MELO3C013491 (gene) Melon (DHL92) v3.5.1
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.GATGAACATCCCAGCTCCATTCCGATTGCCTCTGCCCACCCCACCCCTCCCGCCTTCCACTCCTGCCCCACCATCACCATCATTAACGCTGCCACCTCTTCCTCCTCCTGCCACTTCAAGGTCTCAAGTAACAAATATGCCCAGTGATGAGTCAGAAATGGAGTCCTCAGAAGAGGTAACTTGCCTAGACCTGGTGAAACTTTTTCCTTTTTCTAGCTTGAATGAAATTCTGTCGTCAACTGGAGCCCAAAAGTCTGCTCTGACTAATACTAAAGGTGTATCCAAATAATGGTATGGCCATTTTTGTTTGGAACCTTCCCATATGAATCGGCTCGATTAATTTTGAGCTATGGTGTTGGGGATAACTCTTTAGTCTTTAAAGTTAAGACCTTGGCAACGGTTTTGCAAGCCTTTAGTAGTAGAAAGGACCTTTAGCAACAAATTTGTATAAACTTGTAGTGAGGTTATTTGGCCGACAGTCAACCCCTTTGAAGATCCTTTTTGTTTTGTTTTTGTGGAATCAGACAAAGCTAGGTCTCATTACACAAGAATTAAGGATTCCATTCTAAAAAAATCTTGGGACACCTCCACTCTGTCCCCTTTGAAGATGTATCAGAAGAAATAAAGCTACATCTCGGTGTAATTATTCACATTTTTTTATGTCCTACATTTTCTCTACACTCTTATCCAATTGGAGAACATGAGAAGTTTATTGTGAATCATTTGGATCGGACTCTCCCATTTTTATAAACTTCATGCATAAATGAAACTTGTTCTTAAAAAATTATTTTTCATAAATTTCCCCGCATATCCATAGGACCCTGTAAATCTGGTAATTTTTGTTGTTGTGGTTCAAAATTATACGAGCATGTCAGCAAAATTTATTTCTTTTATTCCATATGGACAATGATGTCAATCTTGTTGATGTTTTTATCATCTACAATTTTTAGGTGCATCATGTCCGTTTTTTTTACGTCAATAAATGCTTTCATGTCAATAAATGTTCTTTCCTTTGTTTTTGTGTTTTTAATTCTCCTGTATGGTTTTATTTTATATTCTATTCATTTCTTGTTCTAGGCTGTTTCTAGCTGAGATGAGGTATAATAATGTACTCCCATTTTTTCTTGGAACTTTCTGATTAATTGGATTTAAGTTTGCATCAGGATGTTGAAGGAAAATATAATTCAAGCGGAGTTTCAAAAACTGCAAAATCAGGATACAAGCGTCCTAGGTGTGAAACCATTGTAGGCCCTGGGATAGATAAAGATGTGGCTCATGAGGCTGTTGGGGTGAAACCTTCCACATTGGTTCCAAAAGAGATTCCTATGATAAAAAAGAAGAACCCCGTGATTCAGGTTGCGTTTATCATAAAACAGAACTAATTGGCATATGATCTTATTTATATGACTCCTCCAGATTCCCTTGTTTAATCGTTGCAGATTAGAATTGCCCCTAAAGTG GATGAACATCCCAGCTCCATTCCGATTGCCTCTGCCCACCCCACCCCTCCCGCCTTCCACTCCTGCCCCACCATCACCATCATTAACGCTGCCACCTCTTCCTCCTCCTGCCACTTCAAGGTCTCAAGTAACAAATATGCCCAGTGATGAGTCAGAAATGGAGTCCTCAGAAGAGGATGTTGAAGGAAAATATAATTCAAGCGGAGTTTCAAAAACTGCAAAATCAGGATACAAGCGTCCTAGGTGTGAAACCATTGTAGGCCCTGGGATAGATAAAGATGTGGCTCATGAGGCTGTTGGGGTGAAACCTTCCACATTGGTTCCAAAAGAGATTCCTATGATAAAAAAGAAGAACCCCGTGATTCAGGTTGCGTTTATCATAAAACAGAACTAATTGGCATATGATCTTATTTATATGACTCCTCCAGATTCCCTTGTTTAATCGTTGCAGATTAGAATTGCCCCTAAAGTG ATGAACATCCCAGCTCCATTCCGATTGCCTCTGCCCACCCCACCCCTCCCGCCTTCCACTCCTGCCCCACCATCACCATCATTAACGCTGCCACCTCTTCCTCCTCCTGCCACTTCAAGGTCTCAAGTAACAAATATGCCCAGTGATGAGTCAGAAATGGAGTCCTCAGAAGAGGATGTTGAAGGAAAATATAATTCAAGCGGAGTTTCAAAAACTGCAAAATCAGGATACAAGCGTCCTAGGTGTGAAACCATTGTAGGCCCTGGGATAGATAAAGATGTGGCTCATGAGGCTGTTGGGGTGAAACCTTCCACATTGGTTCCAAAAGAGATTCCTATGATAAAAAAGAAGAACCCCGTGATTCAGGTTGCGTTTATCATAAAACAGAACTAA MNIPAPFRLPLPTPPLPPSTPAPPSPSLTLPPLPPPATSRSQVTNMPSDESEMESSEEDVEGKYNSSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMIKKKNPVIQVAFIIKQN*
BLAST of MELO3C013491 vs. Swiss-Prot
