MELO3C016544 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C016544
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	NADH pyrophosphatase
Location	chr6 : 27068098 .. 27068304 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTGCTTCTGTTTTCTGATCAATCAAAAGAGAAAGGTACGACAAACGAAGCCAGTGGCTGGAACGTGCTCCCGTTGCGGACGAGGAGCTCAGGTGGCGGACATGGAAACCTCCACCACATTTTGCCGGATTCCCATCCACTCCACTTCATGGAAGGCCATCATTTGTTCTACTTGTGGTGCTCTTCTTAAATCCTATAGATAA

mRNA sequence

ATGGTTTGCTTCTGTTTTCTGATCAATCAAAAGAGAAAGGTACGACAAACGAAGCCAGTGGCTGGAACGTGCTCCCGTTGCGGACGAGGAGCTCAGGTGGCGGACATGGAAACCTCCACCACATTTTGCCGGATTCCCATCCACTCCACTTCATGGAAGGCCATCATTTGTTCTACTTGTGGTGCTCTTCTTAAATCCTATAGATAA

Coding sequence (CDS)

ATGGTTTGCTTCTGTTTTCTGATCAATCAAAAGAGAAAGGTACGACAAACGAAGCCAGTGGCTGGAACGTGCTCCCGTTGCGGACGAGGAGCTCAGGTGGCGGACATGGAAACCTCCACCACATTTTGCCGGATTCCCATCCACTCCACTTCATGGAAGGCCATCATTTGTTCTACTTGTGGTGCTCTTCTTAAATCCTATAGATAA

Protein sequence

MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTCGALLKSYR*

Homology

[Close]

BLAST of MELO3C016544 vs. TrEMBL
Match: A0A0A0L6J9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G099780 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 3.3e-31
Identity = 65/68 (95.59%), Postives = 68/68 (100.00%), Query Frame = 1


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFLI+QKRKVRQTKPVAGTCSRCGRGAQVA+M+TSTTFCRIPIHSTSWKAIICSTC
Sbjct: 1  MVCFCFLIHQKRKVRQTKPVAGTCSRCGRGAQVAEMKTSTTFCRIPIHSTSWKAIICSTC 60

Query: 61 GALLKSYR 69
          GALLKSYR
Sbjct: 61 GALLKSYR 68

[Close]

BLAST of MELO3C016544 vs. TrEMBL
Match: A0A087H9U4_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G175000 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 3.9e-24
Identity = 51/68 (75.00%), Postives = 61/68 (89.71%), Query Frame = 1


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFL++QKRKV+ TKP AGTCSRCGRGA+VADM+TST FC IPI+  SW+AI+CS C
Sbjct: 1  MVCFCFLVDQKRKVKATKPAAGTCSRCGRGARVADMKTSTRFCLIPIYCRSWRAIVCSFC 60

Query: 61 GALLKSYR 69
          G++LKSYR
Sbjct: 61 GSVLKSYR 68

[Close]

BLAST of MELO3C016544 vs. TrEMBL
Match: B3H6H2_ARATH (Uncharacterized protein OS=Arabidopsis thaliana GN=At3g15534 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.5e-23
Identity = 50/68 (73.53%), Postives = 61/68 (89.71%), Query Frame = 1


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFL++QKRKV+ +KP AGTCSRCGRGA+VADM+TST FC IPI+  SW+AI+CS C
Sbjct: 1  MVCFCFLVDQKRKVKGSKPAAGTCSRCGRGARVADMKTSTRFCLIPIYCRSWRAIVCSFC 60

Query: 61 GALLKSYR 69
          G++LKSYR
Sbjct: 61 GSVLKSYR 68

[Close]

BLAST of MELO3C016544 vs. TrEMBL
Match: A0A059BMG8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01087 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.5e-23
Identity = 49/68 (72.06%), Postives = 61/68 (89.71%), Query Frame = 1


