MELO3C014917 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C014917
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Isoflavone reductase
Location	chr6 : 22796360 .. 22796827 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTGTGGCATCTCAAGGTTTGACCCTAAGGAGGTAGTCGAAGCAACGGCCAACAATTCCAATCACAAGTCCTCTTATTCAACCTCCAATTGCTTCACCGGTGAATCCAAGCCTTTGGTTCACCAAGGACGTCTCCCCCCACCCGAGCCTCGCCATTCTTCTCCTGATCGAGCTGCACCTGGAGATCAAAAGATGACCATGAAGATAAAGACAAATGTTATGCGAGAAGAAGTGAAAGGGATCGATAATAAAGACCCAAGGATGAGGATGAGGACAAAGACCCGAACTTCAATGCAATTTGATAAAGATGAGAATTTTGGTGATGACAATATTGATGAAAATGATCAAAATTGTCGTGAGATTTGTCGAGGAGGATCACCGAGTTTTAGAGAATATTGTGTTGGCTCTGAATCAAGATCAAGAATGGGAAGCGAAGGTAGAGATGGATCGATTTCAAACTTTTAA

mRNA sequence

ATGGGTTGTGGCATCTCAAGGTTTGACCCTAAGGAGGTAGTCGAAGCAACGGCCAACAATTCCAATCACAAGTCCTCTTATTCAACCTCCAATTGCTTCACCGGTGAATCCAAGCCTTTGGTTCACCAAGGACGTCTCCCCCCACCCGAGCCTCGCCATTCTTCTCCTGATCGAGCTGCACCTGGAGATCAAAAGATGACCATGAAGATAAAGACAAATGTTATGCGAGAAGAAGTGAAAGGGATCGATAATAAAGACCCAAGGATGAGGATGAGGACAAAGACCCGAACTTCAATGCAATTTGATAAAGATGAGAATTTTGGTGATGACAATATTGATGAAAATGATCAAAATTGTCGTGAGATTTGTCGAGGAGGATCACCGAGTTTTAGAGAATATTGTGTTGGCTCTGAATCAAGATCAAGAATGGGAAGCGAAGGTAGAGATGGATCGATTTCAAACTTTTAA

Coding sequence (CDS)

ATGGGTTGTGGCATCTCAAGGTTTGACCCTAAGGAGGTAGTCGAAGCAACGGCCAACAATTCCAATCACAAGTCCTCTTATTCAACCTCCAATTGCTTCACCGGTGAATCCAAGCCTTTGGTTCACCAAGGACGTCTCCCCCCACCCGAGCCTCGCCATTCTTCTCCTGATCGAGCTGCACCTGGAGATCAAAAGATGACCATGAAGATAAAGACAAATGTTATGCGAGAAGAAGTGAAAGGGATCGATAATAAAGACCCAAGGATGAGGATGAGGACAAAGACCCGAACTTCAATGCAATTTGATAAAGATGAGAATTTTGGTGATGACAATATTGATGAAAATGATCAAAATTGTCGTGAGATTTGTCGAGGAGGATCACCGAGTTTTAGAGAATATTGTGTTGGCTCTGAATCAAGATCAAGAATGGGAAGCGAAGGTAGAGATGGATCGATTTCAAACTTTTAA

Protein sequence

MGCGISRFDPKEVVEATANNSNHKSSYSTSNCFTGESKPLVHQGRLPPPEPRHSSPDRAAPGDQKMTMKIKTNVMREEVKGIDNKDPRMRMRTKTRTSMQFDKDENFGDDNIDENDQNCREICRGGSPSFREYCVGSESRSRMGSEGRDGSISNF*

Homology

[Close]

BLAST of MELO3C014917 vs. TrEMBL
Match: A0A0A0L883_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G560250 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 8.9e-53
Identity = 114/158 (72.15%), Postives = 126/158 (79.75%), Query Frame = 1


