGAGTATGTTACCAGGTTTTTGATGATGTCAGTGAATAAGCGGCTTCCGGTGAACAAAATTGCTCATTTCAGAAGAGATTTTGGGCTTCCACTCGATTTTCGAGCAAAATGGGTGGAAAATTACCCTGAACTATTTAGGGTGGTGAAGTCTGAGGATGAATGTGAATATTTGGAGCTTGTTTCTTGGAATCCTGCTTGGGCTGTGACGGAGTTGGAGAAGAAGTTCATGGATGTGACTGAGAGCACTGCTACTCATACCCCAGGTTTGCTTTCACTTCCTTTTCCCATGAGATTTCCTTCCAATTACAAGAAGATGTATAGATATAGAGGGAAAATTGATCACTTTCAAAAAAGGTCTTATTTGTCTCCATATGCCGATGCAAGTGGGCTAAAAGCTGGTTCACTTGAATTTGATAAAAGGGCTATTGCTGTTATGCACGAGTTGCTTAGCTTTACCATGGAGAAGAGACTCGTTACTGATCACCTTACCCACTTTAGGCAGGAACTTGTGATGCCTCAAAAGCTAATGAGACTTCTTTTGAAGCATGTTGGGATATTTTATGTTTCAGAGAGGGGTAAAAGATTTAGTGTTTTCTTGACAGAAGCTTATGAAGGCCCGGAGTTGATTGATAAATGCCCTTTGGTTCTTTGGAAGGAGAAGGTATTGAGCCACGTTGGTTATAGAAGAAAGAAAAAGAAGATCGAAACTTTTAGTGACATGTCTGAAATGGAGGAGGATAACAATTTGGTTTTGGCTAAGGATGACTCTGAGCAGGATATGGAGGATACTGGTTGTTCAGAAGAGACATTAGATGCAAATACAGTTGACATGGAAACTAGGGATCTCCTTTTTGAGTAA

Protein sequence

MAAWIANSSKALISNEYNANHSRFLQFFNLNELANYLCRNSFVESWSWSQIRLMTTSKRVQDRSRFKRVQDLEMATEKWKVAHKVLFLIETLKEEPEMIIPVRDLERYRRKINLPKPHRISEFIRKSPELFELYKDQRGVLWCGLTKQAEDLVEEENKIIEQHADKVAEYVTRFLMMSVNKRLPVNKIAHFRRDFGLPLDFRAKWVENYPELFRVVKSEDECEYLELVSWNPAWAVTELEKKFMDVTESTATHTPGLLSLPFPMRFPSNYKKMYRYRGKIDHFQKRSYLSPYADASGLKAGSLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLMRLLLKHVGIFYVSERGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRRKKKKIETFSDMSEMEEDNNLVLAKDDSEQDMEDTGCSEETLDANTVDMETRDLLFE*

Homology

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BLAST of MELO3C016928 vs. Swiss-Prot
Match: RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 5.2e-38
Identity = 120/390 (30.77%), Postives = 198/390 (50.77%), Query Frame = 1


Query: 55  TTSKRVQDRSRFKRVQDLEMATEKWKVAHKVLFLIETLKEEPEMIIPVRDLERYRRKINL 114
           TT  + QDR R     D  M  EK K+  KV+     +  +P   I +  L+   R++ L
Sbjct: 38  TTIPKKQDRVR-DHGYDNYMEVEK-KI-RKVVKFHSLILSQPNHTIAISLLDTLARRLGL 97

Query: 115 P-KPHRISEFIRKSPELFELYKDQ-RGVLWCGLTKQAEDLVEEENKIIEQHADKVAEYVT 174
             K H    F+ K P +FE+Y+   + +L+C LT++A D +  E++ +    D++ + VT
Sbjct: 98  GFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAV---LDQIPDAVT 157

Query: 175 RF---LMMSVNKRLPVNKIAHFRRDFGLPLDFRAKWVENYPELFRVVKSEDECE-YLELV 234
           R    +MMS   R+ +  +   R +FGLP DF    +  +P+ FR++  E+  + Y+E+V
Sbjct: 158 RLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIV 217

Query: 235 SWNPAWAVTELEKKFMDVTESTATHTPGLLSLPFPMRFPSNYKKMYRYRGKIDHFQKRSY 294
             +P  ++  +E+   ++   T       +   F + FP  +K    +R  +  +Q+  Y
Sbjct: 218 EKDPNLSICAIER-VREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPY 277

Query: 295 LSPYADASGLKAGSLE----FDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLM 354
            SPY D SG    S+E     +KR++A +HELLS T+EK++  + + HFR  + +P+KL 
Sbjct: 278 WSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLK 337

Query: 355 RLLLKHVGIFYVSER---GKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRRKKKK 414
             LL+H GIFY+S R   GK  +VFL E Y+  EL++   + L + ++   V    +K K
Sbjct: 338 EFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAK 397

Query: 415 IETFSDMSEMEEDNNLVLAKD--DSEQDME 430
           +           D  LV  +D  D E D+E
Sbjct: 398 V-----------DAELVRYRDGLDDEDDVE 409

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BLAST of MELO3C016928 vs. TrEMBL
Match: A0A0A0L0X8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G649630 PE=4 SV=1)

HSP 1 Score: 850.5 bits (2196), Expect = 9.3e-244
Identity = 420/452 (92.92%), Postives = 435/452 (96.24%), Query Frame = 1


Query: 2   AAWIANSSKALISNEYNANHSRFLQFFNLNELANYLCRNSFVESWSWSQIRLMTTSKRVQ 61
           A  IANS K LISNEYN N+SR LQFFNLNEL NYLCRN FVE WSWSQIRLMTTSKRVQ
Sbjct: 4   AVRIANSVKVLISNEYNVNYSRLLQFFNLNELPNYLCRNRFVELWSWSQIRLMTTSKRVQ 63

Query: 62  DRSRFKRVQDLEMATEKWKVAHKVLFLIETLKEEPEMIIPVRDLERYRRKINLPKPHRIS 121
           DRS+FKRVQDLE+ATEKWKVAHKVLFLIETLKEEPEMIIPVR+LERYRRKINLPKPHRIS
Sbjct: 64  DRSQFKRVQDLELATEKWKVAHKVLFLIETLKEEPEMIIPVRNLERYRRKINLPKPHRIS 123

Query: 122 EFIRKSPELFELYKDQRGVLWCGLTKQAEDLVEEENKIIEQHADKVAEYVTRFLMMSVNK 181
           +FIRKSPE+FELYKDQRGVLWCGLTKQA+DLVEEENKI+EQHADKVAEYVTRFLMMSVNK
Sbjct: 124 DFIRKSPEMFELYKDQRGVLWCGLTKQADDLVEEENKIVEQHADKVAEYVTRFLMMSVNK 183

