MELO3C012480.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C012480.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
Descriptiontranscription factor IIIA
Locationchr10 : 181975 .. 184616 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGAAGAAGACAGACCCAACCGCCGAAATCTCCTTGAATTCGCTCTTTCTTCTCTTGTTCCCGCCGACGCTCACCGCCACTCTAACCCTTCCATCTCCCTGTTGGTTCGACCAACTTTAAAATAAGGTAGATTTGGAATTATGTTAAGTTTTACTTGAATTTCTTCTTAATTCGAAGCAATAAAATGGGTTGTTCCGACTTTGATCGAGTCTAATAGGCTACGGATTTGTTATTTTACATCGTTATTTCCTGTTTGGGTCTTGATCGGGATTTGGGTTTTCCGTCATAGTCAGCTTAGGATTTCATTATCGTTTGTGTCGTGGCTGTACTAGGGGAGTAATTAGATAGGTTAGGGTTTCTATCTTCAGTCTTCTATTTCTCTTTACTGGGTGTTAGGGAACTGGACTTGAGCTGTTCATTGGAGTGCATTATTTATTGACCTTATTTCTTCTGCAGATGGAGATCGATAAACATAATGATGAGGGAGATGATAAAACAAAATACGGTAAACTCAATATTTGCCAGCAATGTGGCGCCGCGTTCAGAAAGCCTGCTTACTTGAAGCAACATATGCAAAGCCATTCTCTCGAGGTATTTTACTTAATCATCTGCTTCTTGTTATATTAGTTTCTGTCATACTCACAGTGATTTTATGAGAGAAAATGTTCTTTTTTTCTTGTCTACATTATTAGTTTAATGCTAATGGATTCACCAGCATACTTATCATCCAACGCGTTCAAGGTTGATATATTTTAAGTGCAACATACTATGTACCTATAGTTAAACTTTACTGTTTAATCTTTGATTTTAGGCATTGTTTTTACATTGATTGATTGTCTTTTTTCTTGCGTTGAAGTCTATAAGTTTTGCAGGAACAAATCCTTAAATATAATAAATGAATGTGAAAGATCCTGGATATCTCAGCGTGAAGCATTGGATCCCACATTAAGAACTCCAAAATGCATGAGGCTGGATTTTGTCGTTGCTTGACTGGATCAGTATCAGGTTGGGAGACCACCTGAGAAGCTCCATCAAGTGGGCCTCGGTCACGCTACAGTAGTTTGAGGTTTGAAGTCTAGTAATTGAATGTGTTGGGAGAGGCTTTCCGTCAATGAACACAAGGTTAACCAATTTTATTGCATTACTTTAATGCAGAGGTCATATGTTTGTTCCATAGATGGTTGTAATGCTAGTTATAGAAGGAAGGATCATTTGACCCGCCACCTTCTCCATCACCAAGGAACCATGTTCAAATGTCCAATAGAGAGCTGTTGCCGTGAATTTGCATACTTATCATGTGTGACCAGACACTTGAAAGAATGCCATGAAGGTGAAGCTCCTCCTGAAGAATGTCAGAAGCAGTTTGTTTGCCCCGAAGATGGATGTGGGAAGGTTTTCAGATATGCCTCCAGACTGCAAAAGCATGAGGGCTCCCATGGTCTGTTTCTTATTCTTTCTTTATAAGCACTAAATATTAACCGTTTGTTTTGACACATTCATGTATTAATTTCAAGTTTTATTATACTATAGTTAAGCTAGACTCAATAGAGGCATGTTGTACTGAACCGGGTTGCCTCAAAACATTTACCAACAAGCAATGTCTGAGGGCTCATATGCAGACCTGCCACCAATACGTGAAATGTGAGATTTGTGGGGAAAAGAAATTAAGAAAGAACTTGAAGCAACATCTACGACAAAAGCATGAAAGTGAAGGTCCTCTGGAGGCAATTCCATGCACGTATGAGGGCTGCAGCAAGGTTTTTTCAACAGTAAGTAGCAGAGTCTTTGCAAATCCCTAACTGGGTATTGTTAAAGTGCCTTTTAGCTGAGCTATAGGGAGGATTTGTAATGAATAGCGTTCCTGTTTATTTAGATAGGATGAGATCTTTGACAAGATCCACATTTTTGGTTTCTCAGGCTTCAAATCTCCAGCAACACACGAAGGTCGTGCATCTGGGACAGAAGCCTTTTGCATGTTGTTTCCCTGGTTGTGGCATGAGATTTGGGTACAAGCATGTGAGAGACAACCATGAGAAAAGTGGGCACCATGTTTACACTAATGTAAGTCATTTGGTTAGCTCACAAGTATTTGTGTAGTCTTGACCTTCATGTAGATTTACTAAAAAAGTGTGTGGAATCAGGGGGATTTTGAAGCAGCCGATGAACAATTCCGCTCAAAGCCAAGGGGAGGGCGAAAAAGAATCTGTCCAACGGTTGAAATGCTCATAAGGAAGAGGGTTACCCCCCCAAGTGACTTGGATTTCATGATGGAGTGAGTATTAGTTTCGTCTTATTTGGATTTAAGGGTGAATCAAGCCAACCTCCCCACCCCTTTGTTACTTATCCATGTCGACTGAAAGTAATTGATAGCTAACCAATGTATAGAATCTGTAAGTAGAAATATAAGCCCACCACTTACCTCTAGCAAAATGGAGTAGTTATACATGTACCTTTTGTGCTCGTTGGCAGTAAAATATGGAAGGTTCTTTTTTAGTAGTTCCGGTTGAGGCTTTGCATTCTCATTTTCTTTTAGTTCCTTGAACCTCGTTTGCTTGGCTTGGCATCGTCTATTCGTGTGGTCAATTGAGAACCACTTCTAACCTTTTTTTAGTTACCAATAAACATTTTACTGTTCGATTTTTC