Query: 1   MGCGISRFDPKEVVEATANNSNHKS--------SYSTSNCFTGESKPLVHQGRLPPPEPR 60
           MGCGISRFDPKEVVEATAN+SNH          SYSTSNCFTGESK + HQGR PPPEPR
Sbjct: 1   MGCGISRFDPKEVVEATANDSNHNDTPNHSNHKSYSTSNCFTGESKHMSHQGRPPPPEPR 60

Query: 61  HSSPDRAAPGDQKMTMKIKTNVMREEVKGIDNK--DPRMRMRTKTRTSMQFDK-DENFGD 120
           HSS DRAAPGDQKM MK+KTNV +EE +GI+      RMRMRT+TRTS Q D  D++  D
Sbjct: 61  HSSSDRAAPGDQKM-MKMKTNVKQEESRGINTNGLKIRMRMRTRTRTSTQIDNDDDDSSD 120

Query: 121 DNIDENDQNCREICRGGSPSFREYCVGSESRSR-MGSE 147
           ++ D+NDQNCREICRGGSPSFREYCV SESRSR MGSE
Sbjct: 121 EDSDKNDQNCREICRGGSPSFREYCVDSESRSRSMGSE 157

[Close]

BLAST of MELO3C014917 vs. NCBI nr
Match: gi|659098449|ref|XP_008450143.1| (PREDICTED: uncharacterized protein LOC103491818 [Cucumis melo])

HSP 1 Score: 307.8 bits (787), Expect = 1.1e-80
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 1


Query: 1   MGCGISRFDPKEVVEATANNSNHKSSYSTSNCFTGESKPLVHQGRLPPPEPRHSSPDRAA 60
           MGCGISRFDPKEVVEATANNSNHKSSYSTSNCFTGESKPLVHQGRLPPPEPRHSSPDRAA
Sbjct: 1   MGCGISRFDPKEVVEATANNSNHKSSYSTSNCFTGESKPLVHQGRLPPPEPRHSSPDRAA 60

Query: 61  PGDQKMTMKIKTNVMREEVKGIDNKDPRMRMRTKTRTSMQFDKDENFGDDNIDENDQNCR 120
           PGDQKMTMKIKTNVMREEVKGIDNKDPRMRMRTKTRTSMQFDKDENFGDDNIDENDQNCR
Sbjct: 61  PGDQKMTMKIKTNVMREEVKGIDNKDPRMRMRTKTRTSMQFDKDENFGDDNIDENDQNCR 120

Query: 121 EICRGGSPSFREYCVGSESRSRMGSE 147
           EICRGGSPSFREYCVGSESRSRMGSE
Sbjct: 121 EICRGGSPSFREYCVGSESRSRMGSE 146

[Close]

BLAST of MELO3C014917 vs. NCBI nr
Match: gi|778681591|ref|XP_011651546.1| (PREDICTED: uncharacterized protein LOC105434913 [Cucumis sativus])

HSP 1 Score: 214.5 bits (545), Expect = 1.3e-52
Identity = 114/158 (72.15%), Postives = 126/158 (79.75%), Query Frame = 1


Query: 1   MGCGISRFDPKEVVEATANNSNHKS--------SYSTSNCFTGESKPLVHQGRLPPPEPR 60
           MGCGISRFDPKEVVEATAN+SNH          SYSTSNCFTGESK + HQGR PPPEPR
Sbjct: 1   MGCGISRFDPKEVVEATANDSNHNDTPNHSNHKSYSTSNCFTGESKHMSHQGRPPPPEPR 60

Query: 61  HSSPDRAAPGDQKMTMKIKTNVMREEVKGIDNK--DPRMRMRTKTRTSMQFDK-DENFGD 120
           HSS DRAAPGDQKM MK+KTNV +EE +GI+      RMRMRT+TRTS Q D  D++  D
Sbjct: 61  HSSSDRAAPGDQKM-MKMKTNVKQEESRGINTNGLKIRMRMRTRTRTSTQIDNDDDDSSD 120

