Csa6G121450 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa6G121450
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr6 : 8387628 .. 8388356 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACCGTTCGCCACACCAAACCCACCACCACATTGGCTGCTTATCTTGATCTGGAGGACCAACAAACCCAATCTTGCCCCACTTGTCGCTGCTCCACAAATTCCGCCATTTCTCTCCGGCCAAAGCCAGCTCTCTCTCGGACTGCGAGAGCCATCGTCTTTGGTACGATTCTGGTCAGTACTGAATTTTGGTGTCCTTTATTTTTTTTTAACTTTATTCCTTTTTATAAATATTTTGTTCTGATTTAGATCAAAAGAGTTCGTGAGAGAAAAATCCACCGTCAACCGAAATCTGACGGTCGGAAGCGAAGTTTGTCGCTGGATTCTGTAAGGGTTCCGGTAAAGGAAAACAGGGAATTGGTGAAAAAAGAATTGGACGGAATTAATCAAGAAAACAGAGAGATTTCTCTTTCATCTGGTTCAATACAATCTTTTTCAATTTCAATATCAGAACCCAAAATTTCGAATAAGAAAACAGGCTGTGGGATTGAAGCCATTGGCGTGAAGCAGAGAGAGGTGGAGTGGAGCAGGAGAAGTTGCTATGCATTCAATTCTAGCGTTAGATTGCTTATGGTGAGTCTTGGAGTGACAGTGATGCAAGGCAGAGTACTCGGAATTTTGATCACATCAATTTCGGTCTACTTTTTTGCTTGGATGCAGATGGAGGATTGTTGGTTGAAGAAGAAGGCAACAAAATGTATGGAAAAACGAGAAAATAGGCATTAA

mRNA sequence

ATGGCAACCGTTCGCCACACCAAACCCACCACCACATTGGCTGCTTATCTTGATCTGGAGGACCAACAAACCCAATCTTGCCCCACTTGTCGCTGCTCCACAAATTCCGCCATTTCTCTCCGGCCAAAGCCAGCTCTCTCTCGGACTGCGAGAGCCATCGTCTTTGGTACGATTCTGATCAAAAGAGTTCGTGAGAGAAAAATCCACCGTCAACCGAAATCTGACGGTCGGAAGCGAAGTTTGTCGCTGGATTCTGTAAGGGTTCCGGTAAAGGAAAACAGGGAATTGGTGAAAAAAGAATTGGACGGAATTAATCAAGAAAACAGAGAGATTTCTCTTTCATCTGGTTCAATACAATCTTTTTCAATTTCAATATCAGAACCCAAAATTTCGAATAAGAAAACAGGCTGTGGGATTGAAGCCATTGGCGTGAAGCAGAGAGAGGTGGAGTGGAGCAGGAGAAGTTGCTATGCATTCAATTCTAGCGTTAGATTGCTTATGGTGAGTCTTGGAGTGACAGTGATGCAAGGCAGAGTACTCGGAATTTTGATCACATCAATTTCGGTCTACTTTTTTGCTTGGATGCAGATGGAGGATTGTTGGTTGAAGAAGAAGGCAACAAAATGTATGGAAAAACGAGAAAATAGGCATTAA

Coding sequence (CDS)

ATGGCAACCGTTCGCCACACCAAACCCACCACCACATTGGCTGCTTATCTTGATCTGGAGGACCAACAAACCCAATCTTGCCCCACTTGTCGCTGCTCCACAAATTCCGCCATTTCTCTCCGGCCAAAGCCAGCTCTCTCTCGGACTGCGAGAGCCATCGTCTTTGGTACGATTCTGATCAAAAGAGTTCGTGAGAGAAAAATCCACCGTCAACCGAAATCTGACGGTCGGAAGCGAAGTTTGTCGCTGGATTCTGTAAGGGTTCCGGTAAAGGAAAACAGGGAATTGGTGAAAAAAGAATTGGACGGAATTAATCAAGAAAACAGAGAGATTTCTCTTTCATCTGGTTCAATACAATCTTTTTCAATTTCAATATCAGAACCCAAAATTTCGAATAAGAAAACAGGCTGTGGGATTGAAGCCATTGGCGTGAAGCAGAGAGAGGTGGAGTGGAGCAGGAGAAGTTGCTATGCATTCAATTCTAGCGTTAGATTGCTTATGGTGAGTCTTGGAGTGACAGTGATGCAAGGCAGAGTACTCGGAATTTTGATCACATCAATTTCGGTCTACTTTTTTGCTTGGATGCAGATGGAGGATTGTTGGTTGAAGAAGAAGGCAACAAAATGTATGGAAAAACGAGAAAATAGGCATTAA