mRNA sequence

AGAAGAAGACAGACCCAACCGCCGAAATCTCCTTGAATTCGCTCTTTCTTCTCTTGTTCCCGCCGACGCTCACCGCCACTCTAACCCTTCCATCTCCCTGTTGGTTCGACCAACTTTAAAATAAGATGGAGATCGATAAACATAATGATGAGGGAGATGATAAAACAAAATACGGTAAACTCAATATTTGCCAGCAATGTGGCGCCGCGTTCAGAAAGCCTGCTTACTTGAAGCAACATATGCAAAGCCATTCTCTCGAGGAACAAATCCTTAAATATAATAAATGAATGTGAAAGATCCTGGATATCTCAGCGTGAAGCATTGGATCCCACATTAAGAACTCCAAAATGCATGAGGCTGGATTTTGTCGTTGCTTGACTGGATCAGTATCAGGTTGGGAGACCACCTGAGAAGCTCCATCAAGTGGGCCTCGGTCACGCTACAGTAGTTTGAGAGGTCATATGTTTGTTCCATAGATGGTTGTAATGCTAGTTATAGAAGGAAGGATCATTTGACCCGCCACCTTCTCCATCACCAAGGAACCATGTTCAAATGTCCAATAGAGAGCTGTTGCCGTGAATTTGCATACTTATCATGTGTGACCAGACACTTGAAAGAATGCCATGAAGGTGAAGCTCCTCCTGAAGAATGTCAGAAGCAGTTTGTTTGCCCCGAAGATGGATGTGGGAAGGTTTTCAGATATGCCTCCAGACTGCAAAAGCATGAGGGCTCCCATGTTAAGCTAGACTCAATAGAGGCATGTTGTACTGAACCGGGTTGCCTCAAAACATTTACCAACAAGCAATGTCTGAGGGCTCATATGCAGACCTGCCACCAATACGTGAAATGTGAGATTTGTGGGGAAAAGAAATTAAGAAAGAACTTGAAGCAACATCTACGACAAAAGCATGAAAGTGAAGGTCCTCTGGAGGCAATTCCATGCACGTATGAGGGCTGCAGCAAGGTTTTTTCAACAGCTTCAAATCTCCAGCAACACACGAAGGTCGTGCATCTGGGACAGAAGCCTTTTGCATGTTGTTTCCCTGGTTGTGGCATGAGATTTGGGTACAAGCATGTGAGAGACAACCATGAGAAAAGTGGGCACCATGTTTACACTAATGGGGATTTTGAAGCAGCCGATGAACAATTCCGCTCAAAGCCAAGGGGAGGGCGAAAAAGAATCTGTCCAACGGTTGAAATGCTCATAAGGAAGAGGGTTACCCCCCCAAGTGACTTGGATTTCATGATGGAGTGAGTATTAGTTTCGTCTTATTTGGATTTAAGGGTGAATCAAGCCAACCTCCCCACCCCTTTGTTACTTATCCATGTCGACTGAAAGTAATTGATAGCTAACCAATGTATAGAATCTGTAAGTAGAAATATAAGCCCACCACTTACCTCTAGCAAAATGGAGTAGTTATACATGTACCTTTTGTGCTCGTTGGCAGTAAAATATGGAAGGTTCTTTTTTAGTAGTTCCGGTTGAGGCTTTGCATTCTCATTTTCTTTTAGTTCCTTGAACCTCGTTTGCTTGGCTTGGCATCGTCTATTCGTGTGGTCAATTGAGAACCACTTCTAACCTTTTTTTAGTTACCAATAAACATTTTACTGTTCGATTTTTC

Coding sequence (CDS)

