MELO3C014263 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C014263
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionPutative mediator of RNA polymerase II transcription subunit 4
Locationchr5 : 4725173 .. 4727029 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATTTTTGTTCTCGGGTTGGAAATCCACTATGAGATGAGAGAGGAAGAATAACGCGCGGCTGTTTGAGGTGGACGCCGAATCTGCGAGAGAAATTTTGGGTATCCGTTCAGCGGCAGTGCGCCGGTGGTGTGGCTACGGTTCAGTGGCTAAATCGATGTCGGTAACTGTTTTCCTTTGAGAATTTTCAGTGCGTATTTCATAGTTTTGAAGGTTTATAATTGATTGGGAGGTTTTTGTTTCCATTATAACTCTGTATGATTACACTAGATATCTTGGTGTTCTTACTCTCTAGATTGAATTCTGTTTTGGGCATATTAGAGTTTAGTTGTTTGCTCTCTATTTGTGTATGAACCCTAATACAATTCGTTGAAGTACACAAAAATATGCTTCAGCATCAAATTGTTCAATCCCCAGCTAGATTGGGGTTGACAAATCCCAATTCTCCCTCTATTCAAAACCCTACTCCACCTAAATTGCCCCCTTCTCAACAATCCCATCACCAAAATCAATCCAATGTCTCTTCTTCCACCCCTTCCTCCACTCTCCTTCCCCTACTTCCTCCTCTTCCTCGAGCTCAAGCACTTCTCCTTCAAATGGCTTCATTAGCTTCCAAGCTCTTTGAAGTCTCCCCCAATCGCTCCCTTTGGCTCACTGCATTTCGAGGGTCTCTTCCCACTTTTCTTACTTCTCAAACCCAGTCCTCACCCTCTACCTTTCTTGATTCTACTCCGTCCTCTTCGAAAGAAATTTTGTCGCTCTTTAATGTCCTGCAGACCCAGTTGTTTGAAGCTGTTGCCGAGCTTCAGGAGATTCTTGATCTTCAAGACTCTAAGCAGAAGATTGCTTATGAGATACGAGCTAAAGATGCTGCTCTTCGTGCTTTTGCTAATAAGCTTAAGGATGCTGAGCAGGTACTTGATGTTTTGTTTGATGATTATGCGGATTATCAGCGTCCTCGACGGGTTAAGACAGAGGGTGGTGCTGAAAATGAATCTTTGTGTTCGACCACAGTTGCATCCCAGTTGAGATTATCTGATATATTGTCGTATGCTCATAGGATAAGCTATACTACTTTTGCACCACCTGAATTTGGTGCTGGACAAGCTCCATTACGTGGAGCACTTCCCCCTGCTCCGCAAGACGAGCAAATGCGTGCGTCTCAGTTGTATAATTTTGCAAACCTTGATGTTGGTTTGCCTAAAGCAGTTGAAAGCACTGAGAAAACTATTGAGCCGATGATTGAGCCTCCAGCTCCGGTGCGAGTAGATGCTAATCCTCTTTCTAATATGGCTGCTATTCAGGGTCTGCTTCCTCCAAATATTACTGTCCCATCTGGCTGGAAACCTGGAATGCCTGTCGAGTTACCTGGAGATTTACCAATGCCCCCTCCTGGATGGAAGCCTGGGGACCCTGTGCGATTACCACCAATGGACTCTCTTCCTGTTACTAGAGTTGATGAGCCACAATTGAGGCCTAATGCTCTTCCAGGATTGCATAAACCTCCTGAGCCAATTCAAGTTAGGCATGTTCAATTGGATATTCTTGATCAAGATGACGATAGTAGTGATTACACTAGCGATGAAGGAAGCTCTGAAGATGATGATTGAGTGGAACTTGGACTGAATCATCAACTAATGTCATAAATGTCCCCTTGTTGACAAGAGATGGGTGTAGAGACAATCAAAAGGTTTGCCTAGAAGCAGCAACCCTTAAAGAGTGTATACTATAGTTTACTGATGACTGCATGGGGCTAAGCAGCAATCTGCAGGGGGAAGGTTACATTTCATACTTTCAAACTTACATGTTATTGATGATGTGTTTTGCATTCCCAAGGTGAACTTGAATCACACAAATC

