MELO3C016627.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C016627.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
Location	chr06 : 25807651 .. 25808450 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGCTTATCTACTCTGTTTCCCCTTTATCCCTCTGTTTCATTCTTCACTCTGTTCTTCCATGGCTTCCTCACACCTCCATTTTCTCTCTACTCCAAATCCCATTCTTCTTCTCCCCCAATCTCATCCCTCTTTCACAACCCCATTACAAATTACATCAAAACGAGACCTCTCAATCAAATACAACTCACAAGATTCCGAATCCGACCCCAATTTCCCATCCCCAGATCCCAACTTCAGCGCTCTTAACCAACCAGAAACCTTCCCAATAGAGAAACGAAGAAGATCCGAAATACTCCGGCAAAGAAAACCCACAACAGAAATCGCAAAGCCGGAGCCACCCAACTTCGAAATCGGATGGAAAAGAACGAAAGAGATCAATCTTGAGAAGCCGATCGGGTGGATGATAATGGATTTTCTGGAAAAGTTAGAAGGGTTAATGGAGAGGGAATTTGGGTCGACGGAGTTGCTAGCGAAAGTGGGAGAGATTGTGGCGGAAAGGGCGAGAGAGGAGGCGGAGATTTTGCGAGACGACGGCAAAGTGGAGGAGAGAATGGTAACAGAGCTTTTTAGGGTTTTGAAATTGATGGAAATGGATTTGGCTATGGTGAAGGCGGCTGTGAAGGATGAGACATTGAGCGAACGCCTTGGTCAGGCTAAAGCAAGGTGTAGACAAGCTATACTTGTTGCTAATTCTTTTTGAGTTATATAACAAATTGTTGAGGCAATTCATTTCTCTTTGTAAAGTGTATCAATCCATTTTCGCCCTAATTCAAATTTAGTTTAGATTGTGCTTTGTGCC

mRNA sequence

AAGCTTATCTACTCTGTTTCCCCTTTATCCCTCTGTTTCATTCTTCACTCTGTTCTTCCATGGCTTCCTCACACCTCCATTTTCTCTCTACTCCAAATCCCATTCTTCTTCTCCCCCAATCTCATCCCTCTTTCACAACCCCATTACAAATTACATCAAAACGAGACCTCTCAATCAAATACAACTCACAAGATTCCGAATCCGACCCCAATTTCCCATCCCCAGATCCCAACTTCAGCGCTCTTAACCAACCAGAAACCTTCCCAATAGAGAAACGAAGAAGATCCGAAATACTCCGGCAAAGAAAACCCACAACAGAAATCGCAAAGCCGGAGCCACCCAACTTCGAAATCGGATGGAAAAGAACGAAAGAGATCAATCTTGAGAAGCCGATCGGGTGGATGATAATGGATTTTCTGGAAAAGTTAGAAGGGTTAATGGAGAGGGAATTTGGGTCGACGGAGTTGCTAGCGAAAGTGGGAGAGATTGTGGCGGAAAGGGCGAGAGAGGAGGCGGAGATTTTGCGAGACGACGGCAAAGTGGAGGAGAGAATGGTAACAGAGCTTTTTAGGGTTTTGAAATTGATGGAAATGGATTTGGCTATGGTGAAGGCGGCTGTGAAGGATGAGACATTGAGCGAACGCCTTGGTCAGGCTAAAGCAAGGTGTAGACAAGCTATACTTGTTGCTAATTCTTTTTGAGTTATATAACAAATTGTTGAGGCAATTCATTTCTCTTTGTAAAGTGTATCAATCCATTTTCGCCCTAATTCAAATTTAGTTTAGATTGTGCTTTGTGCC

Coding sequence (CDS)

ATGGCTTCCTCACACCTCCATTTTCTCTCTACTCCAAATCCCATTCTTCTTCTCCCCCAATCTCATCCCTCTTTCACAACCCCATTACAAATTACATCAAAACGAGACCTCTCAATCAAATACAACTCACAAGATTCCGAATCCGACCCCAATTTCCCATCCCCAGATCCCAACTTCAGCGCTCTTAACCAACCAGAAACCTTCCCAATAGAGAAACGAAGAAGATCCGAAATACTCCGGCAAAGAAAACCCACAACAGAAATCGCAAAGCCGGAGCCACCCAACTTCGAAATCGGATGGAAAAGAACGAAAGAGATCAATCTTGAGAAGCCGATCGGGTGGATGATAATGGATTTTCTGGAAAAGTTAGAAGGGTTAATGGAGAGGGAATTTGGGTCGACGGAGTTGCTAGCGAAAGTGGGAGAGATTGTGGCGGAAAGGGCGAGAGAGGAGGCGGAGATTTTGCGAGACGACGGCAAAGTGGAGGAGAGAATGGTAACAGAGCTTTTTAGGGTTTTGAAATTGATGGAAATGGATTTGGCTATGGTGAAGGCGGCTGTGAAGGATGAGACATTGAGCGAACGCCTTGGTCAGGCTAAAGCAAGGTGTAGACAAGCTATACTTGTTGCTAATTCTTTTTGA