ATGTTCAAATGTCCAATAGAGAGCTGTTGCCGTGAATTTGCATACTTATCATGTGTGACCAGACACTTGAAAGAATGCCATGAAGGTGAAGCTCCTCCTGAAGAATGTCAGAAGCAGTTTGTTTGCCCCGAAGATGGATGTGGGAAGGTTTTCAGATATGCCTCCAGACTGCAAAAGCATGAGGGCTCCCATGTTAAGCTAGACTCAATAGAGGCATGTTGTACTGAACCGGGTTGCCTCAAAACATTTACCAACAAGCAATGTCTGAGGGCTCATATGCAGACCTGCCACCAATACGTGAAATGTGAGATTTGTGGGGAAAAGAAATTAAGAAAGAACTTGAAGCAACATCTACGACAAAAGCATGAAAGTGAAGGTCCTCTGGAGGCAATTCCATGCACGTATGAGGGCTGCAGCAAGGTTTTTTCAACAGCTTCAAATCTCCAGCAACACACGAAGGTCGTGCATCTGGGACAGAAGCCTTTTGCATGTTGTTTCCCTGGTTGTGGCATGAGATTTGGGTACAAGCATGTGAGAGACAACCATGAGAAAAGTGGGCACCATGTTTACACTAATGGGGATTTTGAAGCAGCCGATGAACAATTCCGCTCAAAGCCAAGGGGAGGGCGAAAAAGAATCTGTCCAACGGTTGAAATGCTCATAAGGAAGAGGGTTACCCCCCCAAGTGACTTGGATTTCATGATGGAGTGA

Protein sequence

MFKCPIESCCREFAYLSCVTRHLKECHEGEAPPEECQKQFVCPEDGCGKVFRYASRLQKHEGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKLRKNLKQHLRQKHESEGPLEAIPCTYEGCSKVFSTASNLQQHTKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSGHHVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPSDLDFMME
BLAST of MELO3C012480.2 vs. NCBI nr
Match: XP_008446968.1 (PREDICTED: transcription factor IIIA [Cucumis melo])

HSP 1 Score: 518.1 bits (1333), Expect = 1.6e-143
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0

Query: 1   MFKCPIESCCREFAYLSCVTRHLKECHEGEAPPEECQKQFVCPEDGCGKVFRYASRLQKH 60
           MFKCPIESCCREFAYLSCVTRHLKECHEGEAPPEECQKQFVCPEDGCGKVFRYASRLQKH
Sbjct: 76  MFKCPIESCCREFAYLSCVTRHLKECHEGEAPPEECQKQFVCPEDGCGKVFRYASRLQKH 135

Query: 61  EGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKLRKNLKQHLRQ 120
           EGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKLRKNLKQHLRQ
Sbjct: 136 EGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKLRKNLKQHLRQ 195

Query: 121 KHESEGPLEAIPCTYEGCSKVFSTASNLQQHTKVVHLGQKPFACCFPGCGMRFGYKHVRD 180
           KHESEGPLEAIPCTYEGCSKVFSTASNLQQHTKVVHLGQKPFACCFPGCGMRFGYKHVRD
Sbjct: 196 KHESEGPLEAIPCTYEGCSKVFSTASNLQQHTKVVHLGQKPFACCFPGCGMRFGYKHVRD 255

Query: 181 NHEKSGHHVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPSDLDFMME 237
           NHEKSGHHVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPSDLDFMME
Sbjct: 256 NHEKSGHHVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPSDLDFMME 311

BLAST of MELO3C012480.2 vs. NCBI nr
Match: KGN52327.1 (hypothetical protein Csa_5G623900 [Cucumis sativus])

HSP 1 Score: 461.5 bits (1186), Expect = 1.8e-126
Identity = 216/246 (87.80%), Postives = 218/246 (88.62%), Query Frame = 0

Query: 1   MFKCPIESCCREFAYLSCVTRHLKECHEGEAPP----------EECQKQFVCPEDGCGKV 60
           MFKCPIESCCREFAY SCV+RHLKECHEGE PP                      GCGKV
Sbjct: 153 MFKCPIESCCREFAYASCVSRHLKECHEGEVPPXXXXXXXXXXXXXXXXXXXXXXGCGKV 212

Query: 61  FRYASRLQKHEGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKL 120
           FRYASRLQKHEGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKL
Sbjct: 213 FRYASRLQKHEGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKL 272

Query: 121 RKNLKQHLRQKHESEGPLEAIPCTYEGCSKVFSTASNLQQHTKVVHLGQKPFACCFPGCG 180
           RKNLKQHLRQKHESEGPLEAIPCTYEGCSKVFSTASNLQQH KVVHL QKPF CCFPGCG
Sbjct: 273 RKNLKQHLRQKHESEGPLEAIPCTYEGCSKVFSTASNLQQHMKVVHLEQKPFVCCFPGCG 332

Query: 181 MRFGYKHVRDNHEKSGHHVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPSD 237
           MRFGYKHVRDNHEKSG HVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPS+
Sbjct: 333 MRFGYKHVRDNHEKSGQHVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPSE 392

BLAST of MELO3C012480.2 vs. NCBI nr
Match: XP_004142387.2 (PREDICTED: zinc finger X-linked protein ZXDB [Cucumis sativus])

HSP 1 Score: 461.5 bits (1186), Expect = 1.8e-126
Identity = 216/246 (87.80%), Postives = 218/246 (88.62%), Query Frame = 0

Query: 1   MFKCPIESCCREFAYLSCVTRHLKECHEGEAPP----------EECQKQFVCPEDGCGKV 60
           MFKCPIESCCREFAY SCV+RHLKECHEGE PP                      GCGKV
Sbjct: 76  MFKCPIESCCREFAYASCVSRHLKECHEGEVPPXXXXXXXXXXXXXXXXXXXXXXGCGKV 135

Query: 61  FRYASRLQKHEGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKL 120
           FRYASRLQKHEGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKL
Sbjct: 136 FRYASRLQKHEGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKL 195

