MELO3C016057 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C016057
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionUDP-glucose 6-dehydrogenase
Locationchr1 : 31610273 .. 31610518 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCCTAATTCTCCTATTGGGATGTTTCAGATGATGGAATTACATAAACAAGTTGTAGAAAATGAGAATGGGTATCAATACTCTTTTGAACAAAAGGTTGTCAAAAAGCGAGCTCGACGATCCGTTAAGAAAGCTGAAGGTCCAAGTCCTTCAATGGCAAATCGAAACCGAATGACGTGGTTTGACATTAAATCTTTATTGTGTCTGTGTATTGTTTTTGGCTTGTTGATGGGAAGTGAATGA

mRNA sequence

ATGGCTCCTAATTCTCCTATTGGGATGTTTCAGATGATGGAATTACATAAACAAGTTGTAGAAAATGAGAATGGGTATCAATACTCTTTTGAACAAAAGGTTGTCAAAAAGCGAGCTCGACGATCCGTTAAGAAAGCTGAAGGTCCAAGTCCTTCAATGGCAAATCGAAACCGAATGACGTGGTTTGACATTAAATCTTTATTGTGTCTGTGTATTGTTTTTGGCTTGTTGATGGGAAGTGAATGA

Coding sequence (CDS)

ATGGCTCCTAATTCTCCTATTGGGATGTTTCAGATGATGGAATTACATAAACAAGTTGTAGAAAATGAGAATGGGTATCAATACTCTTTTGAACAAAAGGTTGTCAAAAAGCGAGCTCGACGATCCGTTAAGAAAGCTGAAGGTCCAAGTCCTTCAATGGCAAATCGAAACCGAATGACGTGGTTTGACATTAAATCTTTATTGTGTCTGTGTATTGTTTTTGGCTTGTTGATGGGAAGTGAATGA

Protein sequence

MAPNSPIGMFQMMELHKQVVENENGYQYSFEQKVVKKRARRSVKKAEGPSPSMANRNRMTWFDIKSLLCLCIVFGLLMGSE*
Homology
[Close]
BLAST of MELO3C016057 vs. TrEMBL
Match: A0A0A0K934_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G394070 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 8.9e-20
Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = 1 

Query: 1  MAPNSPIGMFQMMELHKQVVENENGYQYSFEQKVVKKRARRSVKKAEGPSPSMANRNRMT 60
          MAPNSPIGMFQM E ++QVVEN+NGY+YSFEQK+VKKRARRS K+AEGPSPSMANR+RMT
Sbjct: 32 MAPNSPIGMFQMTE-YQQVVENKNGYRYSFEQKIVKKRARRSKKEAEGPSPSMANRSRMT 91

Query: 61 WFDI 65
           F I
Sbjct: 92 CFII 94

[Close]
BLAST of MELO3C016057 vs. NCBI nr
Match: gi|700189654|gb|KGN44887.1| (hypothetical protein Csa_7G394070 [Cucumis sativus])

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-19
Identity = 52/64 (81.25%), Postives = 59/64 (92.19%), Query Frame = 1 

Query: 1  MAPNSPIGMFQMMELHKQVVENENGYQYSFEQKVVKKRARRSVKKAEGPSPSMANRNRMT 60
          MAPNSPIGMFQM E ++QVVEN+NGY+YSFEQK+VKKRARRS K+AEGPSPSMANR+RMT
Sbjct: 32 MAPNSPIGMFQMTE-YQQVVENKNGYRYSFEQKIVKKRARRSKKEAEGPSPSMANRSRMT 91

Query: 61 WFDI 65
           F I
Sbjct: 92 CFII 94

The following BLAST results are available for this feature:
BLAST of MELO3C016057 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K934_CUCSA8.9e-2081.25Uncharacterized protein OS=Cucumis sativus GN=Csa_7G394070 PE=4 SV=1[more]
BLAST of MELO3C016057 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700189654|gb|KGN44887.1|1.3e-1981.25hypothetical protein Csa_7G394070 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C016057T1MELO3C016057T1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C016057Csa7G394070Cucumber (Chinese Long) v2cumeB532
MELO3C016057BhiUN245G39Wax gourdmewgoB204
MELO3C016057CSPI07G17030Wild cucumber (PI 183967)cpimeB540
MELO3C016057Lsi02G023600Bottle gourd (USVL1VR-Ls)lsimeB192
MELO3C016057CsGy7G015470Cucumber (Gy14) v2cgybmeB470
MELO3C016057CsaV3_7G028790Cucumber (Chinese Long) v3cucmeB550
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C016057Silver-seed gourdcarmeB0110
MELO3C016057Silver-seed gourdcarmeB0848
MELO3C016057Cucumber (Gy14) v1cgymeB604