Protein sequence

MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVKDETLSERLGQAKARCRQAILVANSF

Homology

[Close]

BLAST of MELO3C016627.2 vs. NCBI nr
Match: XP_008452345.1 (PREDICTED: uncharacterized protein LOC103493403 [Cucumis melo])

HSP 1 Score: 409.5 bits (1051), Expect = 7.2e-111
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFS 60
           MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFS
Sbjct: 1   MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFS 60

Query: 61  ALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFL 120
           ALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFL
Sbjct: 61  ALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFL 120

Query: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 180
           EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL
Sbjct: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 180

Query: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 214
           AMVKAAVKDETLSERLGQAKARCRQAILVANSF
Sbjct: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 213

[Close]

BLAST of MELO3C016627.2 vs. NCBI nr
Match: XP_004152910.1 (PREDICTED: uncharacterized protein LOC101210146 [Cucumis sativus])

HSP 1 Score: 398.7 bits (1023), Expect = 1.3e-107
Identity = 207/213 (97.18%), Postives = 211/213 (99.06%), Query Frame = 0


Query: 1   MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFS 60
           MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIK NSQDSESDPNFPSPDPNF 
Sbjct: 1   MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKCNSQDSESDPNFPSPDPNFG 60

Query: 61  ALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFL 120
           ALNQPETFPIEKRRRS+ILRQRKP+TEIAKPEPPNFEIGWKRTKEI++EKPIGWMIMDFL
Sbjct: 61  ALNQPETFPIEKRRRSDILRQRKPSTEIAKPEPPNFEIGWKRTKEISVEKPIGWMIMDFL 120

Query: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 180
           EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL
Sbjct: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 180

Query: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 214
           AMVKAAVKDETLSERLGQAKARCRQAILVANSF
Sbjct: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 213

[Close]

BLAST of MELO3C016627.2 vs. NCBI nr
Match: KGN56162.1 (hypothetical protein Csa_3G081380 [Cucumis sativus])

HSP 1 Score: 398.7 bits (1023), Expect = 1.3e-107
Identity = 207/213 (97.18%), Postives = 211/213 (99.06%), Query Frame = 0


Query: 1   MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFS 60
           MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIK NSQDSESDPNFPSPDPNF 
Sbjct: 20  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKCNSQDSESDPNFPSPDPNFG 79

Query: 61  ALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFL 120
           ALNQPETFPIEKRRRS+ILRQRKP+TEIAKPEPPNFEIGWKRTKEI++EKPIGWMIMDFL
Sbjct: 80  ALNQPETFPIEKRRRSDILRQRKPSTEIAKPEPPNFEIGWKRTKEISVEKPIGWMIMDFL 139

Query: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 180
           EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL
Sbjct: 140 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 199

Query: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 214
           AMVKAAVKDETLSERLGQAKARCRQAILVANSF
Sbjct: 200 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 232

[Close]

BLAST of MELO3C016627.2 vs. NCBI nr
Match: XP_022985263.1 (uncharacterized protein LOC111483306 [Cucurbita maxima])

HSP 1 Score: 350.9 bits (899), Expect = 3.0e-93
Identity = 180/213 (84.51%), Postives = 196/213 (92.02%), Query Frame = 0


Query: 1   MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFS 60
           MA  HLH L  PNP+LLLPQS P+FT PLQIT KR LS+K +S+ SESDPNFPSPDP+F 
Sbjct: 1   MACLHLHILCAPNPLLLLPQSQPTFTNPLQITPKRRLSLKCSSESSESDPNFPSPDPDFG 60

Query: 61  ALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFL 120
           ALNQPE+FP+EKRRRSEI+RQR+P+ EI KPEPPNFEIGWKRTKEINLEKP+GWMIMDFL
Sbjct: 61  ALNQPESFPVEKRRRSEIVRQRRPSKEIVKPEPPNFEIGWKRTKEINLEKPVGWMIMDFL 120