Query: 121 RKNLKQHLRQKHESEGPLEAIPCTYEGCSKVFSTASNLQQHTKVVHLGQKPFACCFPGCG 180
           RKNLKQHLRQKHESEGPLEAIPCTYEGCSKVFSTASNLQQH KVVHL QKPF CCFPGCG
Sbjct: 196 RKNLKQHLRQKHESEGPLEAIPCTYEGCSKVFSTASNLQQHMKVVHLEQKPFVCCFPGCG 255

Query: 181 MRFGYKHVRDNHEKSGHHVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPSD 237
           MRFGYKHVRDNHEKSG HVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPS+
Sbjct: 256 MRFGYKHVRDNHEKSGQHVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPSE 315

BLAST of MELO3C012480.2 vs. NCBI nr
Match: XP_022139243.1 (transcription factor IIIA isoform X1 [Momordica charantia])

HSP 1 Score: 379.4 bits (973), Expect = 8.8e-102
Identity = 175/236 (74.15%), Postives = 196/236 (83.05%), Query Frame = 0

Query: 1   MFKCPIESCCREFAYLSCVTRHLKECHEGEAPPE-ECQKQFVCPEDGCGKVFRYASRLQK 60
           +FKCPI              RH K  HE +A PE +C+KQFVCPEDGCGKVFRY S+LQK
Sbjct: 118 VFKCPIXXXXXXXXXXXXXKRHWKNFHEDDARPEAKCEKQFVCPEDGCGKVFRYGSQLQK 177

Query: 61  HEGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKLRKNLKQHLR 120
           HE SHVKLDSIEA C EPGC++ FTNKQCL+AH+Q+CHQY+KCEICG +KLRKN+K+HLR
Sbjct: 178 HEDSHVKLDSIEAYCAEPGCMRPFTNKQCLKAHIQSCHQYIKCEICGSEKLRKNIKRHLR 237

Query: 121 QKHESEGPLEAIPCTYEGCSKVFSTASNLQQHTKVVHLGQKPFACCFPGCGMRFGYKHVR 180
            KHESEGP + I C +EGCSKVFST SNL+QH KVVHL QKPF C F GCGMRFGY+HVR
Sbjct: 238 -KHESEGPQKIIQCPHEGCSKVFSTDSNLRQHMKVVHLEQKPFECSFSGCGMRFGYRHVR 297

Query: 181 DNHEKSGHHVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPSDLDFMM 236
           DNHE+SGHHVY NGDFE ADEQFRSKPRGGRKR CPTVEMLIRKRVTPPS+LDFM+
Sbjct: 298 DNHERSGHHVYINGDFEVADEQFRSKPRGGRKRKCPTVEMLIRKRVTPPSELDFML 352

BLAST of MELO3C012480.2 vs. NCBI nr
Match: XP_022139244.1 (transcription factor IIIA isoform X2 [Momordica charantia])

HSP 1 Score: 362.1 bits (928), Expect = 1.5e-96
Identity = 169/236 (71.61%), Postives = 190/236 (80.51%), Query Frame = 0

Query: 1   MFKCPIESCCREFAYLSCVTRHLKECHEGEAPPE-ECQKQFVCPEDGCGKVFRYASRLQK 60
           +FKCPI              RH K  HE +A PE +C+KQFVCPEDGCGKVFRY S+LQK
Sbjct: 118 VFKCPIXXXXXXXXXXXXXKRHWKNFHEDDARPEAKCEKQFVCPEDGCGKVFRYGSQLQK 177

Query: 61  HEGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKLRKNLKQHLR 120
           HE SH      EA C EPGC++ FTNKQCL+AH+Q+CHQY+KCEICG +KLRKN+K+HLR
Sbjct: 178 HEDSH------EAYCAEPGCMRPFTNKQCLKAHIQSCHQYIKCEICGSEKLRKNIKRHLR 237

Query: 121 QKHESEGPLEAIPCTYEGCSKVFSTASNLQQHTKVVHLGQKPFACCFPGCGMRFGYKHVR 180
            KHESEGP + I C +EGCSKVFST SNL+QH KVVHL QKPF C F GCGMRFGY+HVR
Sbjct: 238 -KHESEGPQKIIQCPHEGCSKVFSTDSNLRQHMKVVHLEQKPFECSFSGCGMRFGYRHVR 297

Query: 181 DNHEKSGHHVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPSDLDFMM 236
           DNHE+SGHHVY NGDFE ADEQFRSKPRGGRKR CPTVEMLIRKRVTPPS+LDFM+
Sbjct: 298 DNHERSGHHVYINGDFEVADEQFRSKPRGGRKRKCPTVEMLIRKRVTPPSELDFML 346

BLAST of MELO3C012480.2 vs. TAIR10
Match: AT1G72050.2 (transcription factor IIIA)

HSP 1 Score: 264.2 bits (674), Expect = 7.5e-71
Identity = 132/282 (46.81%), Postives = 164/282 (58.16%), Query Frame = 0

