MELO3C013275.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C013275.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionEukaryotic translation initiation factor 3 subunit A, putative
Locationchr01 : 15817187 .. 15818216 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGTCAACTTGAAACTGCTTTGGCTGTTCTACAATTCTTAAGCTTAGGCTTTTGTAAAAAAAGATGGATTCCTTTGCTGCAAACTCAAAGAAATCGTTCCACATTCGTTCGAACAGTTTGCCTTCAAAGCCGCATCCAGTTGTGGATGAAATTAATGAAAATCTCCGCAGATTGAAGGCCTCTGAAGAAGCCACTTCTTCATCTTCTACTTTGTGCCAAAAACTTGATGGTCTTCAAGATTTACATGATTCCATTGATAAGTTGCTTCTTTTGCCGCTCACACATCAAGCTCTTGTTGACAACAAATCAGTTGATGACTTGTTAGAAGGATCTCTCAAGATCCTTGATGTGTGTGCTTTGGCTAAGGATATTTTATCACAAATGAAAGAATCTGCACACGAACTTGAGTCGGCATTGCGCAGAAGAAAAGATGACATGATTGATGTTCAGAAGTATTTGAACTCAAGGAAGATGGTAAAGAAGGCAATCCACAAGGCCTTGAAGGGAATGGAAAAAACAAGTTCCCAAAAAAGTGATGAAAGTTTAGAAATTGTTAGCTTGCTAAAGGAGGCAGAAACTGTTACATATAACAGCATTCAATCCCTATTGTTATTTGTAGCAGGACCAAAGTCTCCATCAAAGATGAGCAGATGGTCTCTAGTTTCCAAGCTGATGCAACCTAAGAAAGTAGCCAACAAGGAGGATGGTGCATATGGAAATGAAGTAGAGATGGTAGATGCTTCATTGTATTCAATCACCGGTCACAAATCTGATTTCTTTGTGCAAGTTGAAGAAGTGCAGAACTCGTTGAGAAAATTGGAGTCGTGCATTCGTGACCTTGAAGAAGATCTCGAAAATCTATATCGTTGTCTTATAAAGAATAGAGTCTCGTTTCTTAACATCCTAAATCACTTCCTAAATCACTGAGGATGAAAACTTAGATAGTTATATTCGATTCCAGTGGAATCCATTTTTGCCAAGTGTAAAGACCACAATACATATATAATAGATACAAATACATTTCACCAC

mRNA sequence

GAAGTCAACTTGAAACTGCTTTGGCTGTTCTACAATTCTTAAGCTTAGGCTTTTGTAAAAAAAGATGGATTCCTTTGCTGCAAACTCAAAGAAATCGTTCCACATTCGTTCGAACAGTTTGCCTTCAAAGCCGCATCCAGTTGTGGATGAAATTAATGAAAATCTCCGCAGATTGAAGGCCTCTGAAGAAGCCACTTCTTCATCTTCTACTTTGTGCCAAAAACTTGATGGTCTTCAAGATTTACATGATTCCATTGATAAGTTGCTTCTTTTGCCGCTCACACATCAAGCTCTTGTTGACAACAAATCAGTTGATGACTTGTTAGAAGGATCTCTCAAGATCCTTGATGTGTGTGCTTTGGCTAAGGATATTTTATCACAAATGAAAGAATCTGCACACGAACTTGAGTCGGCATTGCGCAGAAGAAAAGATGACATGATTGATGTTCAGAAGTATTTGAACTCAAGGAAGATGGTAAAGAAGGCAATCCACAAGGCCTTGAAGGGAATGGAAAAAACAAGTTCCCAAAAAAGTGATGAAAGTTTAGAAATTGTTAGCTTGCTAAAGGAGGCAGAAACTGTTACATATAACAGCATTCAATCCCTATTGTTATTTGTAGCAGGACCAAAGTCTCCATCAAAGATGAGCAGATGGTCTCTAGTTTCCAAGCTGATGCAACCTAAGAAAGTAGCCAACAAGGAGGATGGTGCATATGGAAATGAAGTAGAGATGGTAGATGCTTCATTGTATTCAATCACCGGTCACAAATCTGATTTCTTTGTGCAAGTTGAAGAAGTGCAGAACTCGTTGAGAAAATTGGAGTCGTGCATTCGTGACCTTGAAGAAGATCTCGAAAATCTATATCGTTGTCTTATAAAGAATAGAGTCTCGTTTCTTAACATCCTAAATCACTTCCTAAATCACTGAGGATGAAAACTTAGATAGTTATATTCGATTCCAGTGGAATCCATTTTTGCCAAGTGTAAAGACCACAATACATATATAATAGATACAAATACATTTCACCAC

Coding sequence (CDS)