Query: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 180
           EKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKVE+RMVTELFRVLKLMEMDL
Sbjct: 121 EKLEELMEREFGSTELLAKVGEIVAERAREEAEILLDDGKVEDRMVTELFRVLKLMEMDL 180

Query: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 214
           AMVKAAV+DETL++RL QAKARCRQAILVANSF
Sbjct: 181 AMVKAAVQDETLTQRLAQAKARCRQAILVANSF 213

[Close]

BLAST of MELO3C016627.2 vs. NCBI nr
Match: XP_022932131.1 (uncharacterized protein LOC111438454 [Cucurbita moschata])

HSP 1 Score: 350.5 bits (898), Expect = 4.0e-93
Identity = 181/213 (84.98%), Postives = 196/213 (92.02%), Query Frame = 0


Query: 1   MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFS 60
           MA  HLH L  PNP+LLLP+S P+FT PLQIT KR LS+K +S+ SESDPNFPSP+P+F 
Sbjct: 1   MACLHLHLLCAPNPLLLLPRSQPTFTNPLQITPKRRLSLKCSSESSESDPNFPSPNPDFG 60

Query: 61  ALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFL 120
           ALNQPE+FPIEKRRRSEI+RQR+P+ +I KPEPPNFEIGWKRTKEINLEKP+GWMIMDFL
Sbjct: 61  ALNQPESFPIEKRRRSEIVRQRRPSKDIVKPEPPNFEIGWKRTKEINLEKPVGWMIMDFL 120

Query: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 180
           EKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKVE+RMVTELFRVLKLMEMDL
Sbjct: 121 EKLEELMEREFGSTELLAKVGEIVAERAREEAEILLDDGKVEDRMVTELFRVLKLMEMDL 180

Query: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 214
           AMVKAAVKDETLSERL QAKARCRQAILVANSF
Sbjct: 181 AMVKAAVKDETLSERLAQAKARCRQAILVANSF 213

[Close]

BLAST of MELO3C016627.2 vs. TAIR10
Match: AT1G51100.1 (unknown protein)

HSP 1 Score: 231.1 bits (588), Expect = 6.4e-61
Identity = 136/205 (66.34%), Postives = 154/205 (75.12%), Query Frame = 0


Query: 9   LSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFSALNQPETF 68
           LS+ N  + +P    SF   ++ T+K       N +  +   N  +P P        E F
Sbjct: 12  LSSKNLHIAVPIRTNSF---VRRTTKFSTKCSSNPESKDQFINL-TPAPESINTTSAEKF 71

Query: 69  PIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFLEKLEGLME 128
           PIEKRRRSEI+R R     I KPEPPNFEIGWKRTKEINLEKP G++IMDFLEK E LM 
Sbjct: 72  PIEKRRRSEIIRDR-TQRGIEKPEPPNFEIGWKRTKEINLEKPKGYVIMDFLEKFEALMA 131

Query: 129 REFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDLAMVKAAVK 188
           REFGS ELLAK GEIVAERAREEAE+LRD+GKVEERMVTELFRVLKLMEMDLAMVKA+VK
Sbjct: 132 REFGSKELLAKAGEIVAERAREEAEVLRDEGKVEERMVTELFRVLKLMEMDLAMVKASVK 191

Query: 189 DETLSERLGQAKARCRQAILVANSF 214
           DETLS+R+ QA+ARCRQAILVANSF
Sbjct: 192 DETLSQRIEQARARCRQAILVANSF 211

[Close]

BLAST of MELO3C016627.2 vs. TrEMBL
Match: tr|A0A1S3BT06|A0A1S3BT06_CUCME (uncharacterized protein LOC103493403 OS=Cucumis melo OX=3656 GN=LOC103493403 PE=4 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 4.8e-111
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0


Query: 1   MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFS 60
           MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFS
Sbjct: 1   MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFS 60

Query: 61  ALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFL 120
           ALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFL
Sbjct: 61  ALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFL 120

Query: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 180
           EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL
Sbjct: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 180

Query: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 214
           AMVKAAVKDETLSERLGQAKARCRQAILVANSF
Sbjct: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 213

[Close]