Query: 1   MFKCPIESCCREFAYLSCVTRHLKECHEGEAPPEE------------------------- 60
           +FKCP E+C  EF+    V RH+K+ H  +   ++                         
Sbjct: 122 LFKCPKENCKSEFSVQGNVGRHVKKYHSNDNRDKDNTGLGXXXXXXXXXXXXXXXXXXXX 181

Query: 61  -----------------------------CQKQFVCPEDGCGKVFRYASRLQKHEGSHVK 120
                                           Q VC E GCGK F+Y S+LQKH+ SHVK
Sbjct: 182 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVCKEIGCGKAFKYPSQLQKHQDSHVK 241

Query: 121 LDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKLRKNLKQHLRQKHESEG 180
           LDS+EA C+EPGC+K FTN++CL++H+++CHQ++ CEICG K L+KN+K+HLR   E   
Sbjct: 242 LDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHINCEICGSKHLKKNIKRHLRTHDEDSS 301

Query: 181 PLEAIPCTYEGCSKVFSTASNLQQHTKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSG 229
           P E I C  EGCS  FS ASNLQ+H K VH   +PF C FPGCGMRF YKHVR+ HE SG
Sbjct: 302 PGE-IKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHENSG 361

BLAST of MELO3C012480.2 vs. Swiss-Prot
Match: sp|Q84MZ4|TF3A_ARATH (Transcription factor IIIA OS=Arabidopsis thaliana OX=3702 GN=TFIIIA PE=1 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.4e-69
Identity = 132/282 (46.81%), Postives = 164/282 (58.16%), Query Frame = 0

Query: 1   MFKCPIESCCREFAYLSCVTRHLKECHEGEAPPEE------------------------- 60
           +FKCP E+C  EF+    V RH+K+ H  +   ++                         
Sbjct: 122 LFKCPKENCKSEFSVQGNVGRHVKKYHSNDNRDKDNTGLGXXXXXXXXXXXXXXXXXXXX 181

Query: 61  -----------------------------CQKQFVCPEDGCGKVFRYASRLQKHEGSHVK 120
                                           Q VC E GCGK F+Y S+LQKH+ SHVK
Sbjct: 182 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVVCKEIGCGKAFKYPSQLQKHQDSHVK 241

Query: 121 LDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKLRKNLKQHLRQKHESEG 180
           LDS+EA C+EPGC+K FTN++CL++H+++CHQ++ CEICG K L+KN+K+HLR   E   
Sbjct: 242 LDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHINCEICGSKHLKKNIKRHLRTHDEDSS 301

Query: 181 PLEAIPCTYEGCSKVFSTASNLQQHTKVVHLGQKPFACCFPGCGMRFGYKHVRDNHEKSG 229
           P E I C  EGCS  FS ASNLQ+H K VH   +PF C FPGCGMRF YKHVR+ HE SG
Sbjct: 302 PGE-IKCEVEGCSSTFSKASNLQKHMKAVHDDIRPFVCGFPGCGMRFAYKHVRNKHENSG 361

BLAST of MELO3C012480.2 vs. Swiss-Prot
Match: sp|P79797|TF3A_ICTPU (Transcription factor IIIA OS=Ictalurus punctatus OX=7998 GN=gtf3a PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.1e-06
Identity = 45/184 (24.46%), Postives = 69/184 (37.50%), Query Frame = 0

Query: 7   ESCCREFAYLSCVTRHLKECHEGEAPPEECQKQFVCPEDGCGKVFRYASRLQKHEGSHVK 66
           + C   F   + +  H++  H+ +      +K +VC  +GC K FR   +L+ H+  H+ 
Sbjct: 75  DGCSESFISTAGLKNHVERVHQHK------EKHYVCDYEGCAKEFRKKKQLRSHKCEHMN 134

Query: 67  LDSIEAC-------------------------CTEPGCLKTFTNKQCLRAHMQTCH-QYV 126
                                           C E GC          +AH +  H + +
Sbjct: 135 QLXXXXXXXXXXXXXXXXXXXXXXXXXXDVYPCAEEGCDFQGRMWTEYQAHRKAAHREAL 194

Query: 127 KCEICGEKKLRKN--LKQHLRQKHESEGPLEAIPCTYEGCSKVFSTASNLQQHTKVVHLG 163
           +C+ C  K   K   LK+H    H   G      CT EGC K ++T  NLQ H    H G
Sbjct: 195 QCDSCA-KVFHKAWFLKKHKLFVH--LGVRRVFKCTKEGCQKTYTTHFNLQNHILSFHEG 249

BLAST of MELO3C012480.2 vs. Swiss-Prot
Match: sp|Q96CK0|ZN653_HUMAN (Zinc finger protein 653 OS=Homo sapiens OX=9606 GN=ZNF653 PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.6e-06
Identity = 24/66 (36.36%), Postives = 35/66 (53.03%), Query Frame = 0

Query: 108 KKLRKNLKQHLRQKHESEGPLEAIPCTYEGCSKVFSTASNLQQHTKVVHLGQKPFACCFP 167
           K+  K  +    +  +++G LE   C YEGCS+V+   S+ Q H  +VH   K   C  P
Sbjct: 444 KEPEKRRRSKRSRVMDADGLLEMFHCPYEGCSQVYVALSSFQNHVNLVHRKGKTKVCPHP 503