ATGGATTCCTTTGCTGCAAACTCAAAGAAATCGTTCCACATTCGTTCGAACAGTTTGCCTTCAAAGCCGCATCCAGTTGTGGATGAAATTAATGAAAATCTCCGCAGATTGAAGGCCTCTGAAGAAGCCACTTCTTCATCTTCTACTTTGTGCCAAAAACTTGATGGTCTTCAAGATTTACATGATTCCATTGATAAGTTGCTTCTTTTGCCGCTCACACATCAAGCTCTTGTTGACAACAAATCAGTTGATGACTTGTTAGAAGGATCTCTCAAGATCCTTGATGTGTGTGCTTTGGCTAAGGATATTTTATCACAAATGAAAGAATCTGCACACGAACTTGAGTCGGCATTGCGCAGAAGAAAAGATGACATGATTGATGTTCAGAAGTATTTGAACTCAAGGAAGATGGTAAAGAAGGCAATCCACAAGGCCTTGAAGGGAATGGAAAAAACAAGTTCCCAAAAAAGTGATGAAAGTTTAGAAATTGTTAGCTTGCTAAAGGAGGCAGAAACTGTTACATATAACAGCATTCAATCCCTATTGTTATTTGTAGCAGGACCAAAGTCTCCATCAAAGATGAGCAGATGGTCTCTAGTTTCCAAGCTGATGCAACCTAAGAAAGTAGCCAACAAGGAGGATGGTGCATATGGAAATGAAGTAGAGATGGTAGATGCTTCATTGTATTCAATCACCGGTCACAAATCTGATTTCTTTGTGCAAGTTGAAGAAGTGCAGAACTCGTTGAGAAAATTGGAGTCGTGCATTCGTGACCTTGAAGAAGATCTCGAAAATCTATATCGTTGTCTTATAAAGAATAGAGTCTCGTTTCTTAACATCCTAAATCACTTCCTAAATCACTGA

Protein sequence

MDSFAANSKKSFHIRSNSLPSKPHPVVDEINENLRRLKASEEATSSSSTLCQKLDGLQDLHDSIDKLLLLPLTHQALVDNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRRRKDDMIDVQKYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSIQSLLLFVAGPKSPSKMSRWSLVSKLMQPKKVANKEDGAYGNEVEMVDASLYSITGHKSDFFVQVEEVQNSLRKLESCIRDLEEDLENLYRCLIKNRVSFLNILNHFLNH
BLAST of MELO3C013275.2 vs. NCBI nr
Match: XP_008448107.1 (PREDICTED: uncharacterized protein LOC103490394 [Cucumis melo])

HSP 1 Score: 541.6 bits (1394), Expect = 1.6e-150
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0

Query: 1   MDSFAANSKKSFHIRSNSLPSKPHPVVDEINENLRRLKASEEATSSSSTLCQKLDGLQDL 60
           MDSFAANSKKSFHIRSNSLPSKPHPVVDEINENLRRLKASEEATSSSSTLCQKLDGLQDL
Sbjct: 1   MDSFAANSKKSFHIRSNSLPSKPHPVVDEINENLRRLKASEEATSSSSTLCQKLDGLQDL 60

Query: 61  HDSIDKLLLLPLTHQALVDNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRR 120
           HDSIDKLLLLPLTHQALVDNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRR
Sbjct: 61  HDSIDKLLLLPLTHQALVDNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRR 120

Query: 121 RKDDMIDVQKYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSIQS 180
           RKDDMIDVQKYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSIQS
Sbjct: 121 RKDDMIDVQKYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSIQS 180

Query: 181 LLLFVAGPKSPSKMSRWSLVSKLMQPKKVANKEDGAYGNEVEMVDASLYSITGHKSDFFV 240
           LLLFVAGPKSPSKMSRWSLVSKLMQPKKVANKEDGAYGNEVEMVDASLYSITGHKSDFFV
Sbjct: 181 LLLFVAGPKSPSKMSRWSLVSKLMQPKKVANKEDGAYGNEVEMVDASLYSITGHKSDFFV 240

Query: 241 QVEEVQNSLRKLESCIRDLEEDLENLYRCLIKNRVSFLNILNHFLNH 288
           QVEEVQNSLRKLESCIRDLEEDLENLYRCLIKNRVSFLNILNHFLNH
Sbjct: 241 QVEEVQNSLRKLESCIRDLEEDLENLYRCLIKNRVSFLNILNHFLNH 287

BLAST of MELO3C013275.2 vs. NCBI nr
Match: XP_016900443.1 (PREDICTED: uncharacterized protein LOC107990906 [Cucumis melo])

HSP 1 Score: 457.6 bits (1176), Expect = 3.1e-125
Identity = 243/283 (85.87%), Postives = 261/283 (92.23%), Query Frame = 0

Query: 1   MDSFAANSKKSFHIRSNSLPSKPHPVVDEINENLRRLKASEEATSSSSTLCQKLDGLQDL 60
           MDSFAANSKKSFH+RSNSLPSKPHPVVDE+NENL RL+ASEEATSSSS+LCQKLDGLQDL
Sbjct: 1   MDSFAANSKKSFHVRSNSLPSKPHPVVDEVNENLCRLRASEEATSSSSSLCQKLDGLQDL 60

Query: 61  HDSIDKLLLLPLTHQALVDNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRR 120
            DSIDKLLLLPLTHQALVDNK VD+LLEGSLKILDVCALAKD+LSQMKESAHELESALRR
Sbjct: 61  QDSIDKLLLLPLTHQALVDNKLVDELLEGSLKILDVCALAKDVLSQMKESAHELESALRR 120

Query: 121 RKDDMIDVQKYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSIQS 180
           RKDD IDVQKYLNSRKMVKKAIH  LK M+KT+ QKSDES EIVSLLKEAE+V YNSI+S
Sbjct: 121 RKDDKIDVQKYLNSRKMVKKAIHMTLKEMKKTNFQKSDESSEIVSLLKEAESVAYNSIES 180

Query: 181 LLLFVAGPKSPSKMSRWSLVSKLMQPKKVANKEDGAYGNEVEMVDASLYSITGHKSDFFV 240
           LLLFVAGPK PSKMSRWSLVSK +QPKKV +K++   GNEVEMVD +LYSIT HKSDF V
Sbjct: 181 LLLFVAGPKFPSKMSRWSLVSKFIQPKKVVSKDEDTNGNEVEMVDVALYSITHHKSDFHV 240

