MELO3C013553 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C013553
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionArchaeal Lon protease
Locationchr11 : 16580551 .. 16581569 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCGTTTGAGAAACCAACGAAACTTGTCTATTCGAACAATAATAACATTGTGCTCTGTTTCCAACCCGGCGTAGACATGGGAACCGTTCGCCACACCAAACCCCCCACCACTTTGGCTGCTTTTCTTGACCTGGAGGACCAACAAACCCAATCTTGCCCCAATTGTCGCTGCTCCAGAAATTCCGCGATTTCTCTCCCGCCAAAGCCAGCTCTCTCTCGGACCGCTAGAGCCATCGTCTTTGGTACGATTCTGGTCAGTACTGAATTTTGCTGTTCTTCACTTTTTTTCAACTTTGTTCCTTTTTATAAAGCTTTTGTTCTATTTTAGATCAAAAGAGTTCGTGAGAGAAAAACCCACCGTCAACCAAAATATGACGGTCGGAAGCGAAGTTTGTTGCTGGATTCTGTAAGGGTTCCCGTAAAGGAAAACAGGGAATCGGTGAAAAGAGAATTGGACGGAATTTATCAAGAAAACAGAGAGATTCCTCTTTCATCTGGTTCGATTCAATCCTTTTCAATTTCAATATCAGAACCCAAAATTTCAAATAAGAAAACTGGCTGTGGCAATGAAGCCATTGGCGTGAAGCAGAGAGAGGTGGAGCGGAGCAGGAGGAGTTGCTATGCATTCAATTCTAGCGTTAGATTGCTTATGGTGAGTCTTGGAGTGACAGTGATGCAAGGCAGAGTACTTGGAATTTTGATCACTTCAATTTCGGTCTACTTTTTTGCTTGGATGCAGATGGAGGATTGTTGGCTGAAGAATAAAGCAACAAAATTTATGGAAAACCGAGAAAATAGGCATTAAATCTTTGACTTGAAAAATCTTTATCATTTGTGGAAGTTCTCACTTGTCAAAAGGACTGTGTTTTCTGTTCCTCTTCTTCTCCATTACATTCTGTTTTTTTACCCGTTGGATTCTGTTTTATTGTTTTGAGAAATCCTTTCCTTAAGCCAGGTGTTGGATTTTGATGTTAGTCAATCCATTTGGTTGTGAAAGTTAAACCCAATTATAACTCTGG

mRNA sequence

AGCGTTTGAGAAACCAACGAAACTTGTCTATTCGAACAATAATAACATTGTGCTCTGTTTCCAACCCGGCGTAGACATGGGAACCGTTCGCCACACCAAACCCCCCACCACTTTGGCTGCTTTTCTTGACCTGGAGGACCAACAAACCCAATCTTGCCCCAATTGTCGCTGCTCCAGAAATTCCGCGATTTCTCTCCCGCCAAAGCCAGCTCTCTCTCGGACCGCTAGAGCCATCGTCTTTGGTACGATTCTGATCAAAAGAGTTCGTGAGAGAAAAACCCACCGTCAACCAAAATATGACGGTCGGAAGCGAAGTTTGTTGCTGGATTCTGTAAGGGTTCCCGTAAAGGAAAACAGGGAATCGGTGAAAAGAGAATTGGACGGAATTTATCAAGAAAACAGAGAGATTCCTCTTTCATCTGGTTCGATTCAATCCTTTTCAATTTCAATATCAGAACCCAAAATTTCAAATAAGAAAACTGGCTGTGGCAATGAAGCCATTGGCGTGAAGCAGAGAGAGGTGGAGCGGAGCAGGAGGAGTTGCTATGCATTCAATTCTAGCGTTAGATTGCTTATGGTGAGTCTTGGAGTGACAGTGATGCAAGGCAGAGTACTTGGAATTTTGATCACTTCAATTTCGGTCTACTTTTTTGCTTGGATGCAGATGGAGGATTGTTGGCTGAAGAATAAAGCAACAAAATTTATGGAAAACCGAGAAAATAGGCATTAAATCTTTGACTTGAAAAATCTTTATCATTTGTGGAAGTTCTCACTTGTCAAAAGGACTGTGTTTTCTGTTCCTCTTCTTCTCCATTACATTCTGTTTTTTTACCCGTTGGATTCTGTTTTATTGTTTTGAGAAATCCTTTCCTTAAGCCAGGTGTTGGATTTTGATGTTAGTCAATCCATTTGGTTGTGAAAGTTAAACCCAATTATAACTCTGG

Coding sequence (CDS)

ATGGGAACCGTTCGCCACACCAAACCCCCCACCACTTTGGCTGCTTTTCTTGACCTGGAGGACCAACAAACCCAATCTTGCCCCAATTGTCGCTGCTCCAGAAATTCCGCGATTTCTCTCCCGCCAAAGCCAGCTCTCTCTCGGACCGCTAGAGCCATCGTCTTTGGTACGATTCTGATCAAAAGAGTTCGTGAGAGAAAAACCCACCGTCAACCAAAATATGACGGTCGGAAGCGAAGTTTGTTGCTGGATTCTGTAAGGGTTCCCGTAAAGGAAAACAGGGAATCGGTGAAAAGAGAATTGGACGGAATTTATCAAGAAAACAGAGAGATTCCTCTTTCATCTGGTTCGATTCAATCCTTTTCAATTTCAATATCAGAACCCAAAATTTCAAATAAGAAAACTGGCTGTGGCAATGAAGCCATTGGCGTGAAGCAGAGAGAGGTGGAGCGGAGCAGGAGGAGTTGCTATGCATTCAATTCTAGCGTTAGATTGCTTATGGTGAGTCTTGGAGTGACAGTGATGCAAGGCAGAGTACTTGGAATTTTGATCACTTCAATTTCGGTCTACTTTTTTGCTTGGATGCAGATGGAGGATTGTTGGCTGAAGAATAAAGCAACAAAATTTATGGAAAACCGAGAAAATAGGCATTAA

Protein sequence

MGTVRHTKPPTTLAAFLDLEDQQTQSCPNCRCSRNSAISLPPKPALSRTARAIVFGTILIKRVRERKTHRQPKYDGRKRSLLLDSVRVPVKENRESVKRELDGIYQENREIPLSSGSIQSFSISISEPKISNKKTGCGNEAIGVKQREVERSRRSCYAFNSSVRLLMVSLGVTVMQGRVLGILITSISVYFFAWMQMEDCWLKNKATKFMENRENRH*
Homology
[Close]
BLAST of MELO3C013553 vs. TrEMBL
Match: A0A0A0KE38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G121450 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 2.4e-104
Identity = 199/217 (91.71%), Postives = 201/217 (92.63%), Query Frame = 1 

Query: 1   MGTVRHTKPPTTLAAFLDLEDQQTQSCPNCRCSRNSAISLPPKPALSRTARAIVFGTILI 60
           M TVRHTKP TTLAA+LDLEDQQTQSCP CRCS NSAISL PKPALSRTARAIVFGTILI
Sbjct: 1   MATVRHTKPTTTLAAYLDLEDQQTQSCPTCRCSTNSAISLRPKPALSRTARAIVFGTILI 60

Query: 61  KRVRERKTHRQPKYDGRKRSLLLDSVRVPVKENRESVKRELDGIYQENREIPLSSGSIQS 120
           KRVRERK HRQPK DGRKRSL LDSVRVPVKENRE VK+ELDGI QENREI LSSGSIQS
Sbjct: 61  KRVRERKIHRQPKSDGRKRSLSLDSVRVPVKENRELVKKELDGINQENREISLSSGSIQS 120

Query: 121 FSISISEPKISNKKTGCGNEAIGVKQREVERSRRSCYAFNSSVRLLMVSLGVTVMQGRVL 180
           FSISISEPKISNKKTGCG EAIGVKQREVE SRRSCYAFNSSVRLLMVSLGVTVMQGRVL
Sbjct: 121 FSISISEPKISNKKTGCGIEAIGVKQREVEWSRRSCYAFNSSVRLLMVSLGVTVMQGRVL 180

