CmoCh09G003810 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh09G003810
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUbiquitin carboxyl-terminal hydrolase family protein
LocationCmo_Chr09 : 1666143 .. 1667510 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTATGGCTGTTTGGATTGCCAATTCTTCGAAGGCCTTGGTCTCGAATGGGTACAATGTGAATTCTTCTCGTCATCTTCCATTTTTTTGCTTGAATGAGTTCGCAAATTATGTATGCAGAAATCGTTTTGTGGACTTGTGGTCGTGGTCACAAATCCGGTCGATGACAAGCAGTAAACGCGTTCAAGATAGAAGCCGCTTGAAGAGGGTGCAAGCTCTTGAAATCGCGACGGAAAAATGGAAGGTAGCTTACAAGGTACTCTTCTTGATCGAAACCCTCAAGCAAGAGCCTGAGATGATAATTCCAGTTAGGAATTTAGAGCAATATCGGAGACAAATCAATCTCCCGAAACCGCACAAGATCGCGGACTTCATTCGAAAATCCCCTAAACTGTTTGAACTGTACAAGGATCAGAGGGGCATATTGTGGTGTGGAATGACTAAACAAGCCGAAGATTTGATGGAAGAGGAGGAGACGCTAATTGAACAAAACGCTGATAAGGCTGCCGAGTATGTTACCAGGTTTTTGATGATGTCAGTGAATAAGCGGCTTCCGGTGGACAAGATTGCTCACTTCAGAAGAGATTTTGGGCTTCCAATTGATTTCCGAGCCAAATGGGTGAATGATTACCCTGAACTATTTAAGTTGGTGAAGTGTGAAGATGAACGTGAATACTTGGAGCTTGTTTCCTGGAATCCTGCCTGGGCTATAACAGAGCTGGAGAAGAAGTTGATGGGTGTGACTGAGAGCACTGCAACTCATACCCCAGGTTTGCTTTCACTTCCTTTTCCCTTGAAATTTCCTTCCAATTACAAGAAGATGTATAGATATGGAGGGAAAATTGATCATTTCCAGAAAAGGTCTTATTTATCTCCATATGCCGATGCAAGGGAGCTAAAAGCTGGCTCACTAGAATTTGATAAAAGGGCTGTTGCTGTTATGCACGAGTTGCTTAACTTCACCATGGAGAAGAGACTAGTTACTGATCACCTTACCCACTTTAGGCGGGAACTTGTGATGCCTCAGAAGCTAATGAGACTTCTTTTGAAGCATGTTGGGATATTCTATGTTTCAGAGAGGGGTAAAAGATTTAGTGTTTTCTTGACAGAAGCTTATGAAGGGCCGGAGTTGATTGATAAATGCCCTTTGGTTCTTTGGAAGGAGAAGGTTTTGAGCCTCGCTGGTTATAGAGGAAAGCGAAAAAGGATTAAAACTTTTGACGACACTTCTGAAATGGAGGACAACGGTTTGGCTTTGGCTGAGTATGACTCTGAGCAGGATATGGAGGATACTGATTGTTCAGAGGAGGCTGCATTAGATGCCAATACAACTGAAATAGAAACTAGGGATCTTGTCAGTGGGTAG

mRNA sequence

ATGTTTATGGCTGTTTGGATTGCCAATTCTTCGAAGGCCTTGGTCTCGAATGGGTACAATGTGAATTCTTCTCGTCATCTTCCATTTTTTTGCTTGAATGAGTTCGCAAATTATGTATGCAGAAATCGTTTTGTGGACTTGTGGTCGTGGTCACAAATCCGGTCGATGACAAGCAGTAAACGCGTTCAAGATAGAAGCCGCTTGAAGAGGGTGCAAGCTCTTGAAATCGCGACGGAAAAATGGAAGGTAGCTTACAAGGTACTCTTCTTGATCGAAACCCTCAAGCAAGAGCCTGAGATGATAATTCCAGTTAGGAATTTAGAGCAATATCGGAGACAAATCAATCTCCCGAAACCGCACAAGATCGCGGACTTCATTCGAAAATCCCCTAAACTGTTTGAACTGTACAAGGATCAGAGGGGCATATTGTGGTGTGGAATGACTAAACAAGCCGAAGATTTGATGGAAGAGGAGGAGACGCTAATTGAACAAAACGCTGATAAGGCTGCCGAGTATGTTACCAGGTTTTTGATGATGTCAGTGAATAAGCGGCTTCCGGTGGACAAGATTGCTCACTTCAGAAGAGATTTTGGGCTTCCAATTGATTTCCGAGCCAAATGGGTGAATGATTACCCTGAACTATTTAAGTTGGTGAAGTGTGAAGATGAACGTGAATACTTGGAGCTTGTTTCCTGGAATCCTGCCTGGGCTATAACAGAGCTGGAGAAGAAGTTGATGGGTGTGACTGAGAGCACTGCAACTCATACCCCAGGTTTGCTTTCACTTCCTTTTCCCTTGAAATTTCCTTCCAATTACAAGAAGATGTATAGATATGGAGGGAAAATTGATCATTTCCAGAAAAGGTCTTATTTATCTCCATATGCCGATGCAAGGGAGCTAAAAGCTGGCTCACTAGAATTTGATAAAAGGGCTGTTGCTGTTATGCACGAGTTGCTTAACTTCACCATGGAGAAGAGACTAGTTACTGATCACCTTACCCACTTTAGGCGGGAACTTGTGATGCCTCAGAAGCTAATGAGACTTCTTTTGAAGCATGTTGGGATATTCTATGTTTCAGAGAGGGGTAAAAGATTTAGTGTTTTCTTGACAGAAGCTTATGAAGGGCCGGAGTTGATTGATAAATGCCCTTTGGTTCTTTGGAAGGAGAAGGTTTTGAGCCTCGCTGGTTATAGAGGAAAGCGAAAAAGGATTAAAACTTTTGACGACACTTCTGAAATGGAGGACAACGGTTTGGCTTTGGCTGAGTATGACTCTGAGCAGGATATGGAGGATACTGATTGTTCAGAGGAGGCTGCATTAGATGCCAATACAACTGAAATAGAAACTAGGGATCTTGTCAGTGGGTAG

Coding sequence (CDS)

