CmoCh16G009190 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh16G009190
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPotassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1
LocationCmo_Chr16 : 5556164 .. 5556805 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTGCTTACATCTCCACCTCCTGTGTGCCCCAAACCCCCTTCTTCTTCTTCCTCGATCTCAGCCCACTTTCACAAACCCATTACAAATTACACCCAAACGCCGCCTCTCACTCAAATGCAGCTCAGAATCCTCCGAATCCGACCCCAATTTCCCATCCCCAAATCCCGACTTCGGCGCCCTAAACCAACCAGAGAGCTTCCCAATCGAGAAGCGGAGGAGATCCGAAATAGTCCGCCAAAGAAGACCCTCAAAAGACATCGTGAAGCCGGAGCCACCCAACTTCGAAATTGGGTGGAAGAGGACGAAAGAGATCAATTTGGAGAAGCCGGTGGGGTGGATGATAATGGACTTTCTGGAGAAGCTGGAAGAGCTAATGGAGAGGGAGTTTGGGTCGACGGAGTTGCTTGCCAAAGTGGGAGAGATTGTAGCGGAGAGGGCGAGAGAGGAGGCGGAGATCTTGCTAGACGACGGCAAAGTGGAGGACAGAATGGTTACAGAGCTGTTTAGGGTGTTGAAGTTGATGGAGATGGATTTGGCTATGGTCAAGGCGGCTGTTAAAGATGAGACCTTGAGTGAGCGCCTTGCTCAGGCCAAAGCAAGGTGCAGGCAAGCTATACTTGTTGCTAATTCTTTCTAA

mRNA sequence

ATGGCTTGCTTACATCTCCACCTCCTGTGTGCCCCAAACCCCCTTCTTCTTCTTCCTCGATCTCAGCCCACTTTCACAAACCCATTACAAATTACACCCAAACGCCGCCTCTCACTCAAATGCAGCTCAGAATCCTCCGAATCCGACCCCAATTTCCCATCCCCAAATCCCGACTTCGGCGCCCTAAACCAACCAGAGAGCTTCCCAATCGAGAAGCGGAGGAGATCCGAAATAGTCCGCCAAAGAAGACCCTCAAAAGACATCGTGAAGCCGGAGCCACCCAACTTCGAAATTGGGTGGAAGAGGACGAAAGAGATCAATTTGGAGAAGCCGGTGGGGTGGATGATAATGGACTTTCTGGAGAAGCTGGAAGAGCTAATGGAGAGGGAGTTTGGGTCGACGGAGTTGCTTGCCAAAGTGGGAGAGATTGTAGCGGAGAGGGCGAGAGAGGAGGCGGAGATCTTGCTAGACGACGGCAAAGTGGAGGACAGAATGGTTACAGAGCTGTTTAGGGTGTTGAAGTTGATGGAGATGGATTTGGCTATGGTCAAGGCGGCTGTTAAAGATGAGACCTTGAGTGAGCGCCTTGCTCAGGCCAAAGCAAGGTGCAGGCAAGCTATACTTGTTGCTAATTCTTTCTAA

Coding sequence (CDS)

ATGGCTTGCTTACATCTCCACCTCCTGTGTGCCCCAAACCCCCTTCTTCTTCTTCCTCGATCTCAGCCCACTTTCACAAACCCATTACAAATTACACCCAAACGCCGCCTCTCACTCAAATGCAGCTCAGAATCCTCCGAATCCGACCCCAATTTCCCATCCCCAAATCCCGACTTCGGCGCCCTAAACCAACCAGAGAGCTTCCCAATCGAGAAGCGGAGGAGATCCGAAATAGTCCGCCAAAGAAGACCCTCAAAAGACATCGTGAAGCCGGAGCCACCCAACTTCGAAATTGGGTGGAAGAGGACGAAAGAGATCAATTTGGAGAAGCCGGTGGGGTGGATGATAATGGACTTTCTGGAGAAGCTGGAAGAGCTAATGGAGAGGGAGTTTGGGTCGACGGAGTTGCTTGCCAAAGTGGGAGAGATTGTAGCGGAGAGGGCGAGAGAGGAGGCGGAGATCTTGCTAGACGACGGCAAAGTGGAGGACAGAATGGTTACAGAGCTGTTTAGGGTGTTGAAGTTGATGGAGATGGATTTGGCTATGGTCAAGGCGGCTGTTAAAGATGAGACCTTGAGTGAGCGCCTTGCTCAGGCCAAAGCAAGGTGCAGGCAAGCTATACTTGTTGCTAATTCTTTCTAA
Homology
[Close]
BLAST of CmoCh16G009190 vs. TrEMBL
Match: A0A0A0L6D8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G081380 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 6.4e-94
Identity = 181/213 (84.98%), Postives = 198/213 (92.96%), Query Frame = 1 

