MELO3C015378 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C015378
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Sec-independent protein translocase protein TatA
Location	chr2 : 1199683 .. 1203328 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATCCCACGTGAAAAAGATTGATACAAAAAATTTCAAAGCCCCCAAATAAAATTAATCAAAATGAGATGAGAAGCATTCCCTAAACCGATAAAGATTCCCAAATTTCCAATCAAAGATTTTTCTCCTCAACGACGAAGGCGACCATGGTGATTTCAACTCCAACTCTATCCTTTACTTCTTCCATTCCAAAGCTTCCTCCATCTCTTTCTCCTTCATTTTCCTCTTCTAAATCCGCCTTCTTCGCCAACAATGCCACCGTCAGTTTCTTCACCAACGGTGACCATAACCATTCTTCGCTACTGCGTTTGACCAGCTTCAGAACTACCACCAAAACAACTCATAAGGGTCTCACTTGTAATGCTTTGTTTGGTCTTGGAGTGCCTGAACTTGTTGTAATCGCTGGTGTTGCAGCTTTGGTTTTTGGGCCTAAGAAGTTGCCTGAAGTTGGGAAGAGTATTGGGAAAACAGTCAAGAGCTTCCAACAGGTATGTTTGTGGTTTTAGTTGATTGGGTCAGATTGGATGCTCTGGAATTGTGTAATTGTTTGGGATTTGAAATGGGGATTCGGGGAAATGAAGTTTTTTTTTTTTTTTAACTGAATTTGGATTGTGTGCGCGATGTTTGAGTTTCACTTGGCTTGTCCACTAATACAGAAAAGTAATTGATAATTGTTGTTTTGGGTTTATTTTGACTAACTAGTTAGCAAAATTAACCCTTCTTTTCGTGGCTACATGAGAAGCAACAATCTTGAATTAGTTGAGTTGTCGATTTATTAGCTTTGTCCAAAGTATTACTGAAAGTATTCCCTAAGATTGAGCTGTCTATGAATTTATTTTTCTGGCTGGGCGACTGTGTGGGAGAATGAGCTTTATTAAAGTTCAAATTTTAGAATTTTACGTCATTCTAATATGTAAAATCTTCCAGCCTTGCGAGTTCTGTTCTTTGTCCTTGATCCTTTGTTGTAGTTTTCTTCAACTAATGCATTCTGAAAGTACTTTTGTTAATTGAAGTTTTGCGAAGTTTTGGATGTTTTGCTTTTGGATCATGAATAATCCGATCTAGTCATCAGTCATGTTAGACTAAATGGTATATGTAATATTTCCAGGATCCTTACTGGATATCTCTCTGTTGAATATTGTTTCTTATGTTTTTACGAATGCTTTTCAATTCATTTATTCTTAGTAGGTGGTGTTTTTAATGGACGTGAAATCTTGTTTCCTTTTCCTTTGTCTTTAAACTACGCGGGAGTCTTTTGCTGATATTTCCAGAGTGGAAAAATGGGATATGCATTCTCCAATTAAGAAACGTCAACAAACTCTTAATCTTGAGAAAATTTCTTTTCTACCTTCACCCTTTCTTTAGTATTGCAAATGGCAGTAGAGATCTTCATAGGGCGGGGCCCCATCCTGTCCTCAGGGAATAGATGCCCTGGATGGAATGCCCCCAAGTCATGATCGTAGTCCCTGCGTCTTCTCATTGATGTCGTTCGAGGGCTTCTCTCTCCAAACTTAGAACTGTAAAGTCAAGCTCATTCTTCTCTGAACGGCTTGTTCGTGACAAAATATCTCTTTACTTGATGTAGCTACCCGATGGGTAATGGGTCTTCTCGTCTTCCCCCTCAAAGATTAGTACCTCAGGTTTCCTCAATTCTATATTGAATAACAGCACCTCACAAGTGCTAGGAGCGTTCTCTGTTTCATTGGTATGCCTTTTCTCTCTCATTGCACTTTTAGCCGGTCGTTTGCCTCTATTCATGTGTGTCTGTTCAAGGGAGCCTGAACTACCTCCATCTCTGGTTTCCCCCTTCCTTCTAGGCTACGCCTTTTATCCTCACATTATTTACTGTTCCAATCTCTAGCCTAACTCTTCCTGGATTCGGGTGAATTCATTTGCTATCATGGCTTCTACTCCATGTTCGATTTGGATAAACTTTTGATCCATCTTTTGAATCTTCGCAATATACCTAGGCCTGGTAGTATGTGTGGTACTTACTACATGAACATTAACGTTCTTTGATTATGCTGTTGTTATGGTATGATTTCCCATCGTATTCAATACAATTTAAAATCTTCGTTAATTTCCATTTTCTTTGATGAGAAATCAAGCTGGATGAAAATATGAAAAAAAATACTGAAAAAGAGAAAAGAAATGGAGTACATAAAAAAGACAACGCAACTAACAAAAGAGGAGCATCAAATCTAGAGTATATAGAATGGGCTTGAGCCCGACTAAAGGTTATTGTGAATTTCATTAATTCATCTATGTTTAGGAATGACAAACTTTTTTATCTTTCTAATTGAACAGTGTTTGGGGCCTTGGGGTAAGAGATTTGAACTTCTGATCTCTCAATCAAGTGTAAATATCTAAACTAGTTGATAAGTTGGCGACGGCCACTTTTGTCATAGAAAAAATACCTCCTACGTAATAGTATCATGCTTGGGAGCATGTAAAAATGTTCTTAGAAAAAAGCAAAGCACCTTGAAGTAGGTTGTTATAGAGTGTGTTTAGTCTAAACGGCTGAATGCAAAGTACTTTTAAGAATGTAGAACTAAACATTTAACTGATTTCTTTTAAACAATTTTAAAGTAATGTAGCTAAAACTACTTTAAAAGCACTCTGAAACATAAATTGAGAGTCTAAGACCGTCACATTTGTTAGTGTTGAGTTAGAGAAAGTTATTGTGGAATGAGGATACAGTAATCTTCAGTTCATACTTCATAGTTCGTTGTAGATGATTAATTAATGTATGGGTCTATTTCTAAGAAATCAACAACTCCGTCAATTATACACCCTTAAAACAGCTACCTAGTATTTTGTTGATGAAGCATGTTTTCTGTCTTTTTTCATCAATAGAGTCAAGTATTAGGAAAACTTCAATTGCTCAATTTGTTAGAAAAATCAGCAAAACGACGCTTCAATATTTCAACTTTGGTAGTTGGAGGAATAATGTTGCTAATATTATTGCAGGCAGCTAAGGAGTTCGAGTCCGAGCTGAAGAAAGAACCTGAGCCAACCGAAGAGACTTCAGTAGAAAAGCCTACATCAACGGAAGCAGAGAAGAGACAAGATTTGAAGGTATCAAACCAAAAAGAGACTGTATGAAGCGGTAGGTAGTCCATCATTTCCACATCTACATTTATCATTGTGTTTTATGTATTATGAGAATCAGTTACTGGAATCTGAAGATCACTTAATGAAGAAAATTAGTTTTCCAGTGCTGGACTCTGATGGATACCATAATCCACTCTAATTAGATCAAAAGGAAATATAAGCTATAACCTCAACTAGGCCGATCTGAGAGGGCAACTTCTCTCCCTACCAACAACATAATATCTGAACTTCCCTTTACAACATCCTTTTTACCCTTCATTTTTCTCTTTTTCACGACCGATGCAAATTTCATTTTTCATTACTGCACGTTCTAATATATTACATAGGATACTATCAACAGAGAATTTATATGCTTGTTGAATACTTGAATTCAAAACTCTTCCTCCCTGGTTATTAGCTTTTAGAATTTTCATGCCAAGTCTGAATTCTGCTATCTCTGAGCTATCCTTTTTTGGATGGTGGAGATTATTTGGTTATTGATTTGAATTCCTGACTTGGTTGAAGATTTGGAAAATACCAATTTCATTTCAAAGT