ATGTTTATGGCTGTTTGGATTGCCAATTCTTCGAAGGCCTTGGTCTCGAATGGGTACAATGTGAATTCTTCTCGTCATCTTCCATTTTTTTGCTTGAATGAGTTCGCAAATTATGTATGCAGAAATCGTTTTGTGGACTTGTGGTCGTGGTCACAAATCCGGTCGATGACAAGCAGTAAACGCGTTCAAGATAGAAGCCGCTTGAAGAGGGTGCAAGCTCTTGAAATCGCGACGGAAAAATGGAAGGTAGCTTACAAGGTACTCTTCTTGATCGAAACCCTCAAGCAAGAGCCTGAGATGATAATTCCAGTTAGGAATTTAGAGCAATATCGGAGACAAATCAATCTCCCGAAACCGCACAAGATCGCGGACTTCATTCGAAAATCCCCTAAACTGTTTGAACTGTACAAGGATCAGAGGGGCATATTGTGGTGTGGAATGACTAAACAAGCCGAAGATTTGATGGAAGAGGAGGAGACGCTAATTGAACAAAACGCTGATAAGGCTGCCGAGTATGTTACCAGGTTTTTGATGATGTCAGTGAATAAGCGGCTTCCGGTGGACAAGATTGCTCACTTCAGAAGAGATTTTGGGCTTCCAATTGATTTCCGAGCCAAATGGGTGAATGATTACCCTGAACTATTTAAGTTGGTGAAGTGTGAAGATGAACGTGAATACTTGGAGCTTGTTTCCTGGAATCCTGCCTGGGCTATAACAGAGCTGGAGAAGAAGTTGATGGGTGTGACTGAGAGCACTGCAACTCATACCCCAGGTTTGCTTTCACTTCCTTTTCCCTTGAAATTTCCTTCCAATTACAAGAAGATGTATAGATATGGAGGGAAAATTGATCATTTCCAGAAAAGGTCTTATTTATCTCCATATGCCGATGCAAGGGAGCTAAAAGCTGGCTCACTAGAATTTGATAAAAGGGCTGTTGCTGTTATGCACGAGTTGCTTAACTTCACCATGGAGAAGAGACTAGTTACTGATCACCTTACCCACTTTAGGCGGGAACTTGTGATGCCTCAGAAGCTAATGAGACTTCTTTTGAAGCATGTTGGGATATTCTATGTTTCAGAGAGGGGTAAAAGATTTAGTGTTTTCTTGACAGAAGCTTATGAAGGGCCGGAGTTGATTGATAAATGCCCTTTGGTTCTTTGGAAGGAGAAGGTTTTGAGCCTCGCTGGTTATAGAGGAAAGCGAAAAAGGATTAAAACTTTTGACGACACTTCTGAAATGGAGGACAACGGTTTGGCTTTGGCTGAGTATGACTCTGAGCAGGATATGGAGGATACTGATTGTTCAGAGGAGGCTGCATTAGATGCCAATACAACTGAAATAGAAACTAGGGATCTTGTCAGTGGGTAG
Homology
[Close]
BLAST of CmoCh09G003810 vs. Swiss-Prot
Match: RPD1_ARATH (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.9e-33
Identity = 100/356 (28.09%), Postives = 177/356 (49.72%), Query Frame = 1 

Query: 53  IRSMTSSKRVQDRSRLKRVQALEIATEKWKVAYKVLFLIETLKQEPEMIIPVRNLEQYRR 112
           ++  + S  +  +    R    +   E  K   KV+     +  +P   I +  L+   R
Sbjct: 31  VKPFSQSTTIPKKQDRVRDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLAR 90

Query: 113 QINLP-KPHKIADFIRKSPKLFELYKDQ-RGILWCGMTKQAEDLMEEEETLIEQNADKAA 172
           ++ L  K H+   F+ K P +FE+Y+   + IL+C +T++A D +  E   +      A 
Sbjct: 91  RLGLGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAV 150

Query: 173 EYVTRFLMMSVNKRLPVDKIAHFRRDFGLPIDFRAKWVNDYPELFKLVKCEDERE-YLEL 232
             + + +MMS   R+ ++ +   R +FGLP DF    +  +P+ F+L+  E+ R+ Y+E+
Sbjct: 151 TRLRKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEI 210

Query: 233 VSWNPAWAITELEKKLMGVTESTATHTPGL----LSLPFPLKFPSNYKKMYRYGGKIDHF 292
           V  +P  +I  +E+            T G+    +   F + FP  +K    +   +  +
Sbjct: 211 VEKDPNLSICAIER-----VREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKW 270

Query: 293 QKRSYLSPYADARELKAGSLE----FDKRAVAVMHELLNFTMEKRLVTDHLTHFRRELVM 352
           Q+  Y SPY D       S+E     +KR+VA +HELL+ T+EK++  + + HFR  + +
Sbjct: 271 QRLPYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNL 330

Query: 353 PQKLMRLLLKHVGIFYVSER---GKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSL 395
           P+KL   LL+H GIFY+S R   GK  +VFL E Y+  EL++   + L + ++  L
Sbjct: 331 PKKLKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAEL 381

[Close]
BLAST of CmoCh09G003810 vs. TrEMBL
Match: A0A0A0L0X8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G649630 PE=4 SV=1)

HSP 1 Score: 765.4 bits (1975), Expect = 4.0e-218
Identity = 379/452 (83.85%), Postives = 415/452 (91.81%), Query Frame = 1 

Query: 1   MFMAVWIANSSKALVSNGYNVNSSRHLPFFCLNEFANYVCRNRFVDLWSWSQIRSMTSSK 60
           MF AV IANS K L+SN YNVN SR L FF LNE  NY+CRNRFV+LWSWSQIR MT+SK
Sbjct: 1   MFTAVRIANSVKVLISNEYNVNYSRLLQFFNLNELPNYLCRNRFVELWSWSQIRLMTTSK 60

Query: 61  RVQDRSRLKRVQALEIATEKWKVAYKVLFLIETLKQEPEMIIPVRNLEQYRRQINLPKPH 120
           RVQDRS+ KRVQ LE+ATEKWKVA+KVLFLIETLK+EPEMIIPVRNLE+YRR+INLPKPH
Sbjct: 61  RVQDRSQFKRVQDLELATEKWKVAHKVLFLIETLKEEPEMIIPVRNLERYRRKINLPKPH 120

Query: 121 KIADFIRKSPKLFELYKDQRGILWCGMTKQAEDLMEEEETLIEQNADKAAEYVTRFLMMS 180
           +I+DFIRKSP++FELYKDQRG+LWCG+TKQA+DL+EEE  ++EQ+ADK AEYVTRFLMMS
Sbjct: 121 RISDFIRKSPEMFELYKDQRGVLWCGLTKQADDLVEEENKIVEQHADKVAEYVTRFLMMS 180

Query: 181 VNKRLPVDKIAHFRRDFGLPIDFRAKWVNDYPELFKLVKCEDEREYLELVSWNPAWAITE 240
           VNKRLPVDKIAHFRRDFGLP+DFRAKWV +YPELF++VK EDE EYLELVSWNPAWA+TE
Sbjct: 181 VNKRLPVDKIAHFRRDFGLPLDFRAKWVKNYPELFRVVKSEDECEYLELVSWNPAWAVTE 240

Query: 241 LEKKLMGVTESTATHTPGLLSLPFPLKFPSNYKKMYRYGGKIDHFQKRSYLSPYADAREL 300
           LEKK MG TESTATHTPGLLSLPFPLKFPSNYKKMYRY GKID FQKRSYLSPYADA  L
Sbjct: 241 LEKKFMGATESTATHTPGLLSLPFPLKFPSNYKKMYRYRGKIDQFQKRSYLSPYADASGL 300

Query: 301 KAGSLEFDKRAVAVMHELLNFTMEKRLVTDHLTHFRRELVMPQKLMRLLLKHVGIFYVSE 360
           KAGSLEFDKRA+AVMHELL+FTMEKRLVTDHLTHFR+ELVMPQKLMRLLLKHVGIFYVSE
Sbjct: 301 KAGSLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLMRLLLKHVGIFYVSE 360

Query: 361 RGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSLAGYRGKRKRIKTFDDTSEM-EDNGLA 420
           RGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLS  GYR K+K+IKTF+D SEM EDN L 
Sbjct: 361 RGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRAKKKKIKTFNDMSEMEEDNNLL 420

Query: 421 LAEYDSEQDMEDTDCSEEAALDANTTEIETRD 452
           LA+ DSEQDMEDT CSEE +LDANT ++ETRD
Sbjct: 421 LADDDSEQDMEDTGCSEETSLDANTVDMETRD 452

[Close]
BLAST of CmoCh09G003810 vs. TrEMBL
Match: A0A061GSJ4_THECC (Ubiquitin carboxyl-terminal hydrolase family protein OS=Theobroma cacao GN=TCM_037418 PE=4 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 6.0e-166
Identity = 304/437 (69.57%), Postives = 353/437 (80.78%), Query Frame = 1 

Query: 5   VWIANSSKALVSNGYNVNSSRHLPFFCLNEFANYVCRNRFVD-LWSWSQIRSMTSSKRVQ 64
           +W+  S K        + S+ H  F  L      V RN + + L+ W Q R+MTSS+RVQ
Sbjct: 10  LWLNKSGKT-----QRLRSNHHQMFGLLP-----VRRNLYQEPLFGWFQNRTMTSSRRVQ 69