Query: 1   MACLHLHLLCAPNPLLLLPRSQPTFTNPLQITPKRRLSLKCSSESSESDPNFPSPNPDFG 60
           MA  HLH L  PNP+LLLP+S P+FT PLQIT KR LS+KC+S+ SESDPNFPSP+P+FG
Sbjct: 20  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKCNSQDSESDPNFPSPDPNFG 79

Query: 61  ALNQPESFPIEKRRRSEIVRQRRPSKDIVKPEPPNFEIGWKRTKEINLEKPVGWMIMDFL 120
           ALNQPE+FPIEKRRRS+I+RQR+PS +I KPEPPNFEIGWKRTKEI++EKP+GWMIMDFL
Sbjct: 80  ALNQPETFPIEKRRRSDILRQRKPSTEIAKPEPPNFEIGWKRTKEISVEKPIGWMIMDFL 139

Query: 121 EKLEELMEREFGSTELLAKVGEIVAERAREEAEILLDDGKVEDRMVTELFRVLKLMEMDL 180
           EKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKVE+RMVTELFRVLKLMEMDL
Sbjct: 140 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 199

Query: 181 AMVKAAVKDETLSERLAQAKARCRQAILVANSF 214
           AMVKAAVKDETLSERL QAKARCRQAILVANSF
Sbjct: 200 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 232

[Close]
BLAST of CmoCh16G009190 vs. TrEMBL
Match: A0A0B2RWB5_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_001459 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.3e-67
Identity = 146/206 (70.87%), Postives = 168/206 (81.55%), Query Frame = 1 

Query: 12  PNPLLLLPRSQPTFTNP----LQITPKRRLSLKCSSESSESDPNFPSPNPDFGALNQPES 71
           P+PL L      T +NP    + I PK+  S++C+S  S  +  FP+P+P    +N  ES
Sbjct: 9   PSPLHLKTYPHKTSSNPSEFSIHIQPKKHFSIRCTSLDSIPEAEFPTPDPSSSTVNSAES 68

Query: 72  FPIEKRRRSEIVRQRRPSKDIVKPEPPNFEIGWKRTKEINLEKPVGWMIMDFLEKLEELM 131
           FPIEKRRRSEIVR+RR  K +V+PEPPNFEIGWKRTKEINLE+P+G +I DFLEKLE LM
Sbjct: 69  FPIEKRRRSEIVRERRGEK-LVQPEPPNFEIGWKRTKEINLERPIGHVIADFLEKLETLM 128

Query: 132 EREFGSTELLAKVGEIVAERAREEAEILLDDGKVEDRMVTELFRVLKLMEMDLAMVKAAV 191
           E+EFGSTELLAKVGEIVAERAREEAEIL+D+GKVE+RMVTELFRVLKLMEMDLAMVKAAV
Sbjct: 129 EKEFGSTELLAKVGEIVAERAREEAEILMDEGKVEERMVTELFRVLKLMEMDLAMVKAAV 188

Query: 192 KDETLSERLAQAKARCRQAILVANSF 214
           K+ETL ERL  AKARCRQAILVA SF
Sbjct: 189 KEETLGERLELAKARCRQAILVAYSF 213

[Close]
BLAST of CmoCh16G009190 vs. TrEMBL
Match: I1M3I8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G287300 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.3e-67
Identity = 146/206 (70.87%), Postives = 168/206 (81.55%), Query Frame = 1 