Query: 182 RLPVNKIAHFRRDFGLPLDFRAKWVENYPELFRVVKSEDECEYLELVSWNPAWAVTELEK 241
           RLPV+KIAHFRRDFGLPLDFRAKWV+NYPELFRVVKSEDECEYLELVSWNPAWAVTELEK
Sbjct: 184 RLPVDKIAHFRRDFGLPLDFRAKWVKNYPELFRVVKSEDECEYLELVSWNPAWAVTELEK 243

Query: 242 KFMDVTESTATHTPGLLSLPFPMRFPSNYKKMYRYRGKIDHFQKRSYLSPYADASGLKAG 301
           KFM  TESTATHTPGLLSLPFP++FPSNYKKMYRYRGKID FQKRSYLSPYADASGLKAG
Sbjct: 244 KFMGATESTATHTPGLLSLPFPLKFPSNYKKMYRYRGKIDQFQKRSYLSPYADASGLKAG 303

Query: 302 SLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLMRLLLKHVGIFYVSERGK 361
           SLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLMRLLLKHVGIFYVSERGK
Sbjct: 304 SLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLMRLLLKHVGIFYVSERGK 363

Query: 362 RFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRRKKKKIETFSDMSEMEEDNNLVLAK 421
           RFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYR KKKKI+TF+DMSEMEEDNNL+LA 
Sbjct: 364 RFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRAKKKKIKTFNDMSEMEEDNNLLLAD 423

Query: 422 DDSEQDMEDTGCSEET-LDANTVDMETRDLLF 453
           DDSEQDMEDTGCSEET LDANTVDMETRD  F
Sbjct: 424 DDSEQDMEDTGCSEETSLDANTVDMETRDRHF 455

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BLAST of MELO3C016928 vs. TrEMBL
Match: M5WBU2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018971mg PE=4 SV=1)

HSP 1 Score: 580.5 bits (1495), Expect = 1.8e-162
Identity = 284/395 (71.90%), Postives = 332/395 (84.05%), Query Frame = 1


Query: 54  MTTSKRVQDRSRFKRVQDLEMATEKWKVAHKVLFLIETLKEEPEMIIPVRDLERYRRKIN 113
           MTTSKRVQDRS+ KRV DLE+ TEKWK+A KVLFL+E LK+EPEMIIPVR L++YR +I+
Sbjct: 1   MTTSKRVQDRSKLKRVHDLEIVTEKWKIASKVLFLMEILKKEPEMIIPVRSLDQYRSQIS 60

Query: 114 LPKPHRISEFIRKSPELFELYKDQRGVLWCGLTKQAEDLVEEENKIIEQHADKVAEYVTR 173
           LPKPHR+S+FIRKSP+LFELYKD R VLWCG+TK+AEDLVEEE++I+E+H DK AEYVTR
Sbjct: 61  LPKPHRVSDFIRKSPKLFELYKDHRRVLWCGMTKKAEDLVEEEDRILEEHQDKAAEYVTR 120

Query: 174 FLMMSVNKRLPVNKIAHFRRDFGLPLDFRAKWVENYPELFRVVKSEDECEYLELVSWNPA 233
           FLMMSV+KRL ++KI HFRRDF LP+DFR  WV  YP+ F++VK E+  EYLELV+WNPA
Sbjct: 121 FLMMSVDKRLALDKIVHFRRDFALPVDFRTGWVHKYPQHFKLVKDEEGLEYLELVNWNPA 180

Query: 234 WAVTELEKKFMDVTESTATHTPGLLSLPFPMRFPSNYKKMYRYRGKIDHFQKRSYLSPYA 293
           WA+TELEKK M +TE++  HTPGLLS+ FP++FP NYKK Y+YRG IDHFQKRSYLSPYA
Sbjct: 181 WAITELEKKTMGITEASEDHTPGLLSISFPLKFPPNYKKAYKYRGAIDHFQKRSYLSPYA 240

Query: 294 DASGLKAGSLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLMRLLLKHVGI 353
           DA GLKAGS EFDKRA+A+MHELLSFT+EKRLVTDHLTHFR ELVMPQKLMRLLLKH GI
Sbjct: 241 DARGLKAGSKEFDKRAVAIMHELLSFTVEKRLVTDHLTHFRHELVMPQKLMRLLLKHFGI 300

Query: 354 FYVSERGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRRKKKKIETFSDMSEME- 413
           FYVSERGKRFSVFL EAYEG ELI+K PLVLWKEKV S +GY R KKKIE FSDMS+ME 
Sbjct: 301 FYVSERGKRFSVFLKEAYEGSELIEKSPLVLWKEKVQSLIGY-RGKKKIENFSDMSDMED 360

Query: 414 ----------EDNNLVLAKDDSEQDMEDTGCSEET 438
                     ED +L   ++++E DMED    + +
Sbjct: 361 NGFDESQSENEDIDLQSEQEETEGDMEDDSLGDNS 394

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BLAST of MELO3C016928 vs. TrEMBL
Match: M4CDU9_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 578.2 bits (1489), Expect = 8.9e-162
Identity = 278/394 (70.56%), Postives = 336/394 (85.28%), Query Frame = 1


Query: 51  IRLMTTSKRVQDRSRFKRVQDLEMATEKWKVAHKVLFLIETLKEEPEMIIPVRDLERYRR 110
           +RLMT+SKRVQDRSR KRV++LE+ATEKWK+A+KV+FL+E LK EPEMI+ VR LE+YRR
Sbjct: 39  VRLMTSSKRVQDRSREKRVRELEVATEKWKIANKVMFLMELLKSEPEMIMKVRLLEQYRR 98

Query: 111 KINLPKPHRISEFIRKSPELFELYKDQRGVLWCGLTKQAEDLVEEENKIIEQHADKVAEY 170
           +INLPKPH+IS+FIRKSP+LFELYKD+RGVLWCG+TK+ E+L+EE + ++E++ DK AE+
Sbjct: 99  QINLPKPHKISDFIRKSPKLFELYKDERGVLWCGMTKEGEELLEEHDGLVEENGDKAAEH 158

Query: 171 VTRFLMMSVNKRLPVNKIAHFRRDFGLPLDFRAKWVENYPELFRVVKSEDECEYLELVSW 230
           VTR LMMSV+K+L ++KIAHFRRDFGLPLDFR  WV  +PELF+VVK ED  EYLELVSW
Sbjct: 159 VTRCLMMSVDKKLRLDKIAHFRRDFGLPLDFRVNWVNKFPELFKVVKVEDGEEYLELVSW 218

Query: 231 NPAWAVTELEKKFMDVTESTATHTPGLLSLPFPMRFPSNYKKMYRYRGKIDHFQKRSYLS 290
           NPAWA+TELEKK + +TE  + H PGLLSLPFPM+FP +YKKMYRYRGKI+HFQKR+YLS
Sbjct: 219 NPAWAITELEKKTLGLTEE-SDHKPGLLSLPFPMKFPPSYKKMYRYRGKIEHFQKRTYLS 278