Query: 65  DRSRLKRVQALEIATEKWKVAYKVLFLIETLKQEPEMIIPVRNLEQYRRQINLPKPHKIA 124
           DRS+ KR+  LEI  EKWK++ KVLFL+E LK+E EMIIPVR+L+QYR+QINLPKPHKI 
Sbjct: 70  DRSKNKRIHHLEIVKEKWKISSKVLFLMEVLKKEHEMIIPVRSLDQYRKQINLPKPHKIT 129

Query: 125 DFIRKSPKLFELYKDQRGILWCGMTKQAEDLMEEEETLIEQNADKAAEYVTRFLMMSVNK 184
           DFIRK PKLFELYKDQRG LWCGMTK+AEDL+EEEE LIE+ + KA E+VT+ LMMSV+K
Sbjct: 130 DFIRKCPKLFELYKDQRGTLWCGMTKEAEDLLEEEERLIEEQSTKAVEFVTKILMMSVDK 189

Query: 185 RLPVDKIAHFRRDFGLPIDFRAKWVNDYPELFKLVKCEDEREYLELVSWNPAWAITELEK 244
           R+ +DKIAHFRRDFGLPI+FRAKWVN YP+ F++VK +D  E+LELV+WNPAWAITELEK
Sbjct: 190 RIQLDKIAHFRRDFGLPIEFRAKWVNQYPQHFRVVKSKDGVEFLELVNWNPAWAITELEK 249

Query: 245 KLMGVTESTATHTPGLLSLPFPLKFPSNYKKMYRYGGKIDHFQKRSYLSPYADARELKAG 304
           K +G+ E      PGLLSLPFPLKFP NYKK+YR+GGKI HFQKRSYLSPYADARELKAG
Sbjct: 250 KALGLNEGIG-REPGLLSLPFPLKFPPNYKKLYRHGGKIAHFQKRSYLSPYADARELKAG 309

Query: 305 SLEFDKRAVAVMHELLNFTMEKRLVTDHLTHFRRELVMPQKLMRLLLKHVGIFYVSERGK 364
           SLEFDKRA+AVMHELL+FT+EKRLVTDHLTHFRRELVMPQKLMRLLLKH GIFYVSERGK
Sbjct: 310 SLEFDKRAIAVMHELLSFTIEKRLVTDHLTHFRRELVMPQKLMRLLLKHFGIFYVSERGK 369

Query: 365 RFSVFLTEAYEGPELIDKCPLVLWKEKVLSLAGYRGKRKRIKTFDDTSEMEDNGLALAEY 424
           RFSVFLTEAYEG ELI+KCPLVLWKEKVLSL GYRGK+K I TF D S+M++    L E 
Sbjct: 370 RFSVFLTEAYEGSELIEKCPLVLWKEKVLSLVGYRGKKKEIPTFSDLSDMDEKD--LIEV 429

Query: 425 DSEQDMEDTDCSEEAAL 441
           D+E D    +  EE  +
Sbjct: 430 DTENDSICAEFEEEETM 433

[Close]
BLAST of CmoCh09G003810 vs. TrEMBL
Match: M4CDU9_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 588.6 bits (1516), Expect = 6.6e-165
Identity = 285/389 (73.26%), Postives = 335/389 (86.12%), Query Frame = 1 

Query: 53  IRSMTSSKRVQDRSRLKRVQALEIATEKWKVAYKVLFLIETLKQEPEMIIPVRNLEQYRR 112
           +R MTSSKRVQDRSR KRV+ LE+ATEKWK+A KV+FL+E LK EPEMI+ VR LEQYRR
Sbjct: 39  VRLMTSSKRVQDRSREKRVRELEVATEKWKIANKVMFLMELLKSEPEMIMKVRLLEQYRR 98

Query: 113 QINLPKPHKIADFIRKSPKLFELYKDQRGILWCGMTKQAEDLMEEEETLIEQNADKAAEY 172
           QINLPKPHKI+DFIRKSPKLFELYKD+RG+LWCGMTK+ E+L+EE + L+E+N DKAAE+
Sbjct: 99  QINLPKPHKISDFIRKSPKLFELYKDERGVLWCGMTKEGEELLEEHDGLVEENGDKAAEH 158

Query: 173 VTRFLMMSVNKRLPVDKIAHFRRDFGLPIDFRAKWVNDYPELFKLVKCEDEREYLELVSW 232
           VTR LMMSV+K+L +DKIAHFRRDFGLP+DFR  WVN +PELFK+VK ED  EYLELVSW
Sbjct: 159 VTRCLMMSVDKKLRLDKIAHFRRDFGLPLDFRVNWVNKFPELFKVVKVEDGEEYLELVSW 218

Query: 233 NPAWAITELEKKLMGVTESTATHTPGLLSLPFPLKFPSNYKKMYRYGGKIDHFQKRSYLS 292
           NPAWAITELEKK +G+TE  + H PGLLSLPFP+KFP +YKKMYRY GKI+HFQKR+YLS
Sbjct: 219 NPAWAITELEKKTLGLTEE-SDHKPGLLSLPFPMKFPPSYKKMYRYRGKIEHFQKRTYLS 278

Query: 293 PYADARELKAGSLEFDKRAVAVMHELLNFTMEKRLVTDHLTHFRRELVMPQKLMRLLLKH 352
           PYADAR L+AGS EFDKRA+AVMHELL+FT+EKRLVTDHLTHFRRE VMPQKLMR+ LKH
Sbjct: 279 PYADARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLKH 338

Query: 353 VGIFYVSERGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSLAGYRGKRKRIKTFDDTSE 412
            GIFYVSERGKRFSVFLTEAYEGPELI+KCPL+LWKEK+L   GYRG+++ I+T+ DT E
Sbjct: 339 CGIFYVSERGKRFSVFLTEAYEGPELIEKCPLILWKEKLLRFTGYRGRKRDIQTYSDTLE 398

Query: 413 MEDNGLALAEYDSEQDMEDTDCSEEAALD 442
           ME+  L  +    + D +D    ++  +D
Sbjct: 399 MEEKELLYSSSSGDDDDDDMMSDDDDEMD 426

[Close]
BLAST of CmoCh09G003810 vs. TrEMBL
Match: A0A078DSZ5_BRANA (BnaA10g14300D protein OS=Brassica napus GN=BnaA10g14300D PE=4 SV=1)

HSP 1 Score: 586.3 bits (1510), Expect = 3.3e-164
Identity = 286/381 (75.07%), Postives = 331/381 (86.88%), Query Frame = 1 

Query: 53  IRSMTSSKRVQDRSRLKRVQALEIATEKWKVAYKVLFLIETLKQEPEMIIPVRNLEQYRR 112
           +R MTSSKRVQDRSR KRV+ LE+ATEKWK+A KV+FL+E LK EPEMI+ VR LEQYRR
Sbjct: 39  VRLMTSSKRVQDRSREKRVRELEVATEKWKIANKVMFLMELLKSEPEMIMKVRLLEQYRR 98

Query: 113 QINLPKPHKIADFIRKSPKLFELYKDQRGILWCGMTKQAEDLMEEEETLIEQNADKAAEY 172
           QINLPKPHKI+DFIRKSPKLFELYKD+RG+LWCGMTK+ E+L+EE + L+E+N DKAAE+
Sbjct: 99  QINLPKPHKISDFIRKSPKLFELYKDERGVLWCGMTKEGEELLEEHDGLVEENGDKAAEH 158

Query: 173 VTRFLMMSVNKRLPVDKIAHFRRDFGLPIDFRAKWVNDYPELFKLVKCEDEREYLELVSW 232
           VTR LMMSV+K+L +DKIAHFRRDFGLP+DFR  WVN +PELFK+VK ED  EYLELVSW
Sbjct: 159 VTRCLMMSVDKKLRLDKIAHFRRDFGLPLDFRVNWVNKFPELFKVVKVEDGEEYLELVSW 218