Query: 241 QVEEVQNSLRKLESCIRDLEEDLENLYRCLIKNRVSFLNILNH 284
           QVE+VQNSLRKLESCI D EEDLE+LYR L+KNRVSFLNILNH
Sbjct: 241 QVEDVQNSLRKLESCICDFEEDLESLYRRLVKNRVSFLNILNH 283

BLAST of MELO3C013275.2 vs. NCBI nr
Match: XP_004144940.2 (PREDICTED: uncharacterized protein LOC101211103 [Cucumis sativus] >KGN43318.1 hypothetical protein Csa_7G023920 [Cucumis sativus])

HSP 1 Score: 450.7 bits (1158), Expect = 3.8e-123
Identity = 238/283 (84.10%), Postives = 259/283 (91.52%), Query Frame = 0

Query: 1   MDSFAANSKKSFHIRSNSLPSKPHPVVDEINENLRRLKASEEATSSSSTLCQKLDGLQDL 60
           MDSF+ NSKKSFH+RSNSLPSKPHPVVDE++E+L RLKASEEATSSSS+LCQKLDGLQDL
Sbjct: 1   MDSFSVNSKKSFHVRSNSLPSKPHPVVDEVSEHLCRLKASEEATSSSSSLCQKLDGLQDL 60

Query: 61  HDSIDKLLLLPLTHQALVDNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRR 120
           HD IDKLLLLPLTHQAL+DNKSVDDLLEGSLKILDVCALAKD+LSQMKESAHELESALRR
Sbjct: 61  HDCIDKLLLLPLTHQALIDNKSVDDLLEGSLKILDVCALAKDVLSQMKESAHELESALRR 120

Query: 121 RKDDMIDVQKYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSIQS 180
           RKD M+D+QKYLNSRKMVKKAIH  LKGM+KT+ QKSDES EIVSLLKEAETVTYNSI+S
Sbjct: 121 RKDGMVDIQKYLNSRKMVKKAIHMTLKGMKKTNFQKSDESSEIVSLLKEAETVTYNSIES 180

Query: 181 LLLFVAGPKSPSKMSRWSLVSKLMQPKKVANKEDGAYGNEVEMVDASLYSITGHKSDFFV 240
           LLLFVAGPK PSKMS+WSLVS LMQPK+VA K+D    NEVEMVDA+L SIT  KSD F 
Sbjct: 181 LLLFVAGPKLPSKMSKWSLVSMLMQPKRVACKDDSTDANEVEMVDAALNSITNRKSDCFA 240

Query: 241 QVEEVQNSLRKLESCIRDLEEDLENLYRCLIKNRVSFLNILNH 284
           Q E+VQNSLRKLE CI D+EEDLE+LYR L+KNRVSFLNILNH
Sbjct: 241 QGEDVQNSLRKLELCIHDIEEDLESLYRRLVKNRVSFLNILNH 283

BLAST of MELO3C013275.2 vs. NCBI nr
Match: XP_016900444.1 (PREDICTED: uncharacterized protein LOC103490230 [Cucumis melo])

HSP 1 Score: 447.6 bits (1150), Expect = 3.2e-122
Identity = 236/283 (83.39%), Postives = 258/283 (91.17%), Query Frame = 0

Query: 1   MDSFAANSKKSFHIRSNSLPSKPHPVVDEINENLRRLKASEEATSSSSTLCQKLDGLQDL 60
           MDS  ANSKKSFH+RSNSLPSKPHPVVDE++ENL RL+ASEE  SSSS LCQKLDGLQDL
Sbjct: 1   MDSLPANSKKSFHVRSNSLPSKPHPVVDEVDENLCRLRASEEVASSSS-LCQKLDGLQDL 60

Query: 61  HDSIDKLLLLPLTHQALVDNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRR 120
           HDSIDKLLLLPLTHQAL+DNKSVD+LLEGSLKILD+C LAKD+LSQMKESAHELESALRR
Sbjct: 61  HDSIDKLLLLPLTHQALIDNKSVDELLEGSLKILDMCDLAKDVLSQMKESAHELESALRR 120

Query: 121 RKDDMIDVQKYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSIQS 180
           RKDD IDVQKYLNSRKMVKKAIH  LKGM+KT+ QKSDES E VSLLKEAE++TYNSI+S
Sbjct: 121 RKDDKIDVQKYLNSRKMVKKAIHMTLKGMKKTNFQKSDESSETVSLLKEAESITYNSIES 180

Query: 181 LLLFVAGPKSPSKMSRWSLVSKLMQPKKVANKEDGAYGNEVEMVDASLYSITGHKSDFFV 240
           LLLFVAGPK PSKMSRWSLVSK +QPKKV +K++   GNEVEMVD +L+SIT HKSDF V
Sbjct: 181 LLLFVAGPKCPSKMSRWSLVSKFIQPKKVVSKDEDTNGNEVEMVDGALHSITDHKSDFLV 240

Query: 241 QVEEVQNSLRKLESCIRDLEEDLENLYRCLIKNRVSFLNILNH 284
           QVE VQNSLRKLESCIRD E+DLE+LYR L+KNRVSFLNILNH
Sbjct: 241 QVENVQNSLRKLESCIRDFEDDLESLYRRLVKNRVSFLNILNH 282

BLAST of MELO3C013275.2 vs. NCBI nr
Match: XP_008447875.1 (PREDICTED: uncharacterized protein LOC103490229 [Cucumis melo])