Query: 291 PYADASGLKAGSLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLMRLLLKH 350
           PYADA GL+AGS EFDKRAIAVMHELLSFT+EKRLVTDHLTHFR+E VMPQKLMR+ LKH
Sbjct: 279 PYADARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLKH 338

Query: 351 VGIFYVSERGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRRKKKKIETFSDMSE 410
            GIFYVSERGKRFSVFLTEAYEGPELI+KCPL+LWKEK+L   GYR +K+ I+T+SD  E
Sbjct: 339 CGIFYVSERGKRFSVFLTEAYEGPELIEKCPLILWKEKLLRFTGYRGRKRDIQTYSDTLE 398

Query: 411 MEEDNNLVLAKDDSEQDMEDTGCSEETLDANTVD 445
           MEE   L  +    + D +     ++ +D   V+
Sbjct: 399 MEEKELLYSSSSGDDDDDDMMSDDDDEMDIGEVN 431

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BLAST of MELO3C016928 vs. TrEMBL
Match: A0A078DSZ5_BRANA (BnaA10g14300D protein OS=Brassica napus GN=BnaA10g14300D PE=4 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 1.2e-161
Identity = 280/397 (70.53%), Postives = 339/397 (85.39%), Query Frame = 1


Query: 51  IRLMTTSKRVQDRSRFKRVQDLEMATEKWKVAHKVLFLIETLKEEPEMIIPVRDLERYRR 110
           +RLMT+SKRVQDRSR KRV++LE+ATEKWK+A+KV+FL+E LK EPEMI+ VR LE+YRR
Sbjct: 39  VRLMTSSKRVQDRSREKRVRELEVATEKWKIANKVMFLMELLKSEPEMIMKVRLLEQYRR 98

Query: 111 KINLPKPHRISEFIRKSPELFELYKDQRGVLWCGLTKQAEDLVEEENKIIEQHADKVAEY 170
           +INLPKPH+IS+FIRKSP+LFELYKD+RGVLWCG+TK+ E+L+EE + ++E++ DK AE+
Sbjct: 99  QINLPKPHKISDFIRKSPKLFELYKDERGVLWCGMTKEGEELLEEHDGLVEENGDKAAEH 158

Query: 171 VTRFLMMSVNKRLPVNKIAHFRRDFGLPLDFRAKWVENYPELFRVVKSEDECEYLELVSW 230
           VTR LMMSV+K+L ++KIAHFRRDFGLPLDFR  WV  +PELF+VVK ED  EYLELVSW
Sbjct: 159 VTRCLMMSVDKKLRLDKIAHFRRDFGLPLDFRVNWVNKFPELFKVVKVEDGEEYLELVSW 218

Query: 231 NPAWAVTELEKKFMDVTESTATHTPGLLSLPFPMRFPSNYKKMYRYRGKIDHFQKRSYLS 290
           NPAWA+TELEKK + +TE  + H PGLLSLPFPM+FP +YKKMYRYRGKI+HFQKR+YLS
Sbjct: 219 NPAWAITELEKKTLGLTEE-SDHKPGLLSLPFPMKFPPSYKKMYRYRGKIEHFQKRTYLS 278

Query: 291 PYADASGLKAGSLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLMRLLLKH 350
           PYADA GL+AGS EFDKRAIAVMHELLSFT+EKRLVTDHLTHFR+E VMPQKLMR+ LKH
Sbjct: 279 PYADARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLKH 338

Query: 351 VGIFYVSERGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRRKKKKIETFSDMSE 410
            GIFYVSERGKRFSVFLTEAYEGPELI+KCPL+LWKEK+L   GYR +K+ I+T+SD  E
Sbjct: 339 CGIFYVSERGKRFSVFLTEAYEGPELIEKCPLILWKEKLLRFTGYRGRKRDIQTYSDTLE 398

Query: 411 MEE-----------DNNLVLAKDDSEQDMEDTGCSEE 437
           MEE           D++ +++ DD E D+ +   + E
Sbjct: 399 MEEKELLYSSSSGGDDDDMMSDDDDEMDIGEVNDAYE 434

[Close]

BLAST of MELO3C016928 vs. TrEMBL
Match: A0A078FUE6_BRANA (BnaC09g36620D protein OS=Brassica napus GN=BnaC09g36620D PE=4 SV=1)

HSP 1 Score: 575.9 bits (1483), Expect = 4.4e-161
Identity = 280/396 (70.71%), Postives = 337/396 (85.10%), Query Frame = 1


Query: 51  IRLMTTSKRVQDRSRFKRVQDLEMATEKWKVAHKVLFLIETLKEEPEMIIPVRDLERYRR 110
           +RLMT+SKRVQDRSR KRV++LE+ATEKWK+A+KV+FL+E LK EPEMI+ VR LE+YRR
Sbjct: 39  VRLMTSSKRVQDRSREKRVRELEVATEKWKIANKVMFLMELLKSEPEMIMKVRLLEQYRR 98

Query: 111 KINLPKPHRISEFIRKSPELFELYKDQRGVLWCGLTKQAEDLVEEENKIIEQHADKVAEY 170
           +INLPKPH+IS+FIRKSP+LFELYKD+RGVLWCG+TK+ EDL++E + ++E++ DK AE+
Sbjct: 99  QINLPKPHKISDFIRKSPKLFELYKDERGVLWCGMTKEGEDLLDEHDGLVEENGDKAAEH 158

Query: 171 VTRFLMMSVNKRLPVNKIAHFRRDFGLPLDFRAKWVENYPELFRVVKSEDECEYLELVSW 230
           VTR LMMSV+K+L ++KIAHFRRDFGLPLDFR  WV  +PELF+VVK ED  EYLELVSW
Sbjct: 159 VTRCLMMSVDKKLRLDKIAHFRRDFGLPLDFRVNWVNKFPELFKVVKVEDGEEYLELVSW 218

Query: 231 NPAWAVTELEKKFMDVTESTATHTPGLLSLPFPMRFPSNYKKMYRYRGKIDHFQKRSYLS 290
           NPAWA+TELEKK + +TE  + H PGLLSLPFPM FP +YKKMYRYRGKI+HFQKR+YLS
Sbjct: 219 NPAWAITELEKKTLGLTEE-SDHKPGLLSLPFPMNFPPSYKKMYRYRGKIEHFQKRAYLS 278

Query: 291 PYADASGLKAGSLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLMRLLLKH 350
           PYADA GL+AGS EFDKRAIAVMHELLSFT+EKRLVTDHLTHFR+E VMPQKLMR+ LKH
Sbjct: 279 PYADARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLKH 338

