MELO3C011069 (gene) Melon (DHL92) v3.5.1

Overview
NameMELO3C011069
Typegene
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionDivalent-cation tolerance protein CutA
Locationchr3 : 26687282 .. 26691478 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GACGGGGCGTCGAAAAGGCGCGACACGAAAATAGCGCTATAAAAACAGAAAATGGCTTTCACTCTTAGCAGCAGAGCCGCGACACCATTGATATCGTGCTTTGCACTACGTCGTCGTTTACCTCTGGTTGGTGCGTTTTGCGTACTAAGCTTCGGAATCTCCAATCTCTTCGTCTCCAAAACGGGTTCTGCTCTGTCTGTGCCTTTCGTCCCTCTCTTGAGGTACTTCTTTTCGCTTCCTTGCTTTCTTTCTTCATCAATTTATTCAACGATTGTTTCTTTCTTTGATTTTTCTTTAGTCGTTGGTTAATTTGTTTAGTTTAATTGTTTAATCCGTGTTTTTGTTGGTTTGCTAATGGAAAATGAATGTCAGATCGAAGCTTGCTGGTCAAGGTCCAGCTAGGAACGTACATTTGATAAAAATGGAAGGGAGTAGTGCTGCGGTGCCTAGCATTGTTGTTTATGTCACTGTTCCTAACAGGGAAGCAGGTTCTCTTTGATCTCTATGCTCTAGAAATCTCGCGTGATTTGTTGTTCTGAATTCATTGATCATTCTTTGGTATTTTGTGTTATGGAGTATGGACCAACTATAATCGGATTAGAATAGGATAGTTTTAGTAGCTGTTAGTCAATCAAGTGACCAACAAATCAGGCTCTTCTAGCAGCGGTATATAAGCTGTAGTTGATGGTAACACGGTGGTACGTTGATCAAATAGCATGGGGAATTGGGTATTGACGATATAGTTTCACTATTTTACTTGTTATGCTAGTCACATCTTCACTGTAAGGAGAGTTTTTGGGGGAATCTTATGTTGGCTACTGATGGTGTTGATTATTGAGTATTGATAGGATCTTGTTGATTATGAGTTGGATATATATACTTGGCGCATTGGGCAAATAATTATCAGACTCAATAAGCAAATGATGGATTATATTATAACTCGAGAAATGCACTGATGTTAATTATATATACTATTGTTGAAAATGTAGCATGTTTTTCTATCAAAAAGGATAAAAAAGAACAAAAAATGTGAAGCATGTTTTGGCTTCTGCTGCGTCAAAGAATGCTTATCATGTTCACTTGGATGATTAATGCTCAGAGATAGTAAGGTCTCTTGGTATTCAATGTGGATTATGTTTTATGTTTTCTAATTCACTAAGTTAAATAGATTCTATGAAGATTTGTTTGACATACATGTATATATATTTAAATTGTTTTTGGATTTGTGATCCAAATAGTGGAAATTCTAAAATCTTATGTAATTCAGATTTTAAATTTGAAGTTTTAAAATGGAATTGATATTGAAAAAGAGAATTAAGGTTTAAGTAAATATAGATTTTACGTTCTAAACTCATATATATACTTTTTAAAGTTAAATGGTGTATGACACAATATATTTTTAATTTCTATCTTATTGTAAAATAAAATTTATTCAAAATTGTTGACATAAAACATATTCATAACTTAATTAGTAATAATTGTGTTTTGAGCTAATATTTAGTTTGTAACTACCTGCAACTATTTTTAGAATTATAAATATATTATCAAACTAAGTCTGTACTAATTTTTAAATGAGATCGAACTGCTAAACTAAATACATAATAAAAAATATTGAGAACGTCTACAAAACCTGTTTTGATTGAATTTTTTGTTTTTAGACCATGCACCACCAAACACGCACTAGGAATTCGGAAAAGTCACCCGAGAGTGCAAAGTTAATTTTAAATGCATTTTCTACCCCGTAAAAGAAACAAAACAAGAATGACGAATTTGTAAGCATTTTTGGGCGGCATAGTTCCATTATCGTTATTTTTTAGTTTTGTTATTTTAGTCATGTATTCAATCCATAGTGGTTACCTACCTAGAAACTAGTTTCCTACCAGATTCCTTGACACCCAAATGTTGTAGGACCAAGCGAGTTGTCAGGTGAGATTAGTCGAAGTGCCCGTAAGGTAGCCCAAACACTCACATATATAAAAAAAATTCAACTTCTTTGTTCCGCTTTTATCTATGGTAACAGAACTAGTCCGATCCAATGTTTGGTATTCCAATTGCATTAAGTTACCATGTTTTCTCTGTTGTCTCCACGTACATCTTTATACATTTTATATAGTAAATGACATATCTAACCATGTACTTACTAGCAAGAATTGGATTGATTTTGCCCAAGCTAAATTGTATTGTGTTTCTCAGGACCGAGCACTGAATTTCTTACTATGTGATTTACTTCTCTTTAGTGGACGTATGGTTTATTATCTTTCTCGTTCACATTATTTCTGCAGGTAAGAAACTAGCTGAAAGCATTGTCAAAGAAAAACTTGCTGCTTGTGTTAACATAGTACCCGGTATGTGGGTCTTCTCAACCTCTGCACGTCATCTTAAGTGACAAAAGGCATTGCTCATGGTTTAGAAAAAATATTATGTCGACAAGATTTATAATCCACGCTTGCCGAACATCTGGTATTCTCCTTTAAGTTTTCCTTGCATATCAATGAAGTTGCTTCTAAGTTCTAACTTTTAATATTTAAGATTGAAGCTTACTGGATCTTCCCTGTAATATTTCAGTGGCATTTTTTAGTGAAGGAATCTTGTGGAAATAGTTTACTTTCATCTTGTTGTGAAACAAAATTCCTTTTCTTTTGATCGGTTCTCTTTAGATCTTGTGATTTCATAAAGAAACGCGATGCTTCAAGTTGTTCCACAGCCCTTTTTAATCTTTCAATTTTTTTCAGTTGCCAACCATTGAGTTCTTATTCTTTTAGAGATTGCTTTTCATTTCGTTGCAACCGCTAATGTGAATATGAATTGTTAGACTTCTACTGAATACTTTATAAATGCAGGTATAGAATCTATTTATCAGTGGAAGGGAGAGGTAAGGTTCCGATTTTCAAACATTCATGTATAGTTATCAAGTAGGTGATTTTTGTTTGTCTTTACGAACAAAAAGAACTTAACTGTAGGCTTTCTGTTTCTGGTTGACACAGATTCAGACGGACCCTGAGGAACTTCTGATCATTAAGACTAGGCAATCACTTCTGGGAGCACTGACAGATCATGTTAAGGCAAATCACCCATACGAGTAAGCTTAACATTCATTTTTTTTTTTCCATCCTTCATGTTTGTTGGGTTTTGGGCTCGTGTGTGTTTGTTTTTTTTAAAATTATTTTCAATATTGGGGGAACAATGAAGCGGACGGGCAAATAGAGTTGTGAATTGTGAACTGCTTTGCTTATCAGCCAGATACTTGTTTTATGGATAATATTCTTTATTTTTTTTACCTACATTCATTTGCCTTTCTTTTTCCTATTTACTCGTATATTTCAGGGATTTTATTTTATTTTATTTTAAATTTATACCAATCTTAGCTAAAACTTGAAACCAGAGGAAAATAGTTTTTAGGACTTTATTTTTTTATCATTGAAATTAGACTAAAGCTATAGTATCGTTAACGAGTGAAAAACCAAACGAAGAGATGGGCATGAGTAGCGGAAAACCAAACAAAAAGTAAAAAAAAACTAACAAGATCTCTCATCTCAGTTATCGGTTTTTCAATGGAGAGTTGGGAAGATGTTTTAAAAAGCCAAATTTTATCCCCTCCAAGGATTTACCTTCATTTTTGACACAGGGTGCCTGAAGTTATTGCTTTGCCAATCAATGGTGGCAGCCTAGAGTACCTAGAGTGGATCAAGAGCAGCACGAAGGACTGACTTTCTATGTGTTAACAAGTTTATTCGAGTATATCAAGTATTCTGTTTAATTTGTTATATGTACCCCTTCCCCACCTTTACGTACAAATGTCTCAATAAACTTGATGTTTTGTAAATAAGAGTTGAAATTTGGTTTCCAAATTGATCTTTTGTG