mRNA sequence

ATATTTTTGTTCTCGGGTTGGAAATCCACTATGAGATGAGAGAGGAAGAATAACGCGCGGCTGTTTGAGGTGGACGCCGAATCTGCGAGAGAAATTTTGGGTATCCGTTCAGCGGCAGTGCGCCGGTGGTGTGGCTACGGTTCAGTGGCTAAATCGATGTCGGTAACTGTTTTCCTTTGAGAATTTTCAGTGCGTATTTCATAGTTTTGAAGGTTTATAATTGATTGGGAGGTTTTTGTTTCCATTATAACTCTGTATGATTACACTAGATATCTTGGTGTTCTTACTCTCTAGATTGAATTCTGTTTTGGGCATATTAGAGTTTAGTTGTTTGCTCTCTATTTGTGTATGAACCCTAATACAATTCGTTGAAGTACACAAAAATATGCTTCAGCATCAAATTGTTCAATCCCCAGCTAGATTGGGGTTGACAAATCCCAATTCTCCCTCTATTCAAAACCCTACTCCACCTAAATTGCCCCCTTCTCAACAATCCCATCACCAAAATCAATCCAATGTCTCTTCTTCCACCCCTTCCTCCACTCTCCTTCCCCTACTTCCTCCTCTTCCTCGAGCTCAAGCACTTCTCCTTCAAATGGCTTCATTAGCTTCCAAGCTCTTTGAAGTCTCCCCCAATCGCTCCCTTTGGCTCACTGCATTTCGAGGGTCTCTTCCCACTTTTCTTACTTCTCAAACCCAGTCCTCACCCTCTACCTTTCTTGATTCTACTCCGTCCTCTTCGAAAGAAATTTTGTCGCTCTTTAATGTCCTGCAGACCCAGTTGTTTGAAGCTGTTGCCGAGCTTCAGGAGATTCTTGATCTTCAAGACTCTAAGCAGAAGATTGCTTATGAGATACGAGCTAAAGATGCTGCTCTTCGTGCTTTTGCTAATAAGCTTAAGGATGCTGAGCAGGTACTTGATGTTTTGTTTGATGATTATGCGGATTATCAGCGTCCTCGACGGGTTAAGACAGAGGGTGGTGCTGAAAATGAATCTTTGTGTTCGACCACAGTTGCATCCCAGTTGAGATTATCTGATATATTGTCGTATGCTCATAGGATAAGCTATACTACTTTTGCACCACCTGAATTTGGTGCTGGACAAGCTCCATTACGTGGAGCACTTCCCCCTGCTCCGCAAGACGAGCAAATGCGTGCGTCTCAGTTGTATAATTTTGCAAACCTTGATGTTGGTTTGCCTAAAGCAGTTGAAAGCACTGAGAAAACTATTGAGCCGATGATTGAGCCTCCAGCTCCGGTGCGAGTAGATGCTAATCCTCTTTCTAATATGGCTGCTATTCAGGGTCTGCTTCCTCCAAATATTACTGTCCCATCTGGCTGGAAACCTGGAATGCCTGTCGAGTTACCTGGAGATTTACCAATGCCCCCTCCTGGATGGAAGCCTGGGGACCCTGTGCGATTACCACCAATGGACTCTCTTCCTGTTACTAGAGTTGATGAGCCACAATTGAGGCCTAATGCTCTTCCAGGATTGCATAAACCTCCTGAGCCAATTCAAGTTAGGCATGTTCAATTGGATATTCTTGATCAAGATGACGATAGTAGTGATTACACTAGCGATGAAGGAAGCTCTGAAGATGATGATTGAGTGGAACTTGGACTGAATCATCAACTAATGTCATAAATGTCCCCTTGTTGACAAGAGATGGGTGTAGAGACAATCAAAAGGTTTGCCTAGAAGCAGCAACCCTTAAAGAGTGTATACTATAGTTTACTGATGACTGCATGGGGCTAAGCAGCAATCTGCAGGGGGAAGGTTACATTTCATACTTTCAAACTTACATGTTATTGATGATGTGTTTTGCATTCCCAAGGTGAACTTGAATCACACAAATC

Coding sequence (CDS)

ATGCTTCAGCATCAAATTGTTCAATCCCCAGCTAGATTGGGGTTGACAAATCCCAATTCTCCCTCTATTCAAAACCCTACTCCACCTAAATTGCCCCCTTCTCAACAATCCCATCACCAAAATCAATCCAATGTCTCTTCTTCCACCCCTTCCTCCACTCTCCTTCCCCTACTTCCTCCTCTTCCTCGAGCTCAAGCACTTCTCCTTCAAATGGCTTCATTAGCTTCCAAGCTCTTTGAAGTCTCCCCCAATCGCTCCCTTTGGCTCACTGCATTTCGAGGGTCTCTTCCCACTTTTCTTACTTCTCAAACCCAGTCCTCACCCTCTACCTTTCTTGATTCTACTCCGTCCTCTTCGAAAGAAATTTTGTCGCTCTTTAATGTCCTGCAGACCCAGTTGTTTGAAGCTGTTGCCGAGCTTCAGGAGATTCTTGATCTTCAAGACTCTAAGCAGAAGATTGCTTATGAGATACGAGCTAAAGATGCTGCTCTTCGTGCTTTTGCTAATAAGCTTAAGGATGCTGAGCAGGTACTTGATGTTTTGTTTGATGATTATGCGGATTATCAGCGTCCTCGACGGGTTAAGACAGAGGGTGGTGCTGAAAATGAATCTTTGTGTTCGACCACAGTTGCATCCCAGTTGAGATTATCTGATATATTGTCGTATGCTCATAGGATAAGCTATACTACTTTTGCACCACCTGAATTTGGTGCTGGACAAGCTCCATTACGTGGAGCACTTCCCCCTGCTCCGCAAGACGAGCAAATGCGTGCGTCTCAGTTGTATAATTTTGCAAACCTTGATGTTGGTTTGCCTAAAGCAGTTGAAAGCACTGAGAAAACTATTGAGCCGATGATTGAGCCTCCAGCTCCGGTGCGAGTAGATGCTAATCCTCTTTCTAATATGGCTGCTATTCAGGGTCTGCTTCCTCCAAATATTACTGTCCCATCTGGCTGGAAACCTGGAATGCCTGTCGAGTTACCTGGAGATTTACCAATGCCCCCTCCTGGATGGAAGCCTGGGGACCCTGTGCGATTACCACCAATGGACTCTCTTCCTGTTACTAGAGTTGATGAGCCACAATTGAGGCCTAATGCTCTTCCAGGATTGCATAAACCTCCTGAGCCAATTCAAGTTAGGCATGTTCAATTGGATATTCTTGATCAAGATGACGATAGTAGTGATTACACTAGCGATGAAGGAAGCTCTGAAGATGATGATTGA

Protein sequence

MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNVSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTFLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGAENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRVDANPLSNMAAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD*
Homology
[Close]
BLAST of MELO3C014263 vs. Swiss-Prot
Match: MED4_ARATH (Mediator of RNA polymerase II transcription subunit 4 OS=Arabidopsis thaliana GN=MED4 PE=1 SV=1)