Query: 351 VGIFYVSERGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRRKKKKIETFSDMSE 410
            GIFYVSERGKRFSVFLTEAYEG ELI+KCPL+LWKEK+L   GYR +K+ I+TFSD  E
Sbjct: 339 CGIFYVSERGKRFSVFLTEAYEGTELIEKCPLILWKEKLLRFTGYRGRKRDIQTFSDTLE 398

Query: 411 MEEDNNLVLAKDDSEQDMEDTGCSEETLDANTVDME 447
           MEE   L+     S  D +D    ++  D + +D++
Sbjct: 399 MEE-RELLYRSSSSGDDDDDMISDDDDDDDDEMDID 432

[Close]

BLAST of MELO3C016928 vs. TAIR10
Match: AT5G21970.1 (AT5G21970.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 563.9 bits (1452), Expect = 8.8e-161
Identity = 277/413 (67.07%), Postives = 331/413 (80.15%), Query Frame = 1


Query: 40  NSFVESWSWSQIRLMTTSKRVQDRSRFKRVQDLEMATEKWKVAHKVLFLIETLKEEPEMI 99
           +SF   W    +R MT+SKRVQDRSR KRVQ+LE+ATEKWK+A KV+FL+E LK E +MI
Sbjct: 33  SSFRRVW----VRFMTSSKRVQDRSREKRVQELEIATEKWKIASKVIFLMEVLKGERDMI 92

Query: 100 IPVRDLERYRRKINLPKPHRISEFIRKSPELFELYKDQRGVLWCGLTKQAEDLVEEENKI 159
           + VR  E+YRR+INLPKPH+IS+FIRKSP+LFELYKDQRGVLWCGLT+  EDL++E +K+
Sbjct: 93  MTVRSFEQYRRQINLPKPHKISDFIRKSPKLFELYKDQRGVLWCGLTEGGEDLLDEHDKL 152

Query: 160 IEQHADKVAEYVTRFLMMSVNKRLPVNKIAHFRRDFGLPLDFRAKWVENYPELFRVVKSE 219
           +E++ DK AE+VTR LMMSV+K+LP++KI HFRRDFGLPLDFR  WV N+P+ F+VVK  
Sbjct: 153 LEENGDKAAEHVTRCLMMSVDKKLPLDKIVHFRRDFGLPLDFRINWVYNFPQHFKVVKLG 212

Query: 220 DECEYLELVSWNPAWAVTELEKKFMDVTESTATHTPGLLSLPFPMRFPSNYKKMYRYRGK 279
           D  EYLELVSWNPAWA+TELEKK + +TE    H PG+LSL FPM+FP +YKKMYRYRGK
Sbjct: 213 DGEEYLELVSWNPAWAITELEKKTLGITED-CEHKPGMLSLAFPMKFPPSYKKMYRYRGK 272

Query: 280 IDHFQKRSYLSPYADASGLKAGSLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVM 339
           I+HFQKRSYLSPYADA GL+AGS EFDKRAIAVMHELLSFT+EKRLVTDHLTHFR+E VM
Sbjct: 273 IEHFQKRSYLSPYADARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVM 332

Query: 340 PQKLMRLLLKHVGIFYVSERGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRRKK 399
           PQKLMR+ LKH GIFYVSERGKRFSVFLTE YEGPELI+KCPL+LWKEK+L   GYR +K
Sbjct: 333 PQKLMRIFLKHCGIFYVSERGKRFSVFLTEGYEGPELIEKCPLILWKEKLLKFTGYRGRK 392

Query: 400 KKIETFSDMSEMEEDNNLVLAKDD--------SEQDMEDTGCSEETLDANTVD 445
           + I+T+SD  +MEE   L     D         + D +D    ++ +D   V+
Sbjct: 393 RDIQTYSDTLDMEERELLESGSGDEDLSVGFEKDGDYDDVVTDDDEMDIGEVN 440

[Close]

BLAST of MELO3C016928 vs. TAIR10
Match: AT4G01037.1 (AT4G01037.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 204.9 bits (520), Expect = 1.0e-52
Identity = 133/380 (35.00%), Postives = 203/380 (53.42%), Query Frame = 1


Query: 63  RSRFKRVQDL--EMATEKWKVAHKVLFLIETLKEEPEMIIPVRDLERYRRKINLPKPHRI 122
           R+  KR ++L  +   ++ K    VL + + L  +P+ ++ +R L +YRR + L K  R 
Sbjct: 73  RAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRF 132

Query: 123 SEFIRKSPELFELYKDQRGVLWCGLTKQAEDLVEEENKIIEQHADKVAEYVTRFLMMSVN 182
              +RK P +FE+ ++    L   +T +AE L  +E +I  +  D +   + + +MMS++
Sbjct: 133 IALLRKYPGVFEIVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSID 192

Query: 183 KRLPVNKIAHFRRDFGLPLDFRAKWVENYPELFRVVKSEDECEYLELVSWNPAWAVTELE 242
           KR+ + KI+H + D GLPL+FR    + YP+ FRVV +      LEL  W+P  AV+  E
Sbjct: 193 KRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTP-RGPALELTHWDPELAVSAAE 252

Query: 243 KKFMDVTESTATHTPGLLSLPFP---MRFPSNYKKMYRYRGKIDHFQKRSYLSPYADASG 302
               D     +     ++  P     ++ P           KI  F+   Y+SPY D S 
Sbjct: 253 LSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSH 312

Query: 303 LKAGSLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLMRLLLKHVGIFYVS 362
           L++G+LE +K A  V+HELLS T EKR + DHLTHFR+E    Q+L  +L++H  +FYVS
Sbjct: 313 LRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVS 372

Query: 363 ERGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRRKKKKIETFSDMS--EMEEDN 422
            +G+R SVFL EAY   ELIDK PL L KEK+ + V   R  ++     D    E+E D 
Sbjct: 373 LKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKDEEGREVEIDG 432

Query: 423 NLVLAKDDSEQDMEDTGCSE 436
               +  D E++ E++   E
Sbjct: 433 ----SDADGEEEEEESDAEE 447

[Close]

BLAST of MELO3C016928 vs. TAIR10
Match: AT3G63090.1 (AT3G63090.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 171.0 bits (432), Expect = 1.7e-42
Identity = 114/384 (29.69%), Postives = 197/384 (51.30%), Query Frame = 1


Query: 50  QIRLMTTSKRVQDRSRFKRVQDLEMATEKWKVAHKVLFLIETLKEEPEMIIPVRDLERYR 109
           QIR +++ K V     +K+   L+ A E+ K       +++ +  EP  +IP+R LE+ R
Sbjct: 27  QIRWISSLKVV-----WKKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEKRR 86

Query: 110 RKINLPKPHRISEFIRKSPELFELYKDQ-----RGVLWCGLTKQAEDLVEEENKIIEQHA 169
            ++ L    +   F+  +P LFE+Y D+       V +   T +    ++EE +I  ++ 
Sbjct: 87  ERLRLT--FKAKSFVEMNPSLFEIYYDRIKPKSDPVQFLRPTPRLRAFLDEEQRIYSENE 146