mRNA sequence

GACGGGGCGTCGAAAAGGCGCGACACGAAAATAGCGCTATAAAAACAGAAAATGGCTTTCACTCTTAGCAGCAGAGCCGCGACACCATTGATATCGTGCTTTGCACTACGTCGTCGTTTACCTCTGGTTGGTGCGTTTTGCGTACTAAGCTTCGGAATCTCCAATCTCTTCGTCTCCAAAACGGGTTCTGCTCTGTCTGTGCCTTTCGTCCCTCTCTTGAGATCGAAGCTTGCTGGTCAAGGTCCAGCTAGGAACGTACATTTGATAAAAATGGAAGGGAGTAGTGCTGCGGTGCCTAGCATTGTTGTTTATGTCACTGTTCCTAACAGGGAAGCAGGTAAGAAACTAGCTGAAAGCATTGTCAAAGAAAAACTTGCTGCTTGTGTTAACATAGTACCCGGTATAGAATCTATTTATCAGTGGAAGGGAGAGATTCAGACGGACCCTGAGGAACTTCTGATCATTAAGACTAGGCAATCACTTCTGGGAGCACTGACAGATCATGTTAAGGCAAATCACCCATACGAGGTGCCTGAAGTTATTGCTTTGCCAATCAATGGTGGCAGCCTAGAGTACCTAGAGTGGATCAAGAGCAGCACGAAGGACTGACTTTCTATGTGTTAACAAGTTTATTCGAGTATATCAAGTATTCTGTTTAATTTGTTATATGTACCCCTTCCCCACCTTTACGTACAAATGTCTCAATAAACTTGATGTTTTGTAAATAAGAGTTGAAATTTGGTTTCCAAATTGATCTTTTGTG

Coding sequence (CDS)

ATGGCTTTCACTCTTAGCAGCAGAGCCGCGACACCATTGATATCGTGCTTTGCACTACGTCGTCGTTTACCTCTGGTTGGTGCGTTTTGCGTACTAAGCTTCGGAATCTCCAATCTCTTCGTCTCCAAAACGGGTTCTGCTCTGTCTGTGCCTTTCGTCCCTCTCTTGAGATCGAAGCTTGCTGGTCAAGGTCCAGCTAGGAACGTACATTTGATAAAAATGGAAGGGAGTAGTGCTGCGGTGCCTAGCATTGTTGTTTATGTCACTGTTCCTAACAGGGAAGCAGGTAAGAAACTAGCTGAAAGCATTGTCAAAGAAAAACTTGCTGCTTGTGTTAACATAGTACCCGGTATAGAATCTATTTATCAGTGGAAGGGAGAGATTCAGACGGACCCTGAGGAACTTCTGATCATTAAGACTAGGCAATCACTTCTGGGAGCACTGACAGATCATGTTAAGGCAAATCACCCATACGAGGTGCCTGAAGTTATTGCTTTGCCAATCAATGGTGGCAGCCTAGAGTACCTAGAGTGGATCAAGAGCAGCACGAAGGACTGA

Protein sequence

MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKLAGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIESIYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIKSSTKD*
Homology
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BLAST of MELO3C011069 vs. Swiss-Prot
Match: CUTA_ARATH (Protein CutA, chloroplastic OS=Arabidopsis thaliana GN=CUTA PE=1 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 3.5e-43
Identity = 99/159 (62.26%), Postives = 116/159 (72.96%), Query Frame = 1 

Query: 5   LSSRAATPLISCFALRRRLPLVGAFCVLS-FGISNLFVS---KTGSALSVPFVPLLRSKL 64
           ++S   T L +    RR  P+VGAFCVLS   IS+L  S   K+G A S   VPLLRSK 
Sbjct: 1   MASSLTTRLSAVIGSRRSFPIVGAFCVLSTLSISSLSSSSPFKSGCAQSFSVVPLLRSKF 60

Query: 65  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 124
           + +  + +   I+ME SS  VPSIVVYVTVPNREAGKKLA SIV+EKLAACVNIVPGIES
Sbjct: 61  SSKAFSSS---IRMEESSKTVPSIVVYVTVPNREAGKKLANSIVQEKLAACVNIVPGIES 120

Query: 125 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYD 160
           +Y+W+G++Q+D EELLIIKTRQSLL  LT+HV ANH YD
Sbjct: 121 VYEWEGKVQSDSEELLIIKTRQSLLEPLTEHVNANHEYD 156

[Close]
BLAST of MELO3C011069 vs. Swiss-Prot
Match: CUTA1_ORYSJ (Protein CutA 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CUTA1 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.7e-34
Identity = 83/151 (54.97%), Postives = 97/151 (64.24%), Query Frame = 1 

Query: 9   AATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKLAGQGPARN 68
           AA   +S   LRRR P+ GA   LS G      S + SA +                   
Sbjct: 23  AAAAGLSPLLLRRRAPIAGALLFLSLGAFAGVRSLSSSASA------------------- 82