HSP 1 Score: 529.3 bits (1362), Expect = 3.8e-149
Identity = 278/434 (64.06%), Postives = 333/434 (76.73%), Query Frame = 1 

Query: 1   MLQHQIVQSPARLGLTNPNSPSIQNPTP-----PKLPPSQQSHHQ--------------- 60
           MLQHQIVQSPARLGLT P SPS+QNPTP     P    S QS HQ               
Sbjct: 1   MLQHQIVQSPARLGLTGPGSPSVQNPTPTRHGHPTSSSSSQSQHQQIQQQPNLLPSSTVA 60

Query: 61  --NQSNVSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPT 120
             + ++ S++  SS LL LLPPLPRAQALL QMA L SKLF+VSPNR++WL+AFRGSLP+
Sbjct: 61  AASSASASAAVSSSALLSLLPPLPRAQALLQQMAVLTSKLFDVSPNRAIWLSAFRGSLPS 120

Query: 121 FLTSQTQSSPSTFLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIR 180
           FL+S +   P    + +PSS+KEILS FN LQTQLFEAV ELQEILDLQD+KQK+A EI+
Sbjct: 121 FLSSHSLPPPPPLENPSPSSTKEILSQFNSLQTQLFEAVTELQEILDLQDAKQKVAREIK 180

Query: 181 AKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGAEN----ESLCSTTVASQL 240
           +KD++L AFANKLKDAE+VLD+L DDY+DY++P+R K E   E+     S  STTV+SQL
Sbjct: 181 SKDSSLLAFANKLKDAERVLDMLVDDYSDYRKPKRSKIEEDDEDNDNESSSSSTTVSSQL 240

Query: 241 RLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKA 300
           +L DIL+YAH+ISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLY FA+LD+GLPK 
Sbjct: 241 KLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYTFADLDIGLPKT 300

Query: 301 VESTEKTIEPMIEPPAPVRVDANPLSNMAAIQGLLPPNITVPSGWKPGMPVELPGDLPMP 360
           VE+ EK +E +IEPP P         +++AI  LLPPNI VPSGWKPGMPVELP DLP+P
Sbjct: 301 VENMEKKVEALIEPPPPPEA-----MDISAIHNLLPPNIAVPSGWKPGMPVELPRDLPLP 360

Query: 361 PPGWKPGDPVRLPPMDSLPVTRVDEPQ-LRPNALPGLHKPPEPIQVRHVQLDILDQDDDS 408
           PPGWKPGDPV LPP++S+   R ++ Q +RP+   GLH+PP+ IQVR VQLDIL +DDDS
Sbjct: 361 PPGWKPGDPVVLPPLESIAAPRAEDHQHMRPS--QGLHRPPDVIQVRAVQLDIL-EDDDS 420

[Close]
BLAST of MELO3C014263 vs. TrEMBL
Match: A0A0A0KXB7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G292980 PE=4 SV=1)

HSP 1 Score: 790.0 bits (2039), Expect = 1.3e-225
Identity = 398/407 (97.79%), Postives = 400/407 (98.28%), Query Frame = 1 

Query: 1   MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNVSSSTPSSTLLPLLPP 60
           MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSN+SSSTPSSTLLPLLPP
Sbjct: 1   MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPP 60

Query: 61  LPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTFLDSTPSSSK 120
           LPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSPST LDSTPSSSK
Sbjct: 61  LPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTLLDSTPSSSK 120

Query: 121 EILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDV 180
           EILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLK+AEQVLDV
Sbjct: 121 EILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDV 180

Query: 181 LFDDYADYQRPRRVKTEGGAENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQ 240
           LFDDYADYQRPRR KTEG AENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQ
Sbjct: 181 LFDDYADYQRPRRDKTEGDAENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQ 240

Query: 241 APLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRVDANPLS 300
           APLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVR DANPL 
Sbjct: 241 APLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPL- 300

Query: 301 NMAAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEP 360
             AAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEP
Sbjct: 301 --AAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEP 360

Query: 361 QLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD 408
           QLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
Sbjct: 361 QLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD 404

[Close]
BLAST of MELO3C014263 vs. TrEMBL
Match: A0A061EZR1_THECC (Hydroxyproline-rich glycoprotein family protein OS=Theobroma cacao GN=TCM_022075 PE=4 SV=1)

HSP 1 Score: 625.5 bits (1612), Expect = 4.4e-176
Identity = 310/417 (74.34%), Postives = 360/417 (86.33%), Query Frame = 1 

Query: 1   MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLP--------PSQQSHHQNQSNVSSSTPSS 60
           MLQHQIVQSPARLGLTNPNSPS+QNPTPPK P        P QQ    + +N+S++T SS
Sbjct: 1   MLQHQIVQSPARLGLTNPNSPSLQNPTPPKYPSSQPQPQPPPQQQQQPSSTNLSATTTSS 60

Query: 61  TLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTFL 120
            LL LLPPLPRAQ+LLLQMASLASKLFEVSPNR++W++AFRGSLP+FL+SQ Q++P   L
Sbjct: 61  ALLSLLPPLPRAQSLLLQMASLASKLFEVSPNRTVWVSAFRGSLPSFLSSQIQTTPPPPL 120

Query: 121 DSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLK 180
           +STP+S+KE+LSLF  LQTQLFEAVA+LQEILDLQD KQKIA EIR+ D A+ AFANKLK
Sbjct: 121 ESTPTSTKEVLSLFTSLQTQLFEAVAQLQEILDLQDFKQKIAREIRSNDGAILAFANKLK 180