Query: 12  PNPLLLLPRSQPTFTNP----LQITPKRRLSLKCSSESSESDPNFPSPNPDFGALNQPES 71
           P+PL L      T +NP    + I PK+  S++C+S  S  +  FP+P+P    +N  ES
Sbjct: 9   PSPLHLKTYPHKTSSNPSEFSIHIQPKKHFSIRCTSLDSIPEAEFPTPDPSSSTVNSAES 68

Query: 72  FPIEKRRRSEIVRQRRPSKDIVKPEPPNFEIGWKRTKEINLEKPVGWMIMDFLEKLEELM 131
           FPIEKRRRSEIVR+RR  K +V+PEPPNFEIGWKRTKEINLE+P+G +I DFLEKLE LM
Sbjct: 69  FPIEKRRRSEIVRERRGEK-LVQPEPPNFEIGWKRTKEINLERPIGHVIADFLEKLETLM 128

Query: 132 EREFGSTELLAKVGEIVAERAREEAEILLDDGKVEDRMVTELFRVLKLMEMDLAMVKAAV 191
           E+EFGSTELLAKVGEIVAERAREEAEIL+D+GKVE+RMVTELFRVLKLMEMDLAMVKAAV
Sbjct: 129 EKEFGSTELLAKVGEIVAERAREEAEILMDEGKVEERMVTELFRVLKLMEMDLAMVKAAV 188

Query: 192 KDETLSERLAQAKARCRQAILVANSF 214
           K+ETL ERL  AKARCRQAILVA SF
Sbjct: 189 KEETLGERLELAKARCRQAILVAYSF 213

[Close]
BLAST of CmoCh16G009190 vs. TrEMBL
Match: A0A0J8BCB7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g092090 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 4.3e-66
Identity = 143/214 (66.82%), Postives = 166/214 (77.57%), Query Frame = 1 

Query: 4   LHLHLLCAPNPLLLLPRSQPTFTNPLQITPKRRLSLKCSSESSESDP----NFPSPNPDF 63
           LHL+LL       +     P+F  PL       +S KC++ SS S P    NFP+P+P+F
Sbjct: 15  LHLNLLHPNQTFYISSHPSPSF--PLPHQKLSLISTKCTTNSSLSQPEPADNFPTPSPEF 74

Query: 64  GALNQPESFPIEKRRRSEIVRQRRPSKDIVKPEPPNFEIGWKRTKEINLEKPVGWMIMDF 123
            A   P+ FPIEKRR+SEI+R R+    ++KPEPPNFEIGWKRTK INLEKP G++IMDF
Sbjct: 75  EATTPPDQFPIEKRRKSEIIRDRKARTGVIKPEPPNFEIGWKRTKPINLEKPTGYVIMDF 134

Query: 124 LEKLEELMEREFGSTELLAKVGEIVAERAREEAEILLDDGKVEDRMVTELFRVLKLMEMD 183
           L+K E LM+REFGS ELLAK GEIVAERAREEAE+L D+GKVEDRMVTELFRVLKLMEMD
Sbjct: 135 LDKFEGLMDREFGSIELLAKAGEIVAERAREEAEVLRDEGKVEDRMVTELFRVLKLMEMD 194

Query: 184 LAMVKAAVKDETLSERLAQAKARCRQAILVANSF 214
           LAMVKAAVK+ETL ER+ QAKARCRQAILVANSF
Sbjct: 195 LAMVKAAVKEETLIERIQQAKARCRQAILVANSF 226

[Close]
BLAST of CmoCh16G009190 vs. TrEMBL
Match: G7IJL4_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_2g082930 PE=2 SV=1)

HSP 1 Score: 258.5 bits (659), Expect = 7.4e-66
Identity = 134/182 (73.63%), Postives = 159/182 (87.36%), Query Frame = 1 

Query: 34  KRRLSLKCSS--ESSESDPNFPSPNPDFGALNQPESFPIEKRRRSEIVRQRRPSKDIVKP 93
           K+   +KC++   S+ S+P FP+P+P    +N PE+FPIEKRRRSEI+RQRRP+ D+   
Sbjct: 34  KKHFIIKCTTPLNSTSSEPEFPTPDPTNTTMNSPETFPIEKRRRSEIIRQRRPNTDLANA 93

