MELO3C011832 (gene) Melon (DHL92) v3.5.1

NameMELO3C011832
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionRetrotransposon protein, putative, Ty3-gypsy subclass
Locationchr10 : 4485863 .. 4486030 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTAAGTTTGAGGAACGGAAGATTCTTTTCGGGCAGAAACAACAAGAAAGTTTTGAAAGTATTAAGGAGAAGCTCAGTAGTAGTCCTGTTTTGAAGCTACCGGATTTTTCAGCTCTATTTGAGGTTGCGTGGATGCTTGTGGACTTGGCATTGGTGGATTTCTAG

mRNA sequence

ATGACTAAGTTTGAGGAACGGAAGATTCTTTTCGGGCAGAAACAACAAGAAAGTTTTGAAAGTATTAAGGAGAAGCTCAGTAGTAGTCCTGTTTTGAAGCTACCGGATTTTTCAGCTCTATTTGAGGTTGCGTGGATGCTTGTGGACTTGGCATTGGTGGATTTCTAG

Coding sequence (CDS)

ATGACTAAGTTTGAGGAACGGAAGATTCTTTTCGGGCAGAAACAACAAGAAAGTTTTGAAAGTATTAAGGAGAAGCTCAGTAGTAGTCCTGTTTTGAAGCTACCGGATTTTTCAGCTCTATTTGAGGTTGCGTGGATGCTTGTGGACTTGGCATTGGTGGATTTCTAG

Protein sequence

MTKFEERKILFGQKQQESFESIKEKLSSSPVLKLPDFSALFEVAWMLVDLALVDF*
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU59128melon EST collection version 4.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C011832T1MELO3C011832T1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU59128MU59128transcribed_cluster


Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownSSF56672DNA/RNA polymerasescoord: 8..51
score: 2.3