Protein sequence

MATVRHTKPTTTLAAYLDLEDQQTQSCPTCRCSTNSAISLRPKPALSRTARAIVFGTILIKRVRERKIHRQPKSDGRKRSLSLDSVRVPVKENRELVKKELDGINQENREISLSSGSIQSFSISISEPKISNKKTGCGIEAIGVKQREVEWSRRSCYAFNSSVRLLMVSLGVTVMQGRVLGILITSISVYFFAWMQMEDCWLKKKATKCMEKRENRH*
Homology
[Close]
BLAST of Csa6G121450 vs. TrEMBL
Match: A0A0A0KE38_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G121450 PE=4 SV=1)

HSP 1 Score: 429.9 bits (1104), Expect = 1.9e-117
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1 

Query: 1   MATVRHTKPTTTLAAYLDLEDQQTQSCPTCRCSTNSAISLRPKPALSRTARAIVFGTILI 60
           MATVRHTKPTTTLAAYLDLEDQQTQSCPTCRCSTNSAISLRPKPALSRTARAIVFGTILI
Sbjct: 1   MATVRHTKPTTTLAAYLDLEDQQTQSCPTCRCSTNSAISLRPKPALSRTARAIVFGTILI 60

Query: 61  KRVRERKIHRQPKSDGRKRSLSLDSVRVPVKENRELVKKELDGINQENREISLSSGSIQS 120
           KRVRERKIHRQPKSDGRKRSLSLDSVRVPVKENRELVKKELDGINQENREISLSSGSIQS
Sbjct: 61  KRVRERKIHRQPKSDGRKRSLSLDSVRVPVKENRELVKKELDGINQENREISLSSGSIQS 120

Query: 121 FSISISEPKISNKKTGCGIEAIGVKQREVEWSRRSCYAFNSSVRLLMVSLGVTVMQGRVL 180
           FSISISEPKISNKKTGCGIEAIGVKQREVEWSRRSCYAFNSSVRLLMVSLGVTVMQGRVL
Sbjct: 121 FSISISEPKISNKKTGCGIEAIGVKQREVEWSRRSCYAFNSSVRLLMVSLGVTVMQGRVL 180

Query: 181 GILITSISVYFFAWMQMEDCWLKKKATKCMEKRENRH 218
           GILITSISVYFFAWMQMEDCWLKKKATKCMEKRENRH
Sbjct: 181 GILITSISVYFFAWMQMEDCWLKKKATKCMEKRENRH 217

[Close]
BLAST of Csa6G121450 vs. TrEMBL
Match: A0A061E4J7_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007861 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 9.4e-08
Identity = 62/196 (31.63%), Postives = 94/196 (47.96%), Query Frame = 1 

Query: 18  DLEDQQTQSCPTCRCSTNSAISLRP-KPALSRTARAIVFGTILIKRVRERKIHRQPKSDG 77
           D++   T+S  +   + NS + LRP K   S+  +A+VF  IL+KRV +RK+  Q  S  
Sbjct: 48  DIKPSMTKS--SVSDTENSILILRPGKKTFSQVIKAVVFEIILVKRVLDRKVIHQ-GSYS 107

Query: 78  RKRSLSLDS------VRVPVKENRELVKKEL-DGINQENREISLSSGSIQSFSISIS--- 137
            K S  L S        +    N+ L  KE+ D I++ N   S+SS S  S S S +   
Sbjct: 108 SKHSFPLSSRDKLLDASLGKSVNKVLAGKEIRDTISKSNSVSSVSSCSSSSSSSSPNSTQ 167

Query: 138 ---EPKISNKKTGCGIEAIGVKQREVEWSRRSCYAFNSSVRLLMVSLGVTVMQGRVLGIL 197
                K+ NK T        +  +  +  R S  + NS++ LL+ SL VT+  G++  I 
Sbjct: 168 NQKRQKLQNKNTYSNHRESEMNPKHEQIDRGS--SSNSAIFLLLASLAVTIFWGKICAIF 227

Query: 198 ITSISVYFFAWMQMED 200
            TS+ +YF    Q  D
Sbjct: 228 FTSMWLYFLPHQQPAD 238

[Close]
BLAST of Csa6G121450 vs. NCBI nr
Match: gi|449444407|ref|XP_004139966.1| (PREDICTED: uncharacterized protein LOC101210838 [Cucumis sativus])

HSP 1 Score: 429.9 bits (1104), Expect = 2.7e-117
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 1 

Query: 1   MATVRHTKPTTTLAAYLDLEDQQTQSCPTCRCSTNSAISLRPKPALSRTARAIVFGTILI 60
           MATVRHTKPTTTLAAYLDLEDQQTQSCPTCRCSTNSAISLRPKPALSRTARAIVFGTILI
Sbjct: 1   MATVRHTKPTTTLAAYLDLEDQQTQSCPTCRCSTNSAISLRPKPALSRTARAIVFGTILI 60