mRNA sequence

AATCCCACGTGAAAAAGATTGATACAAAAAATTTCAAAGCCCCCAAATAAAATTAATCAAAATGAGATGAGAAGCATTCCCTAAACCGATAAAGATTCCCAAATTTCCAATCAAAGATTTTTCTCCTCAACGACGAAGGCGACCATGGTGATTTCAACTCCAACTCTATCCTTTACTTCTTCCATTCCAAAGCTTCCTCCATCTCTTTCTCCTTCATTTTCCTCTTCTAAATCCGCCTTCTTCGCCAACAATGCCACCGTCAGTTTCTTCACCAACGGTGACCATAACCATTCTTCGCTACTGCGTTTGACCAGCTTCAGAACTACCACCAAAACAACTCATAAGGGTCTCACTTGTAATGCTTTGTTTGGTCTTGGAGTGCCTGAACTTGTTGTAATCGCTGGTGTTGCAGCTTTGGTTTTTGGGCCTAAGAAGTTGCCTGAAGTTGGGAAGAGTATTGGGAAAACAGTCAAGAGCTTCCAACAGGCAGCTAAGGAGTTCGAGTCCGAGCTGAAGAAAGAACCTGAGCCAACCGAAGAGACTTCAGTAGAAAAGCCTACATCAACGGAAGCAGAGAAGAGACAAGATTTGAAGGTATCAAACCAAAAAGAGACTGTATGAAGCGGTAGGTAGTCCATCATTTCCACATCTACATTTATCATTGTGTTTTATGTATTATGAGAATCAGTTACTGGAATCTGAAGATCACTTAATGAAGAAAATTAGTTTTCCAGTGCTGGACTCTGATGGATACCATAATCCACTCTAATTAGATCAAAAGGAAATATAAGCTATAACCTCAACTAGGCCGATCTGAGAGGGCAACTTCTCTCCCTACCAACAACATAATATCTGAACTTCCCTTTACAACATCCTTTTTACCCTTCATTTTTCTCTTTTTCACGACCGATGCAAATTTCATTTTTCATTACTGCACGTTCTAATATATTACATAGGATACTATCAACAGAGAATTTATATGCTTGTTGAATACTTGAATTCAAAACTCTTCCTCCCTGGTTATTAGCTTTTAGAATTTTCATGCCAAGTCTGAATTCTGCTATCTCTGAGCTATCCTTTTTTGGATGGTGGAGATTATTTGGTTATTGATTTGAATTCCTGACTTGGTTGAAGATTTGGAAAATACCAATTTCATTTCAAAGT

Coding sequence (CDS)

ATGGTGATTTCAACTCCAACTCTATCCTTTACTTCTTCCATTCCAAAGCTTCCTCCATCTCTTTCTCCTTCATTTTCCTCTTCTAAATCCGCCTTCTTCGCCAACAATGCCACCGTCAGTTTCTTCACCAACGGTGACCATAACCATTCTTCGCTACTGCGTTTGACCAGCTTCAGAACTACCACCAAAACAACTCATAAGGGTCTCACTTGTAATGCTTTGTTTGGTCTTGGAGTGCCTGAACTTGTTGTAATCGCTGGTGTTGCAGCTTTGGTTTTTGGGCCTAAGAAGTTGCCTGAAGTTGGGAAGAGTATTGGGAAAACAGTCAAGAGCTTCCAACAGGCAGCTAAGGAGTTCGAGTCCGAGCTGAAGAAAGAACCTGAGCCAACCGAAGAGACTTCAGTAGAAAAGCCTACATCAACGGAAGCAGAGAAGAGACAAGATTTGAAGGTATCAAACCAAAAAGAGACTGTATGA

Protein sequence

MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRTTTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV*

Homology

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BLAST of MELO3C015378 vs. Swiss-Prot
Match: TATA_PEA (Sec-independent protein translocase protein TATA, chloroplastic OS=Pisum sativum GN=TATA PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 6.1e-34
Identity = 92/152 (60.53%), Postives = 106/152 (69.74%), Query Frame = 1


Query: 7   TLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRTTTKTTH 66
           TLS +SS   +P  L  S   S  +F ++N+          N SSLL L   R  T+TT 
Sbjct: 4   TLSISSS-SVIPTRLPNSSCYSNLSFLSSNS----------NTSSLL-LKKARIKTRTT- 63

Query: 67  KGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE 126
           KG TCNA FGLGVPELVVIAGVAALVFGPKKLPEVG+SIG+TVKSFQQAAKEFE+ELKKE
Sbjct: 64  KGFTCNAFFGLGVPELVVIAGVAALVFGPKKLPEVGRSIGQTVKSFQQAAKEFETELKKE 123

Query: 127 PEPTEETSVEKPTSTEAEKRQDLKVSNQKETV 159
           P PTEE SV    ++E EK Q++KVS+ K+ V
Sbjct: 124 PNPTEEISV----ASEQEK-QEIKVSSTKDNV 137