Query: 168 GCGMRF 174
           GCG +F
Sbjct: 504 GCGKKF 509

BLAST of MELO3C012480.2 vs. Swiss-Prot
Match: sp|Q6YND2|ZN653_MOUSE (Zinc finger protein 653 OS=Mus musculus OX=10090 GN=Znf653 PE=2 SV=2)

HSP 1 Score: 53.5 bits (127), Expect = 3.6e-06
Identity = 24/66 (36.36%), Postives = 35/66 (53.03%), Query Frame = 0

Query: 108 KKLRKNLKQHLRQKHESEGPLEAIPCTYEGCSKVFSTASNLQQHTKVVHLGQKPFACCFP 167
           K+  K  +    +  +++G LE   C YEGCS+V+   S+ Q H  +VH   K   C  P
Sbjct: 444 KEPEKRRRSKRSRVMDADGLLEMFHCPYEGCSQVYVALSSFQNHVNLVHRKGKTKVCPHP 503

Query: 168 GCGMRF 174
           GCG +F
Sbjct: 504 GCGKKF 509

BLAST of MELO3C012480.2 vs. Swiss-Prot
Match: sp|Q9VH70|TOPI_DROME (Testis-specific zinc finger protein topi OS=Drosophila melanogaster OX=7227 GN=topi PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.0e-04
Identity = 38/138 (27.54%), Postives = 56/138 (40.58%), Query Frame = 0

Query: 38  KQFVCPEDGCGKVFRYASRLQKH-EGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTC 97
           K+ + P D C   F +A     H E  H+               K    K+         
Sbjct: 463 KKLLLPCDFCDVNFEFAHDFLAHSEEKHLN--------------KKKREKETRNTGAGRI 522

Query: 98  HQYVKCEICGEKKLR-KNLKQHLRQKHESEGPLEAIPCTYEGCSKVFSTASNLQQHTKVV 157
            QY+ C+ICG+   +  +L QHLR  H+   P     C  E C + F+   +L  H +  
Sbjct: 523 RQYL-CDICGKSYTQSSHLWQHLR-FHQGVKP---FVCQEENCDRKFTIRPDLNDHIRKC 579

Query: 158 HLGQKPFACCFPGCGMRF 174
           H G++P+ C    CG RF
Sbjct: 583 HTGERPYLCLV--CGKRF 579

BLAST of MELO3C012480.2 vs. TrEMBL
Match: tr|A0A1S3BH74|A0A1S3BH74_CUCME (transcription factor IIIA OS=Cucumis melo OX=3656 GN=LOC103489521 PE=4 SV=1)

HSP 1 Score: 518.1 bits (1333), Expect = 1.1e-143
Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 0

Query: 1   MFKCPIESCCREFAYLSCVTRHLKECHEGEAPPEECQKQFVCPEDGCGKVFRYASRLQKH 60
           MFKCPIESCCREFAYLSCVTRHLKECHEGEAPPEECQKQFVCPEDGCGKVFRYASRLQKH
Sbjct: 76  MFKCPIESCCREFAYLSCVTRHLKECHEGEAPPEECQKQFVCPEDGCGKVFRYASRLQKH 135

Query: 61  EGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKLRKNLKQHLRQ 120
           EGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKLRKNLKQHLRQ
Sbjct: 136 EGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKLRKNLKQHLRQ 195

Query: 121 KHESEGPLEAIPCTYEGCSKVFSTASNLQQHTKVVHLGQKPFACCFPGCGMRFGYKHVRD 180
           KHESEGPLEAIPCTYEGCSKVFSTASNLQQHTKVVHLGQKPFACCFPGCGMRFGYKHVRD
Sbjct: 196 KHESEGPLEAIPCTYEGCSKVFSTASNLQQHTKVVHLGQKPFACCFPGCGMRFGYKHVRD 255

Query: 181 NHEKSGHHVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPSDLDFMME 237
           NHEKSGHHVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPSDLDFMME
Sbjct: 256 NHEKSGHHVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPSDLDFMME 311

BLAST of MELO3C012480.2 vs. TrEMBL
Match: tr|A0A0A0KV54|A0A0A0KV54_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623900 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 1.2e-126
Identity = 216/246 (87.80%), Postives = 218/246 (88.62%), Query Frame = 0

Query: 1   MFKCPIESCCREFAYLSCVTRHLKECHEGEAPP----------EECQKQFVCPEDGCGKV 60
           MFKCPIESCCREFAY SCV+RHLKECHEGE PP                      GCGKV
Sbjct: 153 MFKCPIESCCREFAYASCVSRHLKECHEGEVPPXXXXXXXXXXXXXXXXXXXXXXGCGKV 212

Query: 61  FRYASRLQKHEGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKL 120
           FRYASRLQKHEGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKL
Sbjct: 213 FRYASRLQKHEGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKL 272

Query: 121 RKNLKQHLRQKHESEGPLEAIPCTYEGCSKVFSTASNLQQHTKVVHLGQKPFACCFPGCG 180
           RKNLKQHLRQKHESEGPLEAIPCTYEGCSKVFSTASNLQQH KVVHL QKPF CCFPGCG
Sbjct: 273 RKNLKQHLRQKHESEGPLEAIPCTYEGCSKVFSTASNLQQHMKVVHLEQKPFVCCFPGCG 332