Query: 170 DKVAEYVTRFLMMSVNKRLPVNKIAHFRRDFGLPLDFRAKWVENYPELFRVVKSEDECE- 229
             +   + + LMM+ +K +  +K+ H +RDFG P DF  K V+ YP  FR+    +E + 
Sbjct: 147 PLLVSKLCQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLTGLPEEGKS 206

Query: 230 YLELVSWNPAWAVTELEKKFMDVTESTATHTPGLLSLPFPMRFPSNYKKMYRYRGKIDHF 289
           +LELVSWNP +A +++E +  D T  T       +   + ++ PS +      R     +
Sbjct: 207 FLELVSWNPDFAKSKIELRAEDETLKTGVR----IRPNYNVKLPSGFFLRKEMREWTRDW 266

Query: 290 QKRSYLSPYADASGLKAGSLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKL 349
            ++ Y+SPY D S L   S E +KR + V+HELLS ++ KR+    L  F  E       
Sbjct: 267 LEQDYISPYEDVSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKFCDEFRFSNAF 326

Query: 350 MRLLLKHVGIFYVSERGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLS--HVGYRRKKKK 409
             +  +H GIFY+S +G   +  L EAY+  EL+D+ PL+  K+K L     G++ +K +
Sbjct: 327 SSVFTRHSGIFYLSLKGGIKTAVLREAYKDDELVDRDPLLAIKDKFLRLLEEGWQERKDR 386

Query: 410 IETFSDMSEMEEDNNLVLAKDDSE 426
           ++      ++++D  ++LA   +E
Sbjct: 387 LKL--QREQVQKDREMMLAAKSNE 397

[Close]

BLAST of MELO3C016928 vs. TAIR10
Match: AT4G08940.1 (AT4G08940.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 169.1 bits (427), Expect = 6.3e-42
Identity = 103/325 (31.69%), Postives = 171/325 (52.62%), Query Frame = 1


Query: 90  ETLKEEPEMIIPVRDLERYRRKINLPKPHRISEFIRKSPELFELYKDQRGVLWCGLTKQA 149
           E + ++PE I+ + D  +  R++  P+  ++++FI K P +F+ Y+   G +W G T+  
Sbjct: 89  EFISKQPERILRLDDAGKLYRELGFPRGRKVTKFIPKHPLIFQTYRHSDGKIWLGFTEFM 148

Query: 150 EDLVEEENKIIEQHADKVAEYVTRFLMMSVNKRLPVNKIAHFRRDFGLPLDFRAKWVENY 209
           EDL++EE  ++E         V + LMM+ +KR+ ++KI H R  FG+P DFR + V  Y
Sbjct: 149 EDLLDEEKGLMESMELDRVNCVRKLLMMTKDKRILLSKIHHTRLLFGIPEDFRDR-VAKY 208

Query: 210 PELFRVVKSEDECEYLELVSWNPAWAVTELEKKFMDVTESTATHTPGLLSLPFPMRFPSN 269
           P+ FRVV   D    LELV+W+   AV+ELE+ FM + E  A          FP++    
Sbjct: 209 PDYFRVVTGGDGNRVLELVNWDTNLAVSELERLFM-IDEDKAKRV-----FKFPVKHGKE 268

Query: 270 YKKMYRYRGKIDHFQKRSYLSPYADASGLKAGSLEFDKRAIAVMHELLSFTMEKRLVTDH 329
            +   +   K++       +SPY+D   L   SLE +K  + ++HE L+ T+EKR    H
Sbjct: 269 LELEEKDTRKLNLLNTFPLVSPYSDGWKLDVWSLEAEKYRVGIVHEFLNLTLEKRASIHH 328

Query: 330 LTHFRQELVMPQKLMRLLLKHVGIFYVSERGKRFSVFLTEAY-EGPELIDKCPLVLWKEK 389
           +  F+ E  + ++  ++L K    FY++     ++VFL +AY E   L+ K P V++ EK
Sbjct: 329 IVEFKDEFSLTRQTYQMLKKQSMSFYLAGTEMNWTVFLKDAYDENGVLVSKDPQVVFNEK 388

Query: 390 VLSHVGYRRKKKKIETFSDMSEMEE 414
           +               ++DM +ME+
Sbjct: 389 LYK-------------YADMQQMEQ 393

[Close]

BLAST of MELO3C016928 vs. TAIR10
Match: AT4G33495.1 (AT4G33495.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 160.2 bits (404), Expect = 2.9e-39
Identity = 120/390 (30.77%), Postives = 198/390 (50.77%), Query Frame = 1


Query: 55  TTSKRVQDRSRFKRVQDLEMATEKWKVAHKVLFLIETLKEEPEMIIPVRDLERYRRKINL 114
           TT  + QDR R     D  M  EK K+  KV+     +  +P   I +  L+   R++ L
Sbjct: 38  TTIPKKQDRVR-DHGYDNYMEVEK-KI-RKVVKFHSLILSQPNHTIAISLLDTLARRLGL 97

Query: 115 P-KPHRISEFIRKSPELFELYKDQ-RGVLWCGLTKQAEDLVEEENKIIEQHADKVAEYVT 174
             K H    F+ K P +FE+Y+   + +L+C LT++A D +  E++ +    D++ + VT
Sbjct: 98  GFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAV---LDQIPDAVT 157

Query: 175 RF---LMMSVNKRLPVNKIAHFRRDFGLPLDFRAKWVENYPELFRVVKSEDECE-YLELV 234
           R    +MMS   R+ +  +   R +FGLP DF    +  +P+ FR++  E+  + Y+E+V
Sbjct: 158 RLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIV 217

Query: 235 SWNPAWAVTELEKKFMDVTESTATHTPGLLSLPFPMRFPSNYKKMYRYRGKIDHFQKRSY 294
             +P  ++  +E+   ++   T       +   F + FP  +K    +R  +  +Q+  Y
Sbjct: 218 EKDPNLSICAIER-VREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPY 277

Query: 295 LSPYADASGLKAGSLE----FDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLM 354
            SPY D SG    S+E     +KR++A +HELLS T+EK++  + + HFR  + +P+KL 
Sbjct: 278 WSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLK 337

Query: 355 RLLLKHVGIFYVSER---GKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRRKKKK 414
             LL+H GIFY+S R   GK  +VFL E Y+  EL++   + L + ++   V    +K K
Sbjct: 338 EFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRKAK 397

Query: 415 IETFSDMSEMEEDNNLVLAKD--DSEQDME 430
           +           D  LV  +D  D E D+E
Sbjct: 398 V-----------DAELVRYRDGLDDEDDVE 409

[Close]