Query: 181 DAEQVLDVLFDDYADYQRPRRVKTE--GGAENESLCSTTVASQLRLSDILSYAHRISYTT 240
           +AE+VLD+L DDY+DY+RP+R+K E  GG  ++   +TTVASQL LSDILSYAHRISYTT
Sbjct: 181 EAERVLDMLVDDYSDYRRPKRLKLEEDGGGGDDDSSTTTVASQLNLSDILSYAHRISYTT 240

Query: 241 FAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPA 300
           FAPPEFGAGQAPLRGALPPAPQ+EQMRASQLY FA+LDVGLPKAVE+ EK +E +IEPP 
Sbjct: 241 FAPPEFGAGQAPLRGALPPAPQEEQMRASQLYAFADLDVGLPKAVEAKEKAVEAIIEPPP 300

Query: 301 PVRVDANPLSNMAAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMD 360
              VD NPL+N+AA+QGLLPPN TVPSGWKPGMPVELP +LP+PPPGWKPGDPV LPP+D
Sbjct: 301 AQPVDTNPLANLAALQGLLPPNFTVPSGWKPGMPVELPTNLPVPPPGWKPGDPVPLPPLD 360

Query: 361 SLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD 408
           SLP+ R++EP LRP   PGLHKPPEPIQVRHV+LDILD DDDSSDY+SDEGSS+D+D
Sbjct: 361 SLPIPRMEEPHLRPVPPPGLHKPPEPIQVRHVELDILDPDDDSSDYSSDEGSSDDED 417

[Close]
BLAST of MELO3C014263 vs. TrEMBL
Match: A0A067EL12_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g044000mg PE=4 SV=1)

HSP 1 Score: 601.3 bits (1549), Expect = 8.9e-169
Identity = 309/422 (73.22%), Postives = 351/422 (83.18%), Query Frame = 1 

Query: 1   MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLP---PSQQSHHQNQSNVSSSTP------- 60
           MLQHQIVQSPARLGLTNPNSPS+QNP P   P   P+  +HH  +S    + P       
Sbjct: 1   MLQHQIVQSPARLGLTNPNSPSLQNPNPNPSPTKFPTSATHHHLRSATPPTAPITTGTTA 60

Query: 61  --SSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSP 120
             SSTLL LLPPLPRAQALLLQMASLASKLFEVSPNRSLW++AFRGSLPTFL+SQ QS P
Sbjct: 61  CTSSTLLSLLPPLPRAQALLLQMASLASKLFEVSPNRSLWISAFRGSLPTFLSSQAQSQP 120

Query: 121 STFLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFA 180
              +DS+PS+ KEI++ F  LQTQLFEAVAELQEILDLQD+KQKIA EI+AKD+A+ AFA
Sbjct: 121 PPPIDSSPSTIKEIIACFTSLQTQLFEAVAELQEILDLQDAKQKIAREIKAKDSAILAFA 180

Query: 181 NKLKDAEQVLDVLFDDYADYQRPRRVKTEGGAENE---SLCSTTVASQLRLSDILSYAHR 240
           NK+K+AE+VLD+L DDY+DY+RP+RVK+EGG  N+     CSTTV S+L LSDILSYAHR
Sbjct: 181 NKIKEAERVLDILVDDYSDYRRPKRVKSEGGDGNDDDSGSCSTTVESRLNLSDILSYAHR 240

Query: 241 ISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPM 300
           ISYTTFAPPEFGAGQ PLRGALPPAPQ+EQMRASQLY FA+LDVGLPK VE+ EKTIE +
Sbjct: 241 ISYTTFAPPEFGAGQGPLRGALPPAPQEEQMRASQLYTFADLDVGLPKVVETKEKTIEAI 300

Query: 301 IEPPAPVRVDANPLSNMAAIQGLLPPNITVPSGWKPGMPVELPGDLPM-PPPGWKPGDPV 360
           IEPP    VDANPL ++A   GLLPPNITVPSGWKPGMPVELP D P+ PPPGWKPGD V
Sbjct: 301 IEPPPLQPVDANPLKDLA---GLLPPNITVPSGWKPGMPVELPKDFPLVPPPGWKPGDAV 360

Query: 361 RLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSE 407
            LPP+D+LP+ R++E QLRP    GLHKPPEPIQVRHV+LDILDQDDDSSDY+S+EGSSE
Sbjct: 361 PLPPLDALPMPRIEEQQLRPVPPQGLHKPPEPIQVRHVELDILDQDDDSSDYSSEEGSSE 419

[Close]
BLAST of MELO3C014263 vs. TrEMBL
Match: V4ST57_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011831mg PE=4 SV=1)

HSP 1 Score: 600.5 bits (1547), Expect = 1.5e-168
Identity = 309/422 (73.22%), Postives = 350/422 (82.94%), Query Frame = 1 

Query: 1   MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLP---PSQQSHHQNQSNVSSSTP------- 60
           MLQHQIVQSPARLGLTNPNSPS+QNP P   P   P+  +HH  +S    + P       
Sbjct: 1   MLQHQIVQSPARLGLTNPNSPSLQNPNPNPSPTKFPTSATHHHLRSATPPTAPITTGTTA 60

Query: 61  --SSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSP 120
             SSTLL LLPPLPRAQALLLQMASLASKLFEVSPNRSLW++AFRGSLPTFL+SQ QS P
Sbjct: 61  CTSSTLLSLLPPLPRAQALLLQMASLASKLFEVSPNRSLWISAFRGSLPTFLSSQAQSQP 120

Query: 121 STFLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFA 180
              +DS+PS+ KEI++ F  LQTQLFEAVAELQEILDLQD+KQKIA EI+AKD+A+ AFA
Sbjct: 121 PPPIDSSPSTIKEIIACFTSLQTQLFEAVAELQEILDLQDAKQKIAREIKAKDSAILAFA 180