Query: 94  EPPNFEIGWKRTKEINLEKPVGWMIMDFLEKLEELMEREFGSTELLAKVGEIVAERAREE 153
           EPPNFEIGWKRTKEINLEKPVG+++ DFLEKLEELM++EFGSTELLAKVGEIVAERAREE
Sbjct: 94  EPPNFEIGWKRTKEINLEKPVGYVVADFLEKLEELMKKEFGSTELLAKVGEIVAERAREE 153

Query: 154 AEILLDDGKVEDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLAQAKARCRQAILVAN 213
           AEIL D+GKVE+RMV ELFRVL+LMEMDLAMVKA+VK++TL+ERL QAKARCRQAILV  
Sbjct: 154 AEILRDEGKVEERMVVELFRVLRLMEMDLAMVKASVKEDTLNERLDQAKARCRQAILVCY 213

[Close]
BLAST of CmoCh16G009190 vs. TAIR10
Match: AT1G51100.1 (AT1G51100.1 unknown protein)

HSP 1 Score: 233.4 bits (594), Expect = 1.3e-61
Identity = 130/179 (72.63%), Postives = 144/179 (80.45%), Query Frame = 1 

Query: 36  RLSLKCSSESSESDPNFP-SPNPDFGALNQPESFPIEKRRRSEIVRQRRPSKDIVKPEPP 95
           + S KCSS     D     +P P+       E FPIEKRRRSEI+R R   + I KPEPP
Sbjct: 34  KFSTKCSSNPESKDQFINLTPAPESINTTSAEKFPIEKRRRSEIIRDRT-QRGIEKPEPP 93

Query: 96  NFEIGWKRTKEINLEKPVGWMIMDFLEKLEELMEREFGSTELLAKVGEIVAERAREEAEI 155
           NFEIGWKRTKEINLEKP G++IMDFLEK E LM REFGS ELLAK GEIVAERAREEAE+
Sbjct: 94  NFEIGWKRTKEINLEKPKGYVIMDFLEKFEALMAREFGSKELLAKAGEIVAERAREEAEV 153

Query: 156 LLDDGKVEDRMVTELFRVLKLMEMDLAMVKAAVKDETLSERLAQAKARCRQAILVANSF 214
           L D+GKVE+RMVTELFRVLKLMEMDLAMVKA+VKDETLS+R+ QA+ARCRQAILVANSF
Sbjct: 154 LRDEGKVEERMVTELFRVLKLMEMDLAMVKASVKDETLSQRIEQARARCRQAILVANSF 211

[Close]
BLAST of CmoCh16G009190 vs. NCBI nr
Match: gi|449470411|ref|XP_004152910.1| (PREDICTED: uncharacterized protein LOC101210146 [Cucumis sativus])

HSP 1 Score: 351.7 bits (901), Expect = 9.2e-94
Identity = 181/213 (84.98%), Postives = 198/213 (92.96%), Query Frame = 1 

Query: 1   MACLHLHLLCAPNPLLLLPRSQPTFTNPLQITPKRRLSLKCSSESSESDPNFPSPNPDFG 60
           MA  HLH L  PNP+LLLP+S P+FT PLQIT KR LS+KC+S+ SESDPNFPSP+P+FG
Sbjct: 1   MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKCNSQDSESDPNFPSPDPNFG 60

Query: 61  ALNQPESFPIEKRRRSEIVRQRRPSKDIVKPEPPNFEIGWKRTKEINLEKPVGWMIMDFL 120
           ALNQPE+FPIEKRRRS+I+RQR+PS +I KPEPPNFEIGWKRTKEI++EKP+GWMIMDFL
Sbjct: 61  ALNQPETFPIEKRRRSDILRQRKPSTEIAKPEPPNFEIGWKRTKEISVEKPIGWMIMDFL 120