Query: 181 MRFGYKHVRDNHEKSGHHVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPSD 237
           MRFGYKHVRDNHEKSG HVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPS+
Sbjct: 333 MRFGYKHVRDNHEKSGQHVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPSE 392

BLAST of MELO3C012480.2 vs. TrEMBL
Match: tr|A0A2P5CW95|A0A2P5CW95_PARAD (TFIIH C1-like domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_118300 PE=4 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 6.3e-88
Identity = 150/234 (64.10%), Postives = 183/234 (78.21%), Query Frame = 0

Query: 1   MFKCPIESCCREFAYLSCVTRHLKECHEGEAP--PEECQKQFVCPEDGCGKVFRYASRLQ 60
           +FKCP E+C REF+    + RH+KE H G+ P    E +KQ+VC E  CGK FR+AS+L+
Sbjct: 119 LFKCPTENCKREFSIQGNMKRHVKEQHNGDHPSTSTESEKQYVCQEASCGKAFRFASKLR 178

Query: 61  KHEGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKLRKNLKQHL 120
           KHE SHVKL+S+EA C EPGC+K FTN+Q L+ H+ +CHQ++ CEICG K+L+KNLK+HL
Sbjct: 179 KHEDSHVKLESVEAVCAEPGCMKIFTNEQYLKEHIHSCHQHITCEICGTKQLKKNLKRHL 238

Query: 121 RQKHESEGPLEAIPCTYEGCSKVFSTASNLQQHTKVVHLGQKPFACCFPGCGMRFGYKHV 180
           R  HE +GP E+I C Y+GC + FST SNL QH K  HL QKPF C F GCGMRF YKHV
Sbjct: 239 R-THEEKGPFESIKCMYKGCDRSFSTKSNLSQHVKAAHLKQKPFVCSFSGCGMRFSYKHV 298

Query: 181 RDNHEKSGHHVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPSDLD 233
           RDNHEK+G HVYT+GDFE ADEQFRS+PRGGRKR  PTVEML+RKRV+PP+ LD
Sbjct: 299 RDNHEKTGCHVYTHGDFEEADEQFRSRPRGGRKRKYPTVEMLVRKRVSPPNQLD 351

BLAST of MELO3C012480.2 vs. TrEMBL
Match: tr|A0A1R3GTA2|A0A1R3GTA2_9ROSI (Zinc finger, C2H2 OS=Corchorus olitorius OX=93759 GN=COLO4_33458 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.2e-86
Identity = 149/238 (62.61%), Postives = 185/238 (77.73%), Query Frame = 0

Query: 1   MFKCPIESCCREFAYLSCVTRHLKECH--EGEAPPEECQKQFVCPEDGCGKVFRYASRLQ 60
           +FKCP+E+C +EFA+   + RH+KE H  +  +P    Q Q +CPE GCGKVF++AS+L+
Sbjct: 114 LFKCPVENCNKEFAFQGNMKRHVKEFHDEDSSSPDAGTQNQHICPEVGCGKVFKFASQLR 173

Query: 61  KHEGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKLRKNLKQHL 120
           KHE SHVKLDS+EA C+EP C+K FTN+QCLRAH+Q+CHQY+ CEICG K+L+KN+K+HL
Sbjct: 174 KHEDSHVKLDSVEAFCSEPSCMKYFTNEQCLRAHVQSCHQYITCEICGTKQLKKNIKRHL 233

Query: 121 RQKHESEGPLEAIPCTYEGCSKVFSTASNLQQHTKVVHLGQKPFACCFPGCGMRFGYKHV 180
           R  H++   LE I C ++GC   FST SNL+QH K VH   KPFAC F GCGMRF YKHV
Sbjct: 234 R-SHDTGVALERIKCDFQGCPHTFSTKSNLRQHVKAVHENVKPFACSFSGCGMRFSYKHV 293

Query: 181 RDNHEKSGHHVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTPPSDLDFMME 237
           RDNHEKSG H+Y  GDF  +DEQF S+PRGGRKR CPTVEMLIRKRVTPP  +D M++
Sbjct: 294 RDNHEKSGCHIYVPGDFVESDEQFNSRPRGGRKRTCPTVEMLIRKRVTPP-QMDTMID 349

BLAST of MELO3C012480.2 vs. TrEMBL
Match: tr|A0A1R3J245|A0A1R3J245_COCAP (Zinc finger, C2H2 OS=Corchorus capsularis OX=210143 GN=CCACVL1_08120 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.3e-85
Identity = 151/229 (65.94%), Postives = 179/229 (78.17%), Query Frame = 0

Query: 1   MFKCPIESCCREFAYLSCVTRHLKECH--EGEAPPEECQKQFVCPEDGCGKVFRYASRLQ 60
           +FKCPIE+C REFA+   +TRH+KE H  +  +P    QKQ VC E GCGKVF++AS+L+
Sbjct: 113 LFKCPIENCNREFAFQGNMTRHVKEFHDEDSSSPAAGSQKQHVCQEIGCGKVFKFASKLK 172

