MELO3C013523 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C013523
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionCoffea canephora DH200=94 genomic scaffold, scaffold_5481
Locationchr11 : 15789494 .. 15789762 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AACAAAGCTCCGAGGACGACACCATGGTTTTCTTTTGCTTTATGGTGGATCAGAAGCGGAAGGTGCGGCGGAGTAGGCCGGCGCCTGGAATTTGCTCCAGATGCGGCGGAGGAGCCAGCGTTGCCGATATGAAAACCGCTACGAGATTCTGTCATGTTCCCTTTTATTGGAAATCTTGGAGAGCCCTCATCTGTACCTTTTGTGGATCTGTTCTTCGATCTTATCGCTAATTTATTTATTTCCTTCTAATTTTTCAATGTTTTATTATT

mRNA sequence

AACAAAGCTCCGAGGACGACACCATGGTTTTCTTTTGCTTTATGGTGGATCAGAAGCGGAAGGTGCGGCGGAGTAGGCCGGCGCCTGGAATTTGCTCCAGATGCGGCGGAGGAGCCAGCGTTGCCGATATGAAAACCGCTACGAGATTCTGTCATGTTCCCTTTTATTGGAAATCTTGGAGAGCCCTCATCTGTACCTTTTGTGGATCTGTTCTTCGATCTTATCGCTAATTTATTTATTTCCTTCTAATTTTTCAATGTTTTATTATT

Coding sequence (CDS)

ATGGTTTTCTTTTGCTTTATGGTGGATCAGAAGCGGAAGGTGCGGCGGAGTAGGCCGGCGCCTGGAATTTGCTCCAGATGCGGCGGAGGAGCCAGCGTTGCCGATATGAAAACCGCTACGAGATTCTGTCATGTTCCCTTTTATTGGAAATCTTGGAGAGCCCTCATCTGTACCTTTTGTGGATCTGTTCTTCGATCTTATCGCTAA

Protein sequence

MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFCGSVLRSYR*
Homology
[Close]
BLAST of MELO3C013523 vs. TrEMBL
Match: M5WWH0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023818mg PE=4 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 8.0e-30
Identity = 59/68 (86.76%), Postives = 66/68 (97.06%), Query Frame = 1 

Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60
          MV FCF+VDQKR+VRRS+PA GICSRCGGGASVADMKTATRFC+VPFYWKSWRA+ICTFC
Sbjct: 1  MVVFCFLVDQKRQVRRSKPAAGICSRCGGGASVADMKTATRFCYVPFYWKSWRAIICTFC 60

Query: 61 GSVLRSYR 69
          G++LRSYR
Sbjct: 61 GAILRSYR 68

[Close]
BLAST of MELO3C013523 vs. TrEMBL
Match: W9R852_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022171 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 2.3e-29
Identity = 59/68 (86.76%), Postives = 64/68 (94.12%), Query Frame = 1 

Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60
          MV FCF+VDQKRKVRRS+PA G CSRCGGGASVADMKTATRFC+VPFYWKSWRA+ICTFC
Sbjct: 1  MVVFCFLVDQKRKVRRSKPAAGTCSRCGGGASVADMKTATRFCYVPFYWKSWRAIICTFC 60

Query: 61 GSVLRSYR 69
          G+ LRSYR
Sbjct: 61 GATLRSYR 68

[Close]
BLAST of MELO3C013523 vs. TrEMBL
Match: A0A068VM26_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00006999001 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.0e-29
Identity = 58/67 (86.57%), Postives = 64/67 (95.52%), Query Frame = 1 

Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60
          MV FCF+VDQ RKVRRS+PA GICSRCGGGASVADMKTATRFCHVPFYWK+WRA+ICTFC
Sbjct: 1  MVCFCFLVDQTRKVRRSKPAAGICSRCGGGASVADMKTATRFCHVPFYWKTWRAIICTFC 60

Query: 61 GSVLRSY 68
          G++LRSY
Sbjct: 61 GAILRSY 67

[Close]
BLAST of MELO3C013523 vs. TrEMBL
Match: A0A0R0H7S8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G201800 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 3.0e-29
Identity = 57/68 (83.82%), Postives = 67/68 (98.53%), Query Frame = 1 

Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60
          MVFFCF+VDQ+R+V+RS+PA GICSRCGGGASVADMKTATRFC+VPFYWKSWRA++CTFC
Sbjct: 1  MVFFCFLVDQQRQVQRSKPAAGICSRCGGGASVADMKTATRFCYVPFYWKSWRAIVCTFC 60

Query: 61 GSVLRSYR 69
          G+VLRSY+
Sbjct: 61 GAVLRSYQ 68

[Close]
BLAST of MELO3C013523 vs. TrEMBL
Match: A0A022QES8_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a017542mg PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 5.2e-29
Identity = 58/68 (85.29%), Postives = 65/68 (95.59%), Query Frame = 1 

Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60
          MV FCF+VDQ RKVR+S+PA GICSRCGGGASVADMKTATRFC+VPFYWK+WRA+ICTFC
Sbjct: 1  MVCFCFLVDQTRKVRQSKPAAGICSRCGGGASVADMKTATRFCYVPFYWKTWRAIICTFC 60

Query: 61 GSVLRSYR 69
          GS+LRSYR
Sbjct: 61 GSILRSYR 68

[Close]
BLAST of MELO3C013523 vs. TAIR10
Match: AT1G52855.1 (AT1G52855.1 unknown protein)

HSP 1 Score: 117.9 bits (294), Expect = 2.5e-27
Identity = 49/68 (72.06%), Postives = 58/68 (85.29%), Query Frame = 1 

Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60
          MV FCF+VDQ RKV+RS+PA G CSRCG  AS+ADMKT+TRFC +P YW+SWRA++C+FC
Sbjct: 1  MVCFCFLVDQTRKVKRSKPAAGTCSRCGHCASIADMKTSTRFCFIPIYWRSWRAVVCSFC 60

Query: 61 GSVLRSYR 69
          GSVL+SYR
Sbjct: 61 GSVLKSYR 68

[Close]
BLAST of MELO3C013523 vs. TAIR10
Match: AT3G15534.1 (AT3G15534.1 unknown protein)

HSP 1 Score: 114.0 bits (284), Expect = 3.7e-26
Identity = 49/68 (72.06%), Postives = 57/68 (83.82%), Query Frame = 1 

Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60
          MV FCF+VDQKRKV+ S+PA G CSRCG GA VADMKT+TRFC +P Y +SWRA++C+FC
Sbjct: 1  MVCFCFLVDQKRKVKGSKPAAGTCSRCGRGARVADMKTSTRFCLIPIYCRSWRAIVCSFC 60

Query: 61 GSVLRSYR 69
          GSVL+SYR
Sbjct: 61 GSVLKSYR 68

[Close]
BLAST of MELO3C013523 vs. TAIR10
Match: AT2G20835.1 (AT2G20835.1 unknown protein)

HSP 1 Score: 107.8 bits (268), Expect = 2.6e-24
Identity = 44/67 (65.67%), Postives = 55/67 (82.09%), Query Frame = 1 

Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60
          M  FCF+VDQ++KVR  +PA G+CSRCGGGA VADM+T+TRFC VPFY K+W+A++C  C
Sbjct: 1  MAIFCFLVDQRKKVRGRKPAAGLCSRCGGGAVVADMRTSTRFCGVPFYRKAWKAIVCHIC 60

Query: 61 GSVLRSY 68
          G+VL+SY
Sbjct: 61 GAVLKSY 67

[Close]
BLAST of MELO3C013523 vs. NCBI nr
Match: gi|659094706|ref|XP_008448201.1| (PREDICTED: uncharacterized protein LOC103490465 [Cucumis melo])

HSP 1 Score: 151.4 bits (381), Expect = 5.9e-34
Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 1 

Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60
          MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC
Sbjct: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60

Query: 61 GSVLRSYR 69
          GSVLRSYR
Sbjct: 61 GSVLRSYR 68

[Close]
BLAST of MELO3C013523 vs. NCBI nr
Match: gi|449444390|ref|XP_004139958.1| (PREDICTED: uncharacterized protein LOC101208066 [Cucumis sativus])

HSP 1 Score: 148.3 bits (373), Expect = 5.0e-33
Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 1 

Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60
          MVFFCFMVDQKRKVRRSRPAPGIC+RCGGGASVADMKTA RFCHVPFYWKSWRALICTFC
Sbjct: 1  MVFFCFMVDQKRKVRRSRPAPGICARCGGGASVADMKTAVRFCHVPFYWKSWRALICTFC 60

Query: 61 GSVLRSYR 69
          GSVLRSYR
Sbjct: 61 GSVLRSYR 68

[Close]
BLAST of MELO3C013523 vs. NCBI nr
Match: gi|595959141|ref|XP_007216790.1| (hypothetical protein PRUPE_ppa023818mg [Prunus persica])

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-29
Identity = 59/68 (86.76%), Postives = 66/68 (97.06%), Query Frame = 1 

Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60
          MV FCF+VDQKR+VRRS+PA GICSRCGGGASVADMKTATRFC+VPFYWKSWRA+ICTFC
Sbjct: 1  MVVFCFLVDQKRQVRRSKPAAGICSRCGGGASVADMKTATRFCYVPFYWKSWRAIICTFC 60

Query: 61 GSVLRSYR 69
          G++LRSYR
Sbjct: 61 GAILRSYR 68

[Close]
BLAST of MELO3C013523 vs. NCBI nr
Match: gi|747076572|ref|XP_011085361.1| (PREDICTED: uncharacterized protein LOC105167371 [Sesamum indicum])

