MELO3C012480.2 (gene) Melon (DHL92) v3.6.1
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAAGAAGACAGACCCAACCGCCGAAATCTCCTTGAATTCGCTCTTTCTTCTCTTGTTCCCGCCGACGCTCACCGCCACTCTAACCCTTCCATCTCCCTGTTGGTTCGACCAACTTTAAAATAAGGTAGATTTGGAATTATGTTAAGTTTTACTTGAATTTCTTCTTAATTCGAAGCAATAAAATGGGTTGTTCCGACTTTGATCGAGTCTAATAGGCTACGGATTTGTTATTTTACATCGTTATTTCCTGTTTGGGTCTTGATCGGGATTTGGGTTTTCCGTCATAGTCAGCTTAGGATTTCATTATCGTTTGTGTCGTGGCTGTACTAGGGGAGTAATTAGATAGGTTAGGGTTTCTATCTTCAGTCTTCTATTTCTCTTTACTGGGTGTTAGGGAACTGGACTTGAGCTGTTCATTGGAGTGCATTATTTATTGACCTTATTTCTTCTGCAGATGGAGATCGATAAACATAATGATGAGGGAGATGATAAAACAAAATACGGTAAACTCAATATTTGCCAGCAATGTGGCGCCGCGTTCAGAAAGCCTGCTTACTTGAAGCAACATATGCAAAGCCATTCTCTCGAGGTATTTTACTTAATCATCTGCTTCTTGTTATATTAGTTTCTGTCATACTCACAGTGATTTTATGAGAGAAAATGTTCTTTTTTTCTTGTCTACATTATTAGTTTAATGCTAATGGATTCACCAGCATACTTATCATCCAACGCGTTCAAGGTTGATATATTTTAAGTGCAACATACTATGTACCTATAGTTAAACTTTACTGTTTAATCTTTGATTTTAGGCATTGTTTTTACATTGATTGATTGTCTTTTTTCTTGCGTTGAAGTCTATAAGTTTTGCAGGAACAAATCCTTAAATATAATAAATGAATGTGAAAGATCCTGGATATCTCAGCGTGAAGCATTGGATCCCACATTAAGAACTCCAAAATGCATGAGGCTGGATTTTGTCGTTGCTTGACTGGATCAGTATCAGGTTGGGAGACCACCTGAGAAGCTCCATCAAGTGGGCCTCGGTCACGCTACAGTAGTTTGAGGTTTGAAGTCTAGTAATTGAATGTGTTGGGAGAGGCTTTCCGTCAATGAACACAAGGTTAACCAATTTTATTGCATTACTTTAATGCAGAGGTCATATGTTTGTTCCATAGATGGTTGTAATGCTAGTTATAGAAGGAAGGATCATTTGACCCGCCACCTTCTCCATCACCAAGGAACCATGTTCAAATGTCCAATAGAGAGCTGTTGCCGTGAATTTGCATACTTATCATGTGTGACCAGACACTTGAAAGAATGCCATGAAGGTGAAGCTCCTCCTGAAGAATGTCAGAAGCAGTTTGTTTGCCCCGAAGATGGATGTGGGAAGGTTTTCAGATATGCCTCCAGACTGCAAAAGCATGAGGGCTCCCATGGTCTGTTTCTTATTCTTTCTTTATAAGCACTAAATATTAACCGTTTGTTTTGACACATTCATGTATTAATTTCAAGTTTTATTATACTATAGTTAAGCTAGACTCAATAGAGGCATGTTGTACTGAACCGGGTTGCCTCAAAACATTTACCAACAAGCAATGTCTGAGGGCTCATATGCAGACCTGCCACCAATACGTGAAATGTGAGATTTGTGGGGAAAAGAAATTAAGAAAGAACTTGAAGCAACATCTACGACAAAAGCATGAAAGTGAAGGTCCTCTGGAGGCAATTCCATGCACGTATGAGGGCTGCAGCAAGGTTTTTTCAACAGTAAGTAGCAGAGTCTTTGCAAATCCCTAACTGGGTATTGTTAAAGTGCCTTTTAGCTGAGCTATAGGGAGGATTTGTAATGAATAGCGTTCCTGTTTATTTAGATAGGATGAGATCTTTGACAAGATCCACATTTTTGGTTTCTCAGGCTTCAAATCTCCAGCAACACACGAAGGTCGTGCATCTGGGACAGAAGCCTTTTGCATGTTGTTTCCCTGGTTGTGGCATGAGATTTGGGTACAAGCATGTGAGAGACAACCATGAGAAAAGTGGGCACCATGTTTACACTAATGTAAGTCATTTGGTTAGCTCACAAGTATTTGTGTAGTCTTGACCTTCATGTAGATTTACTAAAAAAGTGTGTGGAATCAGGGGGATTTTGAAGCAGCCGATGAACAATTCCGCTCAAAGCCAAGGGGAGGGCGAAAAAGAATCTGTCCAACGGTTGAAATGCTCATAAGGAAGAGGGTTACCCCCCCAAGTGACTTGGATTTCATGATGGAGTGAGTATTAGTTTCGTCTTATTTGGATTTAAGGGTGAATCAAGCCAACCTCCCCACCCCTTTGTTACTTATCCATGTCGACTGAAAGTAATTGATAGCTAACCAATGTATAGAATCTGTAAGTAGAAATATAAGCCCACCACTTACCTCTAGCAAAATGGAGTAGTTATACATGTACCTTTTGTGCTCGTTGGCAGTAAAATATGGAAGGTTCTTTTTTAGTAGTTCCGGTTGAGGCTTTGCATTCTCATTTTCTTTTAGTTCCTTGAACCTCGTTTGCTTGGCTTGGCATCGTCTATTCGTGTGGTCAATTGAGAACCACTTCTAACCTTTTTTTAGTTACCAATAAACATTTTACTGTTCGATTTTTC