Query: 61  KRVRERKIHRQPKSDGRKRSLSLDSVRVPVKENRELVKKELDGINQENREISLSSGSIQS 120
           KRVRERKIHRQPKSDGRKRSLSLDSVRVPVKENRELVKKELDGINQENREISLSSGSIQS
Sbjct: 61  KRVRERKIHRQPKSDGRKRSLSLDSVRVPVKENRELVKKELDGINQENREISLSSGSIQS 120

Query: 121 FSISISEPKISNKKTGCGIEAIGVKQREVEWSRRSCYAFNSSVRLLMVSLGVTVMQGRVL 180
           FSISISEPKISNKKTGCGIEAIGVKQREVEWSRRSCYAFNSSVRLLMVSLGVTVMQGRVL
Sbjct: 121 FSISISEPKISNKKTGCGIEAIGVKQREVEWSRRSCYAFNSSVRLLMVSLGVTVMQGRVL 180

Query: 181 GILITSISVYFFAWMQMEDCWLKKKATKCMEKRENRH 218
           GILITSISVYFFAWMQMEDCWLKKKATKCMEKRENRH
Sbjct: 181 GILITSISVYFFAWMQMEDCWLKKKATKCMEKRENRH 217

[Close]
BLAST of Csa6G121450 vs. NCBI nr
Match: gi|659094757|ref|XP_008448227.1| (PREDICTED: uncharacterized protein LOC103490482 [Cucumis melo])

HSP 1 Score: 386.3 bits (991), Expect = 3.4e-104
Identity = 199/217 (91.71%), Postives = 201/217 (92.63%), Query Frame = 1 

Query: 1   MATVRHTKPTTTLAAYLDLEDQQTQSCPTCRCSTNSAISLRPKPALSRTARAIVFGTILI 60
           M TVRHTKP TTLAA+LDLEDQQTQSCP CRCS NSAISL PKPALSRTARAIVFGTILI
Sbjct: 1   MGTVRHTKPPTTLAAFLDLEDQQTQSCPNCRCSRNSAISLPPKPALSRTARAIVFGTILI 60

Query: 61  KRVRERKIHRQPKSDGRKRSLSLDSVRVPVKENRELVKKELDGINQENREISLSSGSIQS 120
           KRVRERK HRQPK DGRKRSL LDSVRVPVKENRE VK+ELDGI QENREI LSSGSIQS
Sbjct: 61  KRVRERKTHRQPKYDGRKRSLLLDSVRVPVKENRESVKRELDGIYQENREIPLSSGSIQS 120

Query: 121 FSISISEPKISNKKTGCGIEAIGVKQREVEWSRRSCYAFNSSVRLLMVSLGVTVMQGRVL 180
           FSISISEPKISNKKTGCG EAIGVKQREVE SRRSCYAFNSSVRLLMVSLGVTVMQGRVL
Sbjct: 121 FSISISEPKISNKKTGCGNEAIGVKQREVERSRRSCYAFNSSVRLLMVSLGVTVMQGRVL 180

Query: 181 GILITSISVYFFAWMQMEDCWLKKKATKCMEKRENRH 218
           GILITSISVYFFAWMQMEDCWLK KATK ME RENRH
Sbjct: 181 GILITSISVYFFAWMQMEDCWLKNKATKFMENRENRH 217

[Close]
BLAST of Csa6G121450 vs. NCBI nr
Match: gi|694324381|ref|XP_009353215.1| (PREDICTED: uncharacterized protein LOC103944478 [Pyrus x bretschneideri])

HSP 1 Score: 77.4 bits (189), Expect = 3.4e-11
Identity = 60/171 (35.09%), Postives = 88/171 (51.46%), Query Frame = 1 

Query: 33  STNSAISLRPKPALSRTARAIVFGTILIKRVRERKIHRQPKSDGRKRSLSLDSVRVPVKE 92
           S NS +  RP    S+  +A+VF TIL K+ R+RK+ RQ  S G KR  SL S       
Sbjct: 65  SENSKMPPRPSRTFSKAVKAVVFETILAKKARDRKVCRQD-SFGSKRCFSLRSEASLNLG 124

Query: 93  NRELVKK-----ELDGINQENREISLSSGSIQSFSISISEPK-ISNKKTGCGIEAIGVKQ 152
             E VKK      +  ++  +R  S SS ++ S S S+SE K +S   +    +++   Q
Sbjct: 125 GDESVKKFEETKPISEMSLHSRSSSSSSSALSSSS-SVSESKRLSKTFSDPTKQSLRNPQ 184

Query: 153 REVEWSRRS---CYAFNSSVRLLMVSLGVTVMQGRVLGILITSISVYFFAW 195
                 + +   C  FNS    L++SL VTV  G+ + IL++SI +YFF W
Sbjct: 185 NPAAKPKNTEVVCSGFNSGTYFLLISLAVTVFWGKAIAILVSSIWLYFFPW 233