Query: 69  VHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIESIYQWKGEI 128
               +ME +S  VPSIVVYVTVPN+EAGK+LA SI+ EKLAACVNIVPGIES+Y W+G++
Sbjct: 83  ----RMESTSTTVPSIVVYVTVPNKEAGKRLAGSIISEKLAACVNIVPGIESVYWWEGKV 142

Query: 129 QTDPEELLIIKTRQSLLGALTDHVKANHPYD 160
           QTD EELLIIKTR+SLL ALT+HVKANH YD
Sbjct: 143 QTDAEELLIIKTRESLLDALTEHVKANHEYD 150

[Close]
BLAST of MELO3C011069 vs. Swiss-Prot
Match: CUTA_HUMAN (Protein CutA OS=Homo sapiens GN=CUTA PE=1 SV=2)

HSP 1 Score: 91.3 bits (225), Expect = 1.5e-17
Identity = 42/87 (48.28%), Postives = 62/87 (71.26%), Query Frame = 1 

Query: 75  EGSSAAVPSIV--VYVTVPNREAGKKLAESIVKEKLAACVNIVPGIESIYQWKGEIQTDP 134
           +  S  VP  V   +VT PN +  K++A ++V+++LAACVN++P I SIY+WKG+I+ D 
Sbjct: 58  DSGSGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDS 117

Query: 135 EELLIIKTRQSLLGALTDHVKANHPYD 160
           E L++IKT+ SL+ ALTD V++ HPY+
Sbjct: 118 EVLMMIKTQSSLVPALTDFVRSVHPYE 144

[Close]
BLAST of MELO3C011069 vs. Swiss-Prot
Match: CUTA_RAT (Protein CutA OS=Rattus norvegicus GN=Cuta PE=1 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 5.6e-17
Identity = 52/135 (38.52%), Postives = 78/135 (57.78%), Query Frame = 1 

Query: 27  GAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKLAGQGPARNVHLIKMEGSSAAVPSIV- 86
           GA  +LSF      +      L +P    L S  +G  P++          S  VP  V 
Sbjct: 14  GATLLLSFLCMPALLPVASRLLLLPRA--LLSMASGSPPSQP----SPASGSGYVPGSVS 73

Query: 87  -VYVTVPNREAGKKLAESIVKEKLAACVNIVPGIESIYQWKGEIQTDPEELLIIKTRQSL 146
             +VT PN +  K++A ++V+++LAACVN++P I SIY+WKG+I+ D E L++IKT+ SL
Sbjct: 74  AAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSSL 133

Query: 147 LGALTDHVKANHPYD 160
           + ALT+ V++ HPY+
Sbjct: 134 VPALTEFVRSVHPYE 142

[Close]
BLAST of MELO3C011069 vs. Swiss-Prot
Match: CUTA_XENLA (Protein CutA homolog OS=Xenopus laevis GN=cuta PE=2 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 7.3e-17
Identity = 39/73 (53.42%), Postives = 53/73 (72.60%), Query Frame = 1 

Query: 87  YVTVPNREAGKKLAESIVKEKLAACVNIVPGIESIYQWKGEIQTDPEELLIIKTRQSLLG 146
           YVT PN    K +A  +V+ KLAACVN++P I SIY+WKG+++ D E LL+IKTR S + 
Sbjct: 53  YVTCPNDTVAKDIARGLVERKLAACVNVIPQITSIYEWKGKLEEDTEVLLMIKTRSSKVS 112

Query: 147 ALTDHVKANHPYD 160
           ALT++V++ HPY+
Sbjct: 113 ALTEYVRSVHPYE 125

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BLAST of MELO3C011069 vs. TrEMBL
Match: A0A0A0LRU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G370360 PE=4 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 8.0e-79
Identity = 153/159 (96.23%), Postives = 158/159 (99.37%), Query Frame = 1 

Query: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60
           MAFTLSSRAATPLI+ FALRRRLPLVGAFCVLSFGISNLFVSKTGSALS+PFVPLLRSKL
Sbjct: 1   MAFTLSSRAATPLITSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYD 160
           +YQWKGEIQ+DPEELLIIKTRQSLLGALTDHVKANHPY+
Sbjct: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYE 159

[Close]
BLAST of MELO3C011069 vs. TrEMBL
Match: A0A061FEB3_THECC (Nitrogen regulatory PII-like isoform 1 OS=Theobroma cacao GN=TCM_034480 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 8.0e-55
Identity = 118/166 (71.08%), Postives = 135/166 (81.33%), Query Frame = 1 

Query: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVS-------KTGSALSVPFV 60
           MA TL  RA++ L+S   +RRRLPLVGAFCVLS G SNL  +       KTG A S+PFV
Sbjct: 1   MASTLRCRASS-LVSSTTIRRRLPLVGAFCVLSLGFSNLCPTLSSSSNFKTGCAQSLPFV 60

Query: 61  PLLRSKLAGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVN 120
           PLLRSK + Q P + VH +KMEGSS  VPSIVVYVTVPNREAG+KLAESIVKEKLAACVN
Sbjct: 61  PLLRSKFSTQLPDKPVHAVKMEGSSNTVPSIVVYVTVPNREAGRKLAESIVKEKLAACVN 120

Query: 121 IVPGIESIYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYD 160
           IVPG+ES+Y+W+G+I +DPEELLIIKTRQSLL ALT+HVKANH YD
Sbjct: 121 IVPGLESVYEWEGKINSDPEELLIIKTRQSLLEALTEHVKANHEYD 165

[Close]
BLAST of MELO3C011069 vs. TrEMBL
Match: F6H112_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g07230 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.1e-51
Identity = 112/164 (68.29%), Postives = 131/164 (79.88%), Query Frame = 1 

Query: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVS-----KTGSALSVPFVPL 60
           MA TL  +A++ ++S  A+RRRLPLVGAFC+LS G+SNL  +     KTG A S+PF P 
Sbjct: 1   MASTLCCKASS-IVSSSAVRRRLPLVGAFCMLSLGLSNLCPALSSSLKTGCAQSLPFGPF 60

Query: 61  LRSKLAGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV 120
           LRSK   Q PA++V  I+ME +   VPSIVVYVTVPN+EAGKKLAESIVKEKLAACVN V
Sbjct: 61  LRSKFGNQTPAKSVRSIRMEANQTTVPSIVVYVTVPNKEAGKKLAESIVKEKLAACVNRV 120

Query: 121 PGIESIYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYD 160
           PGIES+Y W+GEIQTD EELLIIKTR+SLL ALT+HVKANH YD
Sbjct: 121 PGIESVYHWQGEIQTDSEELLIIKTRESLLEALTEHVKANHEYD 163

[Close]
BLAST of MELO3C011069 vs. TrEMBL
Match: B9RJU6_RICCO (Protein CutA, chloroplast, putative OS=Ricinus communis GN=RCOM_1039080 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 3.2e-51
Identity = 113/164 (68.90%), Postives = 128/164 (78.05%), Query Frame = 1 

Query: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVS-----KTGSALSVPFVPL 60
           MA  L S   T +IS   +RRRLPLVGAFCVLS G+SNL  +     KTG A S+PFVPL
Sbjct: 1   MASALCSTRITSVISSSTVRRRLPLVGAFCVLSLGLSNLCPALSSSLKTGCAQSLPFVPL 60

Query: 61  LRSKLAGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV 120
           LRSK + +  A     I+ME S+  VPS+VVYVTVPNR+AGKKLA+SIVKEKLAACVNIV
Sbjct: 61  LRSKFSTRSQANT---IRMESSAGTVPSVVVYVTVPNRDAGKKLAQSIVKEKLAACVNIV 120

Query: 121 PGIESIYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYD 160
           PGIES+YQW+GEIQTD EELLIIKTR SLL ALTDHVKANH Y+
Sbjct: 121 PGIESVYQWQGEIQTDSEELLIIKTRDSLLDALTDHVKANHEYE 161

[Close]
BLAST of MELO3C011069 vs. TrEMBL
Match: B9GV26_POPTR (Copper-binding family protein OS=Populus trichocarpa GN=POPTR_0002s10390g PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-50
Identity = 115/167 (68.86%), Postives = 133/167 (79.64%), Query Frame = 1 

Query: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVS-------KTGSALSVPFV 60
           MA ++ SRAA+ L S   +RRRLPLVGAFC++S G+SNL  +       KTGSA S+PF+
Sbjct: 1   MASSVFSRAASILPST-TIRRRLPLVGAFCMISLGLSNLCPTNLSSSSLKTGSAQSLPFI 60

Query: 61  PLLRSKL-AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACV 120
           PLLRSK  + Q  A     I+MEG+S  VPSIVVYVTVPNREAGKKLA SIVKEKLAACV
Sbjct: 61  PLLRSKFGSSQAAATQATNIRMEGNSDTVPSIVVYVTVPNREAGKKLANSIVKEKLAACV 120

Query: 121 NIVPGIESIYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYD 160
           NIVPGIES+YQW+GEIQ+D EELLIIKTRQSLL ALT+HVKANH Y+
Sbjct: 121 NIVPGIESVYQWQGEIQSDAEELLIIKTRQSLLEALTEHVKANHEYE 166

[Close]
BLAST of MELO3C011069 vs. TAIR10
Match: AT2G33740.2 (AT2G33740.2 Nitrogen regulatory PII-like, alpha/beta)

HSP 1 Score: 176.4 bits (446), Expect = 2.0e-44
Identity = 99/159 (62.26%), Postives = 116/159 (72.96%), Query Frame = 1 

Query: 5   LSSRAATPLISCFALRRRLPLVGAFCVLS-FGISNLFVS---KTGSALSVPFVPLLRSKL 64
           ++S   T L +    RR  P+VGAFCVLS   IS+L  S   K+G A S   VPLLRSK 
Sbjct: 1   MASSLTTRLSAVIGSRRSFPIVGAFCVLSTLSISSLSSSSPFKSGCAQSFSVVPLLRSKF 60

Query: 65  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 124
           + +  + +   I+ME SS  VPSIVVYVTVPNREAGKKLA SIV+EKLAACVNIVPGIES
Sbjct: 61  SSKAFSSS---IRMEESSKTVPSIVVYVTVPNREAGKKLANSIVQEKLAACVNIVPGIES 120

Query: 125 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYD 160
           +Y+W+G++Q+D EELLIIKTRQSLL  LT+HV ANH YD
Sbjct: 121 VYEWEGKVQSDSEELLIIKTRQSLLEPLTEHVNANHEYD 156

[Close]
BLAST of MELO3C011069 vs. NCBI nr
Match: gi|659088272|ref|XP_008444893.1| (PREDICTED: protein CutA, chloroplastic [Cucumis melo])

HSP 1 Score: 309.7 bits (792), Expect = 4.2e-81
Identity = 158/159 (99.37%), Postives = 159/159 (100.00%), Query Frame = 1 

Query: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60
           MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL
Sbjct: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYD 160
           IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPY+
Sbjct: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYE 159

[Close]
BLAST of MELO3C011069 vs. NCBI nr
Match: gi|449469805|ref|XP_004152609.1| (PREDICTED: protein CutA, chloroplastic [Cucumis sativus])

HSP 1 Score: 301.6 bits (771), Expect = 1.1e-78
Identity = 153/159 (96.23%), Postives = 158/159 (99.37%), Query Frame = 1 

Query: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60
           MAFTLSSRAATPLI+ FALRRRLPLVGAFCVLSFGISNLFVSKTGSALS+PFVPLLRSKL
Sbjct: 1   MAFTLSSRAATPLITSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60

Query: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120
           AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYD 160
           +YQWKGEIQ+DPEELLIIKTRQSLLGALTDHVKANHPY+
Sbjct: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYE 159

[Close]
BLAST of MELO3C011069 vs. NCBI nr
Match: gi|590595884|ref|XP_007018181.1| (Nitrogen regulatory PII-like isoform 1 [Theobroma cacao])

HSP 1 Score: 221.9 bits (564), Expect = 1.2e-54
Identity = 118/166 (71.08%), Postives = 135/166 (81.33%), Query Frame = 1 

Query: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVS-------KTGSALSVPFV 60
           MA TL  RA++ L+S   +RRRLPLVGAFCVLS G SNL  +       KTG A S+PFV
Sbjct: 1   MASTLRCRASS-LVSSTTIRRRLPLVGAFCVLSLGFSNLCPTLSSSSNFKTGCAQSLPFV 60

Query: 61  PLLRSKLAGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVN 120
           PLLRSK + Q P + VH +KMEGSS  VPSIVVYVTVPNREAG+KLAESIVKEKLAACVN
Sbjct: 61  PLLRSKFSTQLPDKPVHAVKMEGSSNTVPSIVVYVTVPNREAGRKLAESIVKEKLAACVN 120

Query: 121 IVPGIESIYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYD 160
           IVPG+ES+Y+W+G+I +DPEELLIIKTRQSLL ALT+HVKANH YD
Sbjct: 121 IVPGLESVYEWEGKINSDPEELLIIKTRQSLLEALTEHVKANHEYD 165

[Close]
BLAST of MELO3C011069 vs. NCBI nr
Match: gi|1000977646|ref|XP_002514015.2| (PREDICTED: protein CutA, chloroplastic isoform X1 [Ricinus communis])

HSP 1 Score: 211.5 bits (537), Expect = 1.6e-51
Identity = 114/164 (69.51%), Postives = 128/164 (78.05%), Query Frame = 1 

Query: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVS-----KTGSALSVPFVPL 60
           MA  L S   T +IS   +RRRLPLVGAFCVLS G+SNL  +     KTG A S+PFVPL
Sbjct: 1   MASALCSTRITSVISSSTVRRRLPLVGAFCVLSLGLSNLCPALSSSLKTGCAQSLPFVPL 60

Query: 61  LRSKLAGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV 120
           LRSK + +  A     I+ME S+  VPS+VVYVTVPNR+AGKKLA+SIVKEKLAACVNIV
Sbjct: 61  LRSKFSTRSQANT---IRMESSAGTVPSVVVYVTVPNRDAGKKLAQSIVKEKLAACVNIV 120

Query: 121 PGIESIYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYD 160
           PGIES+YQW+GEIQTD EELLIIKTR SLL ALTDHVKANH YD
Sbjct: 121 PGIESVYQWQGEIQTDSEELLIIKTRDSLLDALTDHVKANHEYD 161

[Close]
BLAST of MELO3C011069 vs. NCBI nr
Match: gi|225459136|ref|XP_002285702.1| (PREDICTED: protein CutA, chloroplastic [Vitis vinifera])

HSP 1 Score: 211.5 bits (537), Expect = 1.6e-51
Identity = 112/164 (68.29%), Postives = 131/164 (79.88%), Query Frame = 1 

Query: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVS-----KTGSALSVPFVPL 60
           MA TL  +A++ ++S  A+RRRLPLVGAFC+LS G+SNL  +     KTG A S+PF P 
Sbjct: 1   MASTLCCKASS-IVSSSAVRRRLPLVGAFCMLSLGLSNLCPALSSSLKTGCAQSLPFGPF 60

Query: 61  LRSKLAGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV 120
           LRSK   Q PA++V  I+ME +   VPSIVVYVTVPN+EAGKKLAESIVKEKLAACVN V
Sbjct: 61  LRSKFGNQTPAKSVRSIRMEANQTTVPSIVVYVTVPNKEAGKKLAESIVKEKLAACVNRV 120

Query: 121 PGIESIYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYD 160
           PGIES+Y W+GEIQTD EELLIIKTR+SLL ALT+HVKANH YD
Sbjct: 121 PGIESVYHWQGEIQTDSEELLIIKTRESLLEALTEHVKANHEYD 163

The following BLAST results are available for this feature:
BLAST of MELO3C011069 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CUTA_ARATH3.5e-4362.26Protein CutA, chloroplastic OS=Arabidopsis thaliana GN=CUTA PE=1 SV=1[more]
CUTA1_ORYSJ1.7e-3454.97Protein CutA 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CUTA1 PE=1 SV=1[more]
CUTA_HUMAN1.5e-1748.28Protein CutA OS=Homo sapiens GN=CUTA PE=1 SV=2[more]
CUTA_RAT5.6e-1738.52Protein CutA OS=Rattus norvegicus GN=Cuta PE=1 SV=2[more]
CUTA_XENLA7.3e-1753.42Protein CutA homolog OS=Xenopus laevis GN=cuta PE=2 SV=2[more]
BLAST of MELO3C011069 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRU0_CUCSA8.0e-7996.23Uncharacterized protein OS=Cucumis sativus GN=Csa_2G370360 PE=4 SV=1[more]
A0A061FEB3_THECC8.0e-5571.08Nitrogen regulatory PII-like isoform 1 OS=Theobroma cacao GN=TCM_034480 PE=4 SV=... [more]
F6H112_VITVI1.1e-5168.29Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g07230 PE=4 SV=... [more]
B9RJU6_RICCO3.2e-5168.90Protein CutA, chloroplast, putative OS=Ricinus communis GN=RCOM_1039080 PE=4 SV=... [more]
B9GV26_POPTR1.2e-5068.86Copper-binding family protein OS=Populus trichocarpa GN=POPTR_0002s10390g PE=4 S... [more]
BLAST of MELO3C011069 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G33740.22.0e-4462.26 Nitrogen regulatory PII-like, alpha/beta[more]
BLAST of MELO3C011069 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659088272|ref|XP_008444893.1|4.2e-8199.37PREDICTED: protein CutA, chloroplastic [Cucumis melo][more]
gi|449469805|ref|XP_004152609.1|1.1e-7896.23PREDICTED: protein CutA, chloroplastic [Cucumis sativus][more]
gi|590595884|ref|XP_007018181.1|1.2e-5471.08Nitrogen regulatory PII-like isoform 1 [Theobroma cacao][more]
gi|1000977646|ref|XP_002514015.2|1.6e-5169.51PREDICTED: protein CutA, chloroplastic isoform X1 [Ricinus communis][more]
gi|225459136|ref|XP_002285702.1|1.6e-5168.29PREDICTED: protein CutA, chloroplastic [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004323Ion_tolerance_CutA
IPR011322N-reg_PII-like_a/b
IPR004323Ion_tolerance_CutA
IPR011322N-reg_PII-like_a/b
Vocabulary: Biological Process
TermDefinition
GO:0010038response to metal ion
GO:0010038response to metal ion
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0048573 photoperiodism, flowering
biological_process GO:0010038 response to metal ion
cellular_component GO:0009507 chloroplast
cellular_component GO:0005575 cellular_component
molecular_function GO:0005507 copper ion binding
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
MU50290melon EST collection version 4.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C011069T1MELO3C011069T1mRNA
MELO3C011069T2MELO3C011069T2mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
MU50290MU50290transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004323Divalent ion tolerance protein, CutAPANTHERPTHR23419DIVALENT CATION TOLERANCE CUTA-RELATEDcoord: 20..185
score: 1.1
IPR004323Divalent ion tolerance protein, CutAPFAMPF03091CutA1coord: 84..181
score: 8.0
IPR011322Nitrogen regulatory PII-like, alpha/betaunknownSSF54913GlnB-likecoord: 83..184
score: 1.45
NoneNo IPR availableGENE3DG3DSA:3.30.70.830coord: 76..184
score: 1.7
NoneNo IPR availablePANTHERPTHR23419:SF0PROTEIN F35G12.7coord: 20..185
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
MELO3C011069Csa2G370360Cucumber (Chinese Long) v2cumeB117
MELO3C011069Cla022136Watermelon (97103) v1mewmB307
MELO3C011069ClCG08G011520Watermelon (Charleston Gray)mewcgB299
MELO3C011069Cla97C08G154540Watermelon (97103) v2mewmbB306
MELO3C011069CSPI02G21460Wild cucumber (PI 183967)cpimeB118
MELO3C011069Cucsa.160460Cucumber (Gy14) v1cgymeB276
MELO3C011069CmaCh05G005310Cucurbita maxima (Rimu)cmameB728
MELO3C011069CmoCh05G005580Cucurbita moschata (Rifu)cmomeB719
MELO3C011069Lsi08G010080Bottle gourd (USVL1VR-Ls)lsimeB474
MELO3C011069Cp4.1LG11g04600Cucurbita pepo (Zucchini)cpemeB092
MELO3C011069CsGy2G021200Cucumber (Gy14) v2cgybmeB102
MELO3C011069Carg08222Silver-seed gourdcarmeB0058
MELO3C011069CsaV3_2G030110Cucumber (Chinese Long) v3cucmeB124
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C011069Wax gourdmewgoB321
MELO3C011069Wax gourdmewgoB332
MELO3C011069Melon (DHL92) v3.5.1memeB131
MELO3C011069Cucumber (Gy14) v1cgymeB127
MELO3C011069Cucurbita maxima (Rimu)cmameB158
MELO3C011069Cucurbita maxima (Rimu)cmameB597
MELO3C011069Cucurbita maxima (Rimu)cmameB787
MELO3C011069Cucurbita moschata (Rifu)cmomeB148
MELO3C011069Cucurbita moschata (Rifu)cmomeB587
MELO3C011069Cucurbita moschata (Rifu)cmomeB774
MELO3C011069Wild cucumber (PI 183967)cpimeB471
MELO3C011069Cucumber (Chinese Long) v2cumeB471
MELO3C011069Watermelon (Charleston Gray)mewcgB279
MELO3C011069Watermelon (97103) v1mewmB323
MELO3C011069Cucurbita pepo (Zucchini)cpemeB051
MELO3C011069Cucurbita pepo (Zucchini)cpemeB440
MELO3C011069Cucurbita pepo (Zucchini)cpemeB756
MELO3C011069Bottle gourd (USVL1VR-Ls)lsimeB136
MELO3C011069Cucumber (Gy14) v2cgybmeB413
MELO3C011069Silver-seed gourdcarmeB0407
MELO3C011069Silver-seed gourdcarmeB0630
MELO3C011069Silver-seed gourdcarmeB0816
MELO3C011069Cucumber (Chinese Long) v3cucmeB482
MELO3C011069Watermelon (97103) v2mewmbB275