AGAAGAAGACAGACCCAACCGCCGAAATCTCCTTGAATTCGCTCTTTCTTCTCTTGTTCCCGCCGACGCTCACCGCCACTCTAACCCTTCCATCTCCCTGTTGGTTCGACCAACTTTAAAATAAGATGGAGATCGATAAACATAATGATGAGGGAGATGATAAAACAAAATACGGTAAACTCAATATTTGCCAGCAATGTGGCGCCGCGTTCAGAAAGCCTGCTTACTTGAAGCAACATATGCAAAGCCATTCTCTCGAGGAACAAATCCTTAAATATAATAAATGAATGTGAAAGATCCTGGATATCTCAGCGTGAAGCATTGGATCCCACATTAAGAACTCCAAAATGCATGAGGCTGGATTTTGTCGTTGCTTGACTGGATCAGTATCAGGTTGGGAGACCACCTGAGAAGCTCCATCAAGTGGGCCTCGGTCACGCTACAGTAGTTTGAGAGGTCATATGTTTGTTCCATAGATGGTTGTAATGCTAGTTATAGAAGGAAGGATCATTTGACCCGCCACCTTCTCCATCACCAAGGAACCATGTTCAAATGTCCAATAGAGAGCTGTTGCCGTGAATTTGCATACTTATCATGTGTGACCAGACACTTGAAAGAATGCCATGAAGGTGAAGCTCCTCCTGAAGAATGTCAGAAGCAGTTTGTTTGCCCCGAAGATGGATGTGGGAAGGTTTTCAGATATGCCTCCAGACTGCAAAAGCATGAGGGCTCCCATGTTAAGCTAGACTCAATAGAGGCATGTTGTACTGAACCGGGTTGCCTCAAAACATTTACCAACAAGCAATGTCTGAGGGCTCATATGCAGACCTGCCACCAATACGTGAAATGTGAGATTTGTGGGGAAAAGAAATTAAGAAAGAACTTGAAGCAACATCTACGACAAAAGCATGAAAGTGAAGGTCCTCTGGAGGCAATTCCATGCACGTATGAGGGCTGCAGCAAGGTTTTTTCAACAGCTTCAAATCTCCAGCAACACACGAAGGTCGTGCATCTGGGACAGAAGCCTTTTGCATGTTGTTTCCCTGGTTGTGGCATGAGATTTGGGTACAAGCATGTGAGAGACAACCATGAGAAAAGTGGGCACCATGTTTACACTAATGGGGATTTTGAAGCAGCCGATGAACAATTCCGCTCAAAGCCAAGGGGAGGGCGAAAAAGAATCTGTCCAACGGTTGAAATGCTCATAAGGAAGAGGGTTACCCCCCCAAGTGACTTGGATTTCATGATGGAGTGAGTATTAGTTTCGTCTTATTTGGATTTAAGGGTGAATCAAGCCAACCTCCCCACCCCTTTGTTACTTATCCATGTCGACTGAAAGTAATTGATAGCTAACCAATGTATAGAATCTGTAAGTAGAAATATAAGCCCACCACTTACCTCTAGCAAAATGGAGTAGTTATACATGTACCTTTTGTGCTCGTTGGCAGTAAAATATGGAAGGTTCTTTTTTAGTAGTTCCGGTTGAGGCTTTGCATTCTCATTTTCTTTTAGTTCCTTGAACCTCGTTTGCTTGGCTTGGCATCGTCTATTCGTGTGGTCAATTGAGAACCACTTCTAACCTTTTTTTAGTTACCAATAAACATTTTACTGTTCGATTTTTC ATGTTCAAATGTCCAATAGAGAGCTGTTGCCGTGAATTTGCATACTTATCATGTGTGACCAGACACTTGAAAGAATGCCATGAAGGTGAAGCTCCTCCTGAAGAATGTCAGAAGCAGTTTGTTTGCCCCGAAGATGGATGTGGGAAGGTTTTCAGATATGCCTCCAGACTGCAAAAGCATGAGGGCTCCCATGTTAAGCTAGACTCAATAGAGGCATGTTGTACTGAACCGGGTTGCCTCAAAACATTTACCAACAAGCAATGTCTGAGGGCTCATATGCAGACCTGCCACCAATACGTGAAATGTGAGATTTGTGGGGAAAAGAAATTAAGAAAGAACTTGAAGCAACATCTACGACAAAAGCATGAAAGTGAAGGTCCTCTGGAGGCAATTCCATGCACGTATGAGGGCTGCAGCAAGGTTTTTTCAACAGCTTCAAATCTCCAGCAACACACGAAGGTCGTGCATCTGGGACAGAAGCCTTTTGCATGTTGTTTCCCTGGTTGTGGCATGAGATTTGGGTACAAGCATGTGAGAGACAACCATGAGAAAAGTGGGCACCATGTTTACACTAATGGGGATTTTGAAGCAGCCGATGAACAATTCCGCTCAAAGCCAAGGGGAGGGCGAAAAAGAATCTGTCCAACGGTTGAAATGCTCATAAGGAAGAGGGTTACCCCCCCAAGTGACTTGGATTTCATGATGGAGTGA