BLAST of MELO3C016928 vs. NCBI nr
Match: gi|659104080|ref|XP_008452800.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 916.8 bits (2368), Expect = 1.5e-263
Identity = 453/453 (100.00%), Postives = 453/453 (100.00%), Query Frame = 1


Query: 1   MAAWIANSSKALISNEYNANHSRFLQFFNLNELANYLCRNSFVESWSWSQIRLMTTSKRV 60
           MAAWIANSSKALISNEYNANHSRFLQFFNLNELANYLCRNSFVESWSWSQIRLMTTSKRV
Sbjct: 3   MAAWIANSSKALISNEYNANHSRFLQFFNLNELANYLCRNSFVESWSWSQIRLMTTSKRV 62

Query: 61  QDRSRFKRVQDLEMATEKWKVAHKVLFLIETLKEEPEMIIPVRDLERYRRKINLPKPHRI 120
           QDRSRFKRVQDLEMATEKWKVAHKVLFLIETLKEEPEMIIPVRDLERYRRKINLPKPHRI
Sbjct: 63  QDRSRFKRVQDLEMATEKWKVAHKVLFLIETLKEEPEMIIPVRDLERYRRKINLPKPHRI 122

Query: 121 SEFIRKSPELFELYKDQRGVLWCGLTKQAEDLVEEENKIIEQHADKVAEYVTRFLMMSVN 180
           SEFIRKSPELFELYKDQRGVLWCGLTKQAEDLVEEENKIIEQHADKVAEYVTRFLMMSVN
Sbjct: 123 SEFIRKSPELFELYKDQRGVLWCGLTKQAEDLVEEENKIIEQHADKVAEYVTRFLMMSVN 182

Query: 181 KRLPVNKIAHFRRDFGLPLDFRAKWVENYPELFRVVKSEDECEYLELVSWNPAWAVTELE 240
           KRLPVNKIAHFRRDFGLPLDFRAKWVENYPELFRVVKSEDECEYLELVSWNPAWAVTELE
Sbjct: 183 KRLPVNKIAHFRRDFGLPLDFRAKWVENYPELFRVVKSEDECEYLELVSWNPAWAVTELE 242

Query: 241 KKFMDVTESTATHTPGLLSLPFPMRFPSNYKKMYRYRGKIDHFQKRSYLSPYADASGLKA 300
           KKFMDVTESTATHTPGLLSLPFPMRFPSNYKKMYRYRGKIDHFQKRSYLSPYADASGLKA
Sbjct: 243 KKFMDVTESTATHTPGLLSLPFPMRFPSNYKKMYRYRGKIDHFQKRSYLSPYADASGLKA 302

Query: 301 GSLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLMRLLLKHVGIFYVSERG 360
           GSLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLMRLLLKHVGIFYVSERG
Sbjct: 303 GSLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLMRLLLKHVGIFYVSERG 362

Query: 361 KRFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRRKKKKIETFSDMSEMEEDNNLVLA 420
           KRFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRRKKKKIETFSDMSEMEEDNNLVLA
Sbjct: 363 KRFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRRKKKKIETFSDMSEMEEDNNLVLA 422

Query: 421 KDDSEQDMEDTGCSEETLDANTVDMETRDLLFE 454
           KDDSEQDMEDTGCSEETLDANTVDMETRDLLFE
Sbjct: 423 KDDSEQDMEDTGCSEETLDANTVDMETRDLLFE 455

[Close]

BLAST of MELO3C016928 vs. NCBI nr
Match: gi|449447369|ref|XP_004141441.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus])

HSP 1 Score: 850.5 bits (2196), Expect = 1.3e-243
Identity = 420/452 (92.92%), Postives = 435/452 (96.24%), Query Frame = 1


Query: 2   AAWIANSSKALISNEYNANHSRFLQFFNLNELANYLCRNSFVESWSWSQIRLMTTSKRVQ 61
           A  IANS K LISNEYN N+SR LQFFNLNEL NYLCRN FVE WSWSQIRLMTTSKRVQ
Sbjct: 4   AVRIANSVKVLISNEYNVNYSRLLQFFNLNELPNYLCRNRFVELWSWSQIRLMTTSKRVQ 63

Query: 62  DRSRFKRVQDLEMATEKWKVAHKVLFLIETLKEEPEMIIPVRDLERYRRKINLPKPHRIS 121
           DRS+FKRVQDLE+ATEKWKVAHKVLFLIETLKEEPEMIIPVR+LERYRRKINLPKPHRIS
Sbjct: 64  DRSQFKRVQDLELATEKWKVAHKVLFLIETLKEEPEMIIPVRNLERYRRKINLPKPHRIS 123

Query: 122 EFIRKSPELFELYKDQRGVLWCGLTKQAEDLVEEENKIIEQHADKVAEYVTRFLMMSVNK 181
           +FIRKSPE+FELYKDQRGVLWCGLTKQA+DLVEEENKI+EQHADKVAEYVTRFLMMSVNK
Sbjct: 124 DFIRKSPEMFELYKDQRGVLWCGLTKQADDLVEEENKIVEQHADKVAEYVTRFLMMSVNK 183

Query: 182 RLPVNKIAHFRRDFGLPLDFRAKWVENYPELFRVVKSEDECEYLELVSWNPAWAVTELEK 241
           RLPV+KIAHFRRDFGLPLDFRAKWV+NYPELFRVVKSEDECEYLELVSWNPAWAVTELEK
Sbjct: 184 RLPVDKIAHFRRDFGLPLDFRAKWVKNYPELFRVVKSEDECEYLELVSWNPAWAVTELEK 243

Query: 242 KFMDVTESTATHTPGLLSLPFPMRFPSNYKKMYRYRGKIDHFQKRSYLSPYADASGLKAG 301
           KFM  TESTATHTPGLLSLPFP++FPSNYKKMYRYRGKID FQKRSYLSPYADASGLKAG
Sbjct: 244 KFMGATESTATHTPGLLSLPFPLKFPSNYKKMYRYRGKIDQFQKRSYLSPYADASGLKAG 303

Query: 302 SLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLMRLLLKHVGIFYVSERGK 361
           SLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLMRLLLKHVGIFYVSERGK
Sbjct: 304 SLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLMRLLLKHVGIFYVSERGK 363

Query: 362 RFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRRKKKKIETFSDMSEMEEDNNLVLAK 421
           RFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYR KKKKI+TF+DMSEMEEDNNL+LA 
Sbjct: 364 RFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRAKKKKIKTFNDMSEMEEDNNLLLAD 423

Query: 422 DDSEQDMEDTGCSEET-LDANTVDMETRDLLF 453
           DDSEQDMEDTGCSEET LDANTVDMETRD  F
Sbjct: 424 DDSEQDMEDTGCSEETSLDANTVDMETRDRHF 455

[Close]

BLAST of MELO3C016928 vs. NCBI nr
Match: gi|1009134419|ref|XP_015884436.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Ziziphus jujuba])