Query: 121 EKLEELMEREFGSTELLAKVGEIVAERAREEAEILLDDGKVEDRMVTELFRVLKLMEMDL 180
           EKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKVE+RMVTELFRVLKLMEMDL
Sbjct: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 180

Query: 181 AMVKAAVKDETLSERLAQAKARCRQAILVANSF 214
           AMVKAAVKDETLSERL QAKARCRQAILVANSF
Sbjct: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 213

[Close]
BLAST of CmoCh16G009190 vs. NCBI nr
Match: gi|700201029|gb|KGN56162.1| (hypothetical protein Csa_3G081380 [Cucumis sativus])

HSP 1 Score: 351.7 bits (901), Expect = 9.2e-94
Identity = 181/213 (84.98%), Postives = 198/213 (92.96%), Query Frame = 1 

Query: 1   MACLHLHLLCAPNPLLLLPRSQPTFTNPLQITPKRRLSLKCSSESSESDPNFPSPNPDFG 60
           MA  HLH L  PNP+LLLP+S P+FT PLQIT KR LS+KC+S+ SESDPNFPSP+P+FG
Sbjct: 20  MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKCNSQDSESDPNFPSPDPNFG 79

Query: 61  ALNQPESFPIEKRRRSEIVRQRRPSKDIVKPEPPNFEIGWKRTKEINLEKPVGWMIMDFL 120
           ALNQPE+FPIEKRRRS+I+RQR+PS +I KPEPPNFEIGWKRTKEI++EKP+GWMIMDFL
Sbjct: 80  ALNQPETFPIEKRRRSDILRQRKPSTEIAKPEPPNFEIGWKRTKEISVEKPIGWMIMDFL 139

Query: 121 EKLEELMEREFGSTELLAKVGEIVAERAREEAEILLDDGKVEDRMVTELFRVLKLMEMDL 180
           EKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKVE+RMVTELFRVLKLMEMDL
Sbjct: 140 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 199

Query: 181 AMVKAAVKDETLSERLAQAKARCRQAILVANSF 214
           AMVKAAVKDETLSERL QAKARCRQAILVANSF
Sbjct: 200 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 232

[Close]
BLAST of CmoCh16G009190 vs. NCBI nr
Match: gi|659102847|ref|XP_008452345.1| (PREDICTED: uncharacterized protein LOC103493403 [Cucumis melo])

HSP 1 Score: 348.2 bits (892), Expect = 1.0e-92
Identity = 181/213 (84.98%), Postives = 196/213 (92.02%), Query Frame = 1 

Query: 1   MACLHLHLLCAPNPLLLLPRSQPTFTNPLQITPKRRLSLKCSSESSESDPNFPSPNPDFG 60
           MA  HLH L  PNP+LLLP+S P+FT PLQIT KR LS+K +S+ SESDPNFPSP+P+F 
Sbjct: 1   MASSHLHFLSTPNPILLLPQSHPSFTTPLQITSKRDLSIKYNSQDSESDPNFPSPDPNFS 60

Query: 61  ALNQPESFPIEKRRRSEIVRQRRPSKDIVKPEPPNFEIGWKRTKEINLEKPVGWMIMDFL 120
           ALNQPE+FPIEKRRRSEI+RQR+P+ +I KPEPPNFEIGWKRTKEINLEKP+GWMIMDFL
Sbjct: 61  ALNQPETFPIEKRRRSEILRQRKPTTEIAKPEPPNFEIGWKRTKEINLEKPIGWMIMDFL 120

Query: 121 EKLEELMEREFGSTELLAKVGEIVAERAREEAEILLDDGKVEDRMVTELFRVLKLMEMDL 180
           EKLE LMEREFGSTELLAKVGEIVAERAREEAEIL DDGKVE+RMVTELFRVLKLMEMDL
Sbjct: 121 EKLEGLMEREFGSTELLAKVGEIVAERAREEAEILRDDGKVEERMVTELFRVLKLMEMDL 180

Query: 181 AMVKAAVKDETLSERLAQAKARCRQAILVANSF 214
           AMVKAAVKDETLSERL QAKARCRQAILVANSF
Sbjct: 181 AMVKAAVKDETLSERLGQAKARCRQAILVANSF 213