Query: 181 NKLKDAEQVLDVLFDDYADYQRPRRVKTEGGAENE---SLCSTTVASQLRLSDILSYAHR 240
           NK+K+AE+VLD+L DDY+DY+RP+RVK+EG   N+     CSTTV SQL LSDILSYAHR
Sbjct: 181 NKIKEAERVLDILVDDYSDYRRPKRVKSEGADGNDDDSGSCSTTVESQLNLSDILSYAHR 240

Query: 241 ISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPM 300
           ISYTTFAPPEFGAGQ PLRGALPPAPQ+EQMRASQLY FA+LDVGLPK VE+ EKTIE +
Sbjct: 241 ISYTTFAPPEFGAGQGPLRGALPPAPQEEQMRASQLYTFADLDVGLPKVVETKEKTIEAI 300

Query: 301 IEPPAPVRVDANPLSNMAAIQGLLPPNITVPSGWKPGMPVELPGDLPM-PPPGWKPGDPV 360
           IEPP    VDANPL ++A   GLLPPNITVPSGWKPGMPVELP D P+ PPPGWKPGD V
Sbjct: 301 IEPPPLQPVDANPLKDLA---GLLPPNITVPSGWKPGMPVELPKDFPLVPPPGWKPGDAV 360

Query: 361 RLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSE 407
            LPP+D+LP+ R++E QLRP    GLHKPPEPIQVRHV+LDILDQDDDSSDY+S+EGSSE
Sbjct: 361 PLPPLDALPMPRIEEQQLRPVPPQGLHKPPEPIQVRHVELDILDQDDDSSDYSSEEGSSE 419

[Close]
BLAST of MELO3C014263 vs. TrEMBL
Match: W9RBW9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_013165 PE=4 SV=1)

HSP 1 Score: 593.2 bits (1528), Expect = 2.4e-166
Identity = 311/426 (73.00%), Postives = 350/426 (82.16%), Query Frame = 1 

Query: 1   MLQHQIVQSPARLGLTNPNSPSIQN--PTPPKLPPSQQSHHQNQSNVSSS---------- 60
           MLQHQIVQSPARLGLTNPNSPS+QN   TPPKLPPSQ S     S+ SSS          
Sbjct: 1   MLQHQIVQSPARLGLTNPNSPSLQNHPTTPPKLPPSQPSTILPSSSSSSSASASAATAAA 60

Query: 61  ----TPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQT 120
               T SS LL LLPPLPRAQ+LLLQMASLAS+LFEVSPNRSLW TAFRG+LPTFL+SQT
Sbjct: 61  ATTTTTSSALLSLLPPLPRAQSLLLQMASLASRLFEVSPNRSLWHTAFRGNLPTFLSSQT 120

Query: 121 QSSPSTFLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAAL 180
                  LDS+PSS+KEILSLF  LQTQLFE+VA+LQEILDLQD+K K+  EIR+KD+AL
Sbjct: 121 TQQS---LDSSPSSTKEILSLFTALQTQLFESVAQLQEILDLQDAKNKVVREIRSKDSAL 180

Query: 181 RAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGAENE---SLCSTTVASQLRLSDILS 240
            AF +K+K+AE+VLD+L DDY+DY+ P+R K +  A ++   +  STTVASQL LSDILS
Sbjct: 181 LAFGHKVKEAERVLDILVDDYSDYRHPKRSKLDDDAMDDDGGTSSSTTVASQLNLSDILS 240

Query: 241 YAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKT 300
           YAHRISYTTFAPPEFGAGQAPLRGALPPAPQ+EQ+RASQLYNFA+LDVGLPK VES EKT
Sbjct: 241 YAHRISYTTFAPPEFGAGQAPLRGALPPAPQEEQLRASQLYNFASLDVGLPKIVESDEKT 300

Query: 301 IEPMIEPPAPVRVDANPLSNMAAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPG 360
           +EPMIEPPAP   ++NPL+N+A IQGLL PNITVPSGWKPGMPVELP DLPMPPPGWKPG
Sbjct: 301 VEPMIEPPAPAPTESNPLANLATIQGLLHPNITVPSGWKPGMPVELPTDLPMPPPGWKPG 360

Query: 361 DPVRLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEG 408
           DPV LPP+ SLPV RV E QLRP       KPPEPIQVR VQLDI+DQDDDSSDY+S+EG
Sbjct: 361 DPVPLPPLASLPVPRVGEQQLRP-------KPPEPIQVRPVQLDIIDQDDDSSDYSSEEG 416

[Close]
BLAST of MELO3C014263 vs. TAIR10
Match: AT5G02850.1 (AT5G02850.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 529.3 bits (1362), Expect = 2.2e-150
Identity = 278/434 (64.06%), Postives = 333/434 (76.73%), Query Frame = 1 

Query: 1   MLQHQIVQSPARLGLTNPNSPSIQNPTP-----PKLPPSQQSHHQ--------------- 60
           MLQHQIVQSPARLGLT P SPS+QNPTP     P    S QS HQ               
Sbjct: 1   MLQHQIVQSPARLGLTGPGSPSVQNPTPTRHGHPTSSSSSQSQHQQIQQQPNLLPSSTVA 60

Query: 61  --NQSNVSSSTPSSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPT 120
             + ++ S++  SS LL LLPPLPRAQALL QMA L SKLF+VSPNR++WL+AFRGSLP+
Sbjct: 61  AASSASASAAVSSSALLSLLPPLPRAQALLQQMAVLTSKLFDVSPNRAIWLSAFRGSLPS 120

Query: 121 FLTSQTQSSPSTFLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIR 180
           FL+S +   P    + +PSS+KEILS FN LQTQLFEAV ELQEILDLQD+KQK+A EI+
Sbjct: 121 FLSSHSLPPPPPLENPSPSSTKEILSQFNSLQTQLFEAVTELQEILDLQDAKQKVAREIK 180