Query: 181 GILITSISVYFFAWMQMEDCWLKNKATKFMENRENRH 218
           GILITSISVYFFAWMQMEDCWLK KATK ME RENRH
Sbjct: 181 GILITSISVYFFAWMQMEDCWLKKKATKCMEKRENRH 217

[Close]
BLAST of MELO3C013553 vs. TrEMBL
Match: A0A061E4J7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007861 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-06
Identity = 59/198 (29.80%), Postives = 93/198 (46.97%), Query Frame = 1 

Query: 18  DLEDQQTQSCPNCRCSRNSAISLPP-KPALSRTARAIVFGTILIKRVRERKTHRQPKYDG 77
           D++   T+S  +   + NS + L P K   S+  +A+VF  IL+KRV +RK   Q  Y  
Sbjct: 48  DIKPSMTKS--SVSDTENSILILRPGKKTFSQVIKAVVFEIILVKRVLDRKVIHQGSYSS 107

Query: 78  R------KRSLLLDSVRVPVKENRESVKREL-DGIYQENREIPLSSGSIQSFSISIS--- 137
           +       R  LLD+  +    N+    +E+ D I + N    +SS S  S S S +   
Sbjct: 108 KHSFPLSSRDKLLDA-SLGKSVNKVLAGKEIRDTISKSNSVSSVSSCSSSSSSSSPNSTQ 167

Query: 138 ---EPKISNKKTGCGN--EAIGVKQREVERSRRSCYAFNSSVRLLMVSLGVTVMQGRVLG 197
                K+ NK T   +    +  K  +++R   S    NS++ LL+ SL VT+  G++  
Sbjct: 168 NQKRQKLQNKNTYSNHRESEMNPKHEQIDRGSSS----NSAIFLLLASLAVTIFWGKICA 227

Query: 198 ILITSISVYFFAWMQMED 200
           I  TS+ +YF    Q  D
Sbjct: 228 IFFTSMWLYFLPHQQPAD 238

[Close]
BLAST of MELO3C013553 vs. NCBI nr
Match: gi|659094757|ref|XP_008448227.1| (PREDICTED: uncharacterized protein LOC103490482 [Cucumis melo])

HSP 1 Score: 433.3 bits (1113), Expect = 2.5e-118
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1 

Query: 1   MGTVRHTKPPTTLAAFLDLEDQQTQSCPNCRCSRNSAISLPPKPALSRTARAIVFGTILI 60
           MGTVRHTKPPTTLAAFLDLEDQQTQSCPNCRCSRNSAISLPPKPALSRTARAIVFGTILI
Sbjct: 1   MGTVRHTKPPTTLAAFLDLEDQQTQSCPNCRCSRNSAISLPPKPALSRTARAIVFGTILI 60

Query: 61  KRVRERKTHRQPKYDGRKRSLLLDSVRVPVKENRESVKRELDGIYQENREIPLSSGSIQS 120
           KRVRERKTHRQPKYDGRKRSLLLDSVRVPVKENRESVKRELDGIYQENREIPLSSGSIQS
Sbjct: 61  KRVRERKTHRQPKYDGRKRSLLLDSVRVPVKENRESVKRELDGIYQENREIPLSSGSIQS 120

Query: 121 FSISISEPKISNKKTGCGNEAIGVKQREVERSRRSCYAFNSSVRLLMVSLGVTVMQGRVL 180
           FSISISEPKISNKKTGCGNEAIGVKQREVERSRRSCYAFNSSVRLLMVSLGVTVMQGRVL
Sbjct: 121 FSISISEPKISNKKTGCGNEAIGVKQREVERSRRSCYAFNSSVRLLMVSLGVTVMQGRVL 180

Query: 181 GILITSISVYFFAWMQMEDCWLKNKATKFMENRENRH 218
           GILITSISVYFFAWMQMEDCWLKNKATKFMENRENRH
Sbjct: 181 GILITSISVYFFAWMQMEDCWLKNKATKFMENRENRH 217

[Close]
BLAST of MELO3C013553 vs. NCBI nr
Match: gi|449444407|ref|XP_004139966.1| (PREDICTED: uncharacterized protein LOC101210838 [Cucumis sativus])