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFL++Q+RKVR++KPVAGTCSRCGRGA VADM+T+T FC +P +  SWKA+IC+ C
Sbjct: 1  MVCFCFLVDQERKVRRSKPVAGTCSRCGRGASVADMKTATRFCYVPFYWKSWKAVICTFC 60

Query: 61 GALLKSYR 69
          GA+LKSYR
Sbjct: 61 GAVLKSYR 68

[Close]

BLAST of MELO3C016544 vs. TrEMBL
Match: M5X0U8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014087mg PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.3e-23
Identity = 49/68 (72.06%), Postives = 60/68 (88.24%), Query Frame = 1


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFL++Q+RKVR++KPVAGTCSRCGRGA VAD+ TST FC +P +  SWKAI+C+ C
Sbjct: 21 MVCFCFLVDQRRKVRRSKPVAGTCSRCGRGASVADLRTSTRFCYVPFYWKSWKAIMCTFC 80

Query: 61 GALLKSYR 69
          GA+LKSYR
Sbjct: 81 GAILKSYR 88

[Close]

BLAST of MELO3C016544 vs. TAIR10
Match: AT3G15534.1 (AT3G15534.1 unknown protein)

HSP 1 Score: 116.3 bits (290), Expect = 7.4e-27
Identity = 50/68 (73.53%), Postives = 59/68 (86.76%), Query Frame = 1


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFL++QKRKV+ +KP AGTCSRCGRGA+VADM+TST FC IPI+  SW+AI+CS C
Sbjct: 1  MVCFCFLVDQKRKVKGSKPAAGTCSRCGRGARVADMKTSTRFCLIPIYCRSWRAIVCSFC 60

Query: 61 GALLKSYR 69
          G++LKSYR
Sbjct: 61 GSVLKSYR 68

[Close]

BLAST of MELO3C016544 vs. TAIR10
Match: AT1G52855.1 (AT1G52855.1 unknown protein)

HSP 1 Score: 107.5 bits (267), Expect = 3.4e-24
Identity = 45/68 (66.18%), Postives = 56/68 (82.35%), Query Frame = 1


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFL++Q RKV+++KP AGTCSRCG  A +ADM+TST FC IPI+  SW+A++CS C
Sbjct: 1  MVCFCFLVDQTRKVKRSKPAAGTCSRCGHCASIADMKTSTRFCFIPIYWRSWRAVVCSFC 60

Query: 61 GALLKSYR 69
          G++LKSYR
Sbjct: 61 GSVLKSYR 68

[Close]

BLAST of MELO3C016544 vs. TAIR10
Match: AT2G20835.1 (AT2G20835.1 unknown protein)

HSP 1 Score: 98.2 bits (243), Expect = 2.1e-21
Identity = 42/67 (62.69%), Postives = 49/67 (73.13%), Query Frame = 1


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          M  FCFL++Q++KVR  KP AG CSRCG GA VADM TST FC +P +  +WKAI+C  C
Sbjct: 1  MAIFCFLVDQRKKVRGRKPAAGLCSRCGGGAVVADMRTSTRFCGVPFYRKAWKAIVCHIC 60

Query: 61 GALLKSY 68
          GA+LKSY
Sbjct: 61 GAVLKSY 67

[Close]

BLAST of MELO3C016544 vs. TAIR10
Match: AT5G10695.1 (AT5G10695.1 unknown protein)

HSP 1 Score: 48.1 bits (113), Expect = 2.5e-06
Identity = 21/63 (33.33%), Postives = 30/63 (47.62%), Query Frame = 1


Query: 2  VCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTCG 61
          +C  F+ +Q  +V       G C  CG   QV D+ +   FC +P+ + S +  +CSTCG
Sbjct: 1  MCLVFVCDQDERVIGRYAAPGACPYCGGAVQVVDVNSQWRFCFVPLSNKSKRRHLCSTCG 60

Query: 62 ALL 65
            L
Sbjct: 61 KRL 63

[Close]