MFKCPIESCCREFAYLSCVTRHLKECHEGEAPPEECQKQFVCPEDGCGKVFRYASRLQKHEGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKLRKNLKQHLRQKHESEGPLEAIPCTYEGCSKVFSTASNLQQHTKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGHHVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPSDLDFMME
BLAST of MELO3C012480.2 vs. NCBI nr
Match: XP_008446968.1 (PREDICTED: transcription factor IIIA [Cucumis melo]) HSP 1 Score: 518.1 bits (1333), Expect = 1.6e-143 Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0
BLAST of MELO3C012480.2 vs. NCBI nr
Match: KGN52327.1 (hypothetical protein Csa_5G623900 [Cucumis sativus]) HSP 1 Score: 461.5 bits (1186), Expect = 1.8e-126 Identity = 216/246 (87.80%), Postives = 218/246 (88.62%), Query Frame = 0
BLAST of MELO3C012480.2 vs. NCBI nr
Match: XP_004142387.2 (PREDICTED: zinc finger X-linked protein ZXDB [Cucumis sativus]) HSP 1 Score: 461.5 bits (1186), Expect = 1.8e-126 Identity = 216/246 (87.80%), Postives = 218/246 (88.62%), Query Frame = 0
BLAST of MELO3C012480.2 vs. NCBI nr
Match: XP_022139243.1 (transcription factor IIIA isoform X1 [Momordica charantia]) HSP 1 Score: 379.4 bits (973), Expect = 8.8e-102 Identity = 175/236 (74.15%), Postives = 196/236 (83.05%), Query Frame = 0
BLAST of MELO3C012480.2 vs. NCBI nr
Match: XP_022139244.1 (transcription factor IIIA isoform X2 [Momordica charantia]) HSP 1 Score: 362.1 bits (928), Expect = 1.5e-96 Identity = 169/236 (71.61%), Postives = 190/236 (80.51%), Query Frame = 0
BLAST of MELO3C012480.2 vs. TAIR10
Match: AT1G72050.2 (transcription factor IIIA) HSP 1 Score: 264.2 bits (674), Expect = 7.5e-71 Identity = 132/282 (46.81%), Postives = 164/282 (58.16%), Query Frame = 0
BLAST of MELO3C012480.2 vs. Swiss-Prot
Match: sp|Q84MZ4|TF3A_ARATH (Transcription factor IIIA OS=Arabidopsis thaliana OX=3702 GN=TFIIIA PE=1 SV=1) HSP 1 Score: 264.2 bits (674), Expect = 1.4e-69 Identity = 132/282 (46.81%), Postives = 164/282 (58.16%), Query Frame = 0
BLAST of MELO3C012480.2 vs. Swiss-Prot