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BLAST of MELO3C015378 vs. Swiss-Prot
Match: TATA_ARATH (Sec-independent protein translocase protein TATA, chloroplastic OS=Arabidopsis thaliana GN=TATA PE=1 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 1.1e-32
Identity = 81/141 (57.45%), Postives = 94/141 (66.67%), Query Frame = 1


Query: 18  PPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRTTTKTTHKGLTCNALFGL 77
           PP   P  SSS+S+FF+N  TV+   N     +  L     R   + T K LTCNALFGL
Sbjct: 12  PPVSLPLLSSSRSSFFSNCFTVTTRPN-----TRSLVAIGRRIRQEPTRKPLTCNALFGL 71

Query: 78  GVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPEPTEETSVEK 137
           GVPEL VIAGVAAL+FGPKKLPE+GKSIGKTVKSFQQAAKEFESELK EPE +   S + 
Sbjct: 72  GVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPEESVAESSQV 131

Query: 138 PTSTEAEKRQDLKVSNQKETV 159
            TS + E+++    S+ KE V
Sbjct: 132 ATSNKEEEKKTEVSSSSKENV 147

[Close]

BLAST of MELO3C015378 vs. Swiss-Prot
Match: TATA_MAIZE (Sec-independent protein translocase protein TATA, chloroplastic OS=Zea mays GN=TATA PE=1 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.4e-24
Identity = 58/90 (64.44%), Postives = 68/90 (75.56%), Query Frame = 1


Query: 69  LTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEP- 128
           L C  LFGLGVPEL VIAGVAALVFGPK+LPE+G+SIGKTVKSFQQAAKEFE+ELKKEP 
Sbjct: 80  LGCKCLFGLGVPELAVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAAKEFETELKKEPG 139

Query: 129 EPTEETSVEKPTSTEAEKRQDLKVSNQKET 158
           E  ++     PT+    + + L+ S+ KE+
Sbjct: 140 EGGDQPPPATPTAVSGGEEKGLEASSSKES 169

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BLAST of MELO3C015378 vs. Swiss-Prot
Match: TATA_ORYSJ (Sec-independent protein translocase protein TATA, chloroplastic OS=Oryza sativa subsp. japonica GN=TATA PE=2 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 2.2e-23
Identity = 59/94 (62.77%), Postives = 70/94 (74.47%), Query Frame = 1


Query: 71  CNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE---- 130
           C  LFGLGVPELVVIAGVAALVFGPK+LPE+G+SIGKTVKSFQQAAKEFE+ELKKE    
Sbjct: 81  CKCLFGLGVPELVVIAGVAALVFGPKQLPEIGRSIGKTVKSFQQAAKEFETELKKESDDG 140

Query: 131 ---PEPTEETSVEKPTSTEAEKRQDLKVSNQKET 158
              P P  ET+V     ++  + ++L+ S+ KE+
Sbjct: 141 GDQPPPPTETAV-----SDGGEEKELEASSSKES 169

[Close]

BLAST of MELO3C015378 vs. Swiss-Prot
Match: TATA_SYNP6 (Sec-independent protein translocase protein TatA OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=tatA PE=3 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.3e-15
Identity = 40/86 (46.51%), Postives = 58/86 (67.44%), Query Frame = 1


Query: 75  FGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPEPTEETS 134
           FG+G+PE++VI  +A LVFGPKKLPE+G+S+GK ++ FQ A++EFESE+K+E + T  T 
Sbjct: 4   FGIGLPEMLVILAIALLVFGPKKLPEIGRSLGKALRGFQDASREFESEIKREIDRTPATP 63

Query: 135 VE---KPTSTEAEKRQDLKVSNQKET 158
            E   +P   ++   + + V  Q ET
Sbjct: 64  AEATVEPPVLDSAPTEAVTVEKQTET 89

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BLAST of MELO3C015378 vs. TrEMBL
Match: A0A0A0LWL1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G573670 PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 1.6e-78
Identity = 153/158 (96.84%), Postives = 155/158 (98.10%), Query Frame = 1


Query: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRT 60
           MVIS+PTLSFTSSIPKLPPSLSPSFSSSKSAFFANNAT SFFT GDHNHSSLLRLTSFRT
Sbjct: 1   MVISSPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRT 60

Query: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           TTKTTHKG TCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TTKTTHKGFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV 159
           SELKKEPEPTEETSVEKPTSTEAE+RQDLKVSNQKETV
Sbjct: 121 SELKKEPEPTEETSVEKPTSTEAEERQDLKVSNQKETV 158

[Close]

BLAST of MELO3C015378 vs. TrEMBL
Match: M5WDC7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012899mg PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.2e-40
Identity = 98/150 (65.33%), Postives = 112/150 (74.67%), Query Frame = 1


Query: 9   SFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRTTTKTTH-- 68
           SFT S P+ P SL   FSSS+S F  NNAT S F N +  +S  L L   RT T+T    
Sbjct: 5   SFTLSTPRSPLSLP--FSSSQSTFLTNNATTSLFPNKNKVNSGALVLGRTRTRTRTERVK 64

Query: 69  KGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE 128
           KGLTCNALFGLG+PELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE+ELKKE
Sbjct: 65  KGLTCNALFGLGMPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFETELKKE 124

Query: 129 PEPTEETSVEKPTSTEAEKRQDLKVSNQKE 157
           PE   ET    PT+   E++Q++KVS+ +E
Sbjct: 125 PEALTET----PTAVSEEEKQEVKVSSSQE 148

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BLAST of MELO3C015378 vs. TrEMBL
Match: A9P9F0_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 9.8e-39
Identity = 96/158 (60.76%), Postives = 117/158 (74.05%), Query Frame = 1


Query: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRT 60
           M IS+ TLSF    PK PP L   FSSS+S FF    T +FF     +++SL+ L   R+
Sbjct: 1   MEISSITLSF----PKPPPCLP--FSSSQSTFFN---TTAFFNKSSKSYNSLV-LGKTRS 60

Query: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
            ++   KGLTCNALFGLGVPELVVIAGVA L+FGPK+LPEVG+SIGKTVKSFQQAAKEFE
Sbjct: 61  RSQRAKKGLTCNALFGLGVPELVVIAGVATLLFGPKQLPEVGRSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV 159
           SELKKEP+ T +T  E+PT+   EK+ D +VS+ KE+V
Sbjct: 121 SELKKEPDSTSDTPGEQPTTISEEKKHDSEVSSSKESV 148

[Close]

BLAST of MELO3C015378 vs. TrEMBL
Match: A0A067JIF5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23495 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 6.3e-38
Identity = 96/158 (60.76%), Postives = 114/158 (72.15%), Query Frame = 1


Query: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRT 60
           M IS+ TLS +       P L+  FSSS S FF +   V+F     ++ +S L L   R 
Sbjct: 1   MEISSITLSLSR------PPLALPFSSSHSTFFNS---VTFLNTTKNSGNSALVLGKTRR 60

Query: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           T +T  KGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TQRTA-KGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV 159
           SELKKEP+   ++  EKPT    EK+QD+++S+ KE+V
Sbjct: 121 SELKKEPDSLSDSPGEKPTGVSEEKKQDVEISSTKESV 148

[Close]

BLAST of MELO3C015378 vs. TrEMBL
Match: A0A0B0MTA3_GOSAR (Sec-independent translocase protein TatA OS=Gossypium arboreum GN=F383_29306 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.4e-37
Identity = 92/154 (59.74%), Postives = 110/154 (71.43%), Query Frame = 1


Query: 9   SFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFR----TTTKT 68
           S T S+ + P + S  FSSS+S FF+  +T+S F N   +H+  +     R    TT + 
Sbjct: 5   SITLSLARPPVAPSLPFSSSQSNFFSTGSTISLF-NKAKSHTKSVSFVVGRPRRGTTAEP 64

Query: 69  THKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELK 128
             KGLTCNALFGLGVPELVVIAGVAAL+FGPKKLPEVGKSIGKTVKSFQQAAKEFE+ELK
Sbjct: 65  AKKGLTCNALFGLGVPELVVIAGVAALLFGPKKLPEVGKSIGKTVKSFQQAAKEFETELK 124

Query: 129 KEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV 159
           KEPE   E   E  T+   EK+ DL+VS+ KE+V
Sbjct: 125 KEPESMTEQPKENTTAVSEEKKPDLEVSSSKESV 157

[Close]

BLAST of MELO3C015378 vs. TAIR10
Match: AT5G28750.1 (AT5G28750.1 Bacterial sec-independent translocation protein mttA/Hcf106)

HSP 1 Score: 141.0 bits (354), Expect = 6.5e-34
Identity = 81/141 (57.45%), Postives = 94/141 (66.67%), Query Frame = 1


Query: 18  PPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRTTTKTTHKGLTCNALFGL 77
           PP   P  SSS+S+FF+N  TV+   N     +  L     R   + T K LTCNALFGL
Sbjct: 12  PPVSLPLLSSSRSSFFSNCFTVTTRPN-----TRSLVAIGRRIRQEPTRKPLTCNALFGL 71

Query: 78  GVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPEPTEETSVEK 137
           GVPEL VIAGVAAL+FGPKKLPE+GKSIGKTVKSFQQAAKEFESELK EPE +   S + 
Sbjct: 72  GVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFESELKTEPEESVAESSQV 131

Query: 138 PTSTEAEKRQDLKVSNQKETV 159
            TS + E+++    S+ KE V
Sbjct: 132 ATSNKEEEKKTEVSSSSKENV 147

[Close]

BLAST of MELO3C015378 vs. TAIR10
Match: AT5G52440.1 (AT5G52440.1 Bacterial sec-independent translocation protein mttA/Hcf106)

HSP 1 Score: 57.8 bits (138), Expect = 7.2e-09
Identity = 44/145 (30.34%), Postives = 70/145 (48.28%), Query Frame = 1


Query: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVS--FFTNGDHNHSSLLRLT-- 60
           M ++   ++ +SS P +  S   S+   +S + A+   +S  F   G    S  + L   
Sbjct: 1   MAMALQIIASSSSSPTITKSHLFSYPPLQSRYKASKPNLSSWFSLLGSSRFSPYIGLKHL 60

Query: 61  --SFRTTTKTTHKGLTCNA------LFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKT 120
             S    +    K   C +      LFG+G PE +VI  VA LVFGPK L EV +++GKT
Sbjct: 61  GISISPKSSNPEKKRRCKSMMIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKT 120

Query: 121 VKSF-------QQAAKEFESELKKE 127
           +++F       Q  +++F+S L++E
Sbjct: 121 LRTFQPTIRELQDVSRDFKSTLERE 145

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BLAST of MELO3C015378 vs. NCBI nr
Match: gi|659099721|ref|XP_008450744.1| (PREDICTED: sec-independent protein translocase protein TATA, chloroplastic [Cucumis melo])

HSP 1 Score: 309.3 bits (791), Expect = 3.9e-81
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1


Query: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRT 60
           MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRT
Sbjct: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRT 60

Query: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV 159
           SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV
Sbjct: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV 158

[Close]

BLAST of MELO3C015378 vs. NCBI nr
Match: gi|449435744|ref|XP_004135654.1| (PREDICTED: sec-independent protein translocase protein TATA, chloroplastic [Cucumis sativus])

HSP 1 Score: 300.1 bits (767), Expect = 2.4e-78
Identity = 153/158 (96.84%), Postives = 155/158 (98.10%), Query Frame = 1


Query: 1   MVISTPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRT 60
           MVIS+PTLSFTSSIPKLPPSLSPSFSSSKSAFFANNAT SFFT GDHNHSSLLRLTSFRT
Sbjct: 1   MVISSPTLSFTSSIPKLPPSLSPSFSSSKSAFFANNATTSFFTYGDHNHSSLLRLTSFRT 60

Query: 61  TTKTTHKGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120
           TTKTTHKG TCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE
Sbjct: 61  TTKTTHKGFTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE 120

Query: 121 SELKKEPEPTEETSVEKPTSTEAEKRQDLKVSNQKETV 159
           SELKKEPEPTEETSVEKPTSTEAE+RQDLKVSNQKETV
Sbjct: 121 SELKKEPEPTEETSVEKPTSTEAEERQDLKVSNQKETV 158

[Close]

BLAST of MELO3C015378 vs. NCBI nr
Match: gi|595830495|ref|XP_007206084.1| (hypothetical protein PRUPE_ppa012899mg [Prunus persica])

HSP 1 Score: 172.2 bits (435), Expect = 7.4e-40
Identity = 98/150 (65.33%), Postives = 112/150 (74.67%), Query Frame = 1


Query: 9   SFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRTTTKTTH-- 68
           SFT S P+ P SL   FSSS+S F  NNAT S F N +  +S  L L   RT T+T    
Sbjct: 5   SFTLSTPRSPLSLP--FSSSQSTFLTNNATTSLFPNKNKVNSGALVLGRTRTRTRTERVK 64