HSP 1 Score: 614.0 bits (1582), Expect = 2.1e-172
Identity = 303/412 (73.54%), Postives = 353/412 (85.68%), Query Frame = 1


Query: 46  WSWS-QIRLMTTSKRVQDRSRFKRVQDLEMATEKWKVAHKVLFLIETLKEEPEMIIPVRD 105
           W W  Q RLMTTSKRVQDRS+ KRV DLE+ TEKWK+A KVLFL+E LK+EPEMIIPVR 
Sbjct: 19  WWWLIQNRLMTTSKRVQDRSKMKRVHDLEIVTEKWKIASKVLFLMEILKKEPEMIIPVRS 78

Query: 106 LERYRRKINLPKPHRISEFIRKSPELFELYKDQRGVLWCGLTKQAEDLVEEENKIIEQHA 165
           LE+YRR+INLPKPH++S+FIRKSP+LFELYKD RGVLWCG+TK AEDLVEEE +I+E + 
Sbjct: 79  LEQYRRQINLPKPHKVSDFIRKSPKLFELYKDHRGVLWCGMTKLAEDLVEEEERILEGNE 138

Query: 166 DKVAEYVTRFLMMSVNKRLPVNKIAHFRRDFGLPLDFRAKWVENYPELFRVVKSEDECEY 225
           +  AEYVTRFLMMSV+K LP++KIAHFRRDFGLP+DFR  WV  YP+ F+V K+EDE EY
Sbjct: 139 NNAAEYVTRFLMMSVDKMLPLDKIAHFRRDFGLPVDFRTSWVHKYPQHFKVAKNEDEAEY 198

Query: 226 LELVSWNPAWAVTELEKKFMDVTESTATHTPGLLSLPFPMRFPSNYKKMYRYRGKIDHFQ 285
           L+LV+WNPAWA+TELEKK M +TES A HTPGLLSLPFP++FP  YKK+YRY GKI+HFQ
Sbjct: 199 LKLVNWNPAWAITELEKKTMGITESVA-HTPGLLSLPFPLKFPPYYKKVYRYGGKIEHFQ 258

Query: 286 KRSYLSPYADASGLKAGSLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLM 345
           KR YLSPYADA GLKAGSLEFDKRA+AVMHELLSFT+EKRLVTDHLTHFR+ELVMPQKLM
Sbjct: 259 KRCYLSPYADARGLKAGSLEFDKRAVAVMHELLSFTIEKRLVTDHLTHFRRELVMPQKLM 318

Query: 346 RLLLKHVGIFYVSERGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRRKKKKIET 405
           RLLLKH+GIFYVSERGKRFSVFLTEAYEG ELI K PLVLWKEKV S +GYR KKKKIET
Sbjct: 319 RLLLKHIGIFYVSERGKRFSVFLTEAYEGSELIKKGPLVLWKEKVQSLIGYRGKKKKIET 378

Query: 406 FSDMSEMEEDNNLVLAKDDSE------QDMEDTGCSEETLDANTVDMETRDL 451
           F+DMS+M EDN+L+ +  ++E      +  ED GC E++L  +  +MET ++
Sbjct: 379 FTDMSDM-EDNDLLESDSENESVSLQLEQEEDLGCLEDSLPIDNAEMETEEV 428

[Close]

BLAST of MELO3C016928 vs. NCBI nr
Match: gi|645268413|ref|XP_008239517.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Prunus mume])

HSP 1 Score: 592.0 bits (1525), Expect = 8.6e-166
Identity = 291/406 (71.67%), Postives = 340/406 (83.74%), Query Frame = 1


Query: 43  VESWSWSQIRLMTTSKRVQDRSRFKRVQDLEMATEKWKVAHKVLFLIETLKEEPEMIIPV 102
           V SWS  Q R MTTSKRVQDRS+ KRV DLE+ TEKWK+A KVLFL+E LK+EPEMIIPV
Sbjct: 9   VGSWSKDQKRFMTTSKRVQDRSKLKRVHDLEIVTEKWKIASKVLFLMEILKKEPEMIIPV 68

Query: 103 RDLERYRRKINLPKPHRISEFIRKSPELFELYKDQRGVLWCGLTKQAEDLVEEENKIIEQ 162
           R L++YR +I+LPKPHR+S+FIRKSP+LFELYKD R VLWCG+TK+AEDLVEEE++I+E+
Sbjct: 69  RSLDQYRSQISLPKPHRVSDFIRKSPKLFELYKDHRRVLWCGMTKKAEDLVEEEDRILEE 128

Query: 163 HADKVAEYVTRFLMMSVNKRLPVNKIAHFRRDFGLPLDFRAKWVENYPELFRVVKSEDEC 222
           H DK AEYVTRFLMMSV+KRL ++KI HFRRDF LP+DFR  WV  YP+ F++VK E+  
Sbjct: 129 HQDKAAEYVTRFLMMSVDKRLALDKIVHFRRDFALPVDFRTGWVHKYPQHFKLVKDEEGL 188

Query: 223 EYLELVSWNPAWAVTELEKKFMDVTESTATHTPGLLSLPFPMRFPSNYKKMYRYRGKIDH 282
           EYLELV+WNPAWAVTELEKK M +TE++  HT GLLS+ FP++FP NYKK Y+YRG IDH
Sbjct: 189 EYLELVNWNPAWAVTELEKKTMGITEASEDHTQGLLSISFPLKFPPNYKKAYKYRGAIDH 248

Query: 283 FQKRSYLSPYADASGLKAGSLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQK 342
           FQKRSYLSPYADA GLKAGS EFDKRA+A+MHELLSFT+EKRLVTDHLTHFR+ELVMPQK
Sbjct: 249 FQKRSYLSPYADARGLKAGSKEFDKRAVAIMHELLSFTVEKRLVTDHLTHFRRELVMPQK 308

Query: 343 LMRLLLKHVGIFYVSERGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRRKKKKI 402
           LMRLLLKH GIFYVSERGKRFSVFL EAYEG ELI+K PLVLWKEKV S +GY R KKKI
Sbjct: 309 LMRLLLKHFGIFYVSERGKRFSVFLKEAYEGSELIEKSPLVLWKEKVQSLIGY-RGKKKI 368

Query: 403 ETFSDMSEME-----------EDNNLVLAKDDSEQDMEDTGCSEET 438
           ETFSDMS+ME           ED +L + ++++E DMED    + +
Sbjct: 369 ETFSDMSDMEDNGFDESQSENEDIDLQIEQEETESDMEDDSLGDNS 413

[Close]

BLAST of MELO3C016928 vs. NCBI nr
Match: gi|764607298|ref|XP_011467180.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 591.7 bits (1524), Expect = 1.1e-165
Identity = 289/391 (73.91%), Postives = 343/391 (87.72%), Query Frame = 1