[Close]
BLAST of Csa6G121450 vs. NCBI nr
Match: gi|657975471|ref|XP_008379586.1| (PREDICTED: uncharacterized protein LOC103442563 [Malus domestica])

HSP 1 Score: 77.4 bits (189), Expect = 3.4e-11
Identity = 67/175 (38.29%), Postives = 86/175 (49.14%), Query Frame = 1 

Query: 33  STNSAISLRPKPALSRTARAIVFGTILIKRVRERKIHRQPKSDGRKRSLSLDSVRVPVKE 92
           S NS +S RP    S+  +A+VF TIL K+ R+RK+ RQ  S G KR  SL S       
Sbjct: 65  SENSKMSPRPSRTFSKAVKAVVFETILAKKARDRKVCRQD-SFGSKRCFSLRSEASLNLG 124

Query: 93  NRELVKKELDGINQENREISL------SSGSIQSFSISISEPKISNKKTGCGIE------ 152
             E VKK  + I   N E+SL      SS S  S S S+SE K  +K      +      
Sbjct: 125 GDESVKKFEETI--PNSEMSLHSRSSSSSSSALSSSSSVSESKRLSKTFSDPTKQSLRNP 184

Query: 153 ---AIGVKQREVEWSRRSCYAFNSSVRLLMVSLGVTVMQGRVLGILITSISVYFF 193
              A   K  EV      C  FNS    L++SL VTV  G+ + IL++SI +YFF
Sbjct: 185 QNPAAKPKNTEVR-----CSGFNSGTYFLLISLAVTVFWGKAIAILVSSIWLYFF 231

[Close]
BLAST of Csa6G121450 vs. NCBI nr
Match: gi|1009128008|ref|XP_015880996.1| (PREDICTED: uncharacterized protein At5g23160-like [Ziziphus jujuba])

HSP 1 Score: 77.0 bits (188), Expect = 4.5e-11
Identity = 68/206 (33.01%), Postives = 101/206 (49.03%), Query Frame = 1 

Query: 30  CRCSTNSAISLRP-KPALSRTARAIVFGTILIKRVRERKIHRQP----KSDGRKRSLSLD 89
           C  ++ ++I+L+P K + SR  +A+ F TIL KRVR+RK  R          R+RS   D
Sbjct: 62  CSMNSENSITLQPQKRSFSRVIKAVFFETILAKRVRDRKESRSNIMLLSKSSRQRSSDSD 121

Query: 90  SVRVPVKENRELVKKELDGINQENREISLSSG---SIQSFSISISEPKISNKKTGCGIEA 149
           S         EL+       N + +EI    G   S  S S S  EPKIS++ +   ++ 
Sbjct: 122 S--------DELMNLSPANSNFQFQEIETKMGLFHSSTSLSNSTPEPKISSRNS---VKQ 181

Query: 150 IGVKQR---------EVEWSRRSCYAFNSSVRLLMVSLGVTVMQGRVLGILITSISVYFF 209
              KQR         + E + + C   NS + LL++SL VTV+ GR+  IL TSI  YF 
Sbjct: 182 KLEKQRNHQHGEPETKSEETNKRCSVLNSGLYLLLISLTVTVLWGRICAILFTSIWFYFL 241

Query: 210 AWMQMED--CWLKKKATKCMEKRENR 217
           +    E+  C   +   K  E+RE++
Sbjct: 242 SCWSPENLRCRRTESVRKWPEERESK 256

The following BLAST results are available for this feature:
BLAST of Csa6G121450 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KE38_CUCSA1.9e-117100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G121450 PE=4 SV=1[more]
A0A061E4J7_THECC9.4e-0831.63Uncharacterized protein OS=Theobroma cacao GN=TCM_007861 PE=4 SV=1[more]
BLAST of Csa6G121450 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449444407|ref|XP_004139966.1|2.7e-117100.00PREDICTED: uncharacterized protein LOC101210838 [Cucumis sativus][more]
gi|659094757|ref|XP_008448227.1|3.4e-10491.71PREDICTED: uncharacterized protein LOC103490482 [Cucumis melo][more]
gi|694324381|ref|XP_009353215.1|3.4e-1135.09PREDICTED: uncharacterized protein LOC103944478 [Pyrus x bretschneideri][more]
gi|657975471|ref|XP_008379586.1|3.4e-1138.29PREDICTED: uncharacterized protein LOC103442563 [Malus domestica][more]
gi|1009128008|ref|XP_015880996.1|4.5e-1133.01PREDICTED: uncharacterized protein At5g23160-like [Ziziphus jujuba][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa6G121450.1Csa6G121450.1mRNA