Query: 69  KGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE 128
           KGLTCNALFGLG+PELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE+ELKKE
Sbjct: 65  KGLTCNALFGLGMPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFETELKKE 124

Query: 129 PEPTEETSVEKPTSTEAEKRQDLKVSNQKE 157
           PE   ET    PT+   E++Q++KVS+ +E
Sbjct: 125 PEALTET----PTAVSEEEKQEVKVSSSQE 148

[Close]

BLAST of MELO3C015378 vs. NCBI nr
Match: gi|645222656|ref|XP_008218264.1| (PREDICTED: sec-independent protein translocase protein TATA, chloroplastic [Prunus mume])

HSP 1 Score: 171.0 bits (432), Expect = 1.7e-39
Identity = 97/150 (64.67%), Postives = 111/150 (74.00%), Query Frame = 1


Query: 9   SFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRTTTKTTH-- 68
           SFT S  + PPSL   FSSS+S F +NN T   F N +  +S  L L   RT T+T    
Sbjct: 5   SFTLSTQRSPPSLP--FSSSQSTFLSNNVTTFLFPNKNKVNSGALVLGRTRTRTRTERFK 64

Query: 69  KGLTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKE 128
           KGLTCNALFGLG+PELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFE+ELKKE
Sbjct: 65  KGLTCNALFGLGMPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFETELKKE 124

Query: 129 PEPTEETSVEKPTSTEAEKRQDLKVSNQKE 157
           PE   ET    PT+   E++Q++KVS+ KE
Sbjct: 125 PEALTET----PTAVSEEEKQEVKVSSSKE 148

[Close]

BLAST of MELO3C015378 vs. NCBI nr
Match: gi|1009117521|ref|XP_015875362.1| (PREDICTED: sec-independent protein translocase protein TATA, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-38
Identity = 94/150 (62.67%), Postives = 113/150 (75.33%), Query Frame = 1


Query: 9   SFTSSIPKLPPSLSPSFSSSKSAFFANNATVSFFTNGDHNHSSLLRLTSFRTTTKTTHKG 68
           S T SIP+ PP L    SSS+S+F  NN T +   N +   +   ++ + R  T+   KG
Sbjct: 5   SITLSIPRPPPYLP--LSSSQSSFLTNNVTCTSLLNRNKAINGAFQIRT-RPRTQRAKKG 64

Query: 69  LTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPE 128
           LTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEP+
Sbjct: 65  LTCNALFGLGVPELVVIAGVAALVFGPKKLPEVGKSIGKTVKSFQQAAKEFESELKKEPD 124

Query: 129 PTEETSVEKPTSTEAEKRQDLKVSNQKETV 159
            + E  V+KPT+   E++QD+KVS+ KE+V
Sbjct: 125 -SIEPPVDKPTAVSEEEKQDVKVSSSKESV 150

The following BLAST results are available for this feature:

BLAST of MELO3C015378 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TATA_PEA	6.1e-34	60.53	Sec-independent protein translocase protein TATA, chloroplastic OS=Pisum sativum...	[more]
TATA_ARATH	1.1e-32	57.45	Sec-independent protein translocase protein TATA, chloroplastic OS=Arabidopsis t...	[more]
TATA_MAIZE	3.4e-24	64.44	Sec-independent protein translocase protein TATA, chloroplastic OS=Zea mays GN=T...	[more]
TATA_ORYSJ	2.2e-23	62.77	Sec-independent protein translocase protein TATA, chloroplastic OS=Oryza sativa ...	[more]
TATA_SYNP6	1.3e-15	46.51	Sec-independent protein translocase protein TatA OS=Synechococcus sp. (strain AT...	[more]

BLAST of MELO3C015378 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWL1_CUCSA	1.6e-78	96.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G573670 PE=3 SV=1	[more]
M5WDC7_PRUPE	5.2e-40	65.33	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012899mg PE=3 SV=1	[more]
A9P9F0_POPTR	9.8e-39	60.76	Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1	[more]
A0A067JIF5_JATCU	6.3e-38	60.76	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23495 PE=3 SV=1	[more]
A0A0B0MTA3_GOSAR	1.4e-37	59.74	Sec-independent translocase protein TatA OS=Gossypium arboreum GN=F383_29306 PE=...	[more]