Match: sp|P79797|TF3A_ICTPU (Transcription factor IIIA OS=Ictalurus punctatus OX=7998 GN=gtf3a PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.1e-06 Identity = 45/184 (24.46%), Postives = 69/184 (37.50%), Query Frame = 0
BLAST of MELO3C012480.2 vs. Swiss-Prot
Match: sp|Q96CK0|ZN653_HUMAN (Zinc finger protein 653 OS=Homo sapiens OX=9606 GN=ZNF653 PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 3.6e-06 Identity = 24/66 (36.36%), Postives = 35/66 (53.03%), Query Frame = 0
BLAST of MELO3C012480.2 vs. Swiss-Prot
Match: sp|Q6YND2|ZN653_MOUSE (Zinc finger protein 653 OS=Mus musculus OX=10090 GN=Znf653 PE=2 SV=2) HSP 1 Score: 53.5 bits (127), Expect = 3.6e-06 Identity = 24/66 (36.36%), Postives = 35/66 (53.03%), Query Frame = 0
BLAST of MELO3C012480.2 vs. Swiss-Prot
Match: sp|Q9VH70|TOPI_DROME (Testis-specific zinc finger protein topi OS=Drosophila melanogaster OX=7227 GN=topi PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 2.0e-04 Identity = 38/138 (27.54%), Postives = 56/138 (40.58%), Query Frame = 0
BLAST of MELO3C012480.2 vs. TrEMBL
Match: tr|A0A1S3BH74|A0A1S3BH74_CUCME (transcription factor IIIA OS=Cucumis melo OX=3656 GN=LOC103489521 PE=4 SV=1) HSP 1 Score: 518.1 bits (1333), Expect = 1.1e-143 Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0
BLAST of MELO3C012480.2 vs. TrEMBL
Match: tr|A0A0A0KV54|A0A0A0KV54_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623900 PE=4 SV=1) HSP 1 Score: 461.5 bits (1186), Expect = 1.2e-126 Identity = 216/246 (87.80%), Postives = 218/246 (88.62%), Query Frame = 0
BLAST of MELO3C012480.2 vs. TrEMBL
Match: tr|A0A2P5CW95|A0A2P5CW95_PARAD (TFIIH C1-like domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_118300 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 6.3e-88 Identity = 150/234 (64.10%), Postives = 183/234 (78.21%), Query Frame = 0
BLAST of MELO3C012480.2 vs. TrEMBL
Match: tr|A0A1R3GTA2|A0A1R3GTA2_9ROSI (Zinc finger, C2H2 OS=Corchorus olitorius OX=93759 GN=COLO4_33458 PE=4 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 1.2e-86 Identity = 149/238 (62.61%), Postives = 185/238 (77.73%), Query Frame = 0
BLAST of MELO3C012480.2 vs. TrEMBL
Match: tr|A0A1R3J245|A0A1R3J245_COCAP (Zinc finger, C2H2 OS=Corchorus capsularis OX=210143 GN=CCACVL1_08120 PE=4 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 1.3e-85 Identity = 151/229 (65.94%), Postives = 179/229 (78.17%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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