Query: 61  KHEGSHVKLDSIEACCTEPGCLKTFTNKQCLRAHMQTCHQYVKCEICGEKKLRKNLKQHL 120
           KHE SHVKLDS+EA C+EP C+K FTN+QCL+AH+Q+CH+Y+ CEICG+K+  KN+K+HL
Sbjct: 173 KHEDSHVKLDSVEAFCSEPSCMKYFTNEQCLKAHVQSCHRYINCEICGKKQREKNIKRHL 232

Query: 121 RQKHESEGPLEAIPCTYEGCSKVFSTASNLQQHTKVVHLGQKPFACCFPGCGMRFGYKHV 180
           R  HE   P   I C +EGC   FST SNL QH KVVH   KPFACCF GCGMRF YKHV
Sbjct: 233 R-SHELGVPSGRIKCDFEGCLHTFSTKSNLCQHVKVVHEELKPFACCFSGCGMRFSYKHV 292

Query: 181 RDNHEKSGHHVYTNGDFEAADEQFRSKPRGGRKRICPTVEMLIRKRVTP 228
           RDNHEKSG HVY  GDFE +DEQF+S+PRGGRKR  PTVEMLIRKRVTP
Sbjct: 293 RDNHEKSGCHVYVAGDFEESDEQFQSRPRGGRKRTFPTVEMLIRKRVTP 340

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_008446968.11.6e-143100.00PREDICTED: transcription factor IIIA [Cucumis melo][more]
KGN52327.11.8e-12687.80hypothetical protein Csa_5G623900 [Cucumis sativus][more]
XP_004142387.21.8e-12687.80PREDICTED: zinc finger X-linked protein ZXDB [Cucumis sativus][more]
XP_022139243.18.8e-10274.15transcription factor IIIA isoform X1 [Momordica charantia][more]
XP_022139244.11.5e-9671.61transcription factor IIIA isoform X2 [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT1G72050.27.5e-7146.81transcription factor IIIA[more]
Match NameE-valueIdentityDescription
sp|Q84MZ4|TF3A_ARATH1.4e-6946.81Transcription factor IIIA OS=Arabidopsis thaliana OX=3702 GN=TFIIIA PE=1 SV=1[more]
sp|P79797|TF3A_ICTPU2.1e-0624.46Transcription factor IIIA OS=Ictalurus punctatus OX=7998 GN=gtf3a PE=2 SV=1[more]
sp|Q96CK0|ZN653_HUMAN3.6e-0636.36Zinc finger protein 653 OS=Homo sapiens OX=9606 GN=ZNF653 PE=1 SV=1[more]
sp|Q6YND2|ZN653_MOUSE3.6e-0636.36Zinc finger protein 653 OS=Mus musculus OX=10090 GN=Znf653 PE=2 SV=2[more]
sp|Q9VH70|TOPI_DROME2.0e-0427.54Testis-specific zinc finger protein topi OS=Drosophila melanogaster OX=7227 GN=t... [more]
Match NameE-valueIdentityDescription
tr|A0A1S3BH74|A0A1S3BH74_CUCME1.1e-143100.00transcription factor IIIA OS=Cucumis melo OX=3656 GN=LOC103489521 PE=4 SV=1[more]
tr|A0A0A0KV54|A0A0A0KV54_CUCSA1.2e-12687.80Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623900 PE=4 SV=1[more]
tr|A0A2P5CW95|A0A2P5CW95_PARAD6.3e-8864.10TFIIH C1-like domain containing protein OS=Parasponia andersonii OX=3476 GN=PanW... [more]
tr|A0A1R3GTA2|A0A1R3GTA2_9ROSI1.2e-8662.61Zinc finger, C2H2 OS=Corchorus olitorius OX=93759 GN=COLO4_33458 PE=4 SV=1[more]
tr|A0A1R3J245|A0A1R3J245_COCAP1.3e-8565.94Zinc finger, C2H2 OS=Corchorus capsularis OX=210143 GN=CCACVL1_08120 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR013087Znf_C2H2_type
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0046872 metal ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C012480.2.1MELO3C012480.2.1mRNA


Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 2..27
e-value: 5.9
score: 15.3
coord: 100..122
e-value: 5.6
score: 15.5
coord: 131..156
e-value: 0.0012
score: 28.1
coord: 40..64
e-value: 6.8E-4
score: 28.9
coord: 162..187
e-value: 11.0
score: 12.8
coord: 72..97
e-value: 0.55
score: 19.3
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 74..97
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 133..156
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 42..64
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 4..27
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 2..32
score: 11.697
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 131..161
score: 13.588
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 40..69
score: 10.762
NoneNo IPR availablePFAMPF00096zf-C2H2coord: 40..64
e-value: 0.0011
score: 19.2
coord: 132..156
e-value: 1.7E-4
score: 21.8
NoneNo IPR availableGENE3DG3DSA:3.30.160.60coord: 128..206
e-value: 2.3E-11
score: 45.8
coord: 37..122
e-value: 1.4E-7
score: 33.6
NoneNo IPR availablePANTHERPTHR45373FAMILY NOT NAMEDcoord: 1..232
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 112..166
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 37..65