HSP 1 Score: 386.3 bits (991), Expect = 3.4e-104
Identity = 199/217 (91.71%), Postives = 201/217 (92.63%), Query Frame = 1 

Query: 1   MGTVRHTKPPTTLAAFLDLEDQQTQSCPNCRCSRNSAISLPPKPALSRTARAIVFGTILI 60
           M TVRHTKP TTLAA+LDLEDQQTQSCP CRCS NSAISL PKPALSRTARAIVFGTILI
Sbjct: 1   MATVRHTKPTTTLAAYLDLEDQQTQSCPTCRCSTNSAISLRPKPALSRTARAIVFGTILI 60

Query: 61  KRVRERKTHRQPKYDGRKRSLLLDSVRVPVKENRESVKRELDGIYQENREIPLSSGSIQS 120
           KRVRERK HRQPK DGRKRSL LDSVRVPVKENRE VK+ELDGI QENREI LSSGSIQS
Sbjct: 61  KRVRERKIHRQPKSDGRKRSLSLDSVRVPVKENRELVKKELDGINQENREISLSSGSIQS 120

Query: 121 FSISISEPKISNKKTGCGNEAIGVKQREVERSRRSCYAFNSSVRLLMVSLGVTVMQGRVL 180
           FSISISEPKISNKKTGCG EAIGVKQREVE SRRSCYAFNSSVRLLMVSLGVTVMQGRVL
Sbjct: 121 FSISISEPKISNKKTGCGIEAIGVKQREVEWSRRSCYAFNSSVRLLMVSLGVTVMQGRVL 180

Query: 181 GILITSISVYFFAWMQMEDCWLKNKATKFMENRENRH 218
           GILITSISVYFFAWMQMEDCWLK KATK ME RENRH
Sbjct: 181 GILITSISVYFFAWMQMEDCWLKKKATKCMEKRENRH 217

[Close]
BLAST of MELO3C013553 vs. NCBI nr
Match: gi|1009128008|ref|XP_015880996.1| (PREDICTED: uncharacterized protein At5g23160-like [Ziziphus jujuba])

HSP 1 Score: 77.8 bits (190), Expect = 2.6e-11
Identity = 70/207 (33.82%), Postives = 97/207 (46.86%), Query Frame = 1 

Query: 29  NCRCSRNSAISL---PPKPALSRTARAIVFGTILIKRVRERKTHRQPKYDGRKRSLLLDS 88
           N  CS NS  S+   P K + SR  +A+ F TIL KRVR+RK  R          LL  S
Sbjct: 59  NSGCSMNSENSITLQPQKRSFSRVIKAVFFETILAKRVRDRKESRS------NIMLLSKS 118

Query: 89  VRVPVKENRESVKRELDGIYQEN-----REIPLSSG---SIQSFSISISEPKISNKKT-- 148
            R   + + +S   EL  +   N     +EI    G   S  S S S  EPKIS++ +  
Sbjct: 119 SR---QRSSDSDSDELMNLSPANSNFQFQEIETKMGLFHSSTSLSNSTPEPKISSRNSVK 178

Query: 149 ----GCGNEAIGVKQREVERSRRSCYAFNSSVRLLMVSLGVTVMQGRVLGILITSISVYF 208
                  N   G  + + E + + C   NS + LL++SL VTV+ GR+  IL TSI  YF
Sbjct: 179 QKLEKQRNHQHGEPETKSEETNKRCSVLNSGLYLLLISLTVTVLWGRICAILFTSIWFYF 238

Query: 209 FAWMQMED--CWLKNKATKFMENRENR 217
            +    E+  C       K+ E RE++
Sbjct: 239 LSCWSPENLRCRRTESVRKWPEERESK 256

[Close]
BLAST of MELO3C013553 vs. NCBI nr
Match: gi|694324381|ref|XP_009353215.1| (PREDICTED: uncharacterized protein LOC103944478 [Pyrus x bretschneideri])

HSP 1 Score: 75.1 bits (183), Expect = 1.7e-10
Identity = 60/177 (33.90%), Postives = 89/177 (50.28%), Query Frame = 1 