Query: 181 AKDAALRAFANKLKDAEQVLDVLFDDYADYQRPRRVKTEGGAEN----ESLCSTTVASQL 240
           +KD++L AFANKLKDAE+VLD+L DDY+DY++P+R K E   E+     S  STTV+SQL
Sbjct: 181 SKDSSLLAFANKLKDAERVLDMLVDDYSDYRKPKRSKIEEDDEDNDNESSSSSTTVSSQL 240

Query: 241 RLSDILSYAHRISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKA 300
           +L DIL+YAH+ISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLY FA+LD+GLPK 
Sbjct: 241 KLKDILAYAHKISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYTFADLDIGLPKT 300

Query: 301 VESTEKTIEPMIEPPAPVRVDANPLSNMAAIQGLLPPNITVPSGWKPGMPVELPGDLPMP 360
           VE+ EK +E +IEPP P         +++AI  LLPPNI VPSGWKPGMPVELP DLP+P
Sbjct: 301 VENMEKKVEALIEPPPPPEA-----MDISAIHNLLPPNIAVPSGWKPGMPVELPRDLPLP 360

Query: 361 PPGWKPGDPVRLPPMDSLPVTRVDEPQ-LRPNALPGLHKPPEPIQVRHVQLDILDQDDDS 408
           PPGWKPGDPV LPP++S+   R ++ Q +RP+   GLH+PP+ IQVR VQLDIL +DDDS
Sbjct: 361 PPGWKPGDPVVLPPLESIAAPRAEDHQHMRPS--QGLHRPPDVIQVRAVQLDIL-EDDDS 420

[Close]
BLAST of MELO3C014263 vs. NCBI nr
Match: gi|659096787|ref|XP_008449288.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 4 [Cucumis melo])

HSP 1 Score: 813.9 bits (2101), Expect = 1.2e-232
Identity = 407/407 (100.00%), Postives = 407/407 (100.00%), Query Frame = 1 

Query: 1   MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNVSSSTPSSTLLPLLPP 60
           MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNVSSSTPSSTLLPLLPP
Sbjct: 1   MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNVSSSTPSSTLLPLLPP 60

Query: 61  LPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTFLDSTPSSSK 120
           LPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTFLDSTPSSSK
Sbjct: 61  LPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTFLDSTPSSSK 120

Query: 121 EILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDV 180
           EILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDV
Sbjct: 121 EILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDV 180

Query: 181 LFDDYADYQRPRRVKTEGGAENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQ 240
           LFDDYADYQRPRRVKTEGGAENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQ
Sbjct: 181 LFDDYADYQRPRRVKTEGGAENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQ 240

Query: 241 APLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRVDANPLS 300
           APLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRVDANPLS
Sbjct: 241 APLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRVDANPLS 300

Query: 301 NMAAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEP 360
           NMAAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEP
Sbjct: 301 NMAAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEP 360

Query: 361 QLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD 408
           QLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
Sbjct: 361 QLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD 407

[Close]
BLAST of MELO3C014263 vs. NCBI nr
Match: gi|449448711|ref|XP_004142109.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 4 [Cucumis sativus])

HSP 1 Score: 790.0 bits (2039), Expect = 1.9e-225
Identity = 398/407 (97.79%), Postives = 400/407 (98.28%), Query Frame = 1 

Query: 1   MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNVSSSTPSSTLLPLLPP 60
           MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSN+SSSTPSSTLLPLLPP
Sbjct: 1   MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLPPSQQSHHQNQSNLSSSTPSSTLLPLLPP 60

Query: 61  LPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTFLDSTPSSSK 120
           LPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSPST LDSTPSSSK
Sbjct: 61  LPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTLLDSTPSSSK 120

Query: 121 EILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKDAEQVLDV 180
           EILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLK+AEQVLDV
Sbjct: 121 EILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLKEAEQVLDV 180

Query: 181 LFDDYADYQRPRRVKTEGGAENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQ 240
           LFDDYADYQRPRR KTEG AENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQ
Sbjct: 181 LFDDYADYQRPRRDKTEGDAENESLCSTTVASQLRLSDILSYAHRISYTTFAPPEFGAGQ 240

Query: 241 APLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRVDANPLS 300
           APLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVR DANPL 
Sbjct: 241 APLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPAPVRPDANPL- 300

Query: 301 NMAAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEP 360
             AAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEP
Sbjct: 301 --AAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMDSLPVTRVDEP 360

Query: 361 QLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD 408
           QLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD
Sbjct: 361 QLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD 404

[Close]
BLAST of MELO3C014263 vs. NCBI nr
Match: gi|590630241|ref|XP_007027217.1| (Hydroxyproline-rich glycoprotein family protein [Theobroma cacao])

HSP 1 Score: 625.5 bits (1612), Expect = 6.3e-176
Identity = 310/417 (74.34%), Postives = 360/417 (86.33%), Query Frame = 1 

Query: 1   MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLP--------PSQQSHHQNQSNVSSSTPSS 60
           MLQHQIVQSPARLGLTNPNSPS+QNPTPPK P        P QQ    + +N+S++T SS
Sbjct: 1   MLQHQIVQSPARLGLTNPNSPSLQNPTPPKYPSSQPQPQPPPQQQQQPSSTNLSATTTSS 60

Query: 61  TLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSPSTFL 120
            LL LLPPLPRAQ+LLLQMASLASKLFEVSPNR++W++AFRGSLP+FL+SQ Q++P   L
Sbjct: 61  ALLSLLPPLPRAQSLLLQMASLASKLFEVSPNRTVWVSAFRGSLPSFLSSQIQTTPPPPL 120

Query: 121 DSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFANKLK 180
           +STP+S+KE+LSLF  LQTQLFEAVA+LQEILDLQD KQKIA EIR+ D A+ AFANKLK
Sbjct: 121 ESTPTSTKEVLSLFTSLQTQLFEAVAQLQEILDLQDFKQKIAREIRSNDGAILAFANKLK 180

Query: 181 DAEQVLDVLFDDYADYQRPRRVKTE--GGAENESLCSTTVASQLRLSDILSYAHRISYTT 240
           +AE+VLD+L DDY+DY+RP+R+K E  GG  ++   +TTVASQL LSDILSYAHRISYTT
Sbjct: 181 EAERVLDMLVDDYSDYRRPKRLKLEEDGGGGDDDSSTTTVASQLNLSDILSYAHRISYTT 240

Query: 241 FAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPMIEPPA 300
           FAPPEFGAGQAPLRGALPPAPQ+EQMRASQLY FA+LDVGLPKAVE+ EK +E +IEPP 
Sbjct: 241 FAPPEFGAGQAPLRGALPPAPQEEQMRASQLYAFADLDVGLPKAVEAKEKAVEAIIEPPP 300

Query: 301 PVRVDANPLSNMAAIQGLLPPNITVPSGWKPGMPVELPGDLPMPPPGWKPGDPVRLPPMD 360
              VD NPL+N+AA+QGLLPPN TVPSGWKPGMPVELP +LP+PPPGWKPGDPV LPP+D
Sbjct: 301 AQPVDTNPLANLAALQGLLPPNFTVPSGWKPGMPVELPTNLPVPPPGWKPGDPVPLPPLD 360

Query: 361 SLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSEDDD 408
           SLP+ R++EP LRP   PGLHKPPEPIQVRHV+LDILD DDDSSDY+SDEGSS+D+D
Sbjct: 361 SLPIPRMEEPHLRPVPPPGLHKPPEPIQVRHVELDILDPDDDSSDYSSDEGSSDDED 417

[Close]
BLAST of MELO3C014263 vs. NCBI nr
Match: gi|568853904|ref|XP_006480577.1| (PREDICTED: mediator of RNA polymerase II transcription subunit 4 [Citrus sinensis])

HSP 1 Score: 602.8 bits (1553), Expect = 4.4e-169
Identity = 310/422 (73.46%), Postives = 351/422 (83.18%), Query Frame = 1 

Query: 1   MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLP---PSQQSHHQNQSNVSSSTP------- 60
           MLQHQIVQSPARLGLTNPNSPS+QNP P   P   P+  +HH  +S    + P       
Sbjct: 1   MLQHQIVQSPARLGLTNPNSPSLQNPNPNPSPTKFPTSATHHHLRSATPPTAPITTGTTA 60

Query: 61  --SSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSP 120
             SSTLL LLPPLPRAQALLLQMASLASKLFEVSPNRSLW++AFRGSLPTFL+SQ QS P
Sbjct: 61  CTSSTLLSLLPPLPRAQALLLQMASLASKLFEVSPNRSLWISAFRGSLPTFLSSQAQSQP 120

Query: 121 STFLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFA 180
              +DS+PS+ KEI++ F  LQTQLFEAVAELQEILDLQD+KQKIA EI+AKD+A+ AFA
Sbjct: 121 PPPIDSSPSTIKEIIACFTSLQTQLFEAVAELQEILDLQDAKQKIAREIKAKDSAILAFA 180

Query: 181 NKLKDAEQVLDVLFDDYADYQRPRRVKTEGGAENE---SLCSTTVASQLRLSDILSYAHR 240
           NK+K+AE+VLD+L DDY+DY+RP+RVK+EGG  N+     CSTTV SQL LSDILSYAHR
Sbjct: 181 NKIKEAERVLDILVDDYSDYRRPKRVKSEGGDGNDDDSGSCSTTVESQLNLSDILSYAHR 240

Query: 241 ISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPM 300
           ISYTTFAPPEFGAGQ PLRGALPPAPQ+EQMRASQLY FA+LDVGLPK VE+ EKTIE +
Sbjct: 241 ISYTTFAPPEFGAGQGPLRGALPPAPQEEQMRASQLYTFADLDVGLPKVVETKEKTIEAI 300

Query: 301 IEPPAPVRVDANPLSNMAAIQGLLPPNITVPSGWKPGMPVELPGDLPM-PPPGWKPGDPV 360
           IEPP    VDANPL ++A   GLLPPNITVPSGWKPGMPVELP D P+ PPPGWKPGD V
Sbjct: 301 IEPPPLQPVDANPLKDLA---GLLPPNITVPSGWKPGMPVELPKDFPLVPPPGWKPGDAV 360

Query: 361 RLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSE 407
            LPP+D+LP+ R++E QLRP    GLHKPPEPIQVRHV+LDILDQDDDSSDY+S+EGSSE
Sbjct: 361 PLPPLDALPMPRIEEQQLRPVPPQGLHKPPEPIQVRHVELDILDQDDDSSDYSSEEGSSE 419

[Close]
BLAST of MELO3C014263 vs. NCBI nr
Match: gi|641832873|gb|KDO51897.1| (hypothetical protein CISIN_1g044000mg [Citrus sinensis])

HSP 1 Score: 601.3 bits (1549), Expect = 1.3e-168
Identity = 309/422 (73.22%), Postives = 351/422 (83.18%), Query Frame = 1 

Query: 1   MLQHQIVQSPARLGLTNPNSPSIQNPTPPKLP---PSQQSHHQNQSNVSSSTP------- 60
           MLQHQIVQSPARLGLTNPNSPS+QNP P   P   P+  +HH  +S    + P       
Sbjct: 1   MLQHQIVQSPARLGLTNPNSPSLQNPNPNPSPTKFPTSATHHHLRSATPPTAPITTGTTA 60