BLAST of MELO3C016627.2 vs. TrEMBL
Match: tr|A0A0A0L6D8|A0A0A0L6D8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G081380 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 8.4e-108
Identity = 207/213 (97.18%), Postives = 211/213 (99.06%), Query Frame = 0


Query: 1   MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFS 60
           MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIK NSQDSESDPNFPSPDPNF 
Sbjct: 20  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKCNSQDSESDPNFPSPDPNFG 79

Query: 61  ALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFL 120
           ALNQPETFPIEKRRRS+ILRQRKP+TEIAKPEPPNFEIGWKRTKEI++EKPIGWMIMDFL
Sbjct: 80  ALNQPETFPIEKRRRSDILRQRKPSTEIAKPEPPNFEIGWKRTKEISVEKPIGWMIMDFL 139

Query: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 180
           EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL
Sbjct: 140 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 199

Query: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 214
           AMVKAAVKDETLSERLGQAKARCRQAILVANSF
Sbjct: 200 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 232

[Close]

BLAST of MELO3C016627.2 vs. TrEMBL
Match: tr|A0A061F5E6|A0A061F5E6_THECC (Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 OS=Theobroma cacao OX=3641 GN=TCM_031092 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 4.1e-70
Identity = 156/216 (72.22%), Postives = 175/216 (81.02%), Query Frame = 0


Query: 1   MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSES---DPNFPSPDP 60
           MAS+ LHFLS P+ + L      S   PL  T      IK  S DS S    P+FPSP  
Sbjct: 49  MASTLLHFLSPPHHLYLSNLPIDSTVKPLHFT------IKCTSADSNSVPHQPDFPSPIS 108

Query: 61  NFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIM 120
           + + ++ P++FPIEKRRRSEILR+RKP  +IAKPEPPNFE+GWKRTKEINLEKP G++IM
Sbjct: 109 HDTTIS-PDSFPIEKRRRSEILRERKPRPDIAKPEPPNFEVGWKRTKEINLEKPKGYVIM 168

Query: 121 DFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLME 180
           DFLEKLEGLM REFGSTELLAK GEIVAERAREEAE+LRD+GKVEERMVTELFRVL+LME
Sbjct: 169 DFLEKLEGLMGREFGSTELLAKAGEIVAERAREEAEVLRDEGKVEERMVTELFRVLRLME 228

Query: 181 MDLAMVKAAVKDETLSERLGQAKARCRQAILVANSF 214
           MDLAMVKAAVK+ETL ERL QAKARCRQAILVANSF
Sbjct: 229 MDLAMVKAAVKEETLGERLEQAKARCRQAILVANSF 257

[Close]

BLAST of MELO3C016627.2 vs. TrEMBL
Match: tr|A0A2P5RYR0|A0A2P5RYR0_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD11147 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 2.2e-68
Identity = 154/216 (71.30%), Postives = 174/216 (80.56%), Query Frame = 0


Query: 1   MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDL--SIKYNSQDSE-SDPNFPSPDP 60
           MAS+ LHFLS PN    L  +H S  + +     + L   IK  S  SE S  +FPSP  
Sbjct: 1   MASTLLHFLSPPN----LLHNHTSNLSSISNNPSKTLHFPIKCTSPTSESSQSDFPSP-I 60

Query: 61  NFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIM 120
           +      PE+FPIEKRRRSEI+R+R+P  +IAKPEPPNFE+GW+RTKEINLEKP G++IM
Sbjct: 61  SHETTTSPESFPIEKRRRSEIVRERRPRPDIAKPEPPNFEVGWRRTKEINLEKPKGYVIM 120

Query: 121 DFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLME 180
           DFLEKLEGLM REFGSTELLAK GEIVAERAREEAE+LRD+G+VE+RMVTELFRVLKLME
Sbjct: 121 DFLEKLEGLMGREFGSTELLAKAGEIVAERAREEAEVLRDEGEVEDRMVTELFRVLKLME 180

Query: 181 MDLAMVKAAVKDETLSERLGQAKARCRQAILVANSF 214
           MDLAMVKAAVKDETLSERL QAKARCRQAILVANSF
Sbjct: 181 MDLAMVKAAVKDETLSERLEQAKARCRQAILVANSF 211

[Close]

BLAST of MELO3C016627.2 vs. TrEMBL
Match: tr|A0A2P5YHT2|A0A2P5YHT2_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA05451 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 6.5e-68
Identity = 153/216 (70.83%), Postives = 173/216 (80.09%), Query Frame = 0