Query: 33  SRNSAISLPPKPA--LSRTARAIVFGTILIKRVRERKTHRQPKYDGRKRSLLLDSVRVPV 92
           S NS   +PP+P+   S+  +A+VF TIL K+ R+RK  RQ  + G KR   L S     
Sbjct: 65  SENS--KMPPRPSRTFSKAVKAVVFETILAKKARDRKVCRQDSF-GSKRCFSLRSEASLN 124

Query: 93  KENRESVKRELDGIYQENREIP---------LSSGSIQSFSISISEPK-ISNKKTGCGNE 152
               ESVK+     ++E + I           SS S  S S S+SE K +S   +    +
Sbjct: 125 LGGDESVKK-----FEETKPISEMSLHSRSSSSSSSALSSSSSVSESKRLSKTFSDPTKQ 184

Query: 153 AIGVKQREVERSRRS---CYAFNSSVRLLMVSLGVTVMQGRVLGILITSISVYFFAW 195
           ++   Q    + + +   C  FNS    L++SL VTV  G+ + IL++SI +YFF W
Sbjct: 185 SLRNPQNPAAKPKNTEVVCSGFNSGTYFLLISLAVTVFWGKAIAILVSSIWLYFFPW 233

[Close]
BLAST of MELO3C013553 vs. NCBI nr
Match: gi|658013291|ref|XP_008341940.1| (PREDICTED: uncharacterized protein LOC103404762 [Malus domestica])

HSP 1 Score: 74.7 bits (182), Expect = 2.2e-10
Identity = 56/180 (31.11%), Postives = 87/180 (48.33%), Query Frame = 1 

Query: 25  QSCPNCRCSRNSAISLPPKPALSRTARAIVFGTILIKRVRERKTHRQPKYDGRK------ 84
           + C +   S NS +   P    S+  +A+VF TIL KR R+RK  RQ  +  ++      
Sbjct: 57  RGCSSPADSENSNMPPHPNKTFSKAVKAVVFETILAKRDRDRKVCRQDSFGSKRCFSFRN 116

Query: 85  -RSLLL---DSVRVPVKENRESVKRELDGIYQENREIPLSSGSIQSFSISISEPKISNKK 144
             SL L   +SV+V ++E + + +  L      +    LSS S  S S  +S+      K
Sbjct: 117 EASLNLGGDESVKV-IEETKPNSEMSLHSRSSSSSLSALSSSSSVSESERLSKTLSDPTK 176

Query: 145 TGCGNEAIGVKQREVERSRRSCYAFNSSVRLLMVSLGVTVMQGRVLGILITSISVYFFAW 195
              GN        + + ++   Y FNS    L++SL VTV  G+ + IL++SI +YFF W
Sbjct: 177 QSLGNP--NNPAAKPKNTKVGSYCFNSGTYFLLISLAVTVFWGKAIAILVSSIWIYFFPW 233

The following BLAST results are available for this feature:
BLAST of MELO3C013553 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KE38_CUCSA2.4e-10491.71Uncharacterized protein OS=Cucumis sativus GN=Csa_6G121450 PE=4 SV=1[more]
A0A061E4J7_THECC1.0e-0629.80Uncharacterized protein OS=Theobroma cacao GN=TCM_007861 PE=4 SV=1[more]
BLAST of MELO3C013553 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659094757|ref|XP_008448227.1|2.5e-118100.00PREDICTED: uncharacterized protein LOC103490482 [Cucumis melo][more]
gi|449444407|ref|XP_004139966.1|3.4e-10491.71PREDICTED: uncharacterized protein LOC101210838 [Cucumis sativus][more]
gi|1009128008|ref|XP_015880996.1|2.6e-1133.82PREDICTED: uncharacterized protein At5g23160-like [Ziziphus jujuba][more]
gi|694324381|ref|XP_009353215.1|1.7e-1033.90PREDICTED: uncharacterized protein LOC103944478 [Pyrus x bretschneideri][more]
gi|658013291|ref|XP_008341940.1|2.2e-1031.11PREDICTED: uncharacterized protein LOC103404762 [Malus domestica][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU51132melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013553T1MELO3C013553T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU51132MU51132transcribed_cluster