Query: 121 DNIDENDQNCREICRGGSPSFREYCVGSESRSR-MGSE 147
           ++ D+NDQNCREICRGGSPSFREYCV SESRSR MGSE
Sbjct: 121 EDSDKNDQNCREICRGGSPSFREYCVDSESRSRSMGSE 157

The following BLAST results are available for this feature:

BLAST of MELO3C014917 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L883_CUCSA	8.9e-53	72.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G560250 PE=4 SV=1	[more]

BLAST of MELO3C014917 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659098449\|ref\|XP_008450143.1\|	1.1e-80	100.00	PREDICTED: uncharacterized protein LOC103491818 [Cucumis melo]	[more]
gi\|778681591\|ref\|XP_011651546.1\|	1.3e-52	72.15	PREDICTED: uncharacterized protein LOC105434913 [Cucumis sativus]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C014917T1	MELO3C014917T1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C014917	Csa3G560250	Cucumber (Chinese Long) v2	cumeB245
MELO3C014917	CSPI03G25270	Wild cucumber (PI 183967)	cpimeB244
MELO3C014917	Lsi07G014990	Bottle gourd (USVL1VR-Ls)	lsimeB443
MELO3C014917	CsaV3_3G026770	Cucumber (Chinese Long) v3	cucmeB250

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C014917	Watermelon (97103) v2	mewmbB434
MELO3C014917	Watermelon (97103) v2	mewmbB438
MELO3C014917	Watermelon (97103) v2	mewmbB446
MELO3C014917	Watermelon (97103) v2	mewmbB450
MELO3C014917	Wax gourd	mewgoB525
MELO3C014917	Melon (DHL92) v3.5.1	memeB053
MELO3C014917	Melon (DHL92) v3.5.1	memeB112
MELO3C014917	Cucumber (Gy14) v1	cgymeB037
MELO3C014917	Cucumber (Gy14) v1	cgymeB565
MELO3C014917	Cucurbita maxima (Rimu)	cmameB137
MELO3C014917	Cucurbita maxima (Rimu)	cmameB237
MELO3C014917	Cucurbita maxima (Rimu)	cmameB345
MELO3C014917	Cucurbita moschata (Rifu)	cmomeB129
MELO3C014917	Cucurbita moschata (Rifu)	cmomeB225
MELO3C014917	Wild cucumber (PI 183967)	cpimeB079
MELO3C014917	Wild cucumber (PI 183967)	cpimeB503
MELO3C014917	Cucumber (Chinese Long) v2	cumeB078
MELO3C014917	Watermelon (Charleston Gray)	mewcgB427
MELO3C014917	Watermelon (Charleston Gray)	mewcgB437
MELO3C014917	Watermelon (Charleston Gray)	mewcgB439
MELO3C014917	Watermelon (Charleston Gray)	mewcgB444
MELO3C014917	Watermelon (97103) v1	mewmB485
MELO3C014917	Watermelon (97103) v1	mewmB462
MELO3C014917	Watermelon (97103) v1	mewmB465
MELO3C014917	Watermelon (97103) v1	mewmB487
MELO3C014917	Cucurbita pepo (Zucchini)	cpemeB582
MELO3C014917	Cucurbita pepo (Zucchini)	cpemeB640
MELO3C014917	Bottle gourd (USVL1VR-Ls)	lsimeB032
MELO3C014917	Cucumber (Gy14) v2	cgybmeB213
MELO3C014917	Cucumber (Gy14) v2	cgybmeB441
MELO3C014917	Silver-seed gourd	carmeB0373
MELO3C014917	Silver-seed gourd	carmeB0444
MELO3C014917	Cucumber (Chinese Long) v3	cucmeB084
MELO3C014917	Cucumber (Chinese Long) v3	cucmeB513