Query: 1   MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDL--SIKYNSQDSE-SDPNFPSPDP 60
           MAS+ LHFLS PN    L  +H S  + +     + L   IK  S  SE S  +FPSP  
Sbjct: 1   MASTLLHFLSPPN----LLHNHTSNLSSISNNPSKTLHFPIKCTSPTSESSQSDFPSP-I 60

Query: 61  NFSALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIM 120
           +      PE+FPIEKRRRSEI+R+R+P  +IAKPEPPNFE+GW+RTKEINLEKP G++IM
Sbjct: 61  SHETTTSPESFPIEKRRRSEIVRERRPRPDIAKPEPPNFEVGWRRTKEINLEKPKGYVIM 120

Query: 121 DFLEKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLME 180
           DFLEKLEGLM REFGSTELLAK GEIVAERAREEAE+LRD+G+VE+RMVTE FRVLKLME
Sbjct: 121 DFLEKLEGLMGREFGSTELLAKAGEIVAERAREEAEVLRDEGEVEDRMVTEFFRVLKLME 180

Query: 181 MDLAMVKAAVKDETLSERLGQAKARCRQAILVANSF 214
           MDLAMVKAAVKDETLSERL QAKARCRQAILVANSF
Sbjct: 181 MDLAMVKAAVKDETLSERLEQAKARCRQAILVANSF 211

The following BLAST results are available for this feature:

BLAST of MELO3C016627.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452345.1	7.2e-111	100.00	PREDICTED: uncharacterized protein LOC103493403 [Cucumis melo]	[more]
XP_004152910.1	1.3e-107	97.18	PREDICTED: uncharacterized protein LOC101210146 [Cucumis sativus]	[more]
KGN56162.1	1.3e-107	97.18	hypothetical protein Csa_3G081380 [Cucumis sativus]	[more]
XP_022985263.1	3.0e-93	84.51	uncharacterized protein LOC111483306 [Cucurbita maxima]	[more]
XP_022932131.1	4.0e-93	84.98	uncharacterized protein LOC111438454 [Cucurbita moschata]	[more]

BLAST of MELO3C016627.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G51100.1	6.4e-61	66.34	unknown protein	[more]

BLAST of MELO3C016627.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of MELO3C016627.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BT06\|A0A1S3BT06_CUCME	4.8e-111	100.00	uncharacterized protein LOC103493403 OS=Cucumis melo OX=3656 GN=LOC103493403 PE=...	[more]
tr\|A0A0A0L6D8\|A0A0A0L6D8_CUCSA	8.4e-108	97.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G081380 PE=4 SV=1	[more]
tr\|A0A061F5E6\|A0A061F5E6_THECC	4.1e-70	72.22	Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 O...	[more]
tr\|A0A2P5RYR0\|A0A2P5RYR0_GOSBA	2.2e-68	71.30	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD11147 PE=4 SV...	[more]
tr\|A0A2P5YHT2\|A0A2P5YHT2_GOSBA	6.5e-68	70.83	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA05451 PE=4 SV...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C016627.2.1	MELO3C016627.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..82
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..65
None	No IPR available	PANTHER	PTHR36719	FAMILY NOT NAMED	coord: 1..213

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C016627.2	Csa3G081380	Cucumber (Chinese Long) v2	cumedB225
MELO3C016627.2	CSPI03G05420	Wild cucumber (PI 183967)	cpimedB226
MELO3C016627.2	CmaCh16G008430	Cucurbita maxima (Rimu)	cmamedB345
MELO3C016627.2	CmoCh16G009190	Cucurbita moschata (Rifu)	cmomedB325
MELO3C016627.2	Lsi05G006360	Bottle gourd (USVL1VR-Ls)	lsimedB387
MELO3C016627.2	Cp4.1LG00g00190	Cucurbita pepo (Zucchini)	cpemedB015
MELO3C016627.2	CsGy3G005540	Cucumber (Gy14) v2	cgybmedB203
MELO3C016627.2	Cla005262	Watermelon (97103) v1	medwmB437
MELO3C016627.2	ClCG10G005800	Watermelon (Charleston Gray)	medwcgB402
MELO3C016627.2	Cla97C10G189980	Watermelon (97103) v2	medwmbB416
MELO3C016627.2	Carg24828	Silver-seed gourd	carmedB0802
MELO3C016627.2	CsaV3_3G005480	Cucumber (Chinese Long) v3	cucmedB232

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C016627.2	Cucumber (Chinese Long) v3	cucmedB237