Query: 61  --SSTLLPLLPPLPRAQALLLQMASLASKLFEVSPNRSLWLTAFRGSLPTFLTSQTQSSP 120
             SSTLL LLPPLPRAQALLLQMASLASKLFEVSPNRSLW++AFRGSLPTFL+SQ QS P
Sbjct: 61  CTSSTLLSLLPPLPRAQALLLQMASLASKLFEVSPNRSLWISAFRGSLPTFLSSQAQSQP 120

Query: 121 STFLDSTPSSSKEILSLFNVLQTQLFEAVAELQEILDLQDSKQKIAYEIRAKDAALRAFA 180
              +DS+PS+ KEI++ F  LQTQLFEAVAELQEILDLQD+KQKIA EI+AKD+A+ AFA
Sbjct: 121 PPPIDSSPSTIKEIIACFTSLQTQLFEAVAELQEILDLQDAKQKIAREIKAKDSAILAFA 180

Query: 181 NKLKDAEQVLDVLFDDYADYQRPRRVKTEGGAENE---SLCSTTVASQLRLSDILSYAHR 240
           NK+K+AE+VLD+L DDY+DY+RP+RVK+EGG  N+     CSTTV S+L LSDILSYAHR
Sbjct: 181 NKIKEAERVLDILVDDYSDYRRPKRVKSEGGDGNDDDSGSCSTTVESRLNLSDILSYAHR 240

Query: 241 ISYTTFAPPEFGAGQAPLRGALPPAPQDEQMRASQLYNFANLDVGLPKAVESTEKTIEPM 300
           ISYTTFAPPEFGAGQ PLRGALPPAPQ+EQMRASQLY FA+LDVGLPK VE+ EKTIE +
Sbjct: 241 ISYTTFAPPEFGAGQGPLRGALPPAPQEEQMRASQLYTFADLDVGLPKVVETKEKTIEAI 300

Query: 301 IEPPAPVRVDANPLSNMAAIQGLLPPNITVPSGWKPGMPVELPGDLPM-PPPGWKPGDPV 360
           IEPP    VDANPL ++A   GLLPPNITVPSGWKPGMPVELP D P+ PPPGWKPGD V
Sbjct: 301 IEPPPLQPVDANPLKDLA---GLLPPNITVPSGWKPGMPVELPKDFPLVPPPGWKPGDAV 360

Query: 361 RLPPMDSLPVTRVDEPQLRPNALPGLHKPPEPIQVRHVQLDILDQDDDSSDYTSDEGSSE 407
            LPP+D+LP+ R++E QLRP    GLHKPPEPIQVRHV+LDILDQDDDSSDY+S+EGSSE
Sbjct: 361 PLPPLDALPMPRIEEQQLRPVPPQGLHKPPEPIQVRHVELDILDQDDDSSDYSSEEGSSE 419

The following BLAST results are available for this feature:
BLAST of MELO3C014263 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MED4_ARATH3.8e-14964.06Mediator of RNA polymerase II transcription subunit 4 OS=Arabidopsis thaliana GN... [more]
BLAST of MELO3C014263 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KXB7_CUCSA1.3e-22597.79Uncharacterized protein OS=Cucumis sativus GN=Csa_4G292980 PE=4 SV=1[more]
A0A061EZR1_THECC4.4e-17674.34Hydroxyproline-rich glycoprotein family protein OS=Theobroma cacao GN=TCM_022075... [more]
A0A067EL12_CITSI8.9e-16973.22Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g044000mg PE=4 SV=1[more]
V4ST57_9ROSI1.5e-16873.22Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011831mg PE=4 SV=1[more]
W9RBW9_9ROSA2.4e-16673.00Uncharacterized protein OS=Morus notabilis GN=L484_013165 PE=4 SV=1[more]
BLAST of MELO3C014263 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G02850.12.2e-15064.06 hydroxyproline-rich glycoprotein family protein[more]
BLAST of MELO3C014263 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659096787|ref|XP_008449288.1|1.2e-232100.00PREDICTED: mediator of RNA polymerase II transcription subunit 4 [Cucumis melo][more]
gi|449448711|ref|XP_004142109.1|1.9e-22597.79PREDICTED: mediator of RNA polymerase II transcription subunit 4 [Cucumis sativu... [more]
gi|590630241|ref|XP_007027217.1|6.3e-17674.34Hydroxyproline-rich glycoprotein family protein [Theobroma cacao][more]
gi|568853904|ref|XP_006480577.1|4.4e-16973.46PREDICTED: mediator of RNA polymerase II transcription subunit 4 [Citrus sinensi... [more]
gi|641832873|gb|KDO51897.1|1.3e-16873.22hypothetical protein CISIN_1g044000mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019258Mediator_Med4
Vocabulary: Molecular Function
TermDefinition
GO:0001104RNA polymerase II transcription cofactor activity
Vocabulary: Biological Process
TermDefinition
GO:0006357regulation of transcription from RNA polymerase II promoter
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
biological_process GO:0006412 translation
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0016592 mediator complex
cellular_component GO:0070847 core mediator complex
cellular_component GO:0005840 ribosome
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0001104 RNA polymerase II transcription cofactor activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003712 transcription cofactor activity
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU53787melon EST collection version 4.0transcribed_cluster
MU59023melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C014263T1MELO3C014263T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU59023MU59023transcribed_cluster
MU53787MU53787transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019258Mediator complex, subunit Med4PFAMPF10018Med4coord: 129..269
score: 1.
NoneNo IPR availablePANTHERPTHR13208MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 4coord: 206..407
score: 4.7E-100coord: 20..190
score: 4.7E