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-29
Identity = 58/68 (85.29%), Postives = 66/68 (97.06%), Query Frame = 1 

Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60
          MVFFCF+VDQ RKVR+S+PA GICSRCGGGASVADMKTATRFC+VPFYWK+WRA+ICTFC
Sbjct: 1  MVFFCFLVDQTRKVRQSKPAAGICSRCGGGASVADMKTATRFCYVPFYWKNWRAIICTFC 60

Query: 61 GSVLRSYR 69
          G++LRSYR
Sbjct: 61 GAILRSYR 68

[Close]
BLAST of MELO3C013523 vs. NCBI nr
Match: gi|645248303|ref|XP_008230234.1| (PREDICTED: uncharacterized protein LOC103329534 [Prunus mume])

HSP 1 Score: 135.6 bits (340), Expect = 3.3e-29
Identity = 58/68 (85.29%), Postives = 66/68 (97.06%), Query Frame = 1 

Query: 1  MVFFCFMVDQKRKVRRSRPAPGICSRCGGGASVADMKTATRFCHVPFYWKSWRALICTFC 60
          MV FCF+VDQKR+VRRS+PA GICSRCGGGASVADM+TATRFC+VPFYWKSWRA+ICTFC
Sbjct: 1  MVVFCFLVDQKRQVRRSKPAAGICSRCGGGASVADMQTATRFCYVPFYWKSWRAIICTFC 60

Query: 61 GSVLRSYR 69
          G++LRSYR
Sbjct: 61 GAILRSYR 68

The following BLAST results are available for this feature:
BLAST of MELO3C013523 vs. TrEMBL
Match NameE-valueIdentityDescription
M5WWH0_PRUPE8.0e-3086.76Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa023818mg PE=4 SV=1[more]
W9R852_9ROSA2.3e-2986.76Uncharacterized protein OS=Morus notabilis GN=L484_022171 PE=4 SV=1[more]
A0A068VM26_COFCA3.0e-2986.57Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00006999001 PE=4 SV=1[more]
A0A0R0H7S8_SOYBN3.0e-2983.82Uncharacterized protein OS=Glycine max GN=GLYMA_12G201800 PE=4 SV=1[more]
A0A022QES8_ERYGU5.2e-2985.29Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a017542mg PE=4 SV=1[more]
BLAST of MELO3C013523 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G52855.12.5e-2772.06 unknown protein[more]
AT3G15534.13.7e-2672.06 unknown protein[more]
AT2G20835.12.6e-2465.67 unknown protein[more]
BLAST of MELO3C013523 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659094706|ref|XP_008448201.1|5.9e-34100.00PREDICTED: uncharacterized protein LOC103490465 [Cucumis melo][more]
gi|449444390|ref|XP_004139958.1|5.0e-3397.06PREDICTED: uncharacterized protein LOC101208066 [Cucumis sativus][more]
gi|595959141|ref|XP_007216790.1|1.2e-2986.76hypothetical protein PRUPE_ppa023818mg [Prunus persica][more]
gi|747076572|ref|XP_011085361.1|2.0e-2985.29PREDICTED: uncharacterized protein LOC105167371 [Sesamum indicum][more]
gi|645248303|ref|XP_008230234.1|3.3e-2985.29PREDICTED: uncharacterized protein LOC103329534 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013523T1MELO3C013523T1mRNA


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33320FAMILY NOT NAMEDcoord: 1..68
score: 6.2
NoneNo IPR availablePANTHERPTHR33320:SF2SUBFAMILY NOT NAMEDcoord: 1..68
score: 6.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C013523Cla013583Watermelon (97103) v1mewmB128
MELO3C013523ClCG02G017420Watermelon (Charleston Gray)mewcgB110
MELO3C013523Cla97C02G043140Watermelon (97103) v2mewmbB112
MELO3C013523Cucsa.119500Cucumber (Gy14) v1cgymeB178
MELO3C013523CmoCh20G005840Cucurbita moschata (Rifu)cmomeB490
MELO3C013523Cp4.1LG16g04740Cucurbita pepo (Zucchini)cpemeB266
MELO3C013523CsGy6G010180Cucumber (Gy14) v2cgybmeB388
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C013523Cucumber (Chinese Long) v3cucmeB431
MELO3C013523Cucumber (Chinese Long) v3cucmeB453
MELO3C013523Wax gourdmewgoB126
MELO3C013523Cucumber (Gy14) v1cgymeB179
MELO3C013523Wild cucumber (PI 183967)cpimeB419
MELO3C013523Wild cucumber (PI 183967)cpimeB442
MELO3C013523Cucumber (Chinese Long) v2cumeB425
MELO3C013523Cucumber (Chinese Long) v2cumeB451
MELO3C013523Bottle gourd (USVL1VR-Ls)lsimeB051
MELO3C013523Cucumber (Gy14) v2cgybmeB367