[Close]
BLAST of CmoCh16G009190 vs. NCBI nr
Match: gi|356549829|ref|XP_003543293.1| (PREDICTED: uncharacterized protein LOC100804209 [Glycine max])

HSP 1 Score: 264.2 bits (674), Expect = 1.9e-67
Identity = 146/206 (70.87%), Postives = 168/206 (81.55%), Query Frame = 1 

Query: 12  PNPLLLLPRSQPTFTNP----LQITPKRRLSLKCSSESSESDPNFPSPNPDFGALNQPES 71
           P+PL L      T +NP    + I PK+  S++C+S  S  +  FP+P+P    +N  ES
Sbjct: 9   PSPLHLKTYPHKTSSNPSEFSIHIQPKKHFSIRCTSLDSIPEAEFPTPDPSSSTVNSAES 68

Query: 72  FPIEKRRRSEIVRQRRPSKDIVKPEPPNFEIGWKRTKEINLEKPVGWMIMDFLEKLEELM 131
           FPIEKRRRSEIVR+RR  K +V+PEPPNFEIGWKRTKEINLE+P+G +I DFLEKLE LM
Sbjct: 69  FPIEKRRRSEIVRERRGEK-LVQPEPPNFEIGWKRTKEINLERPIGHVIADFLEKLETLM 128

Query: 132 EREFGSTELLAKVGEIVAERAREEAEILLDDGKVEDRMVTELFRVLKLMEMDLAMVKAAV 191
           E+EFGSTELLAKVGEIVAERAREEAEIL+D+GKVE+RMVTELFRVLKLMEMDLAMVKAAV
Sbjct: 129 EKEFGSTELLAKVGEIVAERAREEAEILMDEGKVEERMVTELFRVLKLMEMDLAMVKAAV 188

Query: 192 KDETLSERLAQAKARCRQAILVANSF 214
           K+ETL ERL  AKARCRQAILVA SF
Sbjct: 189 KEETLGERLELAKARCRQAILVAYSF 213

[Close]
BLAST of CmoCh16G009190 vs. NCBI nr
Match: gi|731364938|ref|XP_010694250.1| (PREDICTED: uncharacterized protein LOC104907080 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 259.2 bits (661), Expect = 6.2e-66
Identity = 143/214 (66.82%), Postives = 166/214 (77.57%), Query Frame = 1 

Query: 4   LHLHLLCAPNPLLLLPRSQPTFTNPLQITPKRRLSLKCSSESSESDP----NFPSPNPDF 63
           LHL+LL       +     P+F  PL       +S KC++ SS S P    NFP+P+P+F
Sbjct: 15  LHLNLLHPNQTFYISSHPSPSF--PLPHQKLSLISTKCTTNSSLSQPEPADNFPTPSPEF 74

Query: 64  GALNQPESFPIEKRRRSEIVRQRRPSKDIVKPEPPNFEIGWKRTKEINLEKPVGWMIMDF 123
            A   P+ FPIEKRR+SEI+R R+    ++KPEPPNFEIGWKRTK INLEKP G++IMDF
Sbjct: 75  EATTPPDQFPIEKRRKSEIIRDRKARTGVIKPEPPNFEIGWKRTKPINLEKPTGYVIMDF 134

Query: 124 LEKLEELMEREFGSTELLAKVGEIVAERAREEAEILLDDGKVEDRMVTELFRVLKLMEMD 183
           L+K E LM+REFGS ELLAK GEIVAERAREEAE+L D+GKVEDRMVTELFRVLKLMEMD
Sbjct: 135 LDKFEGLMDREFGSIELLAKAGEIVAERAREEAEVLRDEGKVEDRMVTELFRVLKLMEMD 194

Query: 184 LAMVKAAVKDETLSERLAQAKARCRQAILVANSF 214
           LAMVKAAVK+ETL ER+ QAKARCRQAILVANSF
Sbjct: 195 LAMVKAAVKEETLIERIQQAKARCRQAILVANSF 226