BLAST of MELO3C016544 vs. NCBI nr
Match: gi|659102719|ref|XP_008452279.1| (PREDICTED: uncharacterized protein LOC103493350 [Cucumis melo])

HSP 1 Score: 146.7 bits (369), Expect = 1.5e-32
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 1


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC
Sbjct: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60

Query: 61 GALLKSYR 69
          GALLKSYR
Sbjct: 61 GALLKSYR 68

[Close]

BLAST of MELO3C016544 vs. NCBI nr
Match: gi|778676287|ref|XP_011650561.1| (PREDICTED: uncharacterized protein LOC101205611 [Cucumis sativus])

HSP 1 Score: 141.7 bits (356), Expect = 4.7e-31
Identity = 65/68 (95.59%), Postives = 68/68 (100.00%), Query Frame = 1


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFLI+QKRKVRQTKPVAGTCSRCGRGAQVA+M+TSTTFCRIPIHSTSWKAIICSTC
Sbjct: 1  MVCFCFLIHQKRKVRQTKPVAGTCSRCGRGAQVAEMKTSTTFCRIPIHSTSWKAIICSTC 60

Query: 61 GALLKSYR 69
          GALLKSYR
Sbjct: 61 GALLKSYR 68

[Close]

BLAST of MELO3C016544 vs. NCBI nr
Match: gi|674246131|gb|KFK38896.1| (hypothetical protein AALP_AA3G175000 [Arabis alpina])

HSP 1 Score: 118.2 bits (295), Expect = 5.5e-24
Identity = 51/68 (75.00%), Postives = 61/68 (89.71%), Query Frame = 1


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFL++QKRKV+ TKP AGTCSRCGRGA+VADM+TST FC IPI+  SW+AI+CS C
Sbjct: 1  MVCFCFLVDQKRKVKATKPAAGTCSRCGRGARVADMKTSTRFCLIPIYCRSWRAIVCSFC 60

Query: 61 GALLKSYR 69
          G++LKSYR
Sbjct: 61 GSVLKSYR 68

[Close]

BLAST of MELO3C016544 vs. NCBI nr
Match: gi|186510105|ref|NP_001118636.1| (uncharacterized protein [Arabidopsis thaliana])

HSP 1 Score: 116.3 bits (290), Expect = 2.1e-23
Identity = 50/68 (73.53%), Postives = 61/68 (89.71%), Query Frame = 1


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFL++QKRKV+ +KP AGTCSRCGRGA+VADM+TST FC IPI+  SW+AI+CS C
Sbjct: 1  MVCFCFLVDQKRKVKGSKPAAGTCSRCGRGARVADMKTSTRFCLIPIYCRSWRAIVCSFC 60

Query: 61 GALLKSYR 69
          G++LKSYR
Sbjct: 61 GSVLKSYR 68

[Close]

BLAST of MELO3C016544 vs. NCBI nr
Match: gi|702364586|ref|XP_010060519.1| (PREDICTED: uncharacterized protein LOC104448410 [Eucalyptus grandis])

HSP 1 Score: 115.5 bits (288), Expect = 3.6e-23
Identity = 49/68 (72.06%), Postives = 61/68 (89.71%), Query Frame = 1


Query: 1  MVCFCFLINQKRKVRQTKPVAGTCSRCGRGAQVADMETSTTFCRIPIHSTSWKAIICSTC 60
          MVCFCFL++Q+RKVR++KPVAGTCSRCGRGA VADM+T+T FC +P +  SWKA+IC+ C
Sbjct: 1  MVCFCFLVDQERKVRRSKPVAGTCSRCGRGASVADMKTATRFCYVPFYWKSWKAVICTFC 60

Query: 61 GALLKSYR 69
          GA+LKSYR
Sbjct: 61 GAVLKSYR 68

The following BLAST results are available for this feature:

BLAST of MELO3C016544 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6J9_CUCSA	3.3e-31	95.59	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G099780 PE=4 SV=1	[more]
A0A087H9U4_ARAAL	3.9e-24	75.00	Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G175000 PE=4 SV=1	[more]
B3H6H2_ARATH	1.5e-23	73.53	Uncharacterized protein OS=Arabidopsis thaliana GN=At3g15534 PE=4 SV=1	[more]
A0A059BMG8_EUCGR	2.5e-23	72.06	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F01087 PE=4 SV=1	[more]
M5X0U8_PRUPE	3.3e-23	72.06	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014087mg PE=4 SV=1	[more]

BLAST of MELO3C016544 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15534.1	7.4e-27	73.53	unknown protein	[more]
AT1G52855.1	3.4e-24	66.18	unknown protein	[more]
AT2G20835.1	2.1e-21	62.69	unknown protein	[more]
AT5G10695.1	2.5e-06	33.33	unknown protein	[more]

BLAST of MELO3C016544 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102719\|ref\|XP_008452279.1\|	1.5e-32	100.00	PREDICTED: uncharacterized protein LOC103493350 [Cucumis melo]	[more]
gi\|778676287\|ref\|XP_011650561.1\|	4.7e-31	95.59	PREDICTED: uncharacterized protein LOC101205611 [Cucumis sativus]	[more]
gi\|674246131\|gb\|KFK38896.1\|	5.5e-24	75.00	hypothetical protein AALP_AA3G175000 [Arabis alpina]	[more]
gi\|186510105\|ref\|NP_001118636.1\|	2.1e-23	73.53	uncharacterized protein [Arabidopsis thaliana]	[more]
gi\|702364586\|ref\|XP_010060519.1\|	3.6e-23	72.06	PREDICTED: uncharacterized protein LOC104448410 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C016544T1	MELO3C016544T1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33320	FAMILY NOT NAMED	coord: 1..68 score: 6.0
None	No IPR available	PANTHER	PTHR33320:SF5	SUBFAMILY NOT NAMED	coord: 1..68 score: 6.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C016544	Csa3G099780	Cucumber (Chinese Long) v2	cumeB244
MELO3C016544	Cla97C10G190550	Watermelon (97103) v2	mewmbB431
MELO3C016544	Cucsa.074570	Cucumber (Gy14) v1	cgymeB076
MELO3C016544	CmaCh16G008010	Cucurbita maxima (Rimu)	cmameB292
MELO3C016544	CsaV3_3G006060	Cucumber (Chinese Long) v3	cucmeB248

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C016544	Silver-seed gourd	carmeB0223
MELO3C016544	Silver-seed gourd	carmeB0670
MELO3C016544	Cucumber (Chinese Long) v3	cucmeB083
MELO3C016544	Watermelon (97103) v2	mewmbB433
MELO3C016544	Wax gourd	mewgoB502
MELO3C016544	Melon (DHL92) v3.5.1	memeB073
MELO3C016544	Cucumber (Gy14) v1	cgymeB200
MELO3C016544	Cucurbita maxima (Rimu)	cmameB689
MELO3C016544	Cucurbita moschata (Rifu)	cmomeB285
MELO3C016544	Cucurbita moschata (Rifu)	cmomeB680
MELO3C016544	Wild cucumber (PI 183967)	cpimeB078
MELO3C016544	Wild cucumber (PI 183967)	cpimeB242
MELO3C016544	Cucumber (Chinese Long) v2	cumeB077
MELO3C016544	Watermelon (97103) v1	mewmB457
MELO3C016544	Watermelon (Charleston Gray)	mewcgB416
MELO3C016544	Watermelon (Charleston Gray)	mewcgB426
MELO3C016544	Watermelon (97103) v1	mewmB458
MELO3C016544	Cucurbita pepo (Zucchini)	cpemeB186
MELO3C016544	Cucurbita pepo (Zucchini)	cpemeB409
MELO3C016544	Bottle gourd (USVL1VR-Ls)	lsimeB380
MELO3C016544	Cucumber (Gy14) v2	cgybmeB069
MELO3C016544	Cucumber (Gy14) v2	cgybmeB211