Query: 41  SFVESWSWSQIRLMTTSKRVQDRSRFKRVQDLEMATEKWKVAHKVLFLIETLKEEPEMII 100
           S  E WS +Q R MTTSKRVQDRS+ KRV DLE+ TEKWK+A KVLFL+E LK+E EMI+
Sbjct: 11  SSAEWWSKNQNRFMTTSKRVQDRSKMKRVHDLEVVTEKWKIASKVLFLMELLKKELEMIM 70

Query: 101 PVRDLERYRRKINLPKPHRISEFIRKSPELFELYKDQRGVLWCGLTKQAEDLVEEENKII 160
           PVR L+++R +I+LPKPHR+S+FIRKSP+LFELYKD+RGVLWCG+T+QAE+LVEEE++I+
Sbjct: 71  PVRSLDKFRAQISLPKPHRMSDFIRKSPKLFELYKDRRGVLWCGMTEQAEELVEEEDRIL 130

Query: 161 EQHADKVAEYVTRFLMMSVNKRLPVNKIAHFRRDFGLPLDFRAKWVENYPELFRVVKSED 220
           E+H DK AEYVTRFLMMSV+KRL V+KIAH+RRDF LP DFR  WV  YP+ FR+V+  +
Sbjct: 131 EEHQDKAAEYVTRFLMMSVDKRLRVDKIAHYRRDFALPNDFRTTWVHKYPQYFRLVRDNE 190

Query: 221 ECEYLELVSWNPAWAVTELEKKFMDVTESTATHTPGLLSLPFPMRFPSNYKK-MYRYRGK 280
           + EYLELVSWNPAWA+TELEKK M VT+++A HTPGLL+LPFP++FP NYKK +Y+YRG 
Sbjct: 191 DIEYLELVSWNPAWAITELEKKTMGVTDASA-HTPGLLTLPFPLKFPPNYKKRVYKYRGA 250

Query: 281 IDHFQKRSYLSPYADASGLKAGSLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVM 340
           +DHFQKRSYLSPYADA GLKAGS EFDKRA+A+MHELLSFT+EKRLVTDHLTHFRQELVM
Sbjct: 251 LDHFQKRSYLSPYADARGLKAGSKEFDKRAVAIMHELLSFTVEKRLVTDHLTHFRQELVM 310

Query: 341 PQKLMRLLLKHVGIFYVSERGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRRKK 400
           PQKLMRL LKH GIFYVSERGKRFSVFLTEAYEG ELI+KCPLV+WKEKV S +GY RKK
Sbjct: 311 PQKLMRLFLKHFGIFYVSERGKRFSVFLTEAYEGSELIEKCPLVIWKEKVQSLIGY-RKK 370

Query: 401 KKIETFSDMSEMEEDNNLVLAKDDSEQDMED 431
           KKIETF+DMS+M ED++L  +  +SE D E+
Sbjct: 371 KKIETFTDMSDM-EDSSLYRSSSESESDSEE 398

The following BLAST results are available for this feature:

BLAST of MELO3C016928 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RPD1_ARATH	5.2e-38	30.77	Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1	[more]

BLAST of MELO3C016928 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L0X8_CUCSA	9.3e-244	92.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G649630 PE=4 SV=1	[more]
M5WBU2_PRUPE	1.8e-162	71.90	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa018971mg PE=4 SV=1	[more]
M4CDU9_BRARP	8.9e-162	70.56	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]
A0A078DSZ5_BRANA	1.2e-161	70.53	BnaA10g14300D protein OS=Brassica napus GN=BnaA10g14300D PE=4 SV=1	[more]
A0A078FUE6_BRANA	4.4e-161	70.71	BnaC09g36620D protein OS=Brassica napus GN=BnaC09g36620D PE=4 SV=1	[more]

BLAST of MELO3C016928 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G21970.1	8.8e-161	67.07	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G01037.1	1.0e-52	35.00	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT3G63090.1	1.7e-42	29.69	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G08940.1	6.3e-42	31.69	Ubiquitin carboxyl-terminal hydrolase family protein	[more]
AT4G33495.1	2.9e-39	30.77	Ubiquitin carboxyl-terminal hydrolase family protein	[more]

BLAST of MELO3C016928 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659104080\|ref\|XP_008452800.1\|	1.5e-263	100.00	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo]	[more]
gi\|449447369\|ref\|XP_004141441.1\|	1.3e-243	92.92	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus]	[more]
gi\|1009134419\|ref\|XP_015884436.1\|	2.1e-172	73.54	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Ziziphus jujuba]	[more]
gi\|645268413\|ref\|XP_008239517.1\|	8.6e-166	71.67	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Prunus mume]	[more]
gi\|764607298\|ref\|XP_011467180.1\|	1.1e-165	73.91	PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 isoform X1 [Fragaria vesca subsp....	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR021099	PORR_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C016928T1	MELO3C016928T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021099	Plant organelle RNA recognition domain	PFAM	PF11955	PORR	coord: 67..397 score: 2.5E
None	No IPR available	PANTHER	PTHR31476	FAMILY NOT NAMED	coord: 45..449 score: 9.2E
None	No IPR available	PANTHER	PTHR31476:SF8	EXPRESSED PROTEIN	coord: 45..449 score: 9.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C016928	Csa4G649630	Cucumber (Chinese Long) v2	cumeB313
MELO3C016928	Cla007468	Watermelon (97103) v1	mewmB528
MELO3C016928	ClCG05G015930	Watermelon (Charleston Gray)	mewcgB479
MELO3C016928	Cla97C05G096900	Watermelon (97103) v2	mewmbB484
MELO3C016928	Bhi09G002517	Wax gourd	mewgoB595
MELO3C016928	CSPI04G25880	Wild cucumber (PI 183967)	cpimeB311
MELO3C016928	Cucsa.271190	Cucumber (Gy14) v1	cgymeB454
MELO3C016928	CmaCh09G003790	Cucurbita maxima (Rimu)	cmameB040
MELO3C016928	CmoCh09G003810	Cucurbita moschata (Rifu)	cmomeB029
MELO3C016928	Lsi04G013710	Bottle gourd (USVL1VR-Ls)	lsimeB314
MELO3C016928	Cp4.1LG06g02640	Cucurbita pepo (Zucchini)	cpemeB734
MELO3C016928	CsGy4G024190	Cucumber (Gy14) v2	cgybmeB270
MELO3C016928	Carg02808	Silver-seed gourd	carmeB0633
MELO3C016928	CsaV3_4G036200	Cucumber (Chinese Long) v3	cucmeB316

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C016928	Cucurbita pepo (Zucchini)	cpemeB538
MELO3C016928	Silver-seed gourd	carmeB0767
MELO3C016928	Melon (DHL92) v3.5.1	memeB129
MELO3C016928	Cucurbita maxima (Rimu)	cmameB432
MELO3C016928	Cucurbita moschata (Rifu)	cmomeB424