BLAST of MELO3C015378 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G28750.1	6.5e-34	57.45	Bacterial sec-independent translocation protein mttA/Hcf106	[more]
AT5G52440.1	7.2e-09	30.34	Bacterial sec-independent translocation protein mttA/Hcf106	[more]

BLAST of MELO3C015378 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659099721\|ref\|XP_008450744.1\|	3.9e-81	100.00	PREDICTED: sec-independent protein translocase protein TATA, chloroplastic [Cucu...	[more]
gi\|449435744\|ref\|XP_004135654.1\|	2.4e-78	96.84	PREDICTED: sec-independent protein translocase protein TATA, chloroplastic [Cucu...	[more]
gi\|595830495\|ref\|XP_007206084.1\|	7.4e-40	65.33	hypothetical protein PRUPE_ppa012899mg [Prunus persica]	[more]
gi\|645222656\|ref\|XP_008218264.1\|	1.7e-39	64.67	PREDICTED: sec-independent protein translocase protein TATA, chloroplastic [Prun...	[more]
gi\|1009117521\|ref\|XP_015875362.1\|	1.1e-38	62.67	PREDICTED: sec-independent protein translocase protein TATA, chloroplastic [Zizi...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR003369	TatA/B/E
IPR003998	TatB-like
IPR006312	TatA/E

Vocabulary: **Molecular Function**
Term	Definition
GO:0008565	protein transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0015031	protein transport
GO:0009306	protein secretion

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0005886	plasma membrane
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0009306	protein secretion
biological_process	GO:0045038	protein import into chloroplast thylakoid membrane
biological_process	GO:0043953	protein transport by the Tat complex
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033281	TAT protein transport complex
cellular_component	GO:0016020	membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0031361	integral component of thylakoid membrane
molecular_function	GO:0008565	protein transporter activity
molecular_function	GO:0009977	proton motive force dependent protein transmembrane transporter activity

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU54162	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C015378T1	MELO3C015378T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU54162	MU54162	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003369	Sec-independent protein translocase protein TatA/B/E	PFAM	PF02416	MttA_Hcf106	coord: 77..126 score: 9.9
IPR003998	Twin-arginine translocation protein TatB-like	PRINTS	PR01506	TATBPROTEIN	coord: 74..94 score: 2.0E-7coord: 94..113 score: 2.0E-7coord: 113..131 score: 2.
IPR006312	Sec-independent protein translocase protein TatA/E	HAMAP	MF_00236	TatA_E	coord: 74..157 score: 1
IPR006312	Sec-independent protein translocase protein TatA/E	TIGRFAMs	TIGR01411	TIGR01411	coord: 76..122 score: 5.0
None	No IPR available	PANTHER	PTHR33162	FAMILY NOT NAMED	coord: 1..158 score: 1.5
None	No IPR available	PANTHER	PTHR33162:SF1	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC	coord: 1..158 score: 1.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C015378	Csa1G573670	Cucumber (Chinese Long) v2	cumeB041
MELO3C015378	Cla011293	Watermelon (97103) v1	mewmB271
MELO3C015378	ClCG03G016400	Watermelon (Charleston Gray)	mewcgB245
MELO3C015378	CSPI01G27260	Wild cucumber (PI 183967)	cpimeB042
MELO3C015378	Cucsa.289100	Cucumber (Gy14) v1	cgymeB481
MELO3C015378	CmaCh11G009890	Cucurbita maxima (Rimu)	cmameB115
MELO3C015378	CmoCh11G010070	Cucurbita moschata (Rifu)	cmomeB107
MELO3C015378	Lsi06G001900	Bottle gourd (USVL1VR-Ls)	lsimeB396
MELO3C015378	Cp4.1LG04g01840	Cucurbita pepo (Zucchini)	cpemeB619
MELO3C015378	CsGy1G026470	Cucumber (Gy14) v2	cgybmeB038
MELO3C015378	Carg16487	Silver-seed gourd	carmeB0897
MELO3C015378	CsaV3_1G039570	Cucumber (Chinese Long) v3	cucmeB042

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C015378	Watermelon (97103) v2	mewmbB249
MELO3C015378	Cucurbita moschata (Rifu)	cmomeB066
MELO3C015378	Cucurbita pepo (Zucchini)	cpemeB085
MELO3C015378	Cucurbita pepo (Zucchini)	cpemeB333