HSP 1 Score: 440.7 bits (1132), Expect = 3.9e-120
Identity = 237/283 (83.75%), Postives = 253/283 (89.40%), Query Frame = 0

Query: 1   MDSFAANSKKSFHIRSNSLPSKPHPVVDEINENLRRLKASEEATSSSSTLCQKLDGLQDL 60
           MDSF+ NSKKSFHIRSNSLPSKPHPVVDE+NE+L RLKASEEATSSSS+LCQKLDGLQDL
Sbjct: 1   MDSFSVNSKKSFHIRSNSLPSKPHPVVDEVNEHLCRLKASEEATSSSSSLCQKLDGLQDL 60

Query: 61  HDSIDKLLLLPLTHQALVDNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRR 120
           HD IDKLLLLPLTHQAL+DNKSVDDLLEGSLKILDVCALAKD+LSQMKESAHELE ALRR
Sbjct: 61  HDCIDKLLLLPLTHQALIDNKSVDDLLEGSLKILDVCALAKDVLSQMKESAHELECALRR 120

Query: 121 RKDDMIDVQKYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSIQS 180
           RK  M+DVQKYLNSRKM+KKAI KALKGMEKTSSQKSDES EIVSLLKEAETVTYNSI+S
Sbjct: 121 RKYSMVDVQKYLNSRKMIKKAIRKALKGMEKTSSQKSDESSEIVSLLKEAETVTYNSIES 180

Query: 181 LLLFVAGPKSPSKMSRWSLVSKLMQPKKVANKEDGAYGNEVEMVDASLYSITGHKSDFFV 240
           LL FVAGPK PSKMS+WSLVS LMQPK+V  K+D    NEVEMVDA+L SI  HK DF  
Sbjct: 181 LLSFVAGPKLPSKMSKWSLVSMLMQPKRVVCKDDSTDENEVEMVDAALNSIKNHKFDFLA 240

Query: 241 QVEEVQNSLRKLESCIRDLEEDLENLYRCLIKNRVSFLNILNH 284
           Q EEVQ+SL KLE CI D+EEDLE+LYR LIKNRVS LN LNH
Sbjct: 241 QGEEVQHSLWKLELCIHDIEEDLESLYRHLIKNRVSLLNTLNH 283

BLAST of MELO3C013275.2 vs. TAIR10
Match: AT2G17080.1 (Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 199.5 bits (506), Expect = 2.8e-51
Identity = 126/278 (45.32%), Postives = 186/278 (66.91%), Query Frame = 0

Query: 11  SFHIRSNSLPSKPHPVVDEINENLRRLKASEEAT-SSSSTLCQKLDGLQDLHDSIDKLLL 70
           SFH+RSNS PS+ HP    ++E L RL++SE+A+      +CQ+LD LQ+LH+S+DKL+ 
Sbjct: 4   SFHVRSNSFPSRSHPQAAHVDEQLARLRSSEQASXXXXXXICQRLDNLQELHESLDKLIS 63

Query: 71  LPLTHQALV---DNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRRRKDDMI 130
            P+T QAL    + K+V+ LL+GSL+ILD+C ++KD LS+MKE   E++S LRR++ D+ 
Sbjct: 64  RPVTQQALSQEHNKKAVEQLLDGSLRILDLCNISKDALSEMKEGLMEIQSILRRKRGDLS 123

Query: 131 -DVQKYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSIQSLLLFV 190
            +V+KYL SRK +KK+  K  K ++ T  Q  D + + +++  EAE +T +   SLL ++
Sbjct: 124 EEVKKYLTSRKSLKKSFQKVQKSLKVT--QAEDNNDDTLAVFGEAEAITLSLFDSLLSYM 183

Query: 191 AGPKSPSKMSRWSLVSKLMQPKKVANKEDGAYGNEVEMVDASLYSITGHKSDFFVQVEEV 250
           +G K+ SK   WS+VSKLM  KKV  +   A  NE   VD+        +S+  +++++V
Sbjct: 184 SGSKTCSK---WSVVSKLMNKKKVTCE---AQENEFTKVDSEF------QSEKTLKMDDV 243

Query: 251 QNSLRKLESCIRDLEEDLENLYRCLIKNRVSFLNILNH 284
           QN    LESCI+DLE+ LE+L + LIK RVSFLNIL H
Sbjct: 244 QN----LESCIQDLEDGLESLSKSLIKYRVSFLNILGH 263

BLAST of MELO3C013275.2 vs. TAIR10
Match: AT2G17070.1 (Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 198.4 bits (503), Expect = 6.2e-51
Identity = 129/278 (46.40%), Postives = 182/278 (65.47%), Query Frame = 0

Query: 11  SFHIRSNSLPSKPHPVVDEINENLRRLKASEE-ATSSSSTLCQKLDGLQDLHDSIDKLLL 70
           SFH+RS+S PS PHP    ++E L RL++SEE +TSSSS++CQ+LD LQ+LH+S+DKL+ 
Sbjct: 4   SFHVRSHSYPSIPHPQAAHVDEQLARLRSSEETSTSSSSSICQRLDNLQELHESLDKLIR 63

Query: 71  LPLTHQAL---VDNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRRRKDDMI 130
           LP+T QAL    + K V+ LL+GSLKILDVC ++KD LSQMKE   E++S LRR++ D+ 
Sbjct: 64  LPVTQQALGQEKNKKDVEQLLDGSLKILDVCNISKDALSQMKEGLMEIQSILRRKRGDLS 123

Query: 131 -DVQKYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSIQSLLLFV 190
            +V+KYL SRK  KK   K  K ++  ++Q  D   + +++  EAE VT     SL  ++
Sbjct: 124 GEVKKYLASRKSFKKTFQKVQKSLK--AAQAEDNKDKSLAVFGEAEAVTIAMFDSLFSYM 183

Query: 191 AGPKSPSKMSRWSLVSKLMQPKKVANKEDGAYGNEVEMVDASLYSITGHKSDFFVQVEEV 250
           +G K+ SK   WS+VSKLM  KK+  +   A  NE   VD+        +S+  +++E+V
Sbjct: 184 SGSKTCSK---WSVVSKLMNKKKITCE---AQENEFTKVDSEF------QSEKTLKMEDV 243

Query: 251 QNSLRKLESCIRDLEEDLENLYRCLIKNRVSFLNILNH 284
           Q     LESCI+D E+ LE+L + LIK RVS LN   H
Sbjct: 244 Q----ILESCIQDFEDGLESLSKSLIKYRVSILNSFGH 263

BLAST of MELO3C013275.2 vs. TAIR10
Match: AT4G35210.1 (Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 188.7 bits (478), Expect = 4.9e-48
Identity = 123/271 (45.39%), Postives = 181/271 (66.79%), Query Frame = 0

Query: 11  SFHIRSNSLPSKPHPVVDEINENLRRLKASEEATSSSSTLCQKLDGLQDLHDSIDKLLLL 70
           SFH+RS+S PS+ HP    ++E L RL++S   T+SSS++CQ+L  LQDLHDS++K++ L
Sbjct: 4   SFHVRSSSYPSRQHPQAAHVDEQLTRLRSS--GTASSSSICQRLSNLQDLHDSLEKMIRL 63

Query: 71  PLTHQALVDNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRRRKDDM-IDVQ 130
            +T+QAL  ++ ++ LL+GS+KILD+C+++KD LSQMKES  E++S +RR++ D+  +V+
Sbjct: 64  SVTNQALSQDQ-IEKLLDGSIKILDLCSISKDGLSQMKESLKEIQSIVRRKRGDLSAEVK 123

Query: 131 KYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSIQSLLLFVAGPK 190
           KYL SRK +KK+  K LK + KTS  K+D     +++  EAETVT    +SL  F++G K
Sbjct: 124 KYLASRKFLKKSFEKVLKSL-KTSQNKND----ALAVFGEAETVTIALFESLFSFMSGSK 183

Query: 191 SPSKMSRWSLVSKLMQPKKVANKEDGAYGNEVEMVDASLYSITGHKSDFFVQVEEVQNSL 250
           +  K   WSLVSK+M   K   +   A  NE   VD         +S+  +Q+E+VQN  
Sbjct: 184 ACGK---WSLVSKMMSQSKGTCE---AEANEFTRVDMEF------QSEKSLQMEDVQN-- 243

Query: 251 RKLESCIRDLEEDLENLYRCLIKNRVSFLNI 281
             LE CI+DLE+ + +L + LIK RVS LNI
Sbjct: 244 --LEICIQDLEDGIGSLSKSLIKYRVSILNI 250

BLAST of MELO3C013275.2 vs. TAIR10
Match: AT4G35200.1 (Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 186.4 bits (472), Expect = 2.4e-47
Identity = 120/271 (44.28%), Postives = 178/271 (65.68%), Query Frame = 0

Query: 11  SFHIRSNSLPSKPHPVVDEINENLRRLKASEEATSSSSTLCQKLDGLQDLHDSIDKLLLL 70
           SFH+RSNS PS+ HP    ++E L RL++S+ A  SSS++CQ+L  LQDLHDS++K++ L
Sbjct: 4   SFHVRSNSYPSRQHPQAAHVDEQLTRLRSSDSA--SSSSICQRLSNLQDLHDSLEKMIRL 63

Query: 71  PLTHQALVDNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRRRKDDMI-DVQ 130
            +T+ AL  ++ ++ LL+GSL+ILD+C +AKD +SQMKE   E++S LRR+  D+  +V+
Sbjct: 64  SVTNLALSQDQ-IEKLLDGSLRILDLCNIAKDAISQMKEGLMEIQSILRRKPGDLSGEVK 123

Query: 131 KYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSIQSLLLFVAGPK 190
           KYL SRK +KK++ K +K ++   S+ S  +  +V     AE VT    +SL  F++G K
Sbjct: 124 KYLVSRKFLKKSLQKVIKSLKVCQSKDSTNASLVV--FGRAEAVTMALFESLFSFMSGSK 183

Query: 191 SPSKMSRWSLVSKLMQPKKVANKEDGAYGNEVEMVDASLYSITGHKSDFFVQVEEVQNSL 250
           +  K   WSLVSK+M   KV  +   A  NE   +D+        +S+  +Q+E+VQN  
Sbjct: 184 ACGK---WSLVSKMMSQNKVTCE---AEANEFTRIDSEF------QSEKSLQMEDVQN-- 243

Query: 251 RKLESCIRDLEEDLENLYRCLIKNRVSFLNI 281
             LESCI+DLE+ +E+L + LIK RVS LNI
Sbjct: 244 --LESCIQDLEDGIESLSKSLIKYRVSILNI 253

BLAST of MELO3C013275.2 vs. TAIR10
Match: AT3G51400.1 (Arabidopsis protein of unknown function (DUF241))

HSP 1 Score: 107.1 bits (266), Expect = 1.9e-23
Identity = 87/280 (31.07%), Postives = 156/280 (55.71%), Query Frame = 0

Query: 11  SFHIRSNSLPSKPHP-VVDEINENLRRLKASEEATSSSSTLCQKLDGLQDLHDSIDKLLL 70
           S+H+RS+SLP++ HP  +++I + L +L+A +   +S S L    D +  L +     LL
Sbjct: 4   SYHVRSSSLPARLHPHGLNQIQQLLNKLRADD--NNSLSLLSNLYDSVSHLFNDSPSSLL 63

Query: 71  LPLTHQALVDNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRRRK---DDMI 130
           +P  H +   +     LL+ SL  LD+C+  +DI  ++K+   +L SA RRR+   D  I
Sbjct: 64  VP--HHSFFTH-----LLDLSLLHLDLCSKLRDITCRIKDCLRDLRSAFRRRRHSGDSTI 123

Query: 131 --DVQKYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSIQSLLLF 190
              V+ ++ SRK V K I K L  +++T    S+ S  +++LL++  + T  + +++LL 
Sbjct: 124 RCHVKAFIRSRKAVHKDIAKLLLLLKQTGLSSSESSHPLITLLQQVCSQTCQTFRTVLLS 183

Query: 191 VAGPKSPSKMSRWSLVSKLM--QPKKVANKEDGAYGNEVEMVDASLYSITGHKSDFFVQV 250
           ++      + S+W+LV+KL+       + +    + NE +M+D  L   +  +     ++
Sbjct: 184 LSTAVPKPRPSKWALVTKLVIKNVTSTSGQVRTGHRNEFQMMDEELRRFSMAEEIKKDRI 243

Query: 251 EEVQNSLRKLESCIRDLEEDLENLYRCLIKNRVSFLNILN 283
           + +  +L K++  + DLEE LE LYR +I+ RVS LNIL+
Sbjct: 244 KSMITNLDKVDVAVEDLEESLERLYRRMIQARVSLLNILS 274

BLAST of MELO3C013275.2 vs. TrEMBL
Match: tr|A0A1S3BIC9|A0A1S3BIC9_CUCME (uncharacterized protein LOC103490394 OS=Cucumis melo OX=3656 GN=LOC103490394 PE=4 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 1.1e-150
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 0

Query: 1   MDSFAANSKKSFHIRSNSLPSKPHPVVDEINENLRRLKASEEATSSSSTLCQKLDGLQDL 60
           MDSFAANSKKSFHIRSNSLPSKPHPVVDEINENLRRLKASEEATSSSSTLCQKLDGLQDL
Sbjct: 1   MDSFAANSKKSFHIRSNSLPSKPHPVVDEINENLRRLKASEEATSSSSTLCQKLDGLQDL 60

Query: 61  HDSIDKLLLLPLTHQALVDNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRR 120
           HDSIDKLLLLPLTHQALVDNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRR
Sbjct: 61  HDSIDKLLLLPLTHQALVDNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRR 120

Query: 121 RKDDMIDVQKYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSIQS 180
           RKDDMIDVQKYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSIQS
Sbjct: 121 RKDDMIDVQKYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSIQS 180

Query: 181 LLLFVAGPKSPSKMSRWSLVSKLMQPKKVANKEDGAYGNEVEMVDASLYSITGHKSDFFV 240
           LLLFVAGPKSPSKMSRWSLVSKLMQPKKVANKEDGAYGNEVEMVDASLYSITGHKSDFFV
Sbjct: 181 LLLFVAGPKSPSKMSRWSLVSKLMQPKKVANKEDGAYGNEVEMVDASLYSITGHKSDFFV 240

Query: 241 QVEEVQNSLRKLESCIRDLEEDLENLYRCLIKNRVSFLNILNHFLNH 288
           QVEEVQNSLRKLESCIRDLEEDLENLYRCLIKNRVSFLNILNHFLNH
Sbjct: 241 QVEEVQNSLRKLESCIRDLEEDLENLYRCLIKNRVSFLNILNHFLNH 287

BLAST of MELO3C013275.2 vs. TrEMBL
Match: tr|A0A1S4DWU1|A0A1S4DWU1_CUCME (uncharacterized protein LOC107990906 OS=Cucumis melo OX=3656 GN=LOC107990906 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 2.1e-125
Identity = 243/283 (85.87%), Postives = 261/283 (92.23%), Query Frame = 0

Query: 1   MDSFAANSKKSFHIRSNSLPSKPHPVVDEINENLRRLKASEEATSSSSTLCQKLDGLQDL 60
           MDSFAANSKKSFH+RSNSLPSKPHPVVDE+NENL RL+ASEEATSSSS+LCQKLDGLQDL
Sbjct: 1   MDSFAANSKKSFHVRSNSLPSKPHPVVDEVNENLCRLRASEEATSSSSSLCQKLDGLQDL 60

Query: 61  HDSIDKLLLLPLTHQALVDNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRR 120
            DSIDKLLLLPLTHQALVDNK VD+LLEGSLKILDVCALAKD+LSQMKESAHELESALRR
Sbjct: 61  QDSIDKLLLLPLTHQALVDNKLVDELLEGSLKILDVCALAKDVLSQMKESAHELESALRR 120

Query: 121 RKDDMIDVQKYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSIQS 180
           RKDD IDVQKYLNSRKMVKKAIH  LK M+KT+ QKSDES EIVSLLKEAE+V YNSI+S
Sbjct: 121 RKDDKIDVQKYLNSRKMVKKAIHMTLKEMKKTNFQKSDESSEIVSLLKEAESVAYNSIES 180

Query: 181 LLLFVAGPKSPSKMSRWSLVSKLMQPKKVANKEDGAYGNEVEMVDASLYSITGHKSDFFV 240
           LLLFVAGPK PSKMSRWSLVSK +QPKKV +K++   GNEVEMVD +LYSIT HKSDF V
Sbjct: 181 LLLFVAGPKFPSKMSRWSLVSKFIQPKKVVSKDEDTNGNEVEMVDVALYSITHHKSDFHV 240

Query: 241 QVEEVQNSLRKLESCIRDLEEDLENLYRCLIKNRVSFLNILNH 284
           QVE+VQNSLRKLESCI D EEDLE+LYR L+KNRVSFLNILNH
Sbjct: 241 QVEDVQNSLRKLESCICDFEEDLESLYRRLVKNRVSFLNILNH 283

BLAST of MELO3C013275.2 vs. TrEMBL
Match: tr|A0A0A0K1H9|A0A0A0K1H9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G023920 PE=4 SV=1)

HSP 1 Score: 450.7 bits (1158), Expect = 2.5e-123
Identity = 238/283 (84.10%), Postives = 259/283 (91.52%), Query Frame = 0

Query: 1   MDSFAANSKKSFHIRSNSLPSKPHPVVDEINENLRRLKASEEATSSSSTLCQKLDGLQDL 60
           MDSF+ NSKKSFH+RSNSLPSKPHPVVDE++E+L RLKASEEATSSSS+LCQKLDGLQDL
Sbjct: 1   MDSFSVNSKKSFHVRSNSLPSKPHPVVDEVSEHLCRLKASEEATSSSSSLCQKLDGLQDL 60

Query: 61  HDSIDKLLLLPLTHQALVDNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRR 120
           HD IDKLLLLPLTHQAL+DNKSVDDLLEGSLKILDVCALAKD+LSQMKESAHELESALRR
Sbjct: 61  HDCIDKLLLLPLTHQALIDNKSVDDLLEGSLKILDVCALAKDVLSQMKESAHELESALRR 120

Query: 121 RKDDMIDVQKYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSIQS 180
           RKD M+D+QKYLNSRKMVKKAIH  LKGM+KT+ QKSDES EIVSLLKEAETVTYNSI+S
Sbjct: 121 RKDGMVDIQKYLNSRKMVKKAIHMTLKGMKKTNFQKSDESSEIVSLLKEAETVTYNSIES 180

Query: 181 LLLFVAGPKSPSKMSRWSLVSKLMQPKKVANKEDGAYGNEVEMVDASLYSITGHKSDFFV 240
           LLLFVAGPK PSKMS+WSLVS LMQPK+VA K+D    NEVEMVDA+L SIT  KSD F 
Sbjct: 181 LLLFVAGPKLPSKMSKWSLVSMLMQPKRVACKDDSTDANEVEMVDAALNSITNRKSDCFA 240

Query: 241 QVEEVQNSLRKLESCIRDLEEDLENLYRCLIKNRVSFLNILNH 284
           Q E+VQNSLRKLE CI D+EEDLE+LYR L+KNRVSFLNILNH
Sbjct: 241 QGEDVQNSLRKLELCIHDIEEDLESLYRRLVKNRVSFLNILNH 283

BLAST of MELO3C013275.2 vs. TrEMBL
Match: tr|A0A1S4DWT7|A0A1S4DWT7_CUCME (uncharacterized protein LOC103490230 OS=Cucumis melo OX=3656 GN=LOC103490230 PE=4 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 2.1e-122
Identity = 236/283 (83.39%), Postives = 258/283 (91.17%), Query Frame = 0

Query: 1   MDSFAANSKKSFHIRSNSLPSKPHPVVDEINENLRRLKASEEATSSSSTLCQKLDGLQDL 60
           MDS  ANSKKSFH+RSNSLPSKPHPVVDE++ENL RL+ASEE  SSSS LCQKLDGLQDL
Sbjct: 1   MDSLPANSKKSFHVRSNSLPSKPHPVVDEVDENLCRLRASEEVASSSS-LCQKLDGLQDL 60

Query: 61  HDSIDKLLLLPLTHQALVDNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRR 120
           HDSIDKLLLLPLTHQAL+DNKSVD+LLEGSLKILD+C LAKD+LSQMKESAHELESALRR
Sbjct: 61  HDSIDKLLLLPLTHQALIDNKSVDELLEGSLKILDMCDLAKDVLSQMKESAHELESALRR 120

Query: 121 RKDDMIDVQKYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSIQS 180
           RKDD IDVQKYLNSRKMVKKAIH  LKGM+KT+ QKSDES E VSLLKEAE++TYNSI+S
Sbjct: 121 RKDDKIDVQKYLNSRKMVKKAIHMTLKGMKKTNFQKSDESSETVSLLKEAESITYNSIES 180

Query: 181 LLLFVAGPKSPSKMSRWSLVSKLMQPKKVANKEDGAYGNEVEMVDASLYSITGHKSDFFV 240
           LLLFVAGPK PSKMSRWSLVSK +QPKKV +K++   GNEVEMVD +L+SIT HKSDF V
Sbjct: 181 LLLFVAGPKCPSKMSRWSLVSKFIQPKKVVSKDEDTNGNEVEMVDGALHSITDHKSDFLV 240

Query: 241 QVEEVQNSLRKLESCIRDLEEDLENLYRCLIKNRVSFLNILNH 284
           QVE VQNSLRKLESCIRD E+DLE+LYR L+KNRVSFLNILNH
Sbjct: 241 QVENVQNSLRKLESCIRDFEDDLESLYRRLVKNRVSFLNILNH 282

BLAST of MELO3C013275.2 vs. TrEMBL
Match: tr|A0A1S3BIF1|A0A1S3BIF1_CUCME (uncharacterized protein LOC103490229 OS=Cucumis melo OX=3656 GN=LOC103490229 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 2.6e-120
Identity = 237/283 (83.75%), Postives = 253/283 (89.40%), Query Frame = 0

Query: 1   MDSFAANSKKSFHIRSNSLPSKPHPVVDEINENLRRLKASEEATSSSSTLCQKLDGLQDL 60
           MDSF+ NSKKSFHIRSNSLPSKPHPVVDE+NE+L RLKASEEATSSSS+LCQKLDGLQDL
Sbjct: 1   MDSFSVNSKKSFHIRSNSLPSKPHPVVDEVNEHLCRLKASEEATSSSSSLCQKLDGLQDL 60

Query: 61  HDSIDKLLLLPLTHQALVDNKSVDDLLEGSLKILDVCALAKDILSQMKESAHELESALRR 120
           HD IDKLLLLPLTHQAL+DNKSVDDLLEGSLKILDVCALAKD+LSQMKESAHELE ALRR
Sbjct: 61  HDCIDKLLLLPLTHQALIDNKSVDDLLEGSLKILDVCALAKDVLSQMKESAHELECALRR 120

Query: 121 RKDDMIDVQKYLNSRKMVKKAIHKALKGMEKTSSQKSDESLEIVSLLKEAETVTYNSIQS 180
           RK  M+DVQKYLNSRKM+KKAI KALKGMEKTSSQKSDES EIVSLLKEAETVTYNSI+S
Sbjct: 121 RKYSMVDVQKYLNSRKMIKKAIRKALKGMEKTSSQKSDESSEIVSLLKEAETVTYNSIES 180

Query: 181 LLLFVAGPKSPSKMSRWSLVSKLMQPKKVANKEDGAYGNEVEMVDASLYSITGHKSDFFV 240
           LL FVAGPK PSKMS+WSLVS LMQPK+V  K+D    NEVEMVDA+L SI  HK DF  
Sbjct: 181 LLSFVAGPKLPSKMSKWSLVSMLMQPKRVVCKDDSTDENEVEMVDAALNSIKNHKFDFLA 240

Query: 241 QVEEVQNSLRKLESCIRDLEEDLENLYRCLIKNRVSFLNILNH 284
           Q EEVQ+SL KLE CI D+EEDLE+LYR LIKNRVS LN LNH
Sbjct: 241 QGEEVQHSLWKLELCIHDIEEDLESLYRHLIKNRVSLLNTLNH 283

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008448107.11.6e-150100.00PREDICTED: uncharacterized protein LOC103490394 [Cucumis melo][more]
XP_016900443.13.1e-12585.87PREDICTED: uncharacterized protein LOC107990906 [Cucumis melo][more]
XP_004144940.23.8e-12384.10PREDICTED: uncharacterized protein LOC101211103 [Cucumis sativus] >KGN43318.1 hy... [more]
XP_016900444.13.2e-12283.39PREDICTED: uncharacterized protein LOC103490230 [Cucumis melo][more]
XP_008447875.13.9e-12083.75PREDICTED: uncharacterized protein LOC103490229 [Cucumis melo][more]
Match NameE-valueIdentityDescription
AT2G17080.12.8e-5145.32Arabidopsis protein of unknown function (DUF241)[more]
AT2G17070.16.2e-5146.40Arabidopsis protein of unknown function (DUF241)[more]
AT4G35210.14.9e-4845.39Arabidopsis protein of unknown function (DUF241)[more]
AT4G35200.12.4e-4744.28Arabidopsis protein of unknown function (DUF241)[more]
AT3G51400.11.9e-2331.07Arabidopsis protein of unknown function (DUF241)[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3BIC9|A0A1S3BIC9_CUCME1.1e-150100.00uncharacterized protein LOC103490394 OS=Cucumis melo OX=3656 GN=LOC103490394 PE=... [more]
tr|A0A1S4DWU1|A0A1S4DWU1_CUCME2.1e-12585.87uncharacterized protein LOC107990906 OS=Cucumis melo OX=3656 GN=LOC107990906 PE=... [more]
tr|A0A0A0K1H9|A0A0A0K1H9_CUCSA2.5e-12384.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G023920 PE=4 SV=1[more]
tr|A0A1S4DWT7|A0A1S4DWT7_CUCME2.1e-12283.39uncharacterized protein LOC103490230 OS=Cucumis melo OX=3656 GN=LOC103490230 PE=... [more]
tr|A0A1S3BIF1|A0A1S3BIF1_CUCME2.6e-12083.75uncharacterized protein LOC103490229 OS=Cucumis melo OX=3656 GN=LOC103490229 PE=... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004320DUF241_pln
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006413 translational initiation
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C013275.2.1MELO3C013275.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 242..269
NoneNo IPR availableCOILSCoilCoilcoord: 104..124
NoneNo IPR availablePANTHERPTHR31509FAMILY NOT NAMEDcoord: 1..283
NoneNo IPR availablePANTHERPTHR31509:SF43SUBFAMILY NOT NAMEDcoord: 1..283
IPR004320Protein of unknown function DUF241, plantPFAMPF03087DUF241coord: 53..280
e-value: 9.2E-69
score: 231.7

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C013275.2Cucsa.099440Cucumber (Gy14) v1cgymedB118
The following gene(s) are paralogous to this gene:

None