Query: 233 NPAWAITELEKKLMGVTESTATHTPGLLSLPFPLKFPSNYKKMYRYGGKIDHFQKRSYLS 292
           NPAWAITELEKK +G+TE  + H PGLLSLPFP+KFP +YKKMYRY GKI+HFQKR+YLS
Sbjct: 219 NPAWAITELEKKTLGLTEE-SDHKPGLLSLPFPMKFPPSYKKMYRYRGKIEHFQKRTYLS 278

Query: 293 PYADARELKAGSLEFDKRAVAVMHELLNFTMEKRLVTDHLTHFRRELVMPQKLMRLLLKH 352
           PYADAR L+AGS EFDKRA+AVMHELL+FT+EKRLVTDHLTHFRRE VMPQKLMR+ LKH
Sbjct: 279 PYADARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLKH 338

Query: 353 VGIFYVSERGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSLAGYRGKRKRIKTFDDTSE 412
            GIFYVSERGKRFSVFLTEAYEGPELI+KCPL+LWKEK+L   GYRG+++ I+T+ DT E
Sbjct: 339 CGIFYVSERGKRFSVFLTEAYEGPELIEKCPLILWKEKLLRFTGYRGRKRDIQTYSDTLE 398

Query: 413 MEDNGLALAEYDSEQDMEDTD 434
           ME+  L    Y S    +D D
Sbjct: 399 MEEKELL---YSSSSGGDDDD 415

[Close]
BLAST of CmoCh09G003810 vs. TrEMBL
Match: A0A078FUE6_BRANA (BnaC09g36620D protein OS=Brassica napus GN=BnaC09g36620D PE=4 SV=1)

HSP 1 Score: 583.6 bits (1503), Expect = 2.1e-163
Identity = 288/395 (72.91%), Postives = 337/395 (85.32%), Query Frame = 1 

Query: 53  IRSMTSSKRVQDRSRLKRVQALEIATEKWKVAYKVLFLIETLKQEPEMIIPVRNLEQYRR 112
           +R MTSSKRVQDRSR KRV+ LE+ATEKWK+A KV+FL+E LK EPEMI+ VR LEQYRR
Sbjct: 39  VRLMTSSKRVQDRSREKRVRELEVATEKWKIANKVMFLMELLKSEPEMIMKVRLLEQYRR 98

Query: 113 QINLPKPHKIADFIRKSPKLFELYKDQRGILWCGMTKQAEDLMEEEETLIEQNADKAAEY 172
           QINLPKPHKI+DFIRKSPKLFELYKD+RG+LWCGMTK+ EDL++E + L+E+N DKAAE+
Sbjct: 99  QINLPKPHKISDFIRKSPKLFELYKDERGVLWCGMTKEGEDLLDEHDGLVEENGDKAAEH 158

Query: 173 VTRFLMMSVNKRLPVDKIAHFRRDFGLPIDFRAKWVNDYPELFKLVKCEDEREYLELVSW 232
           VTR LMMSV+K+L +DKIAHFRRDFGLP+DFR  WVN +PELFK+VK ED  EYLELVSW
Sbjct: 159 VTRCLMMSVDKKLRLDKIAHFRRDFGLPLDFRVNWVNKFPELFKVVKVEDGEEYLELVSW 218

Query: 233 NPAWAITELEKKLMGVTESTATHTPGLLSLPFPLKFPSNYKKMYRYGGKIDHFQKRSYLS 292
           NPAWAITELEKK +G+TE  + H PGLLSLPFP+ FP +YKKMYRY GKI+HFQKR+YLS
Sbjct: 219 NPAWAITELEKKTLGLTEE-SDHKPGLLSLPFPMNFPPSYKKMYRYRGKIEHFQKRAYLS 278

Query: 293 PYADARELKAGSLEFDKRAVAVMHELLNFTMEKRLVTDHLTHFRRELVMPQKLMRLLLKH 352
           PYADAR L+AGS EFDKRA+AVMHELL+FT+EKRLVTDHLTHFRRE VMPQKLMR+ LKH
Sbjct: 279 PYADARGLEAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRREFVMPQKLMRIFLKH 338

Query: 353 VGIFYVSERGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSLAGYRGKRKRIKTFDDTSE 412
            GIFYVSERGKRFSVFLTEAYEG ELI+KCPL+LWKEK+L   GYRG+++ I+TF DT E
Sbjct: 339 CGIFYVSERGKRFSVFLTEAYEGTELIEKCPLILWKEKLLRFTGYRGRKRDIQTFSDTLE 398

Query: 413 MEDNGL---ALAEYDSEQDM---EDTDCSEEAALD 442
           ME+  L   + +  D + DM   +D D  +E  +D
Sbjct: 399 MEERELLYRSSSSGDDDDDMISDDDDDDDDEMDID 432

[Close]
BLAST of CmoCh09G003810 vs. TAIR10
Match: AT5G21970.1 (AT5G21970.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 567.0 bits (1460), Expect = 1.0e-161
Identity = 286/430 (66.51%), Postives = 339/430 (78.84%), Query Frame = 1 

Query: 22  NSSRHLPFFCLNEFANYVCRNRFVDLWSWSQIRSMTSSKRVQDRSRLKRVQALEIATEKW 81
           N + H  F  + E       + F  +W    +R MTSSKRVQDRSR KRVQ LEIATEKW
Sbjct: 13  NGNAHNVFAIMPERNVLYGESSFRRVW----VRFMTSSKRVQDRSREKRVQELEIATEKW 72

Query: 82  KVAYKVLFLIETLKQEPEMIIPVRNLEQYRRQINLPKPHKIADFIRKSPKLFELYKDQRG 141
           K+A KV+FL+E LK E +MI+ VR+ EQYRRQINLPKPHKI+DFIRKSPKLFELYKDQRG
Sbjct: 73  KIASKVIFLMEVLKGERDMIMTVRSFEQYRRQINLPKPHKISDFIRKSPKLFELYKDQRG 132

Query: 142 ILWCGMTKQAEDLMEEEETLIEQNADKAAEYVTRFLMMSVNKRLPVDKIAHFRRDFGLPI 201
           +LWCG+T+  EDL++E + L+E+N DKAAE+VTR LMMSV+K+LP+DKI HFRRDFGLP+
Sbjct: 133 VLWCGLTEGGEDLLDEHDKLLEENGDKAAEHVTRCLMMSVDKKLPLDKIVHFRRDFGLPL 192

Query: 202 DFRAKWVNDYPELFKLVKCEDEREYLELVSWNPAWAITELEKKLMGVTESTATHTPGLLS 261
           DFR  WV ++P+ FK+VK  D  EYLELVSWNPAWAITELEKK +G+TE    H PG+LS
Sbjct: 193 DFRINWVYNFPQHFKVVKLGDGEEYLELVSWNPAWAITELEKKTLGITED-CEHKPGMLS 252

Query: 262 LPFPLKFPSNYKKMYRYGGKIDHFQKRSYLSPYADARELKAGSLEFDKRAVAVMHELLNF 321
           L FP+KFP +YKKMYRY GKI+HFQKRSYLSPYADAR L+AGS EFDKRA+AVMHELL+F
Sbjct: 253 LAFPMKFPPSYKKMYRYRGKIEHFQKRSYLSPYADARGLEAGSKEFDKRAIAVMHELLSF 312

Query: 322 TMEKRLVTDHLTHFRRELVMPQKLMRLLLKHVGIFYVSERGKRFSVFLTEAYEGPELIDK 381
           T+EKRLVTDHLTHFRRE VMPQKLMR+ LKH GIFYVSERGKRFSVFLTE YEGPELI+K
Sbjct: 313 TLEKRLVTDHLTHFRREFVMPQKLMRIFLKHCGIFYVSERGKRFSVFLTEGYEGPELIEK 372

Query: 382 CPLVLWKEKVLSLAGYRGKRKRIKTFDDTSEMEDNGLALAEYDSEQDMEDTDCSEEAALD 441
           CPL+LWKEK+L   GYRG+++ I+T+ DT +ME+  L       E    D D S     D
Sbjct: 373 CPLILWKEKLLKFTGYRGRKRDIQTYSDTLDMEERELL------ESGSGDEDLSVGFEKD 431

Query: 442 ANTTEIETRD 452
            +  ++ T D
Sbjct: 433 GDYDDVVTDD 431

[Close]
BLAST of CmoCh09G003810 vs. TAIR10
Match: AT4G01037.1 (AT4G01037.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 191.8 bits (486), Expect = 9.2e-49
Identity = 131/386 (33.94%), Postives = 207/386 (53.63%), Query Frame = 1 

Query: 65  RSRLKRVQAL--EIATEKWKVAYKVLFLIETLKQEPEMIIPVRNLEQYRRQINLPKPHKI 124
           R+ +KR + L  +   ++ K    VL + + L  +P+ ++ +R L +YRR + L K  + 
Sbjct: 73  RAAVKRRKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRF 132

Query: 125 ADFIRKSPKLFELYKDQRGILWCGMTKQAEDLMEEEETLIEQNADKAAEYVTRFLMMSVN 184
              +RK P +FE+ ++    L   MT +AE L  +E  +  +  D     + + +MMS++
Sbjct: 133 IALLRKYPGVFEIVEEGAYSLRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSID 192

Query: 185 KRLPVDKIAHFRRDFGLPIDFRAKWVNDYPELFKLVKCEDEREYLELVSWNPAWAITELE 244
           KR+ ++KI+H + D GLP++FR      YP+ F++V        LEL  W+P  A++  E
Sbjct: 193 KRILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTP-RGPALELTHWDPELAVSAAE 252

Query: 245 KKLMGVTESTATHTPGLLSLPFPLKF-----PSNYKKMYRYGGKIDHFQKRSYLSPYADA 304
             L      T       L +  P KF     P           KI  F+   Y+SPY D 
Sbjct: 253 --LSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDF 312

Query: 305 RELKAGSLEFDKRAVAVMHELLNFTMEKRLVTDHLTHFRRELVMPQKLMRLLLKHVGIFY 364
             L++G+LE +K A  V+HELL+ T EKR + DHLTHFR E    Q+L  +L++H  +FY
Sbjct: 313 SHLRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFY 372

Query: 365 VSERGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSLAGYR--GKRKRIKTFDDTSEMED 424
           VS +G+R SVFL EAY   ELIDK PL L KEK+ +L       +R   +  ++  E+E 
Sbjct: 373 VSLKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKDEEGREVEI 432

Query: 425 NGLALAEYDSEQDMEDTDCSEEAALD 442
           +G   ++ D E++ E++D  E + +D
Sbjct: 433 DG---SDADGEEEEEESDAEEWSDVD 452

[Close]
BLAST of CmoCh09G003810 vs. TAIR10
Match: AT4G08940.1 (AT4G08940.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 166.0 bits (419), Expect = 5.4e-41
Identity = 100/305 (32.79%), Postives = 164/305 (53.77%), Query Frame = 1 

Query: 92  ETLKQEPEMIIPVRNLEQYRRQINLPKPHKIADFIRKSPKLFELYKDQRGILWCGMTKQA 151
           E + ++PE I+ + +  +  R++  P+  K+  FI K P +F+ Y+   G +W G T+  
Sbjct: 89  EFISKQPERILRLDDAGKLYRELGFPRGRKVTKFIPKHPLIFQTYRHSDGKIWLGFTEFM 148

Query: 152 EDLMEEEETLIEQNADKAAEYVTRFLMMSVNKRLPVDKIAHFRRDFGLPIDFRAKWVNDY 211
           EDL++EE+ L+E         V + LMM+ +KR+ + KI H R  FG+P DFR + V  Y
Sbjct: 149 EDLLDEEKGLMESMELDRVNCVRKLLMMTKDKRILLSKIHHTRLLFGIPEDFRDR-VAKY 208

Query: 212 PELFKLVKCEDEREYLELVSWNPAWAITELEKKLMGVTESTATHTPGLLSLPFPLKFPSN 271
           P+ F++V   D    LELV+W+   A++ELE+  M + E  A          FP+K    
Sbjct: 209 PDYFRVVTGGDGNRVLELVNWDTNLAVSELERLFM-IDEDKAKRV-----FKFPVKHGKE 268

Query: 272 YKKMYRYGGKIDHFQKRSYLSPYADARELKAGSLEFDKRAVAVMHELLNFTMEKRLVTDH 331
            +   +   K++       +SPY+D  +L   SLE +K  V ++HE LN T+EKR    H
Sbjct: 269 LELEEKDTRKLNLLNTFPLVSPYSDGWKLDVWSLEAEKYRVGIVHEFLNLTLEKRASIHH 328

Query: 332 LTHFRRELVMPQKLMRLLLKHVGIFYVSERGKRFSVFLTEAY-EGPELIDKCPLVLWKEK 391
           +  F+ E  + ++  ++L K    FY++     ++VFL +AY E   L+ K P V++ EK
Sbjct: 329 IVEFKDEFSLTRQTYQMLKKQSMSFYLAGTEMNWTVFLKDAYDENGVLVSKDPQVVFNEK 386

Query: 392 VLSLA 396
           +   A
Sbjct: 389 LYKYA 386

[Close]
BLAST of CmoCh09G003810 vs. TAIR10
Match: AT3G63090.1 (AT3G63090.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 162.5 bits (410), Expect = 5.9e-40
Identity = 112/362 (30.94%), Postives = 183/362 (50.55%), Query Frame = 1 

Query: 52  QIRSMTSSKRVQDRSRLKRVQALEIATEKWKVAYKVLFLIETLKQEPEMIIPVRNLEQYR 111
           QIR ++S K V      K+   L+ A E+ K       +++ +  EP  +IP+R LE+ R
Sbjct: 27  QIRWISSLKVVW-----KKDTRLDEAIEQDKRYKLCARVVKEVLNEPGQVIPLRYLEKRR 86

Query: 112 RQINLPKPHKIADFIRKSPKLFELYKDQ-----RGILWCGMTKQAEDLMEEEETLIEQNA 171
            ++ L    K   F+  +P LFE+Y D+       + +   T +    ++EE+ +  +N 
Sbjct: 87  ERLRLT--FKAKSFVEMNPSLFEIYYDRIKPKSDPVQFLRPTPRLRAFLDEEQRIYSENE 146

Query: 172 DKAAEYVTRFLMMSVNKRLPVDKIAHFRRDFGLPIDFRAKWVNDYPELFKLVKCEDE-RE 231
                 + + LMM+ +K +  DK+ H +RDFG P DF  K V  YP  F+L    +E + 
Sbjct: 147 PLLVSKLCQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQKYPNYFRLTGLPEEGKS 206

Query: 232 YLELVSWNPAWAITELEKKLMGVTESTATHTPGLLSLPFPLKFPSNYKKMYRYGGKIDHF 291
           +LELVSWNP +A +++E +    T  T       +   + +K PS +            +
Sbjct: 207 FLELVSWNPDFAKSKIELRAEDETLKTGVR----IRPNYNVKLPSGFFLRKEMREWTRDW 266

Query: 292 QKRSYLSPYADARELKAGSLEFDKRAVAVMHELLNFTMEKRLVTDHLTHFRRELVMPQKL 351
            ++ Y+SPY D   L   S E +KR V V+HELL+ ++ KR+    L  F  E       
Sbjct: 267 LEQDYISPYEDVSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKFCDEFRFSNAF 326

Query: 352 MRLLLKHVGIFYVSERGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSL--AGYRGKRKR 406
             +  +H GIFY+S +G   +  L EAY+  EL+D+ PL+  K+K L L   G++ ++ R
Sbjct: 327 SSVFTRHSGIFYLSLKGGIKTAVLREAYKDDELVDRDPLLAIKDKFLRLLEEGWQERKDR 377

[Close]
BLAST of CmoCh09G003810 vs. TAIR10
Match: AT1G79120.1 (AT1G79120.1 Ubiquitin carboxyl-terminal hydrolase family protein)

HSP 1 Score: 158.3 bits (399), Expect = 1.1e-38
Identity = 106/360 (29.44%), Postives = 185/360 (51.39%), Query Frame = 1 

Query: 48  WSWSQIRSMTSSKRVQDRSRL-KRVQALEIATEKWKVAYKVLFLIETLKQEPEMIIPVRN 107
           W++ Q+R  +     + + ++  RV  L+ A +  K    +L L   ++ +    + +R+
Sbjct: 41  WTFVQVRHKSGGGGWRPKQKVYHRVHDLDKAIDLNKKPSLILQLKSIIQAQKHGSLLLRD 100

Query: 108 LEQYRRQINLPKPHKIADFIRKSPKLFELYKDQRGILWCGMTKQAEDLMEEEETLIEQNA 167
           LE++   +       +   I K P +F +    +   +  +T++A+ +  EE    E   
Sbjct: 101 LEKH---VGFVHKWNLMAAIEKYPTIFYVGGGHKEPPFVMLTEKAKKIAAEESEATESME 160

Query: 168 DKAAEYVTRFLMMSVNKRLPVDKIAHFRRDFGLPIDFRAKWVNDYPELFKLVKCEDEREY 227
                 + + LMMSV+ R+P++K+   +   GLP DF++  +  Y E F L K  + +  
Sbjct: 161 PILVNNLRKLLMMSVDCRVPLEKVEFIQSAMGLPQDFKSTLIPKYTEFFSL-KVINGKVN 220

Query: 228 LELVSWNPAWAITELEKKLM--GVTESTATHTPGLLSLP--------FPLKFPSNYKKMY 287
           L L +W+ + AIT  E +L   G +ES        ++          F + FP  ++   
Sbjct: 221 LVLENWDSSLAITAREDRLSREGFSESVGDRKRVRITKDGNFLGRNAFKISFPPGFRPNA 280

Query: 288 RYGGKIDHFQKRSYLSPYADARELKAGSLEFDKRAVAVMHELLNFTMEKRLVTDHLTHFR 347
            Y  + + +QK  + SPY +AR   A   +  KR VAV+HELL+ TMEKR+    L  F 
Sbjct: 281 SYLEEFEKWQKMEFPSPYLNARRFDAADPKARKRVVAVLHELLSLTMEKRVTCAQLDAFH 340

Query: 348 RELVMPQKLMRLLLKHVGIFYVSERGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSLAG 397
            E ++P +L+  L+KH GIFY++ +G R +VFL +AY G  LI+KCPL+L+ ++ ++L G
Sbjct: 341 SEYLLPSRLILCLIKHQGIFYITNKGARGTVFLKDAYAGSNLIEKCPLLLFHDRFVALCG 396

[Close]
BLAST of CmoCh09G003810 vs. NCBI nr
Match: gi|449447369|ref|XP_004141441.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus])

HSP 1 Score: 765.4 bits (1975), Expect = 5.7e-218
Identity = 379/452 (83.85%), Postives = 415/452 (91.81%), Query Frame = 1 

Query: 1   MFMAVWIANSSKALVSNGYNVNSSRHLPFFCLNEFANYVCRNRFVDLWSWSQIRSMTSSK 60
           MF AV IANS K L+SN YNVN SR L FF LNE  NY+CRNRFV+LWSWSQIR MT+SK
Sbjct: 1   MFTAVRIANSVKVLISNEYNVNYSRLLQFFNLNELPNYLCRNRFVELWSWSQIRLMTTSK 60

Query: 61  RVQDRSRLKRVQALEIATEKWKVAYKVLFLIETLKQEPEMIIPVRNLEQYRRQINLPKPH 120
           RVQDRS+ KRVQ LE+ATEKWKVA+KVLFLIETLK+EPEMIIPVRNLE+YRR+INLPKPH
Sbjct: 61  RVQDRSQFKRVQDLELATEKWKVAHKVLFLIETLKEEPEMIIPVRNLERYRRKINLPKPH 120

Query: 121 KIADFIRKSPKLFELYKDQRGILWCGMTKQAEDLMEEEETLIEQNADKAAEYVTRFLMMS 180
           +I+DFIRKSP++FELYKDQRG+LWCG+TKQA+DL+EEE  ++EQ+ADK AEYVTRFLMMS
Sbjct: 121 RISDFIRKSPEMFELYKDQRGVLWCGLTKQADDLVEEENKIVEQHADKVAEYVTRFLMMS 180

Query: 181 VNKRLPVDKIAHFRRDFGLPIDFRAKWVNDYPELFKLVKCEDEREYLELVSWNPAWAITE 240
           VNKRLPVDKIAHFRRDFGLP+DFRAKWV +YPELF++VK EDE EYLELVSWNPAWA+TE
Sbjct: 181 VNKRLPVDKIAHFRRDFGLPLDFRAKWVKNYPELFRVVKSEDECEYLELVSWNPAWAVTE 240

Query: 241 LEKKLMGVTESTATHTPGLLSLPFPLKFPSNYKKMYRYGGKIDHFQKRSYLSPYADAREL 300
           LEKK MG TESTATHTPGLLSLPFPLKFPSNYKKMYRY GKID FQKRSYLSPYADA  L
Sbjct: 241 LEKKFMGATESTATHTPGLLSLPFPLKFPSNYKKMYRYRGKIDQFQKRSYLSPYADASGL 300

Query: 301 KAGSLEFDKRAVAVMHELLNFTMEKRLVTDHLTHFRRELVMPQKLMRLLLKHVGIFYVSE 360
           KAGSLEFDKRA+AVMHELL+FTMEKRLVTDHLTHFR+ELVMPQKLMRLLLKHVGIFYVSE
Sbjct: 301 KAGSLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLMRLLLKHVGIFYVSE 360

Query: 361 RGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSLAGYRGKRKRIKTFDDTSEM-EDNGLA 420
           RGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLS  GYR K+K+IKTF+D SEM EDN L 
Sbjct: 361 RGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRAKKKKIKTFNDMSEMEEDNNLL 420

Query: 421 LAEYDSEQDMEDTDCSEEAALDANTTEIETRD 452
           LA+ DSEQDMEDT CSEE +LDANT ++ETRD
Sbjct: 421 LADDDSEQDMEDTGCSEETSLDANTVDMETRD 452

[Close]
BLAST of CmoCh09G003810 vs. NCBI nr
Match: gi|659104080|ref|XP_008452800.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo])

HSP 1 Score: 762.7 bits (1968), Expect = 3.7e-217
Identity = 379/454 (83.48%), Postives = 416/454 (91.63%), Query Frame = 1 

Query: 1   MFMAVWIANSSKALVSNGYNVNSSRHLPFFCLNEFANYVCRNRFVDLWSWSQIRSMTSSK 60
           M MA WIANSSKAL+SN YN N SR L FF LNE ANY+CRN FV+ WSWSQIR MT+SK
Sbjct: 1   MIMAAWIANSSKALISNEYNANHSRFLQFFNLNELANYLCRNSFVESWSWSQIRLMTTSK 60

Query: 61  RVQDRSRLKRVQALEIATEKWKVAYKVLFLIETLKQEPEMIIPVRNLEQYRRQINLPKPH 120
           RVQDRSR KRVQ LE+ATEKWKVA+KVLFLIETLK+EPEMIIPVR+LE+YRR+INLPKPH
Sbjct: 61  RVQDRSRFKRVQDLEMATEKWKVAHKVLFLIETLKEEPEMIIPVRDLERYRRKINLPKPH 120

Query: 121 KIADFIRKSPKLFELYKDQRGILWCGMTKQAEDLMEEEETLIEQNADKAAEYVTRFLMMS 180
           +I++FIRKSP+LFELYKDQRG+LWCG+TKQAEDL+EEE  +IEQ+ADK AEYVTRFLMMS
Sbjct: 121 RISEFIRKSPELFELYKDQRGVLWCGLTKQAEDLVEEENKIIEQHADKVAEYVTRFLMMS 180

Query: 181 VNKRLPVDKIAHFRRDFGLPIDFRAKWVNDYPELFKLVKCEDEREYLELVSWNPAWAITE 240
           VNKRLPV+KIAHFRRDFGLP+DFRAKWV +YPELF++VK EDE EYLELVSWNPAWA+TE
Sbjct: 181 VNKRLPVNKIAHFRRDFGLPLDFRAKWVENYPELFRVVKSEDECEYLELVSWNPAWAVTE 240

Query: 241 LEKKLMGVTESTATHTPGLLSLPFPLKFPSNYKKMYRYGGKIDHFQKRSYLSPYADAREL 300
           LEKK M VTESTATHTPGLLSLPFP++FPSNYKKMYRY GKIDHFQKRSYLSPYADA  L
Sbjct: 241 LEKKFMDVTESTATHTPGLLSLPFPMRFPSNYKKMYRYRGKIDHFQKRSYLSPYADASGL 300

Query: 301 KAGSLEFDKRAVAVMHELLNFTMEKRLVTDHLTHFRRELVMPQKLMRLLLKHVGIFYVSE 360
           KAGSLEFDKRA+AVMHELL+FTMEKRLVTDHLTHFR+ELVMPQKLMRLLLKHVGIFYVSE
Sbjct: 301 KAGSLEFDKRAIAVMHELLSFTMEKRLVTDHLTHFRQELVMPQKLMRLLLKHVGIFYVSE 360

Query: 361 RGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSLAGYRGKRKRIKTFDDTSEM-EDNGLA 420
           RGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLS  GYR K+K+I+TF D SEM EDN L 
Sbjct: 361 RGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSHVGYRRKKKKIETFSDMSEMEEDNNLV 420

Query: 421 LAEYDSEQDMEDTDCSEEAALDANTTEIETRDLV 454
           LA+ DSEQDMEDT CSEE  LDANT ++ETRDL+
Sbjct: 421 LAKDDSEQDMEDTGCSEE-TLDANTVDMETRDLL 453

[Close]
BLAST of CmoCh09G003810 vs. NCBI nr
Match: gi|1009134419|ref|XP_015884436.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Ziziphus jujuba])

HSP 1 Score: 612.1 bits (1577), Expect = 8.0e-172
Identity = 310/412 (75.24%), Postives = 353/412 (85.68%), Query Frame = 1 

Query: 48  WSWS-QIRSMTSSKRVQDRSRLKRVQALEIATEKWKVAYKVLFLIETLKQEPEMIIPVRN 107
           W W  Q R MT+SKRVQDRS++KRV  LEI TEKWK+A KVLFL+E LK+EPEMIIPVR+
Sbjct: 19  WWWLIQNRLMTTSKRVQDRSKMKRVHDLEIVTEKWKIASKVLFLMEILKKEPEMIIPVRS 78

Query: 108 LEQYRRQINLPKPHKIADFIRKSPKLFELYKDQRGILWCGMTKQAEDLMEEEETLIEQNA 167
           LEQYRRQINLPKPHK++DFIRKSPKLFELYKD RG+LWCGMTK AEDL+EEEE ++E N 
Sbjct: 79  LEQYRRQINLPKPHKVSDFIRKSPKLFELYKDHRGVLWCGMTKLAEDLVEEEERILEGNE 138

Query: 168 DKAAEYVTRFLMMSVNKRLPVDKIAHFRRDFGLPIDFRAKWVNDYPELFKLVKCEDEREY 227
           + AAEYVTRFLMMSV+K LP+DKIAHFRRDFGLP+DFR  WV+ YP+ FK+ K EDE EY
Sbjct: 139 NNAAEYVTRFLMMSVDKMLPLDKIAHFRRDFGLPVDFRTSWVHKYPQHFKVAKNEDEAEY 198

Query: 228 LELVSWNPAWAITELEKKLMGVTESTATHTPGLLSLPFPLKFPSNYKKMYRYGGKIDHFQ 287
           L+LV+WNPAWAITELEKK MG+TES A HTPGLLSLPFPLKFP  YKK+YRYGGKI+HFQ
Sbjct: 199 LKLVNWNPAWAITELEKKTMGITESVA-HTPGLLSLPFPLKFPPYYKKVYRYGGKIEHFQ 258

Query: 288 KRSYLSPYADARELKAGSLEFDKRAVAVMHELLNFTMEKRLVTDHLTHFRRELVMPQKLM 347
           KR YLSPYADAR LKAGSLEFDKRAVAVMHELL+FT+EKRLVTDHLTHFRRELVMPQKLM
Sbjct: 259 KRCYLSPYADARGLKAGSLEFDKRAVAVMHELLSFTIEKRLVTDHLTHFRRELVMPQKLM 318

Query: 348 RLLLKHVGIFYVSERGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSLAGYRGKRKRIKT 407
           RLLLKH+GIFYVSERGKRFSVFLTEAYEG ELI K PLVLWKEKV SL GYRGK+K+I+T
Sbjct: 319 RLLLKHIGIFYVSERGKRFSVFLTEAYEGSELIKKGPLVLWKEKVQSLIGYRGKKKKIET 378

Query: 408 FDDTSEMEDNGLALAEYDSE------QDMEDTDCSEEAALDANTTEIETRDL 453
           F D S+MEDN L  ++ ++E      +  ED  C E+ +L  +  E+ET ++
Sbjct: 379 FTDMSDMEDNDLLESDSENESVSLQLEQEEDLGCLED-SLPIDNAEMETEEV 428

[Close]
BLAST of CmoCh09G003810 vs. NCBI nr
Match: gi|590574703|ref|XP_007012475.1| (Ubiquitin carboxyl-terminal hydrolase family protein [Theobroma cacao])

HSP 1 Score: 592.0 bits (1525), Expect = 8.6e-166
Identity = 304/437 (69.57%), Postives = 353/437 (80.78%), Query Frame = 1 

Query: 5   VWIANSSKALVSNGYNVNSSRHLPFFCLNEFANYVCRNRFVD-LWSWSQIRSMTSSKRVQ 64
           +W+  S K        + S+ H  F  L      V RN + + L+ W Q R+MTSS+RVQ
Sbjct: 10  LWLNKSGKT-----QRLRSNHHQMFGLLP-----VRRNLYQEPLFGWFQNRTMTSSRRVQ 69

Query: 65  DRSRLKRVQALEIATEKWKVAYKVLFLIETLKQEPEMIIPVRNLEQYRRQINLPKPHKIA 124
           DRS+ KR+  LEI  EKWK++ KVLFL+E LK+E EMIIPVR+L+QYR+QINLPKPHKI 
Sbjct: 70  DRSKNKRIHHLEIVKEKWKISSKVLFLMEVLKKEHEMIIPVRSLDQYRKQINLPKPHKIT 129

Query: 125 DFIRKSPKLFELYKDQRGILWCGMTKQAEDLMEEEETLIEQNADKAAEYVTRFLMMSVNK 184
           DFIRK PKLFELYKDQRG LWCGMTK+AEDL+EEEE LIE+ + KA E+VT+ LMMSV+K
Sbjct: 130 DFIRKCPKLFELYKDQRGTLWCGMTKEAEDLLEEEERLIEEQSTKAVEFVTKILMMSVDK 189

Query: 185 RLPVDKIAHFRRDFGLPIDFRAKWVNDYPELFKLVKCEDEREYLELVSWNPAWAITELEK 244
           R+ +DKIAHFRRDFGLPI+FRAKWVN YP+ F++VK +D  E+LELV+WNPAWAITELEK
Sbjct: 190 RIQLDKIAHFRRDFGLPIEFRAKWVNQYPQHFRVVKSKDGVEFLELVNWNPAWAITELEK 249

Query: 245 KLMGVTESTATHTPGLLSLPFPLKFPSNYKKMYRYGGKIDHFQKRSYLSPYADARELKAG 304
           K +G+ E      PGLLSLPFPLKFP NYKK+YR+GGKI HFQKRSYLSPYADARELKAG
Sbjct: 250 KALGLNEGIG-REPGLLSLPFPLKFPPNYKKLYRHGGKIAHFQKRSYLSPYADARELKAG 309

Query: 305 SLEFDKRAVAVMHELLNFTMEKRLVTDHLTHFRRELVMPQKLMRLLLKHVGIFYVSERGK 364
           SLEFDKRA+AVMHELL+FT+EKRLVTDHLTHFRRELVMPQKLMRLLLKH GIFYVSERGK
Sbjct: 310 SLEFDKRAIAVMHELLSFTIEKRLVTDHLTHFRRELVMPQKLMRLLLKHFGIFYVSERGK 369

Query: 365 RFSVFLTEAYEGPELIDKCPLVLWKEKVLSLAGYRGKRKRIKTFDDTSEMEDNGLALAEY 424
           RFSVFLTEAYEG ELI+KCPLVLWKEKVLSL GYRGK+K I TF D S+M++    L E 
Sbjct: 370 RFSVFLTEAYEGSELIEKCPLVLWKEKVLSLVGYRGKKKEIPTFSDLSDMDEKD--LIEV 429

Query: 425 DSEQDMEDTDCSEEAAL 441
           D+E D    +  EE  +
Sbjct: 430 DTENDSICAEFEEEETM 433

[Close]
BLAST of CmoCh09G003810 vs. NCBI nr
Match: gi|729328195|ref|XP_010535747.1| (PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Tarenaya hassleriana])

HSP 1 Score: 590.5 bits (1521), Expect = 2.5e-165
Identity = 289/388 (74.48%), Postives = 340/388 (87.63%), Query Frame = 1 

Query: 52  QIRSMTSSKRVQDRSRLKRVQALEIATEKWKVAYKVLFLIETLKQEPEMIIPVRNLEQYR 111
           ++RSMTSS+RVQDRS+ KRV  LEI TEKWK A KV+FL+ETLK+EPEMI+PVR+LEQYR
Sbjct: 42  RVRSMTSSRRVQDRSKEKRVHELEIVTEKWKTASKVIFLMETLKKEPEMIMPVRSLEQYR 101

Query: 112 RQINLPKPHKIADFIRKSPKLFELYKDQRGILWCGMTKQAEDLMEEEETLIEQNADKAAE 171
           RQINLPKPHKI+DFIRKSPKLFELYKDQRG+LWCGMTK+ EDL+EE++ L+E+N DKAAE
Sbjct: 102 RQINLPKPHKISDFIRKSPKLFELYKDQRGVLWCGMTKETEDLLEEQDRLLEENGDKAAE 161

Query: 172 YVTRFLMMSVNKRLPVDKIAHFRRDFGLPIDFRAKWVNDYPELFKLVKCEDEREYLELVS 231
           +VTRFLMMSV+K+L +DKIAHFRRDFGLP+DFR +WVN +P+ FK+V+  D  EYLELV+
Sbjct: 162 HVTRFLMMSVDKKLHLDKIAHFRRDFGLPLDFRKEWVNKFPQHFKVVESGDGEEYLELVA 221

Query: 232 WNPAWAITELEKKLMGVTESTATHTPGLLSLPFPLKFPSNYKKMYRYGGKIDHFQKRSYL 291
           WNP WAITELEKK++G+TE+T  H PG+LSL FP+KFP+ YKKMYRY GKI+HFQKRSYL
Sbjct: 222 WNPKWAITELEKKVLGLTEAT-DHKPGMLSLAFPMKFPAYYKKMYRYRGKIEHFQKRSYL 281

Query: 292 SPYADARELKAGSLEFDKRAVAVMHELLNFTMEKRLVTDHLTHFRRELVMPQKLMRLLLK 351
           SPYAD  +LKAGS EFDKRA+AVMHELL+FT+EKRLVTDHLTHFRRELVMPQKLMR+ LK
Sbjct: 282 SPYADPLDLKAGSKEFDKRAIAVMHELLSFTLEKRLVTDHLTHFRRELVMPQKLMRIFLK 341

Query: 352 HVGIFYVSERGKRFSVFLTEAYEGPELIDKCPLVLWKEKVLSLAGYRGKRKRIKTFDDTS 411
           H GIFYVSERGKRFSVFLTEAY+G ELI+KCPLVLWKEKVLSLAGYRG++K I T+ DT 
Sbjct: 342 HCGIFYVSERGKRFSVFLTEAYKGSELIEKCPLVLWKEKVLSLAGYRGRKKEIPTYRDTL 401

Query: 412 EMEDNGLALAEYDSEQDMEDTDCSEEAA 440
           EMED  L  +  + E    ++D  E A+
Sbjct: 402 EMEDENLLESGSEDETLTVESDREETAS 428

The following BLAST results are available for this feature:
BLAST of CmoCh09G003810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RPD1_ARATH3.9e-3328.09Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana GN=RPD1 PE=1 SV=1[more]
BLAST of CmoCh09G003810 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L0X8_CUCSA4.0e-21883.85Uncharacterized protein OS=Cucumis sativus GN=Csa_4G649630 PE=4 SV=1[more]
A0A061GSJ4_THECC6.0e-16669.57Ubiquitin carboxyl-terminal hydrolase family protein OS=Theobroma cacao GN=TCM_0... [more]
M4CDU9_BRARP6.6e-16573.26Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
A0A078DSZ5_BRANA3.3e-16475.07BnaA10g14300D protein OS=Brassica napus GN=BnaA10g14300D PE=4 SV=1[more]
A0A078FUE6_BRANA2.1e-16372.91BnaC09g36620D protein OS=Brassica napus GN=BnaC09g36620D PE=4 SV=1[more]
BLAST of CmoCh09G003810 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G21970.11.0e-16166.51 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT4G01037.19.2e-4933.94 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT4G08940.15.4e-4132.79 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT3G63090.15.9e-4030.94 Ubiquitin carboxyl-terminal hydrolase family protein[more]
AT1G79120.11.1e-3829.44 Ubiquitin carboxyl-terminal hydrolase family protein[more]
BLAST of CmoCh09G003810 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449447369|ref|XP_004141441.1|5.7e-21883.85PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis sativus][more]
gi|659104080|ref|XP_008452800.1|3.7e-21783.48PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Cucumis melo][more]
gi|1009134419|ref|XP_015884436.1|8.0e-17275.24PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Ziziphus jujuba][more]
gi|590574703|ref|XP_007012475.1|8.6e-16669.57Ubiquitin carboxyl-terminal hydrolase family protein [Theobroma cacao][more]
gi|729328195|ref|XP_010535747.1|2.5e-16574.48PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Tarenaya hassleriana][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR021099PORR_domain
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh09G003810.1CmoCh09G003810.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 69..398
score: 5.0E
NoneNo IPR availableunknownCoilCoilcoord: 151..171
scor
NoneNo IPR availablePANTHERPTHR31476FAMILY NOT NAMEDcoord: 51..452
score: 6.6E
NoneNo IPR availablePANTHERPTHR31476:SF8EXPRESSED PROTEINcoord: 51..452
score: 6.6E