MELO3C010429.2 (gene) Melon (DHL92) v3.6.1

NameMELO3C010429.2
Typegene
OrganismCucumis melo (Melon (DHL92) v3.6.1)
DescriptionPentatricopeptide repeat-containing protein At4g35130, chloroplastic
Locationchr04 : 24085848 .. 24086424 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGATCGAACAACGCAAGACTTCGTGATGTAGTAGATGATCCACAACAAGTCCTTGATATGTGTAATAATAATGAGAGGTAGATGGAGGAGATACATAATATGTACGATCTACCTATTGTACCTCTACCAATTCATAGGGGACGTGTTTGAGTGGAAGAAGTTGAACTCGATAAAGTTTACCATAATGTGGAAGAAGTGCCTCCTACGACACAAACACAGAGCCACGGTATGCTCACGGTATGCTCAAACTGGTTATGGTAGTCCGATGACAATGATGCCAACATTTGGAGCAGGATATTGTGATTCTAAGATCGGTACAGGATATTATGATGCAGGGGTCGGTCCATCGTCTTCATACATGGATGTCGATCCATCAACTTCTTATATGCATGGACACGGACGTGGCTATGGAAAACATAACGAATATCTGTATCATGAAGCACCTGCAGATGTATCAGATCGACAAGAGTACCAACAAGAACCAGAGAACCAAGAGGACCGAGAACAACATAGAGTTCAGGATCGATGTCGACAACCAGCTCGAAATTGACGATGTTCGGGTTGTGGAACACATTGA

mRNA sequence

AGATCGAACAACGCAAGACTTCGTGATGTAGTAGATGATCCACAACAAGTCCTTGATATGTGTAATAATAATGAGAGGTAGATGGAGGAGATACATAATATGTACGATCTACCTATTGTACCTCTACCAATTCATAGGGGACGTGTTTGAGTGGAAGAAGTTGAACTCGATAAAGTTTACCATAATGTGGAAGAAGTGCCTCCTACGACACAAACACAGAGCCACGGTATGCTCACGGGGTCGGTCCATCGTCTTCATACATGGATGTCGATCCATCAACTTCTTATATGCATGGACACGGACGTGGCTATGGAAAACATAACGAATATCTGTATCATGAAGCACCTGCAGATGTATCAGATCGACAAGAGTACCAACAAGAACCAGAGAACCAAGAGGACCGAGAACAACATAGAGTTCAGGATCGATGTCGACAACCAGCTCGAAATTGACGATGTTCGGGTTGTGGAACACATTGA

Coding sequence (CDS)

ATGATCCACAACAAGTCCTTGATATGTGTAATAATAATGAGAGGTAGATGGAGGAGATACATAATATGTACGATCTACCTATTGTACCTCTACCAATTCATAGGGGACGTGTTTGAGTGGAAGAAGTTGAACTCGATAAAGTTTACCATAATGTGGAAGAAGTGCCTCCTACGACACAAACACAGAGCCACGGTATGCTCACGGGGTCGGTCCATCGTCTTCATACATGGATGTCGATCCATCAACTTCTTATATGCATGGACACGGACGTGGCTATGGAAAACATAA

Protein sequence

MIHNKSLICVIIMRGRWRRYIICTIYLLYLYQFIGDVFEWKKLNSIKFTIMWKKCLLRHKHRATVCSRGRSIVFIHGCRSINFLYAWTRTWLWKT
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0009451 RNA modification
cellular_component GO:0009507 chloroplast
cellular_component GO:0043231 intracellular membrane-bounded organelle
cellular_component GO:0009536 plastid
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO3C010429.2.1MELO3C010429.2.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
MELO3C010429.2Wax gourdmedwgoB375
MELO3C010429.2Wax gourdmedwgoB442
MELO3C010429.2Cucumber (Gy14) v2cgybmedB173
MELO3C010429.2Cucumber (Gy14) v2cgybmedB485
MELO3C010429.2Cucumber (Gy14) v1cgymedB203
MELO3C010429.2Cucurbita maxima (Rimu)cmamedB257
MELO3C010429.2Cucurbita maxima (Rimu)cmamedB387
MELO3C010429.2Cucurbita maxima (Rimu)cmamedB489
MELO3C010429.2Cucurbita maxima (Rimu)cmamedB943
MELO3C010429.2Cucurbita moschata (Rifu)cmomedB239
MELO3C010429.2Cucurbita moschata (Rifu)cmomedB374
MELO3C010429.2Cucurbita moschata (Rifu)cmomedB476
MELO3C010429.2Cucurbita moschata (Rifu)cmomedB932
MELO3C010429.2Cucurbita pepo (Zucchini)cpemedB160
MELO3C010429.2Cucurbita pepo (Zucchini)cpemedB360
MELO3C010429.2Cucurbita pepo (Zucchini)cpemedB615
MELO3C010429.2Cucurbita pepo (Zucchini)cpemedB673
MELO3C010429.2Wild cucumber (PI 183967)cpimedB193
MELO3C010429.2Wild cucumber (PI 183967)cpimedB544
MELO3C010429.2Cucumber (Chinese Long) v2cumedB193
MELO3C010429.2Cucumber (Chinese Long) v2cumedB528
MELO3C010429.2Melon (DHL92) v3.6.1medmedB084
MELO3C010429.2Bottle gourd (USVL1VR-Ls)lsimedB221
MELO3C010429.2Bottle gourd (USVL1VR-Ls)lsimedB273
MELO3C010429.2Watermelon (Charleston Gray)medwcgB308
MELO3C010429.2Watermelon (Charleston Gray)medwcgB309
MELO3C010429.2Watermelon (97103) v1medwmB338
MELO3C010429.2Watermelon (97103) v1medwmB344
MELO3C010429.2Silver-seed gourdcarmedB0365
MELO3C010429.2Silver-seed gourdcarmedB0460
MELO3C010429.2Silver-seed gourdcarmedB0770
MELO3C010429.2Silver-seed gourdcarmedB0822
MELO3C010429.2Cucumber (Chinese Long) v3cucmedB198
MELO3C010429.2Cucumber (Chinese Long) v3cucmedB556
MELO3C010429.2Watermelon (97103) v2medwmbB305
MELO3C010429.2Watermelon (97103) v2medwmbB352