The following BLAST results are available for this feature:
BLAST of CmoCh16G009190 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmoCh16G009190 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L6D8_CUCSA6.4e-9484.98Uncharacterized protein OS=Cucumis sativus GN=Csa_3G081380 PE=4 SV=1[more]
A0A0B2RWB5_GLYSO1.3e-6770.87Uncharacterized protein OS=Glycine soja GN=glysoja_001459 PE=4 SV=1[more]
I1M3I8_SOYBN1.3e-6770.87Uncharacterized protein OS=Glycine max GN=GLYMA_13G287300 PE=4 SV=1[more]
A0A0J8BCB7_BETVU4.3e-6666.82Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g092090 PE=4 S... [more]
G7IJL4_MEDTR7.4e-6673.63Uncharacterized protein OS=Medicago truncatula GN=MTR_2g082930 PE=2 SV=1[more]
BLAST of CmoCh16G009190 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G51100.11.3e-6172.63 unknown protein[more]
BLAST of CmoCh16G009190 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449470411|ref|XP_004152910.1|9.2e-9484.98PREDICTED: uncharacterized protein LOC101210146 [Cucumis sativus][more]
gi|700201029|gb|KGN56162.1|9.2e-9484.98hypothetical protein Csa_3G081380 [Cucumis sativus][more]
gi|659102847|ref|XP_008452345.1|1.0e-9284.98PREDICTED: uncharacterized protein LOC103493403 [Cucumis melo][more]
gi|356549829|ref|XP_003543293.1|1.9e-6770.87PREDICTED: uncharacterized protein LOC100804209 [Glycine max][more]
gi|731364938|ref|XP_010694250.1|6.2e-6666.82PREDICTED: uncharacterized protein LOC104907080 [Beta vulgaris subsp. vulgaris][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh16G009190.1CmoCh16G009190.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36719FAMILY NOT NAMEDcoord: 1..213
score: 4.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh16G009190Cucsa.059630Cucumber (Gy14) v1cgycmoB0075
CmoCh16G009190CmaCh16G008430Cucurbita maxima (Rimu)cmacmoB324
CmoCh16G009190Cla005262Watermelon (97103) v1cmowmB289
CmoCh16G009190Csa3G081380Cucumber (Chinese Long) v2cmocuB309
CmoCh16G009190MELO3C016627Melon (DHL92) v3.5.1cmomeB293
CmoCh16G009190ClCG10G005800Watermelon (Charleston Gray)cmowcgB274
CmoCh16G009190CSPI03G05420Wild cucumber (PI 183967)cmocpiB317
CmoCh16G009190Lsi05G006360Bottle gourd (USVL1VR-Ls)cmolsiB301
CmoCh16G009190Cp4.1LG00g00190Cucurbita pepo (Zucchini)cmocpeB301
CmoCh16G009190MELO3C016627.2Melon (DHL92) v3.6.1cmomedB325
CmoCh16G009190CsaV3_3G005480Cucumber (Chinese Long) v3cmocucB0372
CmoCh16G009190Cla97C10G189980Watermelon (97103) v2cmowmbB317
CmoCh16G009190CsGy3G005540Cucumber (Gy14) v2cgybcmoB303
CmoCh16G009190Carg24828Silver-seed gourdcarcmoB1069
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh16G009190Cucurbita moschata (Rifu)cmocmoB285
CmoCh16G009190Cucurbita moschata (Rifu)cmocmoB290
CmoCh16G009190Cucurbita maxima (Rimu)cmacmoB700
CmoCh16G009190Cucurbita maxima (Rimu)cmacmoB704
CmoCh16G009190Melon (DHL92) v3.5.1cmomeB283
CmoCh16G009190Cucurbita pepo (Zucchini)cmocpeB317
CmoCh16G009190Bottle gourd (USVL1VR-Ls)cmolsiB306
CmoCh16G009190Melon (DHL92) v3.6.1cmomedB322
CmoCh16G009190Silver-seed gourdcarcmoB0921
CmoCh16G009190Watermelon (97103) v2cmowmbB329
CmoCh16G009190Wax gourdcmowgoB0406
CmoCh16G009190Wax gourdcmowgoB0450