Match: U1165_ARATH (U11/U12 small nuclear ribonucleoprotein 65 kDa protein OS=Arabidopsis thaliana GN=SNRNP65 PE=1 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.0e-18 Identity = 56/128 (43.75%), Postives = 68/128 (53.12%), Query Frame = 1
BLAST of MELO3C013491 vs. TrEMBL
Match: A0A0A0KCT1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G118290 PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 2.3e-62 Identity = 118/123 (95.93%), Postives = 120/123 (97.56%), Query Frame = 1
BLAST of MELO3C013491 vs. TrEMBL
Match: A0A059DGY1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A02076 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 2.9e-36 Identity = 81/128 (63.28%), Postives = 96/128 (75.00%), Query Frame = 1
BLAST of MELO3C013491 vs. TrEMBL
Match: B9SHJ5_RICCO (RNA binding protein, putative OS=Ricinus communis GN=RCOM_1122320 PE=4 SV=1) HSP 1 Score: 149.4 bits (376), Expect = 3.0e-33 Identity = 74/123 (60.16%), Postives = 91/123 (73.98%), Query Frame = 1
BLAST of MELO3C013491 vs. TrEMBL
Match: B9I5U9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s05120g PE=4 SV=2) HSP 1 Score: 131.0 bits (328), Expect = 1.1e-27 Identity = 69/125 (55.20%), Postives = 85/125 (68.00%), Query Frame = 1
BLAST of MELO3C013491 vs. TAIR10
Match: AT1G09230.1 (AT1G09230.1 RNA-binding (RRM/RBD/RNP motifs) family protein) HSP 1 Score: 94.4 bits (233), Expect = 5.7e-20 Identity = 56/128 (43.75%), Postives = 68/128 (53.12%), Query Frame = 1
BLAST of MELO3C013491 vs. NCBI nr
Match: gi|659094675|ref|XP_008448186.1| (PREDICTED: RNA-binding protein 40 isoform X8 [Cucumis melo]) HSP 1 Score: 253.1 bits (645), Expect = 2.7e-64 Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 1
BLAST of MELO3C013491 vs. NCBI nr
Match: gi|659094673|ref|XP_008448185.1| (PREDICTED: RNA-binding protein 40 isoform X7 [Cucumis melo]) HSP 1 Score: 253.1 bits (645), Expect = 2.7e-64 Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 1
BLAST of MELO3C013491 vs. NCBI nr
Match: gi|659094671|ref|XP_008448183.1| (PREDICTED: RNA-binding protein 40 isoform X6 [Cucumis melo]) HSP 1 Score: 253.1 bits (645), Expect = 2.7e-64 Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 1
BLAST of MELO3C013491 vs. NCBI nr
Match: gi|659094651|ref|XP_008448172.1| (PREDICTED: RNA-binding protein 40 isoform X1 [Cucumis melo]) HSP 1 Score: 253.1 bits (645), Expect = 2.7e-64 Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 1
BLAST of MELO3C013491 vs. NCBI nr
Match: gi|659094669|ref|XP_008448182.1| (PREDICTED: RNA-binding protein 40 isoform X5 [Cucumis melo]) HSP 1 Score: 253.1 bits (645), Expect = 2.7e-64 Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |