CmoCh05G005580 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh05G005580
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Divalent-cation tolerance protein CutA
Location	Cmo_Chr05 : 2699874 .. 2702894 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTGAAGGCATCAAGTAAGCTCAAGCCGGAGCGTTGAAAAGGCGCGACAGGATTAGCGCTATAAAAGCGAAATGGCCTTTACTCTCTGCAGCAGAGTCGCGACTCCATTGCTATCATCCTCAGTCCTACGACGTCGTTTACCTCTGGTTGGTGCGTTTTGCGTACTGAGCTTAGGATTCTCCAATCTCTTCGTCTCCAGAACGGGTTCCGCTCTGTCGCTGCCTTTCGCACCTCTCTTGAGGTACTTCTTTTCGCCGATTCATTTCTTCCACGATTGTTTCTTGCTGTGAATTTGCTTTTGTTGCTGGTTATTTTGTTTAGATTCTTTATTTGATTTGTATTCTTGTTGATTTGCTAACGGAAAACGTATATCAGATCGACGTTTGGTAGTCAAGGACCTGCTAGGAACGTGCATTTGATAAAAATGGAAGGGAATAGTGCCGCGGTGCCTAGCATTGTTGTTTATGTCACTGTTCCTAACAGGGAAGCAGGTTCTATATTTTCTCTCTGCTCTAGAAGTCTAGCGTTATTTTGCGGTTTGGAATTCATTGATCGTTCACTGGTATCTTGAAAAATTGGAACAATATATATAATCGGATTAGCATAGATATTTTTCGTTGCTATGCCTTTTGTCTTGAGGTTTCCAATATCTCGTGTTCGGCATTTGACTTGGTTGCTTGTCAGTCAATCTAGTGTCAGGCTCTTCTAGCAGCGGTATATACACTTTGGTTGATGGTAACATAGTTGTATGTTGATCGAGTAGTATGGGAATTGACGATATGGTTTCAGTATTGAACTTCTTATGCTAGTAATGTCTTCACTGTACTTGGCTACGATGGAGTCGAGTGTTGATACTTGATAGGATCTTGTTGATTATGATTTAGACATATATATACTTGGCGCATTGTACTAATAATGACCAGACTCGGTAGGCCGATGATGAAGTATATTGTAGCTTAGGAAATGCTGTAATGTATATATATTATTGTTGAATATATAGCATGTGTTCTTATCCAAGAACAAAAAAGAATATGTAGCATGGTTTGTTTTCTTCTGGTATTAAAGAAGGTTTAGCAGTAACCGACTCACTTGGATGATTAATGTTCTAAGATAATAAGGGCCTTTTTGGAATTTAATATGGAGTATGTTTTATGCTTTCGAATTCTCTTGGTTAAATGGGTTCAGTAAATATCTGTTTGGCATATATTTCTCTAAACGGTTTGTGAATTTAGTGATCCAAATTGTAGAAATTCTAAAATCAAATATTTATGCCGGTGTATCCAATTTTGAGTTTGAAATTTCAAAATCCAGAATTATATTAACTACTCCATTGTTGTTAAAATTAAATTAATATAATAAATTAATCCAATGTTTCATATTCCAATCCAATAAGTTCCTCTATTTTTTCCGTTGTGACCACTTTCTTCTATTTATTTTTCAATAAGAAAATGATATGCCTACCCCTGTAATTTAAGTGTCTAGAAAGCGTTGGATTGGTGTTTAATGCCCAAGCTAAGGTGTAATGTGTTTCATAAGACTGATTGGTTGGGCAATGGGTAGAGCAAGGGAGGTTATAGAATTAATTGACTTTTCAGTACTATAGGATTTACATTTTAGTAGATGTTATGTTTCTTATCTCACTCGTTCACATTCTTTCTGCAGGTAAGAAGCTAGCCGAAAGCATTGTCAAAGAGAAACTTGCTGCTTGTGTTAACATAGTTTCCGGTATGTGCATCTTCTCCTGCTGCTTGTCAGCTTAAAGTGAAAGAATGCATTCTTCATAGTTTGGAAAAGATATTAGTTCAACAATATTTATAATCCATGCTAGCAGAACATTTGTTATCCTCCTCTAAGTTCTCTATTCATATAAATAAAGTTGCTTCTGACCATTTAAAATTGAAGCTTACTGGATCTTCTCTGGAATATTTTAATGCTGTTTTTGAGTTAAGGAAACTTTATAAATACTCTACTTGATCATGTTGGGAACAGAATTGCTTTCCTTTTCATCCTTTGACACTTCAGACCGTGTGATTTCACAAACAGAAGTGATGCATCAAGACGTTTTCACAGCCCCGTTTTATTTTTTTTTTTCCCCCAATTTTCACAATGCATTTCTTTTCTTGTAGAGGTTTATTTTTATTTATTGCAACTGCCTAGTAATATGACTTTTCAGATTTCTAATGAATACTTTATATATGCAGGTATAGAATCCGTCTACCAGTGGAAGGGAGAGGTATGGTTCTCATTTTCATAAATTGCTATATAGTTATCAAGTATGTGATCGCCTGTTTGTCTTTTCCAGAAAATGAATTTAACTGTAGGCTTTTTGTTTATGGTCGACGCAGATCCAGACAGACGCTGAGGAACTTCTGATTATTAAGACCAGGCAATCACTTCTGGGAGCACTGACAGATCATGTTAAGGCAAATCACCCATACGAGTAAGCCTAACATTCTTCCTTTGTTTTTGTCTTGTGTTTTGTTTGTTGCTGTCTGTGAGTGTGTTTCTCATTTTCAATGTCGGGTACAATGTGAACTGTTCAGCTTATCGGCTAGACATTTAGGGTTTTTAAGGATAATTTTTTTTTATTTCGTTAACCATATTCATTTGCTGATATCTTTTTTTTGTTAGTCATTATTTTCATGAATGACTGTAAAATCTTAGCTAAAATTTGAAAACTAAGTAGCAGAATACCAAAAGAAAATATAATAATAATAAACCCATTATAAAAAATGAGTTGTATTTTGACCTCTGGGTTCTTGTTTTTCGAATTTATCTAAGAATTAAAAGTTTTTGCTTGGGAGAGATGAAAGCTGTGGTAAAGATAAGAATTGAAATCTTTACTTGGGAAATATGAAAACTGTGGTAAAAATGATGAGAAAACAAGCTAGTTATATGTATAAAAGCCCTATTTTGTTGCCTCCATCTTTTTTACACAGGGTGCCTGAAGTTATTGCTTTGCCTATCAATGGTGGCAGCGGGGAGTACCTAGAGTGGATCAAGAGCAGCACGAAGGACTGA

mRNA sequence

AGTGAAGGCATCAAGTAAGCTCAAGCCGGAGCGTTGAAAAGGCGCGACAGGATTAGCGCTATAAAAGCGAAATGGCCTTTACTCTCTGCAGCAGAGTCGCGACTCCATTGCTATCATCCTCAGTCCTACGACGTCGTTTACCTCTGGTTGGTGCGTTTTGCGTACTGAGCTTAGGATTCTCCAATCTCTTCGTCTCCAGAACGGGTTCCGCTCTGTCGCTGCCTTTCGCACCTCTCTTGAGATCGACGTTTGGTAGTCAAGGACCTGCTAGGAACGTGCATTTGATAAAAATGGAAGGGAATAGTGCCGCGGTGCCTAGCATTGTTGTTTATGTCACTGTTCCTAACAGGGAAGCAGGTAAGAAGCTAGCCGAAAGCATTGTCAAAGAGAAACTTGCTGCTTGTGTTAACATAGTTTCCGGTATAGAATCCGTCTACCAGTGGAAGGGAGAGATCCAGACAGACGCTGAGGAACTTCTGATTATTAAGACCAGGCAATCACTTCTGGGAGCACTGACAGATCATGTTAAGGCAAATCACCCATACGAGGTGCCTGAAGTTATTGCTTTGCCTATCAATGGTGGCAGCGGGGAGTACCTAGAGTGGATCAAGAGCAGCACGAAGGACTGA

Coding sequence (CDS)

ATGGCCTTTACTCTCTGCAGCAGAGTCGCGACTCCATTGCTATCATCCTCAGTCCTACGACGTCGTTTACCTCTGGTTGGTGCGTTTTGCGTACTGAGCTTAGGATTCTCCAATCTCTTCGTCTCCAGAACGGGTTCCGCTCTGTCGCTGCCTTTCGCACCTCTCTTGAGATCGACGTTTGGTAGTCAAGGACCTGCTAGGAACGTGCATTTGATAAAAATGGAAGGGAATAGTGCCGCGGTGCCTAGCATTGTTGTTTATGTCACTGTTCCTAACAGGGAAGCAGGTAAGAAGCTAGCCGAAAGCATTGTCAAAGAGAAACTTGCTGCTTGTGTTAACATAGTTTCCGGTATAGAATCCGTCTACCAGTGGAAGGGAGAGATCCAGACAGACGCTGAGGAACTTCTGATTATTAAGACCAGGCAATCACTTCTGGGAGCACTGACAGATCATGTTAAGGCAAATCACCCATACGAGGTGCCTGAAGTTATTGCTTTGCCTATCAATGGTGGCAGCGGGGAGTACCTAGAGTGGATCAAGAGCAGCACGAAGGACTGA

Homology

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BLAST of CmoCh05G005580 vs. Swiss-Prot
Match: CUTA_ARATH (Protein CutA, chloroplastic OS=Arabidopsis thaliana GN=CUTA PE=1 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 6.8e-53
Identity = 117/189 (61.90%), Postives = 145/189 (76.72%), Query Frame = 1


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLS-LGFSNLFVS---RTGSALSLPFAPLL 60
           MA +L +R++  + S    RR  P+VGAFCVLS L  S+L  S   ++G A S    PLL
Sbjct: 1   MASSLTTRLSAVIGS----RRSFPIVGAFCVLSTLSISSLSSSSPFKSGCAQSFSVVPLL 60

Query: 61  RSTFGSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVS 120
           RS F S+  + +   I+ME +S  VPSIVVYVTVPNREAGKKLA SIV+EKLAACVNIV 
Sbjct: 61  RSKFSSKAFSSS---IRMEESSKTVPSIVVYVTVPNREAGKKLANSIVQEKLAACVNIVP 120

Query: 121 GIESVYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYL 180
           GIESVY+W+G++Q+D+EELLIIKTRQSLL  LT+HV ANH Y+VPEVIALPI GGS +YL
Sbjct: 121 GIESVYEWEGKVQSDSEELLIIKTRQSLLEPLTEHVNANHEYDVPEVIALPITGGSDKYL 180

Query: 181 EWIKSSTKD 186
           EW+K+ST++
Sbjct: 181 EWLKNSTRN 182

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BLAST of CmoCh05G005580 vs. Swiss-Prot
Match: CUTA1_ORYSJ (Protein CutA 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CUTA1 PE=1 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 8.1e-46
Identity = 101/172 (58.72%), Postives = 121/172 (70.35%), Query Frame = 1


Query: 14  LSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTFGSQGPARNVHLIK 73
           LS  +LRRR P+ GA   LSLG      S + SA +                       +
Sbjct: 28  LSPLLLRRRAPIAGALLFLSLGAFAGVRSLSSSASA-----------------------R 87

Query: 74  MEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQTDAE 133
           ME  S  VPSIVVYVTVPN+EAGK+LA SI+ EKLAACVNIV GIESVY W+G++QTDAE
Sbjct: 88  MESTSTTVPSIVVYVTVPNKEAGKRLAGSIISEKLAACVNIVPGIESVYWWEGKVQTDAE 147

Query: 134 ELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIKSSTKD 186
           ELLIIKTR+SLL ALT+HVKANH Y+VPEVIALPI GG+ +YLEW+K+ST++
Sbjct: 148 ELLIIKTRESLLDALTEHVKANHEYDVPEVIALPIKGGNLKYLEWLKNSTRE 176

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BLAST of CmoCh05G005580 vs. Swiss-Prot
Match: CUTA_HUMAN (Protein CutA OS=Homo sapiens GN=CUTA PE=1 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 3.5e-25
Identity = 63/161 (39.13%), Postives = 97/161 (60.25%), Query Frame = 1


Query: 31  VLSLGFSNLFVSRTGSALSLPFA------PLLRSTFGSQGPARNVHLIKMEGNSAAVPSI 90
           VL  G ++L +S       LP A      P +  T  S  P          G+     S+
Sbjct: 9   VLLGGVASLLLSFVWMPALLPVASRLLLLPRVLLTMASGSPPTQPSPASDSGSGYVPGSV 68

Query: 91  -VVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQTDAEELLIIKTRQS 150
              +VT PN +  K++A ++V+++LAACVN++  I S+Y+WKG+I+ D+E L++IKT+ S
Sbjct: 69  SAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVLMMIKTQSS 128

Query: 151 LLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIKSSTK 185
           L+ ALTD V++ HPYEV EVIALP+  G+  YL+W++  T+
Sbjct: 129 LVPALTDFVRSVHPYEVAEVIALPVEQGNFPYLQWVRQVTE 169

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BLAST of CmoCh05G005580 vs. Swiss-Prot
Match: CUTA_BOVIN (Protein CutA OS=Bos taurus GN=CUTA PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 7.9e-25
Identity = 69/160 (43.12%), Postives = 100/160 (62.50%), Query Frame = 1


Query: 27  GAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTFGSQGPARNVHLIKMEGNSAAVPSIV- 86
           GA  +LSL +    +      L LP A LL    GS  PA+          SA VP  V 
Sbjct: 14  GAALLLSLFWMPTLLPAASRLLLLPRA-LLSMASGSP-PAQP----SSSSRSAYVPGSVS 73

Query: 87  -VYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQTDAEELLIIKTRQSL 146
             +VT PN +  K++A ++V+++LA CVN+V  I S+Y+WKG+I+ D+E L++IKT+ SL
Sbjct: 74  AAFVTCPNEKVAKEIARAVVEKRLA-CVNLVPQITSIYEWKGKIEEDSEVLMMIKTQSSL 133

Query: 147 LGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIKSSTK 185
           + ALTD V++ HPYEV EVIALP+  G+  YL+W++  T+
Sbjct: 134 VPALTDFVRSVHPYEVAEVIALPVEQGNSPYLQWVRQVTE 166

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BLAST of CmoCh05G005580 vs. Swiss-Prot
Match: CUTA_RAT (Protein CutA OS=Rattus norvegicus GN=Cuta PE=1 SV=2)

HSP 1 Score: 112.8 bits (281), Expect = 3.9e-24
Identity = 52/109 (47.71%), Postives = 79/109 (72.48%), Query Frame = 1


Query: 78  SAAVPSIV--VYVTVPNREAGKKLAESIVKEKLAACVNIVSGIESVYQWKGEIQTDAEEL 137
           S  VP  V   +VT PN +  K++A ++V+++LAACVN++  I S+Y+WKG+I+ D+E L
Sbjct: 59  SGYVPGSVSAAFVTCPNEKVAKEIARAVVEKRLAACVNLIPQITSIYEWKGKIEEDSEVL 118

Query: 138 LIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIKSSTK 185
           ++IKT+ SL+ ALT+ V++ HPYEV EVIALP+  G+  YL W+   T+
Sbjct: 119 MMIKTQSSLVPALTEFVRSVHPYEVAEVIALPVEQGNPPYLHWVHQVTE 167

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BLAST of CmoCh05G005580 vs. TrEMBL
Match: A0A0A0LRU0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G370360 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 3.6e-85
Identity = 166/185 (89.73%), Postives = 171/185 (92.43%), Query Frame = 1


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF 60
           MAFTL SR ATPL++S  LRRRLPLVGAFCVLS G SNLFVS+TGSALSLPF PLLRS  
Sbjct: 1   MAFTLSSRAATPLITSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60

Query: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIES 120
             QGPARNVHLIKMEG+SAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK 180
           VYQWKGEIQ+D EELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS EYLEWIK
Sbjct: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

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BLAST of CmoCh05G005580 vs. TrEMBL
Match: F6H112_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g07230 PE=4 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 3.7e-66
Identity = 136/190 (71.58%), Postives = 158/190 (83.16%), Query Frame = 1


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVS-----RTGSALSLPFAPL 60
           MA TLC + A+ ++SSS +RRRLPLVGAFC+LSLG SNL  +     +TG A SLPF P 
Sbjct: 1   MASTLCCK-ASSIVSSSAVRRRLPLVGAFCMLSLGLSNLCPALSSSLKTGCAQSLPFGPF 60

Query: 61  LRSTFGSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV 120
           LRS FG+Q PA++V  I+ME N   VPSIVVYVTVPN+EAGKKLAESIVKEKLAACVN V
Sbjct: 61  LRSKFGNQTPAKSVRSIRMEANQTTVPSIVVYVTVPNKEAGKKLAESIVKEKLAACVNRV 120

Query: 121 SGIESVYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEY 180
            GIESVY W+GEIQTD+EELLIIKTR+SLL ALT+HVKANH Y+VPEVIALPI GG+ +Y
Sbjct: 121 PGIESVYHWQGEIQTDSEELLIIKTRESLLEALTEHVKANHEYDVPEVIALPITGGNLQY 180

Query: 181 LEWIKSSTKD 186
           LEWIK+ST+D
Sbjct: 181 LEWIKNSTRD 189

[Close]

BLAST of CmoCh05G005580 vs. TrEMBL
Match: A0A061FEB3_THECC (Nitrogen regulatory PII-like isoform 1 OS=Theobroma cacao GN=TCM_034480 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 8.4e-66
Identity = 137/192 (71.35%), Postives = 159/192 (82.81%), Query Frame = 1


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVS-------RTGSALSLPFA 60
           MA TL  R A+ L+SS+ +RRRLPLVGAFCVLSLGFSNL  +       +TG A SLPF 
Sbjct: 1   MASTLRCR-ASSLVSSTTIRRRLPLVGAFCVLSLGFSNLCPTLSSSSNFKTGCAQSLPFV 60

Query: 61  PLLRSTFGSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVN 120
           PLLRS F +Q P + VH +KMEG+S  VPSIVVYVTVPNREAG+KLAESIVKEKLAACVN
Sbjct: 61  PLLRSKFSTQLPDKPVHAVKMEGSSNTVPSIVVYVTVPNREAGRKLAESIVKEKLAACVN 120

Query: 121 IVSGIESVYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSG 180
           IV G+ESVY+W+G+I +D EELLIIKTRQSLL ALT+HVKANH Y+VPEVIALPI GGS 
Sbjct: 121 IVPGLESVYEWEGKINSDPEELLIIKTRQSLLEALTEHVKANHEYDVPEVIALPITGGSP 180

Query: 181 EYLEWIKSSTKD 186
           +YLEW+K+ST+D
Sbjct: 181 QYLEWLKNSTRD 191

[Close]

BLAST of CmoCh05G005580 vs. TrEMBL
Match: A0A067L2J3_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15865 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 7.8e-64
Identity = 137/190 (72.11%), Postives = 152/190 (80.00%), Query Frame = 1


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVS-----RTGSALSLPFAPL 60
           MA  LCS     + SSS +RRRLPLVGAFC+LSLG SNL        +TG A SLPF PL
Sbjct: 1   MASVLCS--TRSVFSSSTIRRRLPLVGAFCMLSLGLSNLCTPLSSSLKTGCAQSLPFVPL 60

Query: 61  LRSTFGSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV 120
           LRS FG+Q  A  V   +MEG+   VPSIVVYVTVPNREAGKKLA+SIVKEKLAACVNIV
Sbjct: 61  LRSKFGTQSRASTV---RMEGSGNTVPSIVVYVTVPNREAGKKLAQSIVKEKLAACVNIV 120

Query: 121 SGIESVYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEY 180
            GIESVY+WKGEIQTD+EELLIIKTRQSLL ALT+HVKANH YEVPEVI+LPI GGS  Y
Sbjct: 121 PGIESVYEWKGEIQTDSEELLIIKTRQSLLEALTEHVKANHEYEVPEVISLPITGGSIPY 180

Query: 181 LEWIKSSTKD 186
           LEW+K+ST+D
Sbjct: 181 LEWLKNSTRD 185

[Close]

BLAST of CmoCh05G005580 vs. TrEMBL
Match: W9SDS0_9ROSA (Protein CutA OS=Morus notabilis GN=L484_000757 PE=4 SV=1)

HSP 1 Score: 250.8 bits (639), Expect = 1.3e-63
Identity = 132/191 (69.11%), Postives = 154/191 (80.63%), Query Frame = 1


Query: 1   MAFTLCSR---VATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVS---RTGSALSLPFAP 60
           MA  LC R   V++P+LSS+ +RRRLPLVGAFCV+SLG SNL  S   +TG A SLPF P
Sbjct: 1   MASALCCRARSVSSPILSSARIRRRLPLVGAFCVISLGLSNLCPSLSFKTGCAQSLPFVP 60

Query: 61  LLRSTFGSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNI 120
           L +S F SQ  A++   I+M   S  VPSIVVYVTVPN+E GKKLAES+V+EKLAACVN 
Sbjct: 61  LFKSKFSSQSQAKSSGSIRMASESNTVPSIVVYVTVPNKEEGKKLAESLVREKLAACVNR 120

Query: 121 VSGIESVYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGE 180
           V GIESVYQW+GE+QTDAEELLIIKTR+SLL AL +HVKANHPY+VPEVIALPI GGS  
Sbjct: 121 VPGIESVYQWQGEVQTDAEELLIIKTRESLLEALKEHVKANHPYDVPEVIALPITGGSTA 180

Query: 181 YLEWIKSSTKD 186
           YLEW+K+ST+D
Sbjct: 181 YLEWLKNSTRD 191

[Close]

BLAST of CmoCh05G005580 vs. TAIR10
Match: AT2G33740.2 (AT2G33740.2 Nitrogen regulatory PII-like, alpha/beta)

HSP 1 Score: 208.4 bits (529), Expect = 3.8e-54
Identity = 117/189 (61.90%), Postives = 145/189 (76.72%), Query Frame = 1


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLS-LGFSNLFVS---RTGSALSLPFAPLL 60
           MA +L +R++  + S    RR  P+VGAFCVLS L  S+L  S   ++G A S    PLL
Sbjct: 1   MASSLTTRLSAVIGS----RRSFPIVGAFCVLSTLSISSLSSSSPFKSGCAQSFSVVPLL 60

Query: 61  RSTFGSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVS 120
           RS F S+  + +   I+ME +S  VPSIVVYVTVPNREAGKKLA SIV+EKLAACVNIV 
Sbjct: 61  RSKFSSKAFSSS---IRMEESSKTVPSIVVYVTVPNREAGKKLANSIVQEKLAACVNIVP 120

Query: 121 GIESVYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYL 180
           GIESVY+W+G++Q+D+EELLIIKTRQSLL  LT+HV ANH Y+VPEVIALPI GGS +YL
Sbjct: 121 GIESVYEWEGKVQSDSEELLIIKTRQSLLEPLTEHVNANHEYDVPEVIALPITGGSDKYL 180

Query: 181 EWIKSSTKD 186
           EW+K+ST++
Sbjct: 181 EWLKNSTRN 182

[Close]

BLAST of CmoCh05G005580 vs. NCBI nr
Match: gi|449469805|ref|XP_004152609.1| (PREDICTED: protein CutA, chloroplastic [Cucumis sativus])

HSP 1 Score: 322.4 bits (825), Expect = 5.2e-85
Identity = 166/185 (89.73%), Postives = 171/185 (92.43%), Query Frame = 1


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF 60
           MAFTL SR ATPL++S  LRRRLPLVGAFCVLS G SNLFVS+TGSALSLPF PLLRS  
Sbjct: 1   MAFTLSSRAATPLITSFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSLPFVPLLRSKL 60

Query: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIES 120
             QGPARNVHLIKMEG+SAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK 180
           VYQWKGEIQ+D EELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS EYLEWIK
Sbjct: 121 VYQWKGEIQSDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of CmoCh05G005580 vs. NCBI nr
Match: gi|659088272|ref|XP_008444893.1| (PREDICTED: protein CutA, chloroplastic [Cucumis melo])

HSP 1 Score: 321.6 bits (823), Expect = 8.8e-85
Identity = 165/185 (89.19%), Postives = 170/185 (91.89%), Query Frame = 1


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVSRTGSALSLPFAPLLRSTF 60
           MAFTL SR ATPL+S   LRRRLPLVGAFCVLS G SNLFVS+TGSALS+PF PLLRS  
Sbjct: 1   MAFTLSSRAATPLISCFALRRRLPLVGAFCVLSFGISNLFVSKTGSALSVPFVPLLRSKL 60

Query: 61  GSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVSGIES 120
             QGPARNVHLIKMEG+SAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV GIES
Sbjct: 61  AGQGPARNVHLIKMEGSSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIVPGIES 120

Query: 121 VYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEYLEWIK 180
           +YQWKGEIQTD EELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGS EYLEWIK
Sbjct: 121 IYQWKGEIQTDPEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSLEYLEWIK 180

Query: 181 SSTKD 186
           SSTKD
Sbjct: 181 SSTKD 185

[Close]

BLAST of CmoCh05G005580 vs. NCBI nr
Match: gi|225459136|ref|XP_002285702.1| (PREDICTED: protein CutA, chloroplastic [Vitis vinifera])

HSP 1 Score: 259.2 bits (661), Expect = 5.4e-66
Identity = 136/190 (71.58%), Postives = 158/190 (83.16%), Query Frame = 1


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVS-----RTGSALSLPFAPL 60
           MA TLC + A+ ++SSS +RRRLPLVGAFC+LSLG SNL  +     +TG A SLPF P 
Sbjct: 1   MASTLCCK-ASSIVSSSAVRRRLPLVGAFCMLSLGLSNLCPALSSSLKTGCAQSLPFGPF 60

Query: 61  LRSTFGSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV 120
           LRS FG+Q PA++V  I+ME N   VPSIVVYVTVPN+EAGKKLAESIVKEKLAACVN V
Sbjct: 61  LRSKFGNQTPAKSVRSIRMEANQTTVPSIVVYVTVPNKEAGKKLAESIVKEKLAACVNRV 120

Query: 121 SGIESVYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEY 180
            GIESVY W+GEIQTD+EELLIIKTR+SLL ALT+HVKANH Y+VPEVIALPI GG+ +Y
Sbjct: 121 PGIESVYHWQGEIQTDSEELLIIKTRESLLEALTEHVKANHEYDVPEVIALPITGGNLQY 180

Query: 181 LEWIKSSTKD 186
           LEWIK+ST+D
Sbjct: 181 LEWIKNSTRD 189

[Close]

BLAST of CmoCh05G005580 vs. NCBI nr
Match: gi|590595884|ref|XP_007018181.1| (Nitrogen regulatory PII-like isoform 1 [Theobroma cacao])

HSP 1 Score: 258.1 bits (658), Expect = 1.2e-65
Identity = 137/192 (71.35%), Postives = 159/192 (82.81%), Query Frame = 1


Query: 1   MAFTLCSRVATPLLSSSVLRRRLPLVGAFCVLSLGFSNLFVS-------RTGSALSLPFA 60
           MA TL  R A+ L+SS+ +RRRLPLVGAFCVLSLGFSNL  +       +TG A SLPF 
Sbjct: 1   MASTLRCR-ASSLVSSTTIRRRLPLVGAFCVLSLGFSNLCPTLSSSSNFKTGCAQSLPFV 60

Query: 61  PLLRSTFGSQGPARNVHLIKMEGNSAAVPSIVVYVTVPNREAGKKLAESIVKEKLAACVN 120
           PLLRS F +Q P + VH +KMEG+S  VPSIVVYVTVPNREAG+KLAESIVKEKLAACVN
Sbjct: 61  PLLRSKFSTQLPDKPVHAVKMEGSSNTVPSIVVYVTVPNREAGRKLAESIVKEKLAACVN 120

Query: 121 IVSGIESVYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSG 180
           IV G+ESVY+W+G+I +D EELLIIKTRQSLL ALT+HVKANH Y+VPEVIALPI GGS 
Sbjct: 121 IVPGLESVYEWEGKINSDPEELLIIKTRQSLLEALTEHVKANHEYDVPEVIALPITGGSP 180

Query: 181 EYLEWIKSSTKD 186
           +YLEW+K+ST+D
Sbjct: 181 QYLEWLKNSTRD 191

[Close]

BLAST of CmoCh05G005580 vs. NCBI nr
Match: gi|1009137516|ref|XP_015886094.1| (PREDICTED: protein CutA, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 256.1 bits (653), Expect = 4.6e-65
Identity = 139/190 (73.16%), Postives = 156/190 (82.11%), Query Frame = 1


Query: 1   MAFTLCSRVA--TPLLSSSVLRRRLPLVGAFCVLSLGFSNLFV--SRTGSALSLPFAPLL 60
           MA TLCSR    +P+LSSS LRRRLPLVGAFC+LS G SNL+   S+TGS  SLPF PLL
Sbjct: 1   MAATLCSRARAPSPILSSSTLRRRLPLVGAFCMLSFGLSNLWPISSKTGSVQSLPFGPLL 60

Query: 61  RSTFGSQGPARNVHLIKMEGNSAA-VPSIVVYVTVPNREAGKKLAESIVKEKLAACVNIV 120
           RS F SQ  A +   IKMEG S + VPSIVVYVTVPN+E GKKLA SIV EKLAACVN V
Sbjct: 61  RSKFSSQASANS---IKMEGGSGSTVPSIVVYVTVPNKEVGKKLAGSIVNEKLAACVNRV 120

Query: 121 SGIESVYQWKGEIQTDAEELLIIKTRQSLLGALTDHVKANHPYEVPEVIALPINGGSGEY 180
            G+ESVY W+GE+QTD+EELLIIKTRQSLL ALT HVKANHPY+VPEVIALPINGGS +Y
Sbjct: 121 PGVESVYLWEGEVQTDSEELLIIKTRQSLLDALTQHVKANHPYDVPEVIALPINGGSLQY 180

Query: 181 LEWIKSSTKD 186
           LEW+K+ST+D
Sbjct: 181 LEWLKNSTRD 187

The following BLAST results are available for this feature:

BLAST of CmoCh05G005580 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CUTA_ARATH	6.8e-53	61.90	Protein CutA, chloroplastic OS=Arabidopsis thaliana GN=CUTA PE=1 SV=1	[more]
CUTA1_ORYSJ	8.1e-46	58.72	Protein CutA 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CUTA1 PE=1 SV=1	[more]
CUTA_HUMAN	3.5e-25	39.13	Protein CutA OS=Homo sapiens GN=CUTA PE=1 SV=2	[more]
CUTA_BOVIN	7.9e-25	43.13	Protein CutA OS=Bos taurus GN=CUTA PE=1 SV=1	[more]
CUTA_RAT	3.9e-24	47.71	Protein CutA OS=Rattus norvegicus GN=Cuta PE=1 SV=2	[more]

BLAST of CmoCh05G005580 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRU0_CUCSA	3.6e-85	89.73	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G370360 PE=4 SV=1	[more]
F6H112_VITVI	3.7e-66	71.58	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g07230 PE=4 SV=...	[more]
A0A061FEB3_THECC	8.4e-66	71.35	Nitrogen regulatory PII-like isoform 1 OS=Theobroma cacao GN=TCM_034480 PE=4 SV=...	[more]
A0A067L2J3_JATCU	7.8e-64	72.11	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15865 PE=4 SV=1	[more]
W9SDS0_9ROSA	1.3e-63	69.11	Protein CutA OS=Morus notabilis GN=L484_000757 PE=4 SV=1	[more]

BLAST of CmoCh05G005580 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G33740.2	3.8e-54	61.90	Nitrogen regulatory PII-like, alpha/beta	[more]

BLAST of CmoCh05G005580 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449469805\|ref\|XP_004152609.1\|	5.2e-85	89.73	PREDICTED: protein CutA, chloroplastic [Cucumis sativus]	[more]
gi\|659088272\|ref\|XP_008444893.1\|	8.8e-85	89.19	PREDICTED: protein CutA, chloroplastic [Cucumis melo]	[more]
gi\|225459136\|ref\|XP_002285702.1\|	5.4e-66	71.58	PREDICTED: protein CutA, chloroplastic [Vitis vinifera]	[more]
gi\|590595884\|ref\|XP_007018181.1\|	1.2e-65	71.35	Nitrogen regulatory PII-like isoform 1 [Theobroma cacao]	[more]
gi\|1009137516\|ref\|XP_015886094.1\|	4.6e-65	73.16	PREDICTED: protein CutA, chloroplastic [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004323	Ion_tolerance_CutA
IPR011322	N-reg_PII-like_a/b

Vocabulary: **Biological Process**
Term	Definition
GO:0010038	response to metal ion

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048573	photoperiodism, flowering
biological_process	GO:0010038	response to metal ion
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh05G005580.1	CmoCh05G005580.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004323	Divalent ion tolerance protein, CutA	PANTHER	PTHR23419	DIVALENT CATION TOLERANCE CUTA-RELATED	coord: 20..185 score: 1.1
IPR004323	Divalent ion tolerance protein, CutA	PFAM	PF03091	CutA1	coord: 84..181 score: 1.4
IPR011322	Nitrogen regulatory PII-like, alpha/beta	unknown	SSF54913	GlnB-like	coord: 83..184 score: 4.45
None	No IPR available	GENE3D	G3DSA:3.30.70.830		coord: 77..184 score: 3.9
None	No IPR available	PANTHER	PTHR23419:SF0	PROTEIN F35G12.7	coord: 20..185 score: 1.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh05G005580	Cucsa.160460	Cucumber (Gy14) v1	cgycmoB0461
CmoCh05G005580	CmaCh05G005310	Cucurbita maxima (Rimu)	cmacmoB786
CmoCh05G005580	Cla022136	Watermelon (97103) v1	cmowmB746
CmoCh05G005580	Csa2G370360	Cucumber (Chinese Long) v2	cmocuB778
CmoCh05G005580	MELO3C011069	Melon (DHL92) v3.5.1	cmomeB719
CmoCh05G005580	ClCG08G011520	Watermelon (Charleston Gray)	cmowcgB713
CmoCh05G005580	CSPI02G21460	Wild cucumber (PI 183967)	cmocpiB783
CmoCh05G005580	Lsi08G010080	Bottle gourd (USVL1VR-Ls)	cmolsiB728
CmoCh05G005580	Cp4.1LG11g04600	Cucurbita pepo (Zucchini)	cmocpeB720
CmoCh05G005580	MELO3C011069.2	Melon (DHL92) v3.6.1	cmomedB816
CmoCh05G005580	CsaV3_2G030110	Cucumber (Chinese Long) v3	cmocucB0919
CmoCh05G005580	Cla97C08G154540	Watermelon (97103) v2	cmowmbB800
CmoCh05G005580	CsGy2G021200	Cucumber (Gy14) v2	cgybcmoB239
CmoCh05G005580	Carg08222	Silver-seed gourd	carcmoB0087

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh05G005580	Cucumber (Chinese Long) v3	cmocucB0929
CmoCh05G005580	Cucumber (Chinese Long) v3	cmocucB0942
CmoCh05G005580	Watermelon (97103) v2	cmowmbB775
CmoCh05G005580	Watermelon (97103) v2	cmowmbB779
CmoCh05G005580	Wax gourd	cmowgoB0950
CmoCh05G005580	Wax gourd	cmowgoB0954
CmoCh05G005580	Wax gourd	cmowgoB0961
CmoCh05G005580	Cucurbita moschata (Rifu)	cmocmoB031
CmoCh05G005580	Cucurbita moschata (Rifu)	cmocmoB158
CmoCh05G005580	Cucurbita moschata (Rifu)	cmocmoB452
CmoCh05G005580	Cucumber (Gy14) v1	cgycmoB0230
CmoCh05G005580	Cucumber (Gy14) v1	cgycmoB0872
CmoCh05G005580	Cucurbita maxima (Rimu)	cmacmoB200
CmoCh05G005580	Cucurbita maxima (Rimu)	cmacmoB060
CmoCh05G005580	Cucurbita maxima (Rimu)	cmacmoB661
CmoCh05G005580	Cucurbita maxima (Rimu)	cmacmoB870
CmoCh05G005580	Wild cucumber (PI 183967)	cmocpiB792
CmoCh05G005580	Wild cucumber (PI 183967)	cmocpiB804
CmoCh05G005580	Cucumber (Chinese Long) v2	cmocuB789
CmoCh05G005580	Cucumber (Chinese Long) v2	cmocuB799
CmoCh05G005580	Melon (DHL92) v3.5.1	cmomeB722
CmoCh05G005580	Melon (DHL92) v3.5.1	cmomeB733
CmoCh05G005580	Watermelon (Charleston Gray)	cmowcgB691
CmoCh05G005580	Watermelon (Charleston Gray)	cmowcgB698
CmoCh05G005580	Watermelon (97103) v1	cmowmB755
CmoCh05G005580	Watermelon (97103) v1	cmowmB761
CmoCh05G005580	Cucurbita pepo (Zucchini)	cmocpeB719
CmoCh05G005580	Cucurbita pepo (Zucchini)	cmocpeB739
CmoCh05G005580	Cucurbita pepo (Zucchini)	cmocpeB752
CmoCh05G005580	Bottle gourd (USVL1VR-Ls)	cmolsiB707
CmoCh05G005580	Bottle gourd (USVL1VR-Ls)	cmolsiB718
CmoCh05G005580	Cucumber (Gy14) v2	cgybcmoB398
CmoCh05G005580	Cucumber (Gy14) v2	cgybcmoB829
CmoCh05G005580	Melon (DHL92) v3.6.1	cmomedB820
CmoCh05G005580	Melon (DHL92) v3.6.1	cmomedB830
CmoCh05G005580	Silver-seed gourd	carcmoB0552
CmoCh05G005580	Silver-seed gourd	carcmoB0877
CmoCh05G005